| Geant4 Cross Reference |
1 # Category emdna History << 1 =========================================================
>> 2 Geant4 - an Object-Oriented Toolkit for Simulation in HEP
>> 3 =========================================================
>> 4
>> 5 Category History file
>> 6 ---------------------
>> 7 This file should be used by G4 developers and category coordinators
>> 8 to briefly summarize all major modifications introduced in the code
>> 9 and keep track of all category-tags.
>> 10 It DOES NOT substitute the CVS log-message one should put at every
>> 11 committal in the CVS repository !
>> 12
>> 13 ----------------------------------------------------------
>> 14 * Reverse chronological order (last date on top), please *
>> 15 ----------------------------------------------------------*
2 16
3 See `CONTRIBUTING.rst` for details of **requir << 17 01-09-2018, SI, tag emdna-V10-03-32
4 which **must** added in reverse chronological <<
5 It must **not** be used as a substitute for wr <<
6 <<
7 ---------------------------------------------- <<
8 <<
9 ## 2024-10-31 Hoang Tran (emdna-V11-02-17) <<
10 - missing value in DNA PTB Ionization Structur <<
11 - missing GetMaterial() in DNA PTB Excitation <<
12 <<
13 ## 2024-10-02 Hoang Tran (emdna-V11-02-16) <<
14 - Modified the molecule names of OH, HO2, O in <<
15 Each molecule configuration has a molecule d <<
16 <<
17 ## 2024-08-27 Gabriele Cosmo (emdna-V11-02-15) <<
18 - Fixed reported Coverity defects for use of s <<
19 and const iterators. <<
20 <<
21 ## 2024-08-20 Hoang Tran (emdna-V11-02-14) <<
22 - debug invalid a root node of KDTree <<
23 <<
24 ## 2024-08-08 Gabriele Cosmo (emdna-V11-02-13) <<
25 - Fixed reported Coverity defects in G4LEPTSEl <<
26 for explicit null dereferenced pointer and o <<
27 cleanup. <<
28 <<
29 ## 2024-05-23 Hoang Tran (emdna-V11-02-12) <<
30 - Delete enum unused due to te use of EmParame <<
31 to control chemistry models in G4EmDNAChemis <<
32 <<
33 ## 2024-05-11 Gabriele Cosmo (emdna-V11-02-11) <<
34 - Fixed compilation error on macOS/clang with <<
35 of std::function in G4OctreeFinder. <<
36 <<
37 ## 2024-05-06 Gabriele Cosmo (emdna-V11-02-10) <<
38 - Fixed compilation warning on macOS/XCode for <<
39 in G4DNADoubleIonisationModel and G4DNAMulti <<
40 <<
41 ## 2024-04-25 Hoang Tran (emdna-V11-02-09) <<
42 - Delete DelayLists at the end of chemistry st <<
43 - clean the G4Scheduler <<
44 <<
45 ## 2024-04-24 W.G.Shin (emdna-V11-02-08) <<
46 - G4DNAELSEPAElasticModel <<
47 - Modified to be compatible with density sca <<
48 <<
49 ## 2024-04-19 Gabriele Cosmo (emdna-V11-02-07) <<
50 - Fixed compilation error on Windows VC++ with <<
51 Added missing declarations for TG4MoleculeSh <<
52 Based on [GitHub PR#69](https://github.com/G <<
53 <<
54 ## 2024-04-18 Hoang Tran (emdna-V11-02-06) <<
55 - debug invalid KDTree node. <<
56 <<
57 ## 2024-04-15 Vladimir Ivanchenko (emdna-V11-0 <<
58 - G4GeneralIonIonisationModel, G4DNAIonChargeI <<
59 G4DNAIonChargeDecreaseModel - new classes im <<
60 ions heavier than Helium <<
61 - G4DNAChargeDecrease, G4DNAChargeIncrease - r <<
62 min/max model energy inside processes clas <<
63 - G4DNARuddIonisationExtendedModel - updated i <<
64 from the general model <<
65 - source.cmake in models sub-directory become <<
66 both .hh and .cc files <<
67 <<
68 ## 2024-04-10 Shogo Okada (emdna-V11-02-04) <<
69 - G4DNAElectronHoleRecombination <<
70 - Changed the branch condition in FindReacta <<
71 involved in electron-hole recombination <<
72 - G4DNAWaterDissociationDisplacer <<
73 - Added dissociative decay channels for mult <<
74 - G4DNAMultipleIonisationManager <<
75 - New class focusing on generation of multip <<
76 calculation of scale parameter to compute <<
77 multiple-ionization process <<
78 - G4DNADoubleIonisation <<
79 - G4DNATripleIonisation <<
80 - G4DNAQuadrupleIonisation <<
81 - New process classes for multiple-ionizatio <<
82 - G4DNADoubleIonisationModel <<
83 - G4DNATripleIonisationModel <<
84 - G4DNAQuadrupleIonisationModel <<
85 - New model classes related to multiple-ioni <<
86 <<
87 ## 2024-04-05 Vladimir Ivanchenko (emdna-V11-0 <<
88 - G4DNARuddIonisationExtendedModel - updated m <<
89 uppload data in the class constructor once <<
90 effective charge approach for all ions wit <<
91 correct computation of stopping power and <<
92 variables before sampling, optimized algor <<
93 becomes ~10 times faster), removed unused <<
94 <<
95 ## 2024-02-29 Hoang Tran (emdna-V11-02-02) <<
96 - correct verbose conditions for warning in IR <<
97 <<
98 ## 2024-02-24 Hoang Tran (emdna-V11-02-01) <<
99 - Optimize IRT-syn at 1 ps for high LET applic <<
100 <<
101 ## 2023-12-15 Vladimir Ivanchenko (emdna-V11-0 <<
102 - G4DNABornAngle - fixed numerical problem: ad <<
103 use relativistic formula for max energy tr <<
104 <<
105 ## 2023-11-14 Ben Morgan (emdna-V11-01-25) <<
106 - Use G4FindDataDir to access data libraries i <<
107 <<
108 ## 2023-11-11 Hoang Tran (emdna-V11-01-24) <<
109 - correct fastercode section for dna opt6 <<
110 <<
111 ## 2023-10-12 Hoang Tran (emdna-V11-01-23) <<
112 - correct scavenger counter for oxygen <<
113 <<
114 ## 2023-10-11 Hoang Tran (emdna-V11-01-22) <<
115 - Fixed the K shell bug in G4DNARuddIonisation <<
116 <<
117 ## 2023-10-10 Hoang Tran (emdna-V11-01-21) <<
118 - improved equilibrium processes, introduced G <<
119 <<
120 ## 2023-09-04 Gabriele Cosmo (emdna-V11-01-20) <<
121 - In navigation classes, removed references to <<
122 which is now deprecated. <<
123 <<
124 ## 2023-08-31 Gabriele Cosmo (emdna-V11-01-19) <<
125 - Removed references to unused G4GRSSolid and <<
126 <<
127 ## 2023-08-29 (emdna-V11-01-18) <<
128 - Fix minor/obvious Coverity issues <<
129 <<
130 ## 2023-07-21 Ben Morgan (emdna-V11-01-17) <<
131 - Apply core clang-tidy fixes plus those for <<
132 - Cons/destructor modernization <<
133 - Readability and logic for conditionals/boo <<
134 <<
135 ## 2023-07-12 Ben Morgan (emdna-V11-01-16) <<
136 - Apply patch from [GitHub PR 58](https://gith <<
137 - Use std::erfc to avoid precision loss <<
138 - Remove unused header <<
139 <<
140 ## 2023-06-10 Hoang Tran (emdna-V11-01-15) <<
141 - minor correction for DNA material in option6 <<
142 <<
143 ## 2023-06-09 Hoang Tran (emdna-V11-01-14) <<
144 - use analytical method for DNA material in op <<
145 <<
146 ## 2023-06-03 Vladimir Ivanchenko (emdna-V11-0 <<
147 - G4DNARuddIonisationExtendedModel - model re- <<
148 threads, applicable for scaled energy interv <<
149 an ion data is not available proton x-sectio <<
150 used, sampling of delta-electron is done usi <<
151 <<
152 ## 2023-05-25 Hoang Tran (emdna-V11-01-12) <<
153 - Modified DNA cross section file name to new <<
154 <<
155 ## 2023-05-19 Hoang Tran (emdna-V11-01-11) <<
156 - Add DNA cross section to dna_option6 <<
157 <<
158 ## 2023-05-17 Hoang Tran (emdna-V11-01-10) <<
159 - Fix Compilation warnings on XCode <<
160 <<
161 ## 2023-05-04 Hoang Tran (emdna-V11-01-09) <<
162 - correct the initial values of G4DNAEventSche <<
163 <<
164 ## 2023-04-28 Hoang Tran (emdna-V11-01-08) <<
165 - add time structure (pulsed beam) to water ra <<
166 <<
167 ## 2023-04-26 Hoang Tran (emdna-V11-01-07) <<
168 - correct KDTree bug <<
169 <<
170 ## 2023-03-24 Hoang Tran (emdna-V11-01-06) <<
171 - icsd physicslist: deleted unused model, <<
172 - Apdated RegisterModel function with new stru <<
173 - added model data to G4DNAMaterialManager sin <<
174 <<
175 ## 2023-03-08 Gabriele Cosmo (emdna-V11-01-05) <<
176 - Fixed compilation warning on macOS/XCode for <<
177 in G4DNAVacuumModel::Initialise(). <<
178 <<
179 ## 2023-02-09 Hoang Tran (emdna-V11-01-04) <<
180 - Introduced G4DNAMaterialManager to manage av <<
181 and keeps DNA cross section data in one thread <<
182 - minor change in G4VDNAModel <<
183 <<
184 ## 2023-01-27 Hoang Tran (emdna-V11-01-03) <<
185 - reorganize multiple material model of PTB mo <<
