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Geant4/processes/electromagnetic/dna/management/src/G4KDTree.cc

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Differences between /processes/electromagnetic/dna/management/src/G4KDTree.cc (Version 11.3.0) and /processes/electromagnetic/dna/management/src/G4KDTree.cc (Version 10.6.p3)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
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 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 /*                                                 26 /*
 27  * G4KDTree.cc                                     27  * G4KDTree.cc
 28  *                                                 28  *
 29  *  Created on: 22 oct. 2013                       29  *  Created on: 22 oct. 2013
 30  *      Author: kara                               30  *      Author: kara
 31  */                                                31  */
 32                                                    32 
 33 #include "globals.hh"                              33 #include "globals.hh"
 34 #include <cstdio>                              <<  34 #include <stdio.h>
                                                   >>  35 #include <stdlib.h>
 35 #include <cmath>                                   36 #include <cmath>
 36 #include "G4KDTree.hh"                             37 #include "G4KDTree.hh"
 37 #include "G4KDMap.hh"                              38 #include "G4KDMap.hh"
 38 #include "G4KDNode.hh"                             39 #include "G4KDNode.hh"
 39 #include "G4KDTreeResult.hh"                       40 #include "G4KDTreeResult.hh"
 40 #include <list>                                    41 #include <list>
 41 #include <iostream>                                42 #include <iostream>
 42                                                    43 
 43 using namespace std;                               44 using namespace std;
 44                                                    45 
 45 G4Allocator<G4KDTree>*& G4KDTree::fgAllocator(     46 G4Allocator<G4KDTree>*& G4KDTree::fgAllocator()
 46 {                                                  47 {
 47   G4ThreadLocalStatic G4Allocator<G4KDTree>* _ <<  48     G4ThreadLocalStatic G4Allocator<G4KDTree>* _instance = nullptr;
 48   return _instance;                            <<  49     return _instance;
 49 }                                                  50 }
 50                                                    51 
 51 //____________________________________________     52 //______________________________________________________________________
 52 // KDTree methods                                  53 // KDTree methods
 53 G4KDTree::G4KDTree(size_t k)                   <<  54 G4KDTree::G4KDTree(size_t k) :
 54   : fDim(k)                                    <<  55     fKDMap(new G4KDMap(k))
 55   ,fKDMap(new G4KDMap(k))                      <<  56 {
 56 {}                                             <<  57   fDim = k;
                                                   >>  58   fRoot = 0;
                                                   >>  59   fRect = 0;
                                                   >>  60   fNbNodes = 0;
                                                   >>  61   fNbActiveNodes = 0;
                                                   >>  62 }
 57                                                    63 
 58 G4KDTree::~G4KDTree()                              64 G4KDTree::~G4KDTree()
 59 {                                                  65 {
 60   if(fRoot != nullptr){                        <<  66   if (fRoot) __Clear_Rec(fRoot);
 61     __Clear_Rec(fRoot);                        <<  67   fRoot = 0;
 62     fRoot = nullptr;                           << 
 63   }                                            << 
 64                                                    68 
 65   if(fRect != nullptr){                        <<  69   if (fRect)
                                                   >>  70   {
 66     delete fRect;                                  71     delete fRect;
 67     fRect = nullptr;                           <<  72     fRect = 0;
 68   }                                                73   }
 69                                                    74 
 70   if(fKDMap != nullptr){                       <<  75   if (fKDMap) delete fKDMap;
 71     delete fKDMap;                             << 
 72     fKDMap = nullptr;                          << 
 73   }                                            << 
 74 }                                                  76 }
 75                                                    77 
 76 void* G4KDTree::operator new(size_t)               78 void* G4KDTree::operator new(size_t)
 77 {                                                  79 {
 78   if(fgAllocator() == nullptr){                <<  80   if (!fgAllocator()) fgAllocator() = new G4Allocator<G4KDTree>;
 79     fgAllocator() = new G4Allocator<G4KDTree>; <<  81   return (void *) fgAllocator()->MallocSingle();
 80   }                                            << 
 81   return (void*) fgAllocator()->MallocSingle() << 
 82 }                                                  82 }
 83                                                    83 
 84 void G4KDTree::operator delete(void* aNode)    <<  84 void G4KDTree::operator delete(void *aNode)
 85 {                                                  85 {
 86   fgAllocator()->FreeSingle((G4KDTree*) aNode)     86   fgAllocator()->FreeSingle((G4KDTree*) aNode);
 87 }                                                  87 }
 88                                                    88 
