| Geant4 Cross Reference |
1 // 1 //
2 // ******************************************* 2 // ********************************************************************
3 // * License and Disclaimer 3 // * License and Disclaimer *
4 // * 4 // * *
5 // * The Geant4 software is copyright of th 5 // * The Geant4 software is copyright of the Copyright Holders of *
6 // * the Geant4 Collaboration. It is provided 6 // * the Geant4 Collaboration. It is provided under the terms and *
7 // * conditions of the Geant4 Software License 7 // * conditions of the Geant4 Software License, included in the file *
8 // * LICENSE and available at http://cern.ch/ 8 // * LICENSE and available at http://cern.ch/geant4/license . These *
9 // * include a list of copyright holders. 9 // * include a list of copyright holders. *
10 // * 10 // * *
11 // * Neither the authors of this software syst 11 // * Neither the authors of this software system, nor their employing *
12 // * institutes,nor the agencies providing fin 12 // * institutes,nor the agencies providing financial support for this *
13 // * work make any representation or warran 13 // * work make any representation or warranty, express or implied, *
14 // * regarding this software system or assum 14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file 15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitatio 16 // * for the full disclaimer and the limitation of liability. *
17 // * 17 // * *
18 // * This code implementation is the result 18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboratio 19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distri 20 // * By using, copying, modifying or distributing the software (or *
21 // * any work based on the software) you ag 21 // * any work based on the software) you agree to acknowledge its *
22 // * use in resulting scientific publicati 22 // * use in resulting scientific publications, and indicate your *
23 // * acceptance of all terms of the Geant4 Sof 23 // * acceptance of all terms of the Geant4 Software license. *
24 // ******************************************* 24 // ********************************************************************
25 // 25 //
26 // 26 //
27 // Author: Mathieu Karamitros 27 // Author: Mathieu Karamitros
28 28
29 // The code is developed in the framework of t 29 // The code is developed in the framework of the ESA AO7146
30 // 30 //
31 // We would be very happy hearing from you, se 31 // We would be very happy hearing from you, send us your feedback! :)
32 // 32 //
33 // In order for Geant4-DNA to be maintained an 33 // In order for Geant4-DNA to be maintained and still open-source,
34 // article citations are crucial. 34 // article citations are crucial.
35 // If you use Geant4-DNA chemistry and you pub 35 // If you use Geant4-DNA chemistry and you publish papers about your software,
36 // in addition to the general paper on Geant4- 36 // in addition to the general paper on Geant4-DNA:
37 // 37 //
38 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 38 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157–178
39 // 39 //
40 // we would be very happy if you could please 40 // we would be very happy if you could please also cite the following
41 // reference papers on chemistry: 41 // reference papers on chemistry:
42 // 42 //
43 // J. Comput. Phys. 274 (2014) 841-882 43 // J. Comput. Phys. 274 (2014) 841-882
44 // Prog. Nucl. Sci. Tec. 2 (2011) 503-508 44 // Prog. Nucl. Sci. Tec. 2 (2011) 503-508
45 45
46 46
47 #pragma once 47 #pragma once
48 48
49 #include <G4VITReactionProcess.hh> 49 #include <G4VITReactionProcess.hh>
50 #include <vector> 50 #include <vector>
51 51
52 class G4DNAMolecularReactionTable; 52 class G4DNAMolecularReactionTable;
53 class G4VDNAReactionModel; 53 class G4VDNAReactionModel;
54 class G4ITReactionSet; 54 class G4ITReactionSet;
55 55
56 /** 56 /**
57 * G4DNAMolecularReaction is the reaction pro 57 * G4DNAMolecularReaction is the reaction process
58 * used in G4DNAMolecularStepByStepModel. 58 * used in G4DNAMolecularStepByStepModel.
59 * It test whether molecules can react after 59 * It test whether molecules can react after testing.
60 * If so, the reaction is made. 60 * If so, the reaction is made.
61 * \deprecated This class will be removed 61 * \deprecated This class will be removed
62 */ 62 */
63 class G4DNAMolecularReaction : public G4VITRea 63 class G4DNAMolecularReaction : public G4VITReactionProcess
64 { 64 {
65 public: 65 public:
66 G4DNAMolecularReaction(); 66 G4DNAMolecularReaction();
67 explicit G4DNAMolecularReaction(G4VDNAReac 67 explicit G4DNAMolecularReaction(G4VDNAReactionModel*);
68 ~G4DNAMolecularReaction() override = defau 68 ~G4DNAMolecularReaction() override = default;
69 G4DNAMolecularReaction(const G4DNAMolecula 69 G4DNAMolecularReaction(const G4DNAMolecularReaction& other) = delete;
70 G4DNAMolecularReaction& operator=(const G4 70 G4DNAMolecularReaction& operator=(const G4DNAMolecularReaction& other) = delete;
71 71
72 G4bool TestReactibility(const G4Track&, 72 G4bool TestReactibility(const G4Track&,
73 const G4Track&, 73 const G4Track&,
74 double currentStep 74 double currentStepTime,
75 bool userStepTimeL 75 bool userStepTimeLimit) override;
76 76
77 std::vector<std::unique_ptr<G4ITReactionCh 77 std::vector<std::unique_ptr<G4ITReactionChange>> FindReaction(G4ITReactionSet*,
78 const double, const double, const bool 78 const double, const double, const bool) override;
79 std::unique_ptr<G4ITReactionChange> MakeRe 79 std::unique_ptr<G4ITReactionChange> MakeReaction(const G4Track&, const G4Track&) override;
80 80
81 void SetReactionModel(G4VDNAReactionModel* 81 void SetReactionModel(G4VDNAReactionModel*);
82 82
83 protected: 83 protected:
84 const G4DNAMolecularReactionTable*& fMolRe 84 const G4DNAMolecularReactionTable*& fMolReactionTable;
85 G4VDNAReactionModel* fpReactionModel; 85 G4VDNAReactionModel* fpReactionModel;
86 }; 86 };
87 87