186 G4VDNAModel plays like a data layer for multip <<
187 The concrete models are independent of G4DNAMo <<
188 <<
189 ## 2023-01-17 Hoang Tran (emdna-V11-01-02) <<
190 - replaced string to material index and clean <<
191 G4DNAPTBIonisationModel, G4DNAPTBElasticModel, <<
192 G4DNAPTBExcitationStructure) - PTB models <<
193 - added material pointer members for each conc <<
194 - removed unused objects (G4DataVector()) <<
195 <<
196 ## 2023-01-06 Hoang Tran (emdna-V11-01-01) <<
197 - clean G4DNAModelInterface file for the model <<
198 <<
199 ## 2022-12-12 Hoang Tran (emdna-V11-01-00) <<
200 - fix coverity of G4DNARuddIonisationExtendedM <<
201 (Uninitialized scalar variable) from cand1 ana <<
202 <<
203 ## 2022-11-24 Vladimir Ivanchenko (emdna-V11-0 <<
204 - G4DNARuddIonisationExtendedModel - fixed com <<
205 radioactive decay module - before this upd <<
206 only 5 ions have data needed for this mode <<
207 model scaling relation to the carbon ion i <<
208 no data; low-energy limit is used now more <<
209 but not killed, because they may have radi <<
210 lines are removed from the class <<
211 <<
212 ## 2022-11-23 Gabriele Cosmo (emdna-V11-00-38) <<
213 - Fixed more compilation warnings for implicit <<
214 <<
215 ## 2022-11-22 Hoang Tran (emdna-V11-00-37) <<
216 - delete unused tests in dna (G4DNAProcessTest <<
217 <<
218 ## 2022-11-18 Gabriele Cosmo (emdna-V11-00-36) <<
219 - Fixed compilation warnings for implicit type <<
220 <<
221 ## 2022-11-08 Vladimir Ivanchenko (emdna-V11-0 <<
222 - G4DNAUeharaScreenedRutherfordElasticModel - <<
223 low and high energy limit for the model; r <<
224 <<
225 ## 2022-11-01 Hoang Tran (emdna-V11-00-34) <<
226 - Fix Coverity issues for ref-09 <<
227 <<
228 ## 2022-10-10 Hoang Tran (emdna-V11-00-33) <<
229 - minor correction of IRT-syn model (chemistry <<
230 after 1 ps. <<
231 <<
232 ## 2022-10-21 Yann Perrot, Le Tuan Anh (emdna- <<
233 - Add nitrogen models from PTra code <<
234 <<
235 ## 2022-10-10 Hoang Tran (emdna-V11-00-31) <<
236 - Fixed minor mistake of file name in G4DNARPW <<
237 - Added protection for HighEnergyLimit/LowEner <<
238 G4DNARPWBAExcitationModel <<
239 <<
240 ## 2022-10-07 Gabriele Cosmo (emdna-V11-00-30) <<
241 - Fixed compilation warnings on Intel/icx comp <<
242 but not used in G4ITNavigator2. <<
243 <<
244 ## 2022-10-05 Hoang Tran (emdna-V11-00-29) <<
245 - Fix user's report for IRT model. <<
246 If the first IRTSampling won't give any rea <<
247 <<
248 ## 2022-10-03 Hoang Tran (emdna-V11-00-28) <<
249 - Fix Coverity static analysis for ref-08 <<
250 uninit_member in G4DNAMillerGreenExcitationMo <<
251 G4DNADingfelderChargeIncreaseModel,G4DNARuddI <<
252 Use auto & instead of auto : G4ITFinder, G4DN <<
253 <<
254 ## 2022-09-08 Hoang Tran (emdna-V11-00-27) <<
255 - Resolve dependency inconsistencies : <<
256 dna/management/include/G4ChemicalMoleculeF <<
257 dna/management/include/G4UserMeshAction.hh <<
258 dna/management/include/G4OctreeFinder.hh i <<
259 <<
260 ## 2022-09-05 Ben Morgan (emdna-V11-00-26) <<
261 - Partially resolve dependency inconsistencies <<
262 - NB: cannot be resolved fully without intro <<
263 G4emdna-man, G4emdna-molman, G4emdna-utils <<
264 <<
265 ## 2022-09-01 Seth R Johnson (emdna-V11-00-25) <<
266 - Define G4CT_MAX_COUNT for changing "compile <<
267 errors on NVHPC compiler. <<
268 <<
269 ## 2022-08-30 Vladimir Ivanchenko (emdna-V11-0 <<
270 - G4DNAExcitation, G4DNAVibExcitation, G4DNARo <<
271 cleanup according to the recent G4VEmProce <<
272 headers are moved to source; C++11 keyward <<
273 <<
274 ## 2022-06-21 Igor Semeniouk (emdna-V11-00-23) <<
275 - G4DNABornIonisationModel1.cc, G4DNACPA100Ela <<
276 G4DNACPA100IonisationModel.cc, G4DNAChampion <<
277 G4DNAELSEPAElasticModel.cc, G4DNAEmfietzoglo <<
278 G4DNAIonElasticModel.cc, G4DNAQuinnPlasmonEx <<
279 G4DNARPWBAIonisationModel.cc, G4DNARelativis <<
280 G4DNASancheExcitationModel.cc : <<
281 use G4FindDataDir("G4LEDATA") to find datase <<
282 <<
283 ## 2022-06-03 Hoang Tran (emdna-V11-00-22) <<
284 - correct DNA ion definitions in G4DNARuddIoni <<
285 <<
286 ## 2022-06-01 Hoang Tran (emdna-V11-00-21) <<
287 - G4Octree : fixed Coverity warning. <<
288 <<
289 ## 2022-05-24 Hoang Tran (emdna-V11-00-20) <<
290 - update data structure to improve performance <<
291 <<
292 ## 2022-05-18 Gabriele Cosmo (emdna-V11-00-19) <<
293 - G4ITTransportation: fixed misuse of bitwise <<
294 <<
295 ## 2022-05-12 Sergio Losilla (emdna-V11-00-18) <<
296 - Added missing headers. <<
297 <<
298 ## 2022-05-11 Hoang Tran (emdna-V11-00-17) <<
299 - change the scavenging filter of the IRT beyo <<
300 <<
301 ## 2022-05-02 Hoang Tran (emdna-V11-00-16) <<
302 - Add localthread for fUse of G4VMoleculeCount <<
303 <<
304 ## 2022-04-27 Miguel A. Cortes-Giraldo and Hoa <<
305 - Incorporation of model based on RPWBA to tra <<
306 - Added G4DNARPWBAExcitationModel, G4DNARPWBAI <<
307 <<
308 ## 2022-04-25 Hoang Tran (emdna-V11-00-14) <<
309 - add UserBrownianAction in G4DNABrownianTrans <<
310 G4DNAMolecularDissociation <<
311 - replace G4int by int64_t for width integer t <<
312 - add fResetScavenger in G4SchedulerMessenger <<
313 <<
314 ## 2022-04-14 Paolo Dondero (emdna-V11-00-13) <<
315 - save local instances for recurrent access to <<
316 G4DNAMillerGreenExcitationModel, G4DNARuddIo <<
317 G4DNARuddIonisationModel <<
318 - use G4Pow and G4Log instead of std::pow and <<
319 - inside G4DNARuddIonisationExtendedModel comm <<
320 inside G4DNAGenericIonsManager <<
321 <<
322 ## 2022-04-14 Hoang Tran (emdna-V11-00-12) <<
323 - Debug the report #2235 which might be relate <<
324 - Clean code <<
325 - Delete G4ITFinder.cc <<
326 <<
327 ## 2022-04-04 Paolo Dondero (emdna-V11-00-11) <<
328 - save local instances for recurrent access to <<
329 G4DNADingfelderChargeDecreaseModel and G4DNADi <<
330 - use G4Pow and G4Log instead of std::pow and <<
331 <<
332 ## 2022-03-18 SI (emdna-V11-00-10) <<
333 - add protection in G4DNACPA100IonisationModel <<
334 <<
335 ## 2022-03-15 Hoang Tran (emdna-V11-00-09) <<
336 - remove macro commands to control the chemist <<
337 (creating models in G4SchedulerMessenger can m <<
338 - add flag OctreeFinder in IRT_syn's Initializ <<
339 <<
340 ## 2022-03-04 Hoang Tran (emdna-V11-00-08) <<
341 - add macro commands to control the chemistry <<
342 parameters including the chemical molecules an <<
343 <<
344 ## 2022-02-18 Hoang Tran (emdna-V11-00-07) <<
345 - optimize IRT-syn model, use reaction radius <<
346 - delete G4VReactionType, G4DNAReactionTypeMan <<
347 G4DNAPartiallyDiffusionControlled <<
348 - delete G4DNAIRT_geomtries <<
349 <<
350 ## 2022-02-17 Jonas Hahnfeld (emdna-V11-00-06) <<
351 - `G4ITTransportation`: Make `PrepareState` mo <<
352 - `G4DNAPolyNucleotideReactionProcess`: <<
353 - Move `PrepareState` and `State` macros int <<
354 - Make `PrepareState` more function-like, ex <<
355 - Move variable `pMoleculeA` under `G4VERBOS <<
356 <<
357 ## 2022-02-10 Hoang Tran (emdna-V11-00-05) <<
358 - add the condition of water material for the <<
359 warning in G4DNAMolecularDissociation::DecayIt <<
360 <<
361 ## 2022-02-3 Hoang Tran (emdna-V11-00-04) <<
362 - modify the macro in G4Molecule.cc and G4ITTy <<
363 <<
364 ## 2022-01-18 Jonas Hahnfeld (emdna-V11-00-03) <<
365 - Prefer pointer to `const G4Material` if poss <<
366 <<
367 ## 2022-01-17 Jonas Hahnfeld (emdna-V11-00-02) <<
368 - Remove useless `const_cast` of `G4VSensitive <<
369 <<
370 ## 2021-12-23 Hoang Tran (emdna-V11-00-01) <<
371 - add G4DNAPolyNucleotideReactionProcess, G4VD <<
372 files for DNA damage applications <<
373 <<
374 ## 2021-12-10 Ben Morgan (emdna-V11-00-00) <<
375 - Change to new Markdown History format <<
376 <<
377 --- <<
378 <<
379 # History entries prior to 11.0 <<
380 <<
381 8-11-2021, H. Tran, emdna-V10-07-15 <<
382 - corrected Circular dependencies for mesoscop <<
383 - corrected the problem in IRT <<
384 <<
385 4-11-2021, H. Tran, emdna-V10-07-14 <<
