Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/processes/electromagnetic/dna/models/include/G4DNARuddIonisationExtendedModel.hh

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

Diff markup

Differences between /processes/electromagnetic/dna/models/include/G4DNARuddIonisationExtendedModel.hh (Version 11.3.0) and /processes/electromagnetic/dna/models/include/G4DNARuddIonisationExtendedModel.hh (Version 11.0)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 // Created by Z. Francis, S. Incerti 2010      << 
 27 //                                             << 
 28 // Modified for inverse rudd function sampling << 
 29 // Rewitten by V.Ivanchenko 21.05.2023         << 
 30 //                                                 26 //
 31                                                    27 
 32 #ifndef G4DNARuddIonisationExtendedModel_h         28 #ifndef G4DNARuddIonisationExtendedModel_h
 33 #define G4DNARuddIonisationExtendedModel_h 1       29 #define G4DNARuddIonisationExtendedModel_h 1
 34                                                    30 
 35 #include "G4VEmModel.hh"                           31 #include "G4VEmModel.hh"
 36 #include "G4ParticleChangeForGamma.hh"             32 #include "G4ParticleChangeForGamma.hh"
 37 #include "G4ProductionCutsTable.hh"                33 #include "G4ProductionCutsTable.hh"
 38                                                    34 
 39 #include "G4EmCorrections.hh"                  << 
 40 #include "G4DNAGenericIonsManager.hh"              35 #include "G4DNAGenericIonsManager.hh"
 41 #include "G4DNACrossSectionDataSet.hh"             36 #include "G4DNACrossSectionDataSet.hh"
 42 #include "G4Electron.hh"                           37 #include "G4Electron.hh"
 43 #include "G4Proton.hh"                             38 #include "G4Proton.hh"
 44 #include "G4LogLogInterpolation.hh"                39 #include "G4LogLogInterpolation.hh"
 45                                                    40 
 46 #include "G4DNAWaterIonisationStructure.hh"        41 #include "G4DNAWaterIonisationStructure.hh"
 47 #include "G4VAtomDeexcitation.hh"                  42 #include "G4VAtomDeexcitation.hh"
 48 #include "G4NistManager.hh"                        43 #include "G4NistManager.hh"
 49 #include <vector>                              << 
 50                                                    44 
 51 class G4DNARuddIonisationExtendedModel : publi     45 class G4DNARuddIonisationExtendedModel : public G4VEmModel
 52 {                                                  46 {
                                                   >>  47 
 53 public:                                            48 public:
 54                                                    49 
 55   explicit G4DNARuddIonisationExtendedModel(co <<  50   G4DNARuddIonisationExtendedModel(const G4ParticleDefinition* p = 0, 
 56                const G4String& nam = "DNARuddI     51                const G4String& nam = "DNARuddIonisationExtendedModel");
 57                                                    52 
 58   ~G4DNARuddIonisationExtendedModel() override <<  53   virtual ~G4DNARuddIonisationExtendedModel();
 59                                                    54 
 60   void Initialise(const G4ParticleDefinition*, <<  55   virtual void Initialise(const G4ParticleDefinition*, const G4DataVector&);
 61                                                    56 
 62   G4double CrossSectionPerVolume(const G4Mater <<  57   virtual G4double CrossSectionPerVolume(  const G4Material* material,
 63                                  const G4Parti <<  58              const G4ParticleDefinition* p,
 64          G4double ekin,                        <<  59              G4double ekin,
 65          G4double emin,                        <<  60              G4double emin,
 66          G4double emax) override;              <<  61              G4double emax);
 67                                                <<  62 
 68   void SampleSecondaries(std::vector<G4Dynamic <<  63   virtual void SampleSecondaries(std::vector<G4DynamicParticle*>*,
 69        const G4MaterialCutsCouple*,            <<  64          const G4MaterialCutsCouple*,
 70        const G4DynamicParticle*,               <<  65          const G4DynamicParticle*,
 71        G4double tmin,                          <<  66          G4double tmin,
 72        G4double maxEnergy) override;           <<  67          G4double maxEnergy);
 73                                                << 
 74   void SelectStationary(G4bool val) { statCode << 
 75                                                << 
 76   // method for unit tests                     << 
 77   G4double ComputeProbabilityFunction(const G4 << 
 78                                       G4double << 
 79                                                << 
 80   G4DNARuddIonisationExtendedModel & operator= << 
 81   (const  G4DNARuddIonisationExtendedModel &ri << 
 82   G4DNARuddIonisationExtendedModel(const G4DNA << 
 83                                                    68 
 84 private:                                       <<  69   inline void SelectStationary(G4bool input); 
 85                                                    70 
 86   void LoadData();                             <<  71 protected:
 87                                                << 
 88   void SetParticle(const G4ParticleDefinition* << 
 89                                                << 
 90   G4int SelectShell(G4double energy);          << 
 91                                                    72 
