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25 // 25 //
26 // 26 //
27 // Author: Mathieu Karamitros << 27 // Author: Mathieu Karamitros (kara@cenbg.in2p3.fr)
28 <<
29 // The code is developed in the framework of t <<
30 // <<
31 // We would be very happy hearing from you, se <<
32 // <<
33 // In order for Geant4-DNA to be maintained an <<
34 // article citations are crucial. <<
35 // If you use Geant4-DNA chemistry and you pub <<
36 // in addition to the general paper on Geant4- <<
37 // 28 //
38 // Int. J. Model. Simul. Sci. Comput. 1 (2010) << 29 // WARNING : This class is released as a prototype.
>> 30 // It might strongly evolve or even disapear in the next releases.
39 // 31 //
40 // we would be very happy if you could please << 32 // History:
41 // reference papers on chemistry: << 33 // -----------
>> 34 // 10 Oct 2011 M.Karamitros created
42 // 35 //
43 // J. Comput. Phys. 274 (2014) 841-882 << 36 // -------------------------------------------------------------------
44 // Prog. Nucl. Sci. Tec. 2 (2011) 503-508 <<
45 37
46 << 38 #ifndef G4MOLECULARREACTION_H
47 #pragma once << 39 #define G4MOLECULARREACTION_H
48 40
49 #include <G4VITReactionProcess.hh> 41 #include <G4VITReactionProcess.hh>
50 #include <vector> <<
51 42
52 class G4DNAMolecularReactionTable; 43 class G4DNAMolecularReactionTable;
53 class G4VDNAReactionModel; 44 class G4VDNAReactionModel;
54 class G4ITReactionSet; <<
55 45
56 /** 46 /**
57 * G4DNAMolecularReaction is the reaction pro 47 * G4DNAMolecularReaction is the reaction process
58 * used in G4DNAMolecularStepByStepModel. << 48 * used in G4DNAMolecularStepByStepModel between
59 * It test whether molecules can react after << 49 * two molecules.
60 * If so, the reaction is made. << 50 * After the global track steps, it test whether
61 * \deprecated This class will be removed << 51 * the molecules can react. If so, the reaction is made.
62 */ 52 */
>> 53
63 class G4DNAMolecularReaction : public G4VITRea 54 class G4DNAMolecularReaction : public G4VITReactionProcess
64 { 55 {
65 public: << 56 public:
66 G4DNAMolecularReaction(); << 57 /** Default constructor */
67 explicit G4DNAMolecularReaction(G4VDNAReac << 58 G4DNAMolecularReaction();
68 ~G4DNAMolecularReaction() override = defau << 59 /** Default destructor */
69 G4DNAMolecularReaction(const G4DNAMolecula << 60 virtual ~G4DNAMolecularReaction();
70 G4DNAMolecularReaction& operator=(const G4 << 61 /** Copy constructor
71 << 62 * \param other Object to copy from
72 G4bool TestReactibility(const G4Track&, << 63 */
73 const G4Track&, << 64 G4DNAMolecularReaction(const G4DNAMolecularReaction& other);
74 double currentStep << 65 /** Assignment operator
75 bool userStepTimeL << 66 * \param other Object to assign from
76 << 67 * \return A reference to this
77 std::vector<std::unique_ptr<G4ITReactionCh << 68 */
78 const double, const double, const bool << 69 G4DNAMolecularReaction& operator=(const G4DNAMolecularReaction& other);
79 std::unique_ptr<G4ITReactionChange> MakeRe << 70
80 << 71 G4IT_ADD_CLONE(G4VITReactionProcess, G4DNAMolecularReaction)
81 void SetReactionModel(G4VDNAReactionModel* << 72
82 << 73 /** Given two tracks, it tells you whether they can react
83 protected: << 74 */
84 const G4DNAMolecularReactionTable*& fMolRe << 75 virtual G4bool TestReactibility(const G4Track&,
85 G4VDNAReactionModel* fpReactionModel; << 76 const G4Track&,
>> 77 const double currentStepTime,
>> 78 const double previousStepTime,
>> 79 bool userStepTimeLimit) /*const*/ ;
>> 80
>> 81 /** Will generate the products of the two given tracks
>> 82 */
>> 83 virtual G4ITReactionChange* MakeReaction(const G4Track&, const G4Track&) ;
>> 84
>> 85 inline void SetReactionModel(G4VDNAReactionModel*);
>> 86 inline void SetReactionTable(const G4DNAMolecularReactionTable*);
>> 87
>> 88 inline void SetVerbose(int);
>> 89 // 1 : only when make reaction is called
>> 90 // 2 : both make reaction + test reactibility are called
>> 91
>> 92 protected:
>> 93 const G4DNAMolecularReactionTable*& fMolReactionTable;
>> 94 G4VDNAReactionModel* fReactionModel;
>> 95 G4int fVerbose;
>> 96 G4double fReactionRadius ;
>> 97 G4double fDistance;
>> 98 private:
86 }; 99 };
>> 100
>> 101 inline void G4DNAMolecularReaction::SetReactionModel(G4VDNAReactionModel* model)
>> 102 {
>> 103 fReactionModel = model;
>> 104 }
>> 105
>> 106 inline void G4DNAMolecularReaction::SetVerbose(int verb)
>> 107 {
>> 108 fVerbose = verb;
>> 109 }
>> 110
>> 111 #endif // G4MOLECULARREACTION_H
87 112