386 - define a G4FakeParticleID::fLastValue in the <<
387 delete G4FakeParticleID.cc, <<
388 solve arithmetic problems, <<
389 Added new mesoscopic model for dna chemistry <<
390 <<
391 21-10-2021, W.G.Shin, emdna-V10-07-13 <<
392 - Added a virtual classes for DNA geometry - G <<
393 Modified classes - G4DNAIRT, G4DNAIRTMolecul <<
394 G4ITModelProcessor, G4Sch <<
395 G4DNAMolecularReactionTab <<
396 <<
397 23-09-2021, A. Ribon, emdna-V10-07-12 <<
398 - G4ITTransportation, G4DNAElastic, G4DNAExcit <<
399 G4DNAVibExcitation, G4DNAAttachment, G4DNACh <<
400 G4DNAChargeIncrease, G4DNAElectronSolvation, <<
401 G4DNASecondOrderReaction, G4DNAElectronHoleR <<
402 G4DNABrownianTransportation : replaced hardw <<
403 with enum values introduced in the new class <<
404 <<
405 18-07-2021, V. Ivanchenko, emdna-V10-07-11 <<
406 - G4DNABohrExcitationModel2, G4DNABohrIonisati <<
407 G4VLEPSModel - updated interfaces to G4Physi <<
408 <<
409 16-07-2021, D. Sakata, emdna-V10-07-10 <<
410 - Fixed initialization error in G4DNAELSEPAEla <<
411 <<
412 28-06-2021, G. Cosmo, emdna-V10-07-09 <<
413 - Fixed compilation error in G4ITMultiNavigato <<
414 enabled. <<
415 <<
416 31-05-2021, D.Sakata S. Guatelli, emdna-V10-07 <<
417 - Added new classes G4DNADiracRMatrixExcitatio <<
418 G4DNAQuinnPlasmonExcitatio <<
419 G4DNARelativisticIonisatio <<
420 G4DNAPlasmonExcitation <<
421 - Modified G4DNAELSEPAElasticModel for gold <<
422 <<
423 9-05-2021, H.Tran, tag emdna-V10-07-07 <<
424 - Add IRT-syn model <<
425 <<
426 16-04-2021, B.Morgan, tag emdna-V10-07-06 <<
427 - Migrate build to modular CMake API <<
428 <<
429 27-04-2021, H.Tran, tag emdna-V10-07-05 <<
430 - G4DNAElectronHoleRecombination: added Octree <<
431 - G4DNABrownianTransportation: modified AlongS <<
432 - added OctreeFinder and IRTUtils <<
433 <<
434 26-04-2021, V.Ivanchenko, tag emdna-V10-07-04 <<
435 - G4DNABornAngle, G4DNARuddAngle - updated pri <<
436 <<
437 12-03-2021, L.Pandola, tag emdna-V10-07-03 <<
438 - Move DNA-related Unit Tests from lowenergy/t <<
439 <<
440 24-02-2021, G.Cosmo, tag emdna-V10-07-02 <<
441 - Fixed dependency on g4tools, now moved to ex <<
442 <<
443 16-02-2021, W.G.Shin, tag emdna-V10-07-01 <<
444 - G4DNAElectronHoleRecombination <<
445 Dissociation channel of electron-hole recomb <<
446 G4EmDNAChemistry, _option1, _option2, _optio <<
447 - G4DNAWaterDissociationDisplacer <<
448 Added the fragment displacement for new diss <<
449 <<
450 29-10-2020, G.Cosmo, tag emdna-V10-06-12 <<
451 - Fix thread contention on mutable data in G4D <<
452 help resolving observed crashes in MT runs. <<
453 Some code cleanup. <<
454 <<
455 27-10-2020, V.Ivanchenko, tag emdna-V10-06-11 <<
456 - G4DNAMolecularMaterial - removed commented l <<
457 - History file fixed <<
458 <<
459 25-10-2020, V.Ivanchenko, tag emdna-V10-06-10 <<
460 - G4DNAMolecularMaterial - attempt to fix nigh <<
461 in chem6 example - do not delete instance of <<
462 <<
463 24-10-2020, I. Hrivnacova, tag emdna-V10-06-09 <<
464 - Added dependency on analysis/g4tools in GNUm <<
465 required after analysis update (analysis-V10 <<
466 <<
467 12-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 <<
468 - Fixed coverity warning <<
469 <<
470 10-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 <<
471 - Fixed coverity warnings <<
472 - Fix of IRT bug <<
473 (protection for the crash induced by empty re <<
474 <<
475 28-05-2020, B.Morgan, tag emdna-V10-06-06 <<
476 - Add missing G4analysismng module dependency <<
477 <<
478 20-05-20: W.G.Shin emdna-V10-06-05 <<
479 - Revised displacement of OH radicals of B1A1 <<
480 based on momentum conservation in G4DNAWaterDi <<
481 - Added missing History <<
482 <<
483 26-04-20: W.G.Shin emdna-V10-06-04 <<
484 - Fixed coverity test <<
485 <<
486 15-04-20: G.Cosmo emdna-V10-06-03 <<
487 - G4MoleculeDefinition: copy constructor and a <<
488 are not allowed (as for G4ParticleDefinition <<
489 <<
490 19-02-20: W.G.Shin emdna-V10-06-02 <<
491 - Fixed memory issue on G4DNAMolecularReaction <<
492 - Revised headeres of IRT classes <<
493 <<
494 12-02-20: W.G.Shin emdna-V10-06-01 <<
495 - Added protections floating point exception i <<
496 <<
497 10-01-20: W.G.Shin emdna-V10-06-00 <<
498 - Added classes for IRT <<
499 - Added features in management classes for IRT <<
500 G4ITModelProcessor ...) <<
501 - Added features in G4DNAMolecularReactionTabl <<
502 - Added molecules of Plante et al. (2017) (Oxy <<
503 <<
504 15-11-19: G.Cosmo emdna-V10-05-11 <<
505 - Fixed cases of implicit type conversions fro <<
506 <<
507 8-11-19: HT, tag emdna-V10-05-10 <<
508 - Fixed the exception divide by zero of diffus <<
509 G4DNABrownianTransportation::AlongStepGetPhysi <<
510 for the case of static molecules (DNA) (diffus <<
511 <<
512 24-10-19: J.Apostolakis, tag emdna-V10-05-09 <<
513 - Enabled G4ItNavigator{1,2} to flag if it enc <<
514 of external physical volume (meant for adapt <<
515 <<
516 19-10-19: WGS, SI, tag emdna-V10-05-08 <<
517 - Added new model G4DNAELSEPAElasticModel <<
518 <<
519 11-10-19: WGS, SI, tag emdna-V10-05-07 <<
520 - G4DNAOneStepThermalizationModel.* : <<
521 added Kreipl and Meesungnoen amorphous ice mod <<
522 - G4DNAWaterDissociationDisplacer* : updated <<
523 <<
524 03-06-2019, MK, tag emdna-V10-05-06 <<
525 - Fix GCC9 warnings <<
526 <<
527 26-03-2019, HT, tag emdna-V10-05-05 <<
528 - Added G4DNAMolecule <<
529 <<
530 10-03-2019, MK, tag emdna-V10-05-04 <<
531 - Fix reaction site issue <<
532 - Chemistry: clarify pointer ownership, clean <<
533 <<
534 11-03-2019, G.Cosmo, tag emdna-V10-05-03 <<
535 - Fixed typos in printouts in G4MolecularConfi <<
536 G4VITRestProcess, G4DNAElectronHoleRecombina <<
537 <<
538 18-01-2019, HT, tag emdna-V10-05-02 <<
539 - Transformed the exception into warning in G4 <<
540 <<
541 28-12-2018, MK, tag emdna-V10-05-01 <<
542 DEV-300 : G4DNAChemistryManager clarify pointe <<
543 <<
544 05-01-2019, HT, tag emdna-V10-05-00 <<
545 - moved the checking position of track status <<
546 in G4ITStepProcessor::SetInitialStep() <<
547 <<
548 01-09-2018, SI, tag emdna-V10-04-10 <<
549 renamed tag 18 renamed tag
550 19
551 01-09-2018, SI, tag emdna-v10-04-09 << 20 01-09-2018, SI
552 - bugzilla 2084 21 - bugzilla 2084
553 https://bugzilla-geant4.kek.jp/show_bug.cgi?id 22 https://bugzilla-geant4.kek.jp/show_bug.cgi?id=2084
554 23
555 30-07-2018, SI, tag emdna-V10-04-08 << 24 09-02-2018, M.Asai tag emdna-V10-03-31
556 - included upper energy limit of models (2) <<
557 <<
558 29-07-2018, SI, tag emdna-V10-04-07 <<
559 - included upper energy limit of models <<
560 <<
561 01-07-2018, SI, tag emdna-V10-04-06 <<
562 - added protection in Auger emission <<
563 <<
564 30-06-2018, MS, ZF, SI tag emdna-V10-04-05 <<
565 - updated Si mass in G4DNAGenericIonsManager <<
566 <<
567 22-06-2018, SI tag emdna-V10-04-04 <<
568 - fixed warnings in lepts models <<
569 <<
570 14-05-2018, SI tag emdna-V10-04-03 <<
571 - chemistry update by Mathieu <<
572 <<
573 01-05-2018, SI tag emdna-V10-04-02 <<
574 - chemistry update by Mathieu <<
575 <<
576 09-02-2018, M.Asai tag emdna-V10-04-01 <<
577 - G4DNAMolecularMaterial.cc : 25 - G4DNAMolecularMaterial.cc :
578 GetDensityTableFor() and GetNumMolPerVolTabl 26 GetDensityTableFor() and GetNumMolPerVolTableFor() methods are accepted
579 at G4State_Init rather than G4State_Idle. 27 at G4State_Init rather than G4State_Idle.
580 - Co-works with run-V10-04-01 and global-V10-0 28 - Co-works with run-V10-04-01 and global-V10-04-01.
581 29
582 21-12-2017, G.Cosmo tag emdna-V10-04-00 << 30 21-12-2017, G.Cosmo
583 - Fixed self-consistency in headers (missing # 31 - Fixed self-consistency in headers (missing #include) in G4IosFlagsSaver,
584 G4KDNode, G4MoleculeIterator and G4LEPTSDiff 32 G4KDNode, G4MoleculeIterator and G4LEPTSDiffXS.
585 Fixed spurious definition of G4IT namespace 33 Fixed spurious definition of G4IT namespace in G4ITMultiNavigator header.
