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>> 26 // $Id: G4DNAMolecularReaction.hh 64057 2012-10-30 15:04:49Z gcosmo $
26 // 27 //
27 // Author: Mathieu Karamitros << 28 // Author: Mathieu Karamitros (kara@cenbg.in2p3.fr)
28 <<
29 // The code is developed in the framework of t <<
30 // <<
31 // We would be very happy hearing from you, se <<
32 // <<
33 // In order for Geant4-DNA to be maintained an <<
34 // article citations are crucial. <<
35 // If you use Geant4-DNA chemistry and you pub <<
36 // in addition to the general paper on Geant4- <<
37 // 29 //
38 // Int. J. Model. Simul. Sci. Comput. 1 (2010) << 30 // WARNING : This class is released as a prototype.
>> 31 // It might strongly evolve or even disapear in the next releases.
39 // 32 //
40 // we would be very happy if you could please << 33 // History:
41 // reference papers on chemistry: << 34 // -----------
>> 35 // 10 Oct 2011 M.Karamitros created
42 // 36 //
43 // J. Comput. Phys. 274 (2014) 841-882 << 37 // -------------------------------------------------------------------
44 // Prog. Nucl. Sci. Tec. 2 (2011) 503-508 <<
45 38
46 << 39 #ifndef G4MOLECULARREACTION_H
47 #pragma once << 40 #define G4MOLECULARREACTION_H
48 41
49 #include <G4VITReactionProcess.hh> 42 #include <G4VITReactionProcess.hh>
50 #include <vector> <<
51 43
52 class G4DNAMolecularReactionTable; 44 class G4DNAMolecularReactionTable;
53 class G4VDNAReactionModel; 45 class G4VDNAReactionModel;
54 class G4ITReactionSet; <<
55 46
56 /** 47 /**
57 * G4DNAMolecularReaction is the reaction pro 48 * G4DNAMolecularReaction is the reaction process
58 * used in G4DNAMolecularStepByStepModel. << 49 * used in G4DNAMolecularStepByStepModel between
59 * It test whether molecules can react after << 50 * two molecules.
60 * If so, the reaction is made. << 51 * After the global track steps, it test whether
61 * \deprecated This class will be removed << 52 * the molecules can react. If so, the reaction is made.
62 */ 53 */
>> 54
63 class G4DNAMolecularReaction : public G4VITRea 55 class G4DNAMolecularReaction : public G4VITReactionProcess
64 { 56 {
65 public: << 57 public:
66 G4DNAMolecularReaction(); << 58 /** Default constructor */
67 explicit G4DNAMolecularReaction(G4VDNAReac << 59 G4DNAMolecularReaction();
68 ~G4DNAMolecularReaction() override = defau << 60 /** Default destructor */
69 G4DNAMolecularReaction(const G4DNAMolecula << 61 virtual ~G4DNAMolecularReaction();
70 G4DNAMolecularReaction& operator=(const G4 << 62 /** Copy constructor
71 << 63 * \param other Object to copy from
72 G4bool TestReactibility(const G4Track&, << 64 */
73 const G4Track&, << 65 G4DNAMolecularReaction(const G4DNAMolecularReaction& other);
74 double currentStep << 66 /** Assignment operator
75 bool userStepTimeL << 67 * \param other Object to assign from
76 << 68 * \return A reference to this
77 std::vector<std::unique_ptr<G4ITReactionCh << 69 */
78 const double, const double, const bool << 70 G4DNAMolecularReaction& operator=(const G4DNAMolecularReaction& other);
79 std::unique_ptr<G4ITReactionChange> MakeRe << 71
80 << 72 G4IT_ADD_CLONE(G4VITReactionProcess, G4DNAMolecularReaction)
81 void SetReactionModel(G4VDNAReactionModel* << 73
82 << 74 /** Given two tracks, it tells you whether they can react
83 protected: << 75 */
84 const G4DNAMolecularReactionTable*& fMolRe << 76 virtual G4bool TestReactibility(const G4Track&,
85 G4VDNAReactionModel* fpReactionModel; << 77 const G4Track&,
>> 78 const double currentStepTime,
>> 79 const double previousStepTime,
>> 80 bool userStepTimeLimit) /*const*/ ;
>> 81
>> 82 /** Will generate the products of the two given tracks
>> 83 */
>> 84 virtual G4ITReactionChange* MakeReaction(const G4Track&, const G4Track&) ;
>> 85
>> 86 inline void SetReactionModel(G4VDNAReactionModel*);
>> 87 inline void SetReactionTable(const G4DNAMolecularReactionTable*);
>> 88
>> 89 inline void SetVerbose(int);
>> 90 // 1 : only when make reaction is called
>> 91 // 2 : both make reaction + test reactibility are called
>> 92
>> 93 protected:
>> 94 const G4DNAMolecularReactionTable*& fMolReactionTable;
>> 95 G4VDNAReactionModel* fReactionModel;
>> 96 G4int fVerbose;
>> 97 G4double fReactionRadius ;
>> 98 G4double fDistance;
>> 99 private:
86 }; 100 };
>> 101
>> 102 inline void G4DNAMolecularReaction::SetReactionModel(G4VDNAReactionModel* model)
>> 103 {
>> 104 fReactionModel = model;
>> 105 }
>> 106
>> 107 inline void G4DNAMolecularReaction::SetVerbose(int verb)
>> 108 {
>> 109 fVerbose = verb;
>> 110 }
>> 111
>> 112 #endif // G4MOLECULARREACTION_H
87 113