 92   G4double MaxEnergy(G4double kine, G4int shel <<  73   G4ParticleChangeForGamma* fParticleChangeForGamma;
 93                                                    74 
 94   G4double SampleElectronEnergy(G4double kine, <<  75 private:
 95                                                    76 
 96   G4double ProbabilityFunction(G4double kine,  <<  77   G4bool statCode;
 97                                                    78 
 98   G4double S_1s(G4double t,                    <<  79   // Water density table
 99     G4double energyTransferred,                <<  80   const std::vector<G4double>* fpWaterDensity;
100     G4double slaterEffectiveChg,               << 
101     G4double shellNumber);                     << 
102                                                    81 
103   G4double S_2s(G4double t,                    <<  82   //deexcitation manager to produce fluo photns and e-
104     G4double energyTransferred,                <<  83   G4VAtomDeexcitation*      fAtomDeexcitation;
105     G4double slaterEffectiveChg,               << 
106     G4double shellNumber);                     << 
107                                                    84 
                                                   >>  85   std::map<G4String,G4double,std::less<G4String> > lowEnergyLimit;
                                                   >>  86   std::map<G4String,G4double,std::less<G4String> > highEnergyLimit;
                                                   >>  87   
                                                   >>  88   // ZF: 26-10-2010
                                                   >>  89   std::map<G4double,G4double> lowEnergyLimitForA, lowEnergyLimitOfModelForA, killBelowEnergyForA;
108                                                    90 
109   G4double S_2p(G4double t,                    <<  91   G4bool isInitialised;
110     G4double energyTransferred,                <<  92   G4int verboseLevel;
111     G4double slaterEffectiveChg,               <<  93   
112     G4double shellNumber);                     <<  94   // Cross section
113                                                    95 
114   G4double Rh(G4double t,                      <<  96   typedef std::map<G4String,G4String,std::less<G4String> > MapFile;
115         G4double energyTransferred,            <<  97   MapFile tableFile;
116         G4double slaterEffectiveChg,           << 
117         G4double shellNumber);                 << 
118                                                    98 
119   G4double CorrectionFactor(G4double kine, G4i <<  99   typedef std::map<G4String,G4DNACrossSectionDataSet*,std::less<G4String> > MapData;
                                                   >> 100   MapData tableData;
                                                   >> 101   
                                                   >> 102   // Final state
                                                   >> 103   
                                                   >> 104   G4DNAWaterIonisationStructure waterStructure;
120                                                   105 
121 protected:                                     << 106   G4double RandomizeEjectedElectronEnergy(G4ParticleDefinition* particleDefinition, 
                                                   >> 107             G4double incomingParticleEnergy, 
                                                   >> 108             G4int shell);
                                                   >> 109 
                                                   >> 110   // SI: Not necessary anymore since we now use interface to angle generator
                                                   >> 111   /*
                                                   >> 112   void RandomizeEjectedElectronDirection(G4ParticleDefinition* particleDefinition, 
                                                   >> 113            G4double incomingParticleEnergy, 
                                                   >> 114            G4double outgoingParticleEnergy, 
                                                   >> 115            G4double & cosTheta, 
                                                   >> 116            G4double & phi, G4int shell);
                                                   >> 117   */
                                                   >> 118 
                                                   >> 119   G4double RejectionFunction(G4ParticleDefinition* particle, 
                                                   >> 120                     G4double k, 
                                                   >> 121                     G4double proposed_ws, 
                                                   >> 122                     G4int ionizationLevelIndex);
                                                   >> 123 
                                                   >> 124   G4double ProposedSampledEnergy(G4ParticleDefinition* particle, 
                                                   >> 125                     G4double k,  
                                                   >> 126                     G4int ionizationLevelIndex);
                                                   >> 127    
                                                   >> 128   G4double CorrectionFactor(G4ParticleDefinition* particleDefinition, G4double k, G4int shell);
                                                   >> 129 
                                                   >> 130   G4double S_1s(G4double t, 
                                                   >> 131     G4double energyTransferred, 