586 Thanks to Raphael Isemann for reporting thes 34 Thanks to Raphael Isemann for reporting these.
587 35
588 01-11-2017, MK tag emdna-V10-03-30 36 01-11-2017, MK tag emdna-V10-03-30
589 - remove models/test directory 37 - remove models/test directory
590 38
591 31-10-2017, JA ( tag missing ) 39 31-10-2017, JA ( tag missing )
592 - G4KDNode.hh: Add missing included file - nee 40 - G4KDNode.hh: Add missing included file - needed in test
593 41
594 16-08-2017, SI tag emdna-V10-03-28 42 16-08-2017, SI tag emdna-V10-03-28
595 - updated variable types in models 43 - updated variable types in models
596 44
597 10-08-2017, SI tag emdna-V10-03-27 45 10-08-2017, SI tag emdna-V10-03-27
598 - test 46 - test
599 47
600 10-08-2017, SI tag emdna-V10-03-26 48 10-08-2017, SI tag emdna-V10-03-26
601 - same as previous 49 - same as previous
602 50
603 09-08-2017, SI tag emdna-V10-03-25 51 09-08-2017, SI tag emdna-V10-03-25
604 - same as previous 52 - same as previous
605 53
606 09-08-2017, SI tag emdna-V10-03-24 54 09-08-2017, SI tag emdna-V10-03-24
607 - G4DNAEmfietzoglouIonisationModel: added prot 55 - G4DNAEmfietzoglouIonisationModel: added protection for out of bound access
608 56
609 03-08-2017, VI tag emdna-V10-03-23 57 03-08-2017, VI tag emdna-V10-03-23
610 - G4DNAExcitation, G4DNAIonisation - make cohe 58 - G4DNAExcitation, G4DNAIonisation - make coherent model initialisation
611 59
612 28-07-2017, SI, tag emdna-V10-03-22 60 28-07-2017, SI, tag emdna-V10-03-22
613 - added stationary mode flag to CPA100 ionisat 61 - added stationary mode flag to CPA100 ionisation.
614 62
615 04-07-2017, SI, tag emdna-V10-03-21 63 04-07-2017, SI, tag emdna-V10-03-21
616 - added tagging of atom. deexc. products in io 64 - added tagging of atom. deexc. products in ionisation models.
617 65
618 31-05-2017, SM, tag emdna-V10-03-20 66 31-05-2017, SM, tag emdna-V10-03-20
619 - Correct windows issues with path of diff. CS 67 - Correct windows issues with path of diff. CS data file.
620 68
621 31-05-2017, SI, tag emdna-V10-03-19 69 31-05-2017, SI, tag emdna-V10-03-19
622 - roll-back (Windows issues with previous tag) 70 - roll-back (Windows issues with previous tag)
623 71
624 24-05-2017, SI, tag emdna-V10-03-18 72 24-05-2017, SI, tag emdna-V10-03-18
625 - added tagging of atom. deexc. products in io 73 - added tagging of atom. deexc. products in ionisation models.
626 74
627 11-05-2017, VI tag emdna-V10-03-17 75 11-05-2017, VI tag emdna-V10-03-17
628 - fix for gcc 7.1 warnings in G4DNACrossSectio << 76 - fix for gcc 7.1 warnings in G4DNACrossSectionDataSet.cc.
629 77
630 10-05-2017, NL, MK, SI, tag emdna-V10-03-16 78 10-05-2017, NL, MK, SI, tag emdna-V10-03-16
631 - fix for gcc 7.1 warnings in G4DNACrossSectio << 79 - fix for gcc 7.1 warnings in G4DNACrossSectionDataSet.cc.
632 80
633 03-05-2017, SM, tag emdna-V10-03-15 81 03-05-2017, SM, tag emdna-V10-03-15
634 - add the new G4DNADummyModel and allow the co << 82 - add the new G4DNADummyModel and allow the combination of G4VEmModel and G4VDNAModel in G4DNAModelInterface.
635 83
636 27-04-2017, SM, tag emdna-V10-03-14 84 27-04-2017, SM, tag emdna-V10-03-14
637 - correct small typo mistakes. 85 - correct small typo mistakes.
638 86
639 27-04-2017, SM, tag emdna-V10-03-13 87 27-04-2017, SM, tag emdna-V10-03-13
640 - update Models/G4DNAModelInterface to correct 88 - update Models/G4DNAModelInterface to correctly use G4DNAMolecularMaterial
641 89
642 10-03-2017, MK, tag emdna-V10-03-12 90 10-03-2017, MK, tag emdna-V10-03-12
643 - update utils/GNUmakefile 91 - update utils/GNUmakefile
644 92
645 13-02-2017, MK, tag emdna-V10-03-11 93 13-02-2017, MK, tag emdna-V10-03-11
646 - G4DNAMolecularMaterial: update doxygen doc 94 - G4DNAMolecularMaterial: update doxygen doc
647 95
648 13-02-2017, MK, tag emdna-V10-03-10 96 13-02-2017, MK, tag emdna-V10-03-10
649 - G4DNAMolecularMaterial: << 97 - G4DNAMolecularMaterial:
650 remove newly introduced methods, add fatal e 98 remove newly introduced methods, add fatal exception if used
651 add doxygen documentation 99 add doxygen documentation
652 100
653 10-02-2017, MK, tag emdna-V10-03-09 101 10-02-2017, MK, tag emdna-V10-03-09
654 - Introducing G4PhysChemIO 102 - Introducing G4PhysChemIO
655 - Move call to G4TrackList::Pop(track) from G4 103 - Move call to G4TrackList::Pop(track) from G4ITTrackingManager
656 to G4ITTrackHolder. And make sure track stat 104 to G4ITTrackHolder. And make sure track status is set to fStopAndKill
657 when G4ITTrackHolder::PushToKill is called. 105 when G4ITTrackHolder::PushToKill is called.
658 106
659 09-02-2017, MK, tag emdna-V10-03-08 107 09-02-2017, MK, tag emdna-V10-03-08
660 - G4KDNode.hh: remove unused G4ThreeVector hea 108 - G4KDNode.hh: remove unused G4ThreeVector header
661 - G4KDMap.hh: int->size_t + indentation 109 - G4KDMap.hh: int->size_t + indentation
662 - G4KDMap.cc: int->size_t 110 - G4KDMap.cc: int->size_t
663 - G4IT & G4Molecule: template specialization 111 - G4IT & G4Molecule: template specialization
664 template<> G4KDNode<G4IT / G4Molecule>::~G4K 112 template<> G4KDNode<G4IT / G4Molecule>::~G4KDNode()
665 113
666 24-01-2017, SM, tag emdna-V10-03-07 114 24-01-2017, SM, tag emdna-V10-03-07
667 - add a ifdef to remove a warning (windows onl 115 - add a ifdef to remove a warning (windows only) related to the use of several levels of map.
668 116
669 23-01-2017, SM, tag emdna-V10-03-06 117 23-01-2017, SM, tag emdna-V10-03-06
670 - add missing G4DNAModelInterface files (.hh a 118 - add missing G4DNAModelInterface files (.hh and .cc) to the source.cmake
671 119
672 23-01-2017, SM CV, tag emdna-V10-03-05 120 23-01-2017, SM CV, tag emdna-V10-03-05
673 - add new G4DNAPTB* classes and the structure 121 - add new G4DNAPTB* classes and the structure of the new material management system
674 122
675 14-01-2017, MK, tag emdna-V10-02-37 123 14-01-2017, MK, tag emdna-V10-02-37
676 - Prevent a crash when calling G4ITTrackingMan 124 - Prevent a crash when calling G4ITTrackingManager::EndTracking from
677 the UserTimeStepAction::PostTimeStepAction 125 the UserTimeStepAction::PostTimeStepAction
678 - Add missing: G4ITTrackingManager* G4Schedule << 126 - Add missing: G4ITTrackingManager* G4Scheduler::GetTrackingManager()
679 127
680 28-12-2016, SI, tag emdna-V10-03-04 128 28-12-2016, SI, tag emdna-V10-03-04
681 - extended upper energy limit of protons for << 129 - extended upper energy limit of protons for
682 G4DNARuddIonisationExtendedModel 130 G4DNARuddIonisationExtendedModel
683 131
684 27-12-2016, SI, tag emdna-V10-03-03 132 27-12-2016, SI, tag emdna-V10-03-03
685 - updated references of CPA100 classes 133 - updated references of CPA100 classes
686 134
687 23-12-2016, SI, tag emdna-V10-03-02 135 23-12-2016, SI, tag emdna-V10-03-02
688 - updated sources.cmake 136 - updated sources.cmake
689 137
690 23-12-2016, SI, tag emdna-V10-03-01 138 23-12-2016, SI, tag emdna-V10-03-01
691 - commit of first CPA100 classes, part 2 139 - commit of first CPA100 classes, part 2
692 140
693 21-12-2016, SI, tag emdna-V10-03-00 141 21-12-2016, SI, tag emdna-V10-03-00
694 - commit of first CPA100 classes 142 - commit of first CPA100 classes
695 143
696 27-11-2016, MK, tag emdna-V10-02-36 144 27-11-2016, MK, tag emdna-V10-02-36
697 - G4Electron_aq: correct charge 145 - G4Electron_aq: correct charge
698 - G4DNADamages -> G4DNADamage 146 - G4DNADamages -> G4DNADamage
699 147
700 17-11-2016, MK, tag emdna-V10-02-35 148 17-11-2016, MK, tag emdna-V10-02-35
701 - G4ManyFastLists.hh: iterator::GetTrackList() 149 - G4ManyFastLists.hh: iterator::GetTrackList() correct type returned
702 150
703 16-11-2016, MK, tag emdna-V10-02-34 151 16-11-2016, MK, tag emdna-V10-02-34
704 - G4VMolecularDissociationDisplacer & G4DNAWat << 152 - G4VMolecularDissociationDisplacer & G4DNAWaterDissociationDisplacer:
705 displacement types can be thread shared 153 displacement types can be thread shared
706 - G4TrackState: Move implementation of static << 154 - G4TrackState: Move implementation of static function
707 G4VTrackStateID::Create() to c 155 G4VTrackStateID::Create() to cc file - windows crash
708 156
709 15-11-2016, MK, tag emdna-V10-02-33 157 15-11-2016, MK, tag emdna-V10-02-33
710 - G4VMolecularDissociationDisplacer.cc: add mi 158 - G4VMolecularDissociationDisplacer.cc: add missing initializer
711 159
712 14-11-2016, MK, tag emdna-V10-02-32 160 14-11-2016, MK, tag emdna-V10-02-32
713 - Separate def and impl of dissociation flag t << 161 - Separate def and impl of dissociation flag to prevent issue with