 89 void G4KDTree::Print(std::ostream& out) const      89 void G4KDTree::Print(std::ostream& out) const
 90 {                                                  90 {
 91   if(fRoot != nullptr){                        <<  91   if (fRoot) fRoot->Print(out);
 92     fRoot->Print(out);                         << 
 93   }                                            << 
 94 }                                                  92 }
 95                                                    93 
 96 void G4KDTree::Clear()                             94 void G4KDTree::Clear()
 97 {                                                  95 {
 98   __Clear_Rec(fRoot);                              96   __Clear_Rec(fRoot);
 99   fRoot    = nullptr;                          <<  97   fRoot = 0;
100   fNbNodes = 0;                                    98   fNbNodes = 0;
101                                                    99 
102   if(fRect != nullptr)                         << 100   if (fRect)
103   {                                               101   {
104     delete fRect;                                 102     delete fRect;
105     fRect = nullptr;                           << 103     fRect = 0;
106   }                                               104   }
107 }                                                 105 }
108                                                   106 
109 void G4KDTree::__Clear_Rec(G4KDNode_Base* node    107 void G4KDTree::__Clear_Rec(G4KDNode_Base* node)
110 {                                                 108 {
111   if(node == nullptr)                          << 109   if (!node) return;
112   {                                            << 
113     return;                                    << 
114   }                                            << 
115                                                   110 
116   if(node->GetLeft() != nullptr)               << 111   if (node->GetLeft()) __Clear_Rec(node->GetLeft());
117   {                                            << 112   if (node->GetRight()) __Clear_Rec(node->GetRight());
118     __Clear_Rec(node->GetLeft());              << 
119   }                                            << 
120   if(node->GetRight() != nullptr)              << 
121   {                                            << 
122     __Clear_Rec(node->GetRight());             << 
123   }                                            << 
124                                                   113 
125   delete node;                                    114   delete node;
126 }                                                 115 }
127                                                   116 
128 void G4KDTree::__InsertMap(G4KDNode_Base* node << 117 void G4KDTree::__InsertMap(G4KDNode_Base *node)
                                                   >> 118 {
                                                   >> 119   fKDMap->Insert(node);
                                                   >> 120 }
129                                                   121 
130 void G4KDTree::Build()                            122 void G4KDTree::Build()
131 {                                                 123 {
132   size_t Nnodes = fKDMap->GetSize();              124   size_t Nnodes = fKDMap->GetSize();
133                                                   125 
134   G4cout << "********************" << G4endl;     126   G4cout << "********************" << G4endl;
135   G4cout << "template<typename PointT> G4KDTre    127   G4cout << "template<typename PointT> G4KDTree<PointT>::Build" << G4endl;
136   G4cout << "Map size = " << Nnodes << G4endl;    128   G4cout << "Map size = " << Nnodes << G4endl;
137                                                   129 
138   G4KDNode_Base* root = fKDMap->PopOutMiddle(0    130   G4KDNode_Base* root = fKDMap->PopOutMiddle(0);
139                                                   131 
140   if(root == nullptr)                          << 132   if(root == 0) return;
141   {                                            << 
142     return;                                    << 
143   }                                            << 
144                                                   133 
145   fRoot = root;                                   134   fRoot = root;
146   fNbActiveNodes++;                               135   fNbActiveNodes++;
147   fRect = new HyperRect(fDim);                    136   fRect = new HyperRect(fDim);
148   fRect->SetMinMax(*fRoot, *fRoot);               137   fRect->SetMinMax(*fRoot, *fRoot);
149                                                   138 
150   Nnodes--;                                       139   Nnodes--;
151                                                   140 
152   G4KDNode_Base* parent = fRoot;                  141   G4KDNode_Base* parent = fRoot;
153                                                   142 
154   for(size_t n = 0; n < Nnodes; n += fDim)     << 143   for (size_t n = 0; n < Nnodes; n += fDim)
155   {                                               144   {
156     for(size_t dim = 0; dim < fDim; dim++)     << 145     for (size_t dim = 0; dim < fDim; dim++)
157     {                                             146     {
158       G4KDNode_Base* node = fKDMap->PopOutMidd    147       G4KDNode_Base* node = fKDMap->PopOutMiddle(dim);
159       if(node != nullptr)                      << 148       if (node)
160       {                                           149       {
161         parent->Insert(node);                     150         parent->Insert(node);
162         fNbActiveNodes++;                         151         fNbActiveNodes++;