                                                   >> 132     G4double slaterEffectiveChg, 
                                                   >> 133     G4double shellNumber);
122                                                   134 
123   G4ParticleChangeForGamma* fParticleChangeFor << 135   G4double S_2s(G4double t, 
                                                   >> 136     G4double energyTransferred, 
                                                   >> 137     G4double slaterEffectiveChg, 
                                                   >> 138     G4double shellNumber);
124                                                   139 
125 private:                                       << 
126                                                   140 
127   // idx = 0 - hydrogen                        << 141   G4double S_2p(G4double t, 
128   // idx = 1 - proton                          << 142     G4double energyTransferred, 
129   // idx = 2%26 - ions idx=Z                   << 143     G4double slaterEffectiveChg, 
130   // idx = -1 - alpha+                         << 144     G4double shellNumber);
131   // idx = -1 - helium                         << 
132   static const G4int RUDDZMAX = 27;            << 
133   static G4DNACrossSectionDataSet* xsdata[RUDD << 
134   static G4DNACrossSectionDataSet* xsalphaplus << 
135   static G4DNACrossSectionDataSet* xshelium;   << 
136                                                   145 
137   // Water density table                       << 146   G4double R(G4double t, 
138   static const std::vector<G4double>* fpWaterD << 147        G4double energyTransferred, 
                                                   >> 148        G4double slaterEffectiveChg, 
                                                   >> 149        G4double shellNumber) ;
139                                                   150 
140   G4DNACrossSectionDataSet* xscurrent{nullptr} << 151   G4double slaterEffectiveCharge[3];
141   const G4ParticleDefinition* fParticle{nullpt << 152   G4double sCoefficient[3];
142   G4EmCorrections* fEmCorrections;             << 153   
143   G4Pow* fGpow;                                << 154   // Partial cross section
144                                                << 155   
145   //deexcitation manager to produce fluo photo << 156   G4double PartialCrossSection(const G4Track& track);
146   G4VAtomDeexcitation* fAtomDeexcitation{nullp << 157       
147                                                << 158   G4double Sum(G4double energy, const G4String& particle);
148   // tracking cut and low-energy limit of prot << 159 
149   G4double fLowestEnergy;                      << 160   G4int RandomSelect(G4double energy,const G4String& particle );
150   // scaled low-energy limit of ion x-section  << 161    
151   G4double fLimitEnergy;                       << 162   //
152                                                << 163    
153   G4double fMass{0.0};                         << 164   G4DNARuddIonisationExtendedModel & operator=(const  G4DNARuddIonisationExtendedModel &right);
154   G4double fMassRate{1.0};                     << 165   G4DNARuddIonisationExtendedModel(const  G4DNARuddIonisationExtendedModel&);
155   G4double fElow{0.0};                         << 
156                                                << 
157   G4double F1{0.0};                            << 
158   G4double F2{0.0};                            << 
159   G4double alphaConst{0.0};                    << 
160   G4double bEnergy{0.0};                       << 
161   G4double u{0.0};                             << 
162   G4double v{0.0};                             << 
163   G4double wc{0.0};                            << 
164                                                << 
165   G4double slaterEffectiveCharge[3] = {0.0};   << 
166   G4double sCoefficient[3] = {0.0};            << 
167   G4double fTemp[5] = {0.0};                   << 
168                                                << 
169   G4int idx{-1};                               << 
170   G4int verbose{0};                            << 
171                                                << 
172   G4bool isInitialised{false};                 << 
173   G4bool isIon{false};                         << 
174   G4bool isFirst{false};                       << 
175   G4bool isHelium{false};                      << 
176   G4bool statCode{false};                      << 
177   G4bool useDNAWaterStructure{true};           << 
178                                                   166 
179   // energy levels of water molecule           << 
180   G4DNAWaterIonisationStructure waterStructure << 
181 };                                                167 };
                                                   >> 168 
                                                   >> 169 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
                                                   >> 170 
                                                   >> 171 inline void G4DNARuddIonisationExtendedModel::SelectStationary (G4bool input)
                                                   >> 172 { 
                                                   >> 173     statCode = input; 
                                                   >> 174 }    
182                                                   175 
183 //....oooOO0OOooo........oooOO0OOooo........oo    176 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
184                                                   177 
185 #endif                                            178 #endif
186                                                   179