714 windows platforms 162 windows platforms
715 163
716 14-11-2016, MK, tag emdna-V10-02-31 164 14-11-2016, MK, tag emdna-V10-02-31
717 - G4DNAOneStepThermalizationModel.cc: << 165 - G4DNAOneStepThermalizationModel.cc:
718 tag init constexpr factor with number rather 166 tag init constexpr factor with number rather than expression
719 167
720 14-11-2016, MK, tag emdna-V10-02-30 168 14-11-2016, MK, tag emdna-V10-02-30
721 - Use CLHEP::pi instead of M_PI 169 - Use CLHEP::pi instead of M_PI
722 170
723 14-11-2016, MK, tag emdna-V10-02-29 171 14-11-2016, MK, tag emdna-V10-02-29
724 - Correct bracket enclosing 172 - Correct bracket enclosing
725 173
726 14-11-2016, MK, tag emdna-V10-02-28 174 14-11-2016, MK, tag emdna-V10-02-28
727 - G4VMoleculeCounter: move imp of static metho 175 - G4VMoleculeCounter: move imp of static methods to cc to avoid crash on win
728 - Update displacers, oneStepTherm 176 - Update displacers, oneStepTherm
729 - WaterDisplacer: change the electron thermali 177 - WaterDisplacer: change the electron thermalization distribution
730 - OneStepTherm: two inner thermalization model 178 - OneStepTherm: two inner thermalization models can be chosen as template argument
731 - Adds and use G4CTCounter 179 - Adds and use G4CTCounter
732 180
733 02-11-2016, MK, tag emdna-V10-02-27 181 02-11-2016, MK, tag emdna-V10-02-27
734 - add G4VMoleculeCounter & enable using custom << 182 - add G4VMoleculeCounter & enable using custom molecule counter
735 - pass location information to molecule counte 183 - pass location information to molecule counter
736 - G4ITNavigator2: relocate voxelNavigator befo << 184 - G4ITNavigator2: relocate voxelNavigator before every call to
737 computeStep & computeSafety << 185 computeStep & computeSafety
738 186
739 07-08-2016, SI, tag emdna-V10-02-26 187 07-08-2016, SI, tag emdna-V10-02-26
740 - added stationnary mode to sub-excitation ele 188 - added stationnary mode to sub-excitation electron processes
741 189
742 23-06-2016, MK 190 23-06-2016, MK
743 - G4Scheduler: move G4IosFlagsSaver to Process 191 - G4Scheduler: move G4IosFlagsSaver to Process()
744 192
745 3-06-2016, MK, tag emdna-V10-02-25 193 3-06-2016, MK, tag emdna-V10-02-25
746 - G4DNAScreenedRutherfordElasticModel: modify 194 - G4DNAScreenedRutherfordElasticModel: modify handling of energy boundaries
747 at init time 195 at init time
748 - G4DNAUeharaScreenedRutherfordElasticModel: m 196 - G4DNAUeharaScreenedRutherfordElasticModel: move up "if(isInitialised)"
749 197
750 3-06-2016, MK, tag emdna-V10-02-24 198 3-06-2016, MK, tag emdna-V10-02-24
751 - G4DNAScreenedRutherfordElasticModel.hh: remo 199 - G4DNAScreenedRutherfordElasticModel.hh: remove killBelowEnergy,
752 SetKillBelowThreshold deprecated 200 SetKillBelowThreshold deprecated
753 - G4DNAScreenedRutherfordElasticModel.cc: remo 201 - G4DNAScreenedRutherfordElasticModel.cc: remove killBelowEnergy, modify init to
754 prevent erasing/rewriting data (use isInit) 202 prevent erasing/rewriting data (use isInit)
755 - G4DNAChampionElasticModel.hh: rearrange decl 203 - G4DNAChampionElasticModel.hh: rearrange declaration of attributes
756 - G4DNAChampionElasticModel.cc: move up if (i 204 - G4DNAChampionElasticModel.cc: move up if (isInitialised) { return; }
757 - G4DNAUeharaScreenedRutherfordElasticModel.cc << 205 - G4DNAUeharaScreenedRutherfordElasticModel.cc: add exception at init time if
758 model used for another part than e- 206 model used for another part than e-
759 207
760 1-06-2016, MK, tag emdna-V10-02-23 208 1-06-2016, MK, tag emdna-V10-02-23
761 - G4DNAChemistryManager::CreateWaterMolecule: 209 - G4DNAChemistryManager::CreateWaterMolecule: reverse electronicLevel
762 logic for interface with physics models 210 logic for interface with physics models
763 211
764 31-05-2016, MK, tag emdna-V10-02-22 212 31-05-2016, MK, tag emdna-V10-02-22
765 - G4DNAChampionElasticModel.cc: reset check ek 213 - G4DNAChampionElasticModel.cc: reset check ekin >= LowEnergyLimit()
766 214
767 28-05-2016, MK, tag emdna-V10-02-21 215 28-05-2016, MK, tag emdna-V10-02-21
768 - G4DNAChampionElasticModel.cc: add missing "s 216 - G4DNAChampionElasticModel.cc: add missing "sigma = ..." after
769 one of the previous tags 217 one of the previous tags
770 218
771 19-05-2016, MK, tag emdna-V10-02-20 219 19-05-2016, MK, tag emdna-V10-02-20
772 - G4ITNavigator: remove warnings on gcc6.1 220 - G4ITNavigator: remove warnings on gcc6.1
773 221
774 17-05-2016, MK, tag emdna-V10-02-19 222 17-05-2016, MK, tag emdna-V10-02-19
775 - G4DNAElectronSolvation, G4DNAOneStepThermali 223 - G4DNAElectronSolvation, G4DNAOneStepThermalizationModel:
776 correct model and process names for solvation 224 correct model and process names for solvation
777 225
778 12-05-2016, MK, tag emdna-V10-02-18 226 12-05-2016, MK, tag emdna-V10-02-18
779 - G4DNAChampionElasticModel.hh: << 227 - G4DNAChampionElasticModel.hh:
780 * GetKillBelowThreshold is deprecated 228 * GetKillBelowThreshold is deprecated
781 * Removed attributes: killBelowEnergy, lowEne << 229 * Removed attributes: killBelowEnergy, lowEnergyLimit, highEnergyLimit,
782 tableFile, tableData 230 tableFile, tableData
783 * Method Theta(): remove G4ParticleDefinition 231 * Method Theta(): remove G4ParticleDefinition * aParticleDefinition
784 - G4DNAUeharaScreenedRutherfordElasticModel.hh 232 - G4DNAUeharaScreenedRutherfordElasticModel.hh:
785 * SetKillBelowThreshold, GetKillBelowThreshol 233 * SetKillBelowThreshold, GetKillBelowThreshold are depreceted
786 (use G4LowECapture or G4DNAElectronSolvatatio 234 (use G4LowECapture or G4DNAElectronSolvatation)
787 * SelectHighEnergyLimit uses SetHighEnergyLim << 235 * SelectHighEnergyLimit uses SetHighEnergyLimit instead and a warning is
788 emitted when used 236 emitted when used
789 * Removed attributes: killBelowEnergy, lowEne 237 * Removed attributes: killBelowEnergy, lowEnergyLimit, highEnergyLimit
790 - G4DNAChampionElasticModel.cc & G4DNAUeharaSc 238 - G4DNAChampionElasticModel.cc & G4DNAUeharaScreenedRutherfordElasticModel.cc:
791 * Verbose check only if preprocessor flag is 239 * Verbose check only if preprocessor flag is triggered -> recompile
792 * Energy boundaries checked in Initialise() - 240 * Energy boundaries checked in Initialise() -> reset if needed
793 * Call to G4Electron removed in Initialise() 241 * Call to G4Electron removed in Initialise() -> check using particle name
794 * Cleanup CrossSectionPerVolume by removing u 242 * Cleanup CrossSectionPerVolume by removing unnecessary checks and calls to map
795 * SampleSecondaries(): remove "kill below thr 243 * SampleSecondaries(): remove "kill below threshold" and energy checks
796 * G4DNAChampionElasticModel::Theta remove che 244 * G4DNAChampionElasticModel::Theta remove check particle == G4Electron
797 - G4DNAOneStepThermalizationModel.cc: 245 - G4DNAOneStepThermalizationModel.cc:
798 * Check verbose flag if a preprocessor flag i 246 * Check verbose flag if a preprocessor flag is trigerred
799 * Remove call to G4Electron at initialization 247 * Remove call to G4Electron at initialization time
800 - G4DNATransformElectronModel.cc: 248 - G4DNATransformElectronModel.cc:
801 * Check verbose flag if a preprocessor flag i 249 * Check verbose flag if a preprocessor flag is trigerred
802 * Remove call to G4Electron at initialization 250 * Remove call to G4Electron at initialization time
803 * Add check if(G4DNAChemistryManager::IsActiv << 251 * Add check if(G4DNAChemistryManager::IsActivated()) then solvated electron
804 created; otherwise, the primary electron is 252 created; otherwise, the primary electron is killed
805 253
806 30-04-2016, MK, tag emdna-V10-02-17 254 30-04-2016, MK, tag emdna-V10-02-17
807 - G4VUserChemistryList: Add flag fIsPhysicsCon 255 - G4VUserChemistryList: Add flag fIsPhysicsConstructor
808 256
809 30-04-2016, MK, tag emdna-V10-02-16 257 30-04-2016, MK, tag emdna-V10-02-16
810 - G4VUserChemistryList: remove a if statement 258 - G4VUserChemistryList: remove a if statement
811 - G4MoleculeCounter: at initialization time, p << 259 - G4MoleculeCounter: at initialization time, prevent creating entries for
812 unregistered molecule definition 260 unregistered molecule definition
813 261
814 22-04-2016, MK, tag emdna-V10-02-15 262 22-04-2016, MK, tag emdna-V10-02-15
815 - G4DNAElectronSolvatation -> G4DNAElectronSol 263 - G4DNAElectronSolvatation -> G4DNAElectronSolvation
816 - G4DNASancheExcitationModel: remove warning w 264 - G4DNASancheExcitationModel: remove warning when SANCHE_VERBOSE is OFF