163         fRect->Extend(*node);                     152         fRect->Extend(*node);
164         parent = node;                            153         parent = node;
165       }                                           154       }
166     }                                             155     }
167   }                                               156   }
168 }                                                 157 }
169                                                   158 
170 G4KDTreeResultHandle G4KDTree::Nearest(G4KDNod    159 G4KDTreeResultHandle G4KDTree::Nearest(G4KDNode_Base* node)
171 {                                                 160 {
172   if(fRect == nullptr)                         << 161   //    G4cout << "Nearest(node)" << G4endl ;
                                                   >> 162   if (!fRect)
173   {                                               163   {
174     return nullptr;                            << 164     G4cout << "Tree empty" << G4endl;
                                                   >> 165     return 0;
175   }                                               166   }
176                                                   167 
177   std::vector<G4KDNode_Base*> result;          << 168   std::vector<G4KDNode_Base* > result;
178   G4double dist_sq = DBL_MAX;                  << 169   double dist_sq = DBL_MAX;
179                                                   170 
180   /* Duplicate the bounding hyperrectangle, we    171   /* Duplicate the bounding hyperrectangle, we will work on the copy */
181   auto newrect = new HyperRect(*fRect);        << 172   HyperRect *newrect = new HyperRect(*fRect);
182                                                   173 
183   /* Search for the nearest neighbour recursiv    174   /* Search for the nearest neighbour recursively */
184   G4int nbresult = 0;                          << 175   int nbresult = 0;
185                                                   176 
186   __NearestToNode(node, fRoot, *node, result,     177   __NearestToNode(node, fRoot, *node, result, &dist_sq, newrect, nbresult);
187                                                   178 
188   /* Free the copy of the hyperrect */            179   /* Free the copy of the hyperrect */
189   delete newrect;                                 180   delete newrect;
190                                                   181 
191   /* Store the result */                          182   /* Store the result */
192   if(!result.empty())                          << 183   if (!result.empty())
193   {                                               184   {
194     G4KDTreeResultHandle rset(new G4KDTreeResu    185     G4KDTreeResultHandle rset(new G4KDTreeResult(this));
195     G4int j = 0;                               << 186     int j = 0;
196     while(j < nbresult)                        << 187     while (j<nbresult)
197     {                                             188     {
198       rset->Insert(dist_sq, result[j]);           189       rset->Insert(dist_sq, result[j]);
199       j++;                                        190       j++;
200     }                                             191     }
201     rset->Rewind();                               192     rset->Rewind();
202                                                   193 
203     return rset;                                  194     return rset;
204   }                                               195   }
205                                                << 196   else
206   return nullptr;                              << 197   {
                                                   >> 198     return 0;
                                                   >> 199   }
207 }                                                 200 }
208                                                   201 
209 G4KDTreeResultHandle G4KDTree::NearestInRange(    202 G4KDTreeResultHandle G4KDTree::NearestInRange(G4KDNode_Base* node,
210                                                << 203                                               const double& range)
211 {                                                 204 {
212   if(node == nullptr)                          << 205   if (!node) return 0;
213   {                                            << 206   int ret(-1);
214     return nullptr;                            << 
215   }                                            << 
216   G4int ret(-1);                               << 
217                                                   207 
218   auto* rset = new G4KDTreeResult(this);       << 208   G4KDTreeResult *rset = new G4KDTreeResult(this);
219                                                   209 
220   const G4double range_sq = sqr(range);        << 210   const double range_sq = sqr(range);
221                                                   211 
222   if((ret = __NearestInRange(fRoot, *node, ran << 212   if ((ret = __NearestInRange(fRoot, *node, range_sq, range, *rset, 0, node)) == -1)
223      -1)                                       << 
224   {                                               213   {
225     delete rset;                                  214     delete rset;
226     return nullptr;                            << 215     return 0;
227   }                                               216   }
228   rset->Sort();                                   217   rset->Sort();
229   rset->Rewind();                                 218   rset->Rewind();
230   return rset;                                    219   return rset;
231 }                                                 220 }
232                                                   221