817 265
818 22-04-2016, MK, tag emdna-V10-02-14 266 22-04-2016, MK, tag emdna-V10-02-14
819 - G4DNAMeltonAttachmentModel, G4DNASancheExcit << 267 - G4DNAMeltonAttachmentModel, G4DNASancheExcitationModel:
820 remove usage of internal energy boundaries 268 remove usage of internal energy boundaries
821 269
822 19-03-2016, SI, tag emdna-V10-02-13 270 19-03-2016, SI, tag emdna-V10-02-13
823 - added nrj extensibility to SR and USR models 271 - added nrj extensibility to SR and USR models
824 272
825 11-03-2016, SI, tag emdna-V10-02-12 273 11-03-2016, SI, tag emdna-V10-02-12
826 -roll back to files in emdna-V10-02-06 274 -roll back to files in emdna-V10-02-06
827 275
828 10-03-2016, SI, tag emdna-V10-02-11 276 10-03-2016, SI, tag emdna-V10-02-11
829 -further cleaning of G4DNAUeharaScreenedRuther 277 -further cleaning of G4DNAUeharaScreenedRutherfordElasticModel
830 and G4DNAScreenedRutherfordElasticModel 278 and G4DNAScreenedRutherfordElasticModel
831 279
832 10-03-2016, SI, tag emdna-V10-02-10 280 10-03-2016, SI, tag emdna-V10-02-10
833 -further cleaning of G4DNAUeharaScreenedRuther 281 -further cleaning of G4DNAUeharaScreenedRutherfordElasticModel
834 282
835 07-03-2016, SI, tag emdna-V10-02-09 283 07-03-2016, SI, tag emdna-V10-02-09
836 -added possibility to extend applicability lim 284 -added possibility to extend applicability limit
837 of G4DNAUeharaScreenedRutherfordElasticModel 285 of G4DNAUeharaScreenedRutherfordElasticModel
838 286
839 06-03-2016, SI, tag emdna-V10-02-08 287 06-03-2016, SI, tag emdna-V10-02-08
840 -removed useless G4Pow declaration 288 -removed useless G4Pow declaration
841 289
842 04-03-2016, SI, tag emdna-V10-02-07 290 04-03-2016, SI, tag emdna-V10-02-07
843 -replaced std::log by G4Log 291 -replaced std::log by G4Log
844 -replaced std::log10() by G4Log()/g4pow->logZ( 292 -replaced std::log10() by G4Log()/g4pow->logZ(10)
845 293
846 02-03-2016, SI, tag emdna-V10-02-06 294 02-03-2016, SI, tag emdna-V10-02-06
847 -replaced std::exp by G4Exp 295 -replaced std::exp by G4Exp
848 296
849 02-03-2016, SI, tag emdna-V10-02-05 297 02-03-2016, SI, tag emdna-V10-02-05
850 -replaced std::exp by G4Exp 298 -replaced std::exp by G4Exp
851 299
852 02-03-2016, SI, tag emdna-V10-02-04 300 02-03-2016, SI, tag emdna-V10-02-04
853 -replaced std::exp by G4Exp 301 -replaced std::exp by G4Exp
854 302
855 01-03-2016, SI, tag emdna-V10-02-03 303 01-03-2016, SI, tag emdna-V10-02-03
856 * update of fast computation of: 304 * update of fast computation of:
857 -G4DNAScreenRutherfordElasticModel 305 -G4DNAScreenRutherfordElasticModel
858 -G4DNAUeharaScreenRutherfordElasticModel 306 -G4DNAUeharaScreenRutherfordElasticModel
859 by S. Okada (KEK, JP) 307 by S. Okada (KEK, JP)
860 308
861 17-02-2016, MK, tag emdna-V10-02-02 309 17-02-2016, MK, tag emdna-V10-02-02
862 * G4MoleculeCounter: remove check of c++ versi 310 * G4MoleculeCounter: remove check of c++ version for unique_ptr/auto_ptr selection
863 311
864 16-12-2015, SI, tag emdna-V10-02-01 312 16-12-2015, SI, tag emdna-V10-02-01
865 * Ionisation models : in SampleSecondaries: << 313 * Ionisation models : in SampleSecondaries:
866 added protection on energy for interpolation m 314 added protection on energy for interpolation method change
867 315
868 16-12-2015, SI, tag emdna-V10-02-00 316 16-12-2015, SI, tag emdna-V10-02-00
869 * G4DNAIonElasticModel::SampleSecondaries: add << 317 * G4DNAIonElasticModel::SampleSecondaries: added protection on
870 energy 318 energy
871 319
872 13-11-2015, MK, tag emdna-V10-01-55 320 13-11-2015, MK, tag emdna-V10-01-55
873 * G4MoleculeCounter::Use / InUse => move imple 321 * G4MoleculeCounter::Use / InUse => move implementation to source
874 file 322 file
875 323
876 10-11-2015, MK, tag emdna-V10-01-54 324 10-11-2015, MK, tag emdna-V10-01-54
877 * remove unused variables 325 * remove unused variables
878 326
879 10-11-2015, MK, tag emdna-V10-01-53 327 10-11-2015, MK, tag emdna-V10-01-53
880 * Coverity fixes 328 * Coverity fixes
881 329
882 06-11-2015, MK, tag emdna-V10-01-52 330 06-11-2015, MK, tag emdna-V10-01-52
883 * G4DNAWaterDissociationDisplacer: remove usel 331 * G4DNAWaterDissociationDisplacer: remove useless verbose
884 332
885 06-11-2015, MK, tag emdna-V10-01-51 333 06-11-2015, MK, tag emdna-V10-01-51
886 * G4FastList.hh : use WatcherSet::iterator to 334 * G4FastList.hh : use WatcherSet::iterator to avoid compilation errors
887 on x86_64-slc6-gcc49-Seq-BoundsCheck-UseIntern 335 on x86_64-slc6-gcc49-Seq-BoundsCheck-UseInternalCLHEP
888 336
889 06-11-2015, MK, tag emdna-V10-01-50 337 06-11-2015, MK, tag emdna-V10-01-50
890 * Avoid indirect include of G4TrackState to G4 338 * Avoid indirect include of G4TrackState to G4physicslists category
891 * Reorganize includes 339 * Reorganize includes
892 * Add G4ITStepProcessorState_Lock.hh 340 * Add G4ITStepProcessorState_Lock.hh
893 341
894 06-11-2015, MK, tag emdna-V10-01-49 342 06-11-2015, MK, tag emdna-V10-01-49
895 * G4MoleculeCounter: do not initialize compDou 343 * G4MoleculeCounter: do not initialize compDoubleWithPrecision::fPrecision
896 to other value than 0 - causing compilation er 344 to other value than 0 - causing compilation errors on windows
897 * G4DNAOneStepThermalizationModel: do not incl 345 * G4DNAOneStepThermalizationModel: do not include G4ITNavigator in the header
898 but in the source file - causing crashes on wi 346 but in the source file - causing crashes on windows
899 347
900 04-11-2015, MK, tag emdna-V10-01-48 348 04-11-2015, MK, tag emdna-V10-01-48
901 * G4DNARevertProbability: added and used in G4 349 * G4DNARevertProbability: added and used in G4DNAWaterDissociationDisplacer
902 * utils/sources.cmake: G4DNARevertProbability. 350 * utils/sources.cmake: G4DNARevertProbability.hh added
903 * G4DNAWaterDissociationDisplacer: fix and spe 351 * G4DNAWaterDissociationDisplacer: fix and speed up distributions
904 * models/GNUmakefile: add missing dependency 352 * models/GNUmakefile: add missing dependency
905 * G4DNAOneStepThermalizationModel: delete navi 353 * G4DNAOneStepThermalizationModel: delete navigator state when model
906 is deleted 354 is deleted
907 * G4FastList.icc: use typedef WatcherSet even 355 * G4FastList.icc: use typedef WatcherSet even when iterators are used
908 * G4ITModelProcessor: add RegisterModel, GetCo 356 * G4ITModelProcessor: add RegisterModel, GetComputeTimeStep +
909 fComputeTimeStep & fComputeReaction flags 357 fComputeTimeStep & fComputeReaction flags
910 * G4DNAElectronHoleRecombination: enable using << 358 * G4DNAElectronHoleRecombination: enable using this model even when not
911 all dissociation products have been defined 359 all dissociation products have been defined (they will just not be taken
912 into account) 360 into account)
913 * G4DNAMolecularReactionTable: delete reaction 361 * G4DNAMolecularReactionTable: delete reaction data when table is deleted
914 362
915 03-11-2015, MK, tag emdna-V10-01-47 363 03-11-2015, MK, tag emdna-V10-01-47
916 * G4Scheduler: Update time before G4ITStepProc 364 * G4Scheduler: Update time before G4ITStepProcessor::DoIt
917 * G4ITStepProcessor::DoIt : reset leading trac << 365 * G4ITStepProcessor::DoIt : reset leading tracks at the end of
918 the call 366 the call
919 367
920 03-11-2015, MK, tag emdna-V10-01-46 368 03-11-2015, MK, tag emdna-V10-01-46
921 * G4MolecularDissociation 369 * G4MolecularDissociation
922 * G4DNAOneStepSolvatationModel -> G4DNAOneStep 370 * G4DNAOneStepSolvatationModel -> G4DNAOneStepThermalizationModel
923 Avoid placing products outside volume of the 371 Avoid placing products outside volume of the mother track
924 (causing navigator complains) 372 (causing navigator complains)
925 << 373
926 03-11-2015, MK, tag emdna-V10-01-45 374 03-11-2015, MK, tag emdna-V10-01-45
927 * G4Serialize: Add definition in header for G4 375 * G4Serialize: Add definition in header for G4String
928 376
929 02-11-2015, MK, tag emdna-V10-01-44 377 02-11-2015, MK, tag emdna-V10-01-44
930 * G4Serialize: remove inline in front of templ 378 * G4Serialize: remove inline in front of template
931 * molecules: fix unit tests 379 * molecules: fix unit tests
932 * G4DNAElectronHoleRecombination: add missing 380 * G4DNAElectronHoleRecombination: add missing check on G4MoleculeCounter::InUse
933 * G4MoleculeCounter: add a flag to check or no 381 * G4MoleculeCounter: add a flag to check or not against scheduler time
934 * G4MoleculeTable: do not store G4MolecularCon << 382 * G4MoleculeTable: do not store G4MolecularConf anymore
935 -> G4MolecularConfMan is taking care of this 383 -> G4MolecularConfMan is taking care of this
936 << 384
937 30-10-2015, MK, tag emdna-V10-01-43 385 30-10-2015, MK, tag emdna-V10-01-43
938 * Bug solved in G4MoleculeCounter << 386 * Bug solved in G4MoleculeCounter
939 and made compatible wih G4DNAElectronHoleRec 387 and made compatible wih G4DNAElectronHoleRecombination (temporary)
940 * Unit tests corrected 388 * Unit tests corrected
941 * G4VITDiscreteProcess added 389 * G4VITDiscreteProcess added
942 * G4ReactionTableMessenger added 390 * G4ReactionTableMessenger added
943 * Intermediate update for 10.2 release 391 * Intermediate update for 10.2 release
944 << 392
945 27-10-2015, MK, tag emdna-V10-01-42 393 27-10-2015, MK, tag emdna-V10-01-42
946 * G4ITStepProcessor: clean dynamic_cast to G4V 394 * G4ITStepProcessor: clean dynamic_cast to G4VITProcess
947 << 395
948 26-10-2015, MK, tag emdna-V10-01-41 396 26-10-2015, MK, tag emdna-V10-01-41
949 * Sanche model: try to solve std::vector out o 397 * Sanche model: try to solve std::vector out of bounds
950 398
951 23-10-2015, MK, tag emdna-V10-01-40 399 23-10-2015, MK, tag emdna-V10-01-40
952 * remove all CLHEP::shared_ptr usage 400 * remove all CLHEP::shared_ptr usage
953 << 401
954 23-10-2015, CV, SM, tag emdna-V10-01-39 402 23-10-2015, CV, SM, tag emdna-V10-01-39
955 * Addded base class G4VDNAPTBModel << 403 * Addded base class G4VDNAPTBModel
956 404
957 28-09-2015, SI, tag emdna-V10-01-38 405 28-09-2015, SI, tag emdna-V10-01-38
958 * updated ion selection in G4DNARuddIonisation 406 * updated ion selection in G4DNARuddIonisationExtendedModel.cc for Z>2
959 407
960 19-09-2015, MK, tag emdna-V10-01-37 408 19-09-2015, MK, tag emdna-V10-01-37
961 * added proton ionisation scaling in G4DNABorn 409 * added proton ionisation scaling in G4DNABornIonisationModel1*.cc
962 * changed ion selection in G4DNARuddIonisation 410 * changed ion selection in G4DNARuddIonisationExtendedModel.cc for Z>2
963 411
964 17-09-2015, MK, tag emdna-V10-01-36 412 17-09-2015, MK, tag emdna-V10-01-36
965 * G4MoleculeGun: Remove compilation warnings 413 * G4MoleculeGun: Remove compilation warnings
966 414
967 04-09-2015 MK, tag emdna-V10-01-35 415 04-09-2015 MK, tag emdna-V10-01-35
968 * Fix G4MoleculeGun compilation errors 416 * Fix G4MoleculeGun compilation errors
969 417
970 03-09-2015 SI, tag emdna-V10-01-34 418 03-09-2015 SI, tag emdna-V10-01-34
971 * Added stationary regime to all inelastic mod 419 * Added stationary regime to all inelastic models
972 420
973 19-08-2015, MK 421 19-08-2015, MK
974 * Update G4MoleculeGun & G4MoleculeGunMessenge 422 * Update G4MoleculeGun & G4MoleculeGunMessenger:
975 - compatible with both Smoluchowski & Gilles 423 - compatible with both Smoluchowski & Gillespie models
976 424
977 15-08-2015, S.Incerti, tag emdna-V10-01-33 425 15-08-2015, S.Incerti, tag emdna-V10-01-33
978 * Added easier handling of cumulative proba. i 426 * Added easier handling of cumulative proba. in SR elastic models
979 427
980 13-08-2015, G.Cosmo, tag emdna-V10-01-32, 31 428 13-08-2015, G.Cosmo, tag emdna-V10-01-32, 31
981 * Fixed compilation warning on clang for misma 429 * Fixed compilation warning on clang for mismatch class/struct in
982 declaration of G4MoleculeShoot. 430 declaration of G4MoleculeShoot.
983 431
984 13-08-2015, G.Cosmo, tag emdna-V10-01-30 432 13-08-2015, G.Cosmo, tag emdna-V10-01-30
985 * Fixed compilation warning on clang for misma 433 * Fixed compilation warning on clang for mismatch class/struct in
986 declaration of G4MoleculeShootMessenger. 434 declaration of G4MoleculeShootMessenger.
987 435
988 12-08-2015, MK, tag emdna-V10-01-29 436 12-08-2015, MK, tag emdna-V10-01-29
989 * Add G4Serialize in the build tree temporaril 437 * Add G4Serialize in the build tree temporarily
990 438
991 12-08-2015, MK, tag emdna-V10-01-28 439 12-08-2015, MK, tag emdna-V10-01-28
992 * G4Serialize added 440 * G4Serialize added
993 441
994 12-08-2015, MK 442 12-08-2015, MK
995 * G4memory : quick removal of CLHEP::shared_pt 443 * G4memory : quick removal of CLHEP::shared_ptr dependency
996 444
997 24-07-2015, MK 445 24-07-2015, MK
998 - G4MolecularReactionTable 446 - G4MolecularReactionTable
999 * Add get methods 447 * Add get methods
1000 - G4MoleculeGun, G4MoleculeGunMessenger 448 - G4MoleculeGun, G4MoleculeGunMessenger
1001 * Molecule gun : place randomly in a box 449 * Molecule gun : place randomly in a box
1002 450
1003 15-07-2015, MK 451 15-07-2015, MK
1004 - G4DNAAttachment, G4DNAChargeDecrease, G4DNA << 452 - G4DNAAttachment, G4DNAChargeDecrease, G4DNADissociation,
1005 G4DNAExcitation, G4DNAIonisation 453 G4DNAExcitation, G4DNAIonisation
1006 * processes & models initialisation again 454 * processes & models initialisation again
1007 455
1008 15-07-2015, MK, tag emdna-V10-01-26 456 15-07-2015, MK, tag emdna-V10-01-26
1009 -G4ITModelProcessor & G4ITStepProcessor: 457 -G4ITModelProcessor & G4ITStepProcessor:
1010 * add macro to prevent warnings in non-verbo 458 * add macro to prevent warnings in non-verbose mode
1011 459
1012 11-07-2015, MK, tag emdna-V10-01-25 460 11-07-2015, MK, tag emdna-V10-01-25
1013 - Add G4IosFlagsSaver.hh to sources.cmake 461 - Add G4IosFlagsSaver.hh to sources.cmake
1014 - G4IosFlagsSaver.hh add an extra line of the 462 - G4IosFlagsSaver.hh add an extra line of the end of the file
1015 463
1016 10-07-2015, MK, tag emdna-V10-01-24 464 10-07-2015, MK, tag emdna-V10-01-24
1017 - G4DNA Processes : correct setup of energy b 465 - G4DNA Processes : correct setup of energy boundaries
1018 - G4DNAElectronHoleRecombination remove verbo 466 - G4DNAElectronHoleRecombination remove verbose
1019 - G4DNADingfelderChargeDecreaseModel: add hol 467 - G4DNADingfelderChargeDecreaseModel: add hole creation
1020 - G4DNAEmfietzoglouXModel: specify energy bou 468 - G4DNAEmfietzoglouXModel: specify energy boundaries in constructor
1021 469
1022 08-07-2015, MK, tag emdna-V10-01-23 470 08-07-2015, MK, tag emdna-V10-01-23
1023 - G4ITLeadingTracks added 471 - G4ITLeadingTracks added
1024 - G4ITSteppingVerbose added 472 - G4ITSteppingVerbose added
1025 - G4IosFlagsSaver added 473 - G4IosFlagsSaver added
1026 - G4VITSteppingVerbose & G4ITSteppingVerbose << 474 - G4VITSteppingVerbose & G4ITSteppingVerbose added
1027 * new UI command /chem/tracking/verbose 1,2 << 475 * new UI command /chem/tracking/verbose 1,2,3 ...
1028 - G4MoleculeDefinition: 476 - G4MoleculeDefinition:
1029 ::SetFormatedName added 477 ::SetFormatedName added
1030 ::NewConfiguration methods added 478 ::NewConfiguration methods added
1031 ::NewConfiguration added 479 ::NewConfiguration added
1032 ::AddDecayChannel per G4MolecularConfigurat 480 ::AddDecayChannel per G4MolecularConfiguration or conf label added
1033 And replace ::AddDecayChannel for a molecul 481 And replace ::AddDecayChannel for a molecule model
1034 ::Finalize added 482 ::Finalize added
1035 - G4MolecularConfiguration: << 483 - G4MolecularConfiguration:
1036 * new configuration can be defined by label 484 * new configuration can be defined by labels
1037 * Add Finalize method and add exception if 485 * Add Finalize method and add exception if attempt to modified
1038 the G4MolecularConfiguration is done after 486 the G4MolecularConfiguration is done after finalization
1039 - G4MolecularDissociationChannel & G4DNAMolec << 487 - G4MolecularDissociationChannel & G4DNAMolecularReactionTable &
1040 G4DNAMolecularEncounterStepper use G4Molecula << 488 G4DNAMolecularEncounterStepper use G4MolecularConfiguration rather
1041 than molecule models 489 than molecule models
1042 - G4Molecule add constructor where only G4Mol 490 - G4Molecule add constructor where only G4MolecularConfiguration is specified
1043 - G4Scheduler : remove entirely track specifi 491 - G4Scheduler : remove entirely track specification from this class
1044 - G4ITXProcess : deal with tracks 492 - G4ITXProcess : deal with tracks
1045 - G4ITTrackingManager is a "service" to start 493 - G4ITTrackingManager is a "service" to start and end tracking
1046 - G4DNAElectronHoleRecombination added 494 - G4DNAElectronHoleRecombination added
1047 495
1048 06-07-2015, Shogo Okada, SI, tag emdna-V10-01 496 06-07-2015, Shogo Okada, SI, tag emdna-V10-01-22
1049 - G4DNAEmfietzoglouIonisationModel: removed c << 497 - G4DNAEmfietzoglouIonisationModel: removed condition for
1050 fasterCode usage on shell selection. 498 fasterCode usage on shell selection.
1051 499
1052 26-06-2015, MK 500 26-06-2015, MK
1053 - G4DNAIonElasticModel: modify "validated" to << 501 - G4DNAIonElasticModel: modify "validated" to "activated" in
1054 warning message description 502 warning message description
1055 503
1056 16-06-205, MK 504 16-06-205, MK
1057 - Add G4Scheduler::GetGun() 505 - Add G4Scheduler::GetGun()
1058 506
1059 16-06-2015, MK, tag emdna-V10-01-21 507 16-06-2015, MK, tag emdna-V10-01-21
1060 - G4DNAElastic.cc : add elseif(name == ... 508 - G4DNAElastic.cc : add elseif(name == ...
1061 - G4DNAIonElasticModel: clean and fix double 509 - G4DNAIonElasticModel: clean and fix double free
1062 510
1063 12-06-2015, MK, tag emdna-V10-01-20 511 12-06-2015, MK, tag emdna-V10-01-20
1064 - remove virtual keyword from G4IT::GetPositi 512 - remove virtual keyword from G4IT::GetPosition()
1065 513
1066 04-06-2015, MK 514 04-06-2015, MK
1067 - just cosmetics 515 - just cosmetics
1068 - remove virtual keyword from G4IT::operator[ 516 - remove virtual keyword from G4IT::operator[]
1069 517
1070 26-05-2015, Robert Hatcher, tag emdna-V10-01- 518 26-05-2015, Robert Hatcher, tag emdna-V10-01-19
1071 - Remove unnecessary "using namespace std" fr 519 - Remove unnecessary "using namespace std" from various headers
1072 that causes problems w/ G4AnyMethod & G4Gen 520 that causes problems w/ G4AnyMethod & G4GenericPhysicsList
1073 when using clang and/or vc12 521 when using clang and/or vc12
1074 - Fully qualify std::string elsewhere as need 522 - Fully qualify std::string elsewhere as needed to adjust
1075 523
1076 22-05-2015, John Allison, tag emdna-V10-01-18 524 22-05-2015, John Allison, tag emdna-V10-01-18
1077 - G4ITTrackHolder.cc: Replaced "G4Threading:: 525 - G4ITTrackHolder.cc: Replaced "G4Threading::IsWorkerThread() == false" by
1078 "G4Threading::IsMasterThread()". 526 "G4Threading::IsMasterThread()".
1079 527
1080 17-05-2015, MK, tag emdna-V10-01-17 528 17-05-2015, MK, tag emdna-V10-01-17
1081 - G4DNABornIonisationModel1/2 & G4DNABornExci 529 - G4DNABornIonisationModel1/2 & G4DNABornExcitationModel2: remove unused variables
1082 - Correct sources.cmake 530 - Correct sources.cmake
1083 - Born headears: includes both model versions << 531 - Born headears: includes both model versions when proxy header is included
1084 532
1085 16-05-2015, MK, tag emdna-V10-01-16 533 16-05-2015, MK, tag emdna-V10-01-16
1086 - Add G4DNAEmfietzoglouExcitationModel 534 - Add G4DNAEmfietzoglouExcitationModel
1087 - Add G4DNAEmfietzoglouIonisationModel 535 - Add G4DNAEmfietzoglouIonisationModel
1088 - Add G4DNAUeharaScreenedRutherfordElasticMod 536 - Add G4DNAUeharaScreenedRutherfordElasticModel
1089 - Add G4DNABornIonisationModel2 (temporary) 537 - Add G4DNABornIonisationModel2 (temporary)
1090 - Add G4DNABornExcitationModel2 (temporary) 538 - Add G4DNABornExcitationModel2 (temporary)
1091 539
1092 15-05-2015, MK, tag emdna-V10-01-15 540 15-05-2015, MK, tag emdna-V10-01-15
1093 - Postpone G4DNASmoluchowskiDiffusion until c 541 - Postpone G4DNASmoluchowskiDiffusion until c++11 is adopted
1094 542
1095 14-05-2015, MK, tag emdna-V10-01-14 543 14-05-2015, MK, tag emdna-V10-01-14
1096 - G4DNASmoluchowskiDiffusion: std::sqrt -> sq 544 - G4DNASmoluchowskiDiffusion: std::sqrt -> sqrt
1097 545
1098 14-05-2015, MK, tag emdna-V10-01-13 546 14-05-2015, MK, tag emdna-V10-01-13
1099 - G4DNASmoluchowskiDiffusion: try to solve co 547 - G4DNASmoluchowskiDiffusion: try to solve compilation error
1100 - G4ITReaction: try to solve compilation erro 548 - G4ITReaction: try to solve compilation error
1101 549
1102 12-05-2015, MK, tag emdna-V10-01-12 550 12-05-2015, MK, tag emdna-V10-01-12
1103 - G4DNASmoluchowskiDiffusion: try to solve co 551 - G4DNASmoluchowskiDiffusion: try to solve compilation error
1104 552
1105 12-05-2015, MK, tag emdna-V10-01-11 553 12-05-2015, MK, tag emdna-V10-01-11
1106 - Add G4DNASmoluchowskiDiffusion to the build 554 - Add G4DNASmoluchowskiDiffusion to the build tree
1107 555
1108 11-05-2015, MK, tag emdna-V10-01-10 556 11-05-2015, MK, tag emdna-V10-01-10
1109 - G4DNABornExcitationModel: 557 - G4DNABornExcitationModel:
1110 +Add GetPartialCrossSection 558 +Add GetPartialCrossSection
1111 +Code cleaning 559 +Code cleaning
1112 - G4DNAMillerGreenExcitationModel: 560 - G4DNAMillerGreenExcitationModel:
1113 +Add GetPartialCrossSection 561 +Add GetPartialCrossSection
1114 - G4DNAChemistryManager::GetValue(...) added 562 - G4DNAChemistryManager::GetValue(...) added
1115 563
1116 02-05-2015, MK 564 02-05-2015, MK
1117 - Update G4TrackState & related classes 565 - Update G4TrackState & related classes
1118 - G4DNABrownianTransportation: << 566 - G4DNABrownianTransportation:
1119 +Add constructor & destructor to G4Brownian << 567 +Add constructor & destructor to G4BrownianAction
1120 +comment useless method 568 +comment useless method
1121 - G4Scheduler: << 569 - G4Scheduler:
1122 +Add fStopTime+Watched times+PrintWhyDoYouS << 570 +Add fStopTime+Watched times+PrintWhyDoYouStop method (code was existing before)
1123 +remove fTmpEndTime << 571 +remove fTmpEndTime
1124 +Add CanICarryOn 572 +Add CanICarryOn
1125 - add G4DNASmoluchowskiDiffusion *PRELIMINARY 573 - add G4DNASmoluchowskiDiffusion *PRELIMINARY*
1126 574
1127 18-03-2015, MK, tag emdna-V10-01-08 575 18-03-2015, MK, tag emdna-V10-01-08
1128 - Same as before, just add the missing Histor 576 - Same as before, just add the missing History file
1129 577
1130 18-03-2015, MK, tag emdna-V10-01-07 578 18-03-2015, MK, tag emdna-V10-01-07
1131 - G4UserTimeStepAction::UserReactionAction : 579 - G4UserTimeStepAction::UserReactionAction : vector of products becomes a pointer
1132 instead of a reference 580 instead of a reference
1133 581
1134 12-02-2015, MK, tag emdna-V10-01-06 582 12-02-2015, MK, tag emdna-V10-01-06
1135 - G4ITReaction: Remove "gAll" introduced for 583 - G4ITReaction: Remove "gAll" introduced for testing
1136 - G4ITModelProcessor: Remove "assert" introdu 584 - G4ITModelProcessor: Remove "assert" introduced for testing
1137 - G4ITTransportation: Remove extra parenthesi << 585 - G4ITTransportation: Remove extra parenthesis in the undef of PrepareState
1138 586
1139 11-02-2015, MK, tag emdna-V10-01-05 587 11-02-2015, MK, tag emdna-V10-01-05
1140 - Fix reproductibility of the chemistry modul 588 - Fix reproductibility of the chemistry module
1141 - Fix the "no reaction table found" bug: G4IT 589 - Fix the "no reaction table found" bug: G4ITReaction class created
1142 - G4shared_ptr refers to std::shared_ptr when 590 - G4shared_ptr refers to std::shared_ptr when C++11 is activated
1143 591
1144 16-01-2015, SI, tag emdna-V10-01-04 592 16-01-2015, SI, tag emdna-V10-01-04
1145 - added Fe56 into G4DNARuddIonisationExtended 593 - added Fe56 into G4DNARuddIonisationExtendedModel
1146 594
1147 14-12-2014, MK, tag emdna-V10-01-03 595 14-12-2014, MK, tag emdna-V10-01-03
1148 - BornIonisation: correct array cleaning 596 - BornIonisation: correct array cleaning
1149 - ScreenRutherfordElastic: correct retrieval << 597 - ScreenRutherfordElastic: correct retrieval of water density
1150 598
1151 13-12-2014, SI, tag emdna-V10-01-02 599 13-12-2014, SI, tag emdna-V10-01-02
1152 - Added elastic model by H. Tran. 600 - Added elastic model by H. Tran.
1153 601
1154 12-12-2014, G.Cosmo, tag emdna-V10-01-01 602 12-12-2014, G.Cosmo, tag emdna-V10-01-01
1155 - Explicitly initialise to zero TLS pointers 603 - Explicitly initialise to zero TLS pointers in G4KDNode.hh and G4ITFinder.icc
1156 to allow for compilation on Linux/clang-3.5 604 to allow for compilation on Linux/clang-3.5.
1157 605
1158 05-12-2014, G.Cosmo, tag emdna-V10-01-00 606 05-12-2014, G.Cosmo, tag emdna-V10-01-00
1159 - Corrected sources.cmake in management and m 607 - Corrected sources.cmake in management and molecules/management, to
1160 include missing files: 608 include missing files:
1161 G4ITTransportationManager.icc 609 G4ITTransportationManager.icc
1162 G4KDNode.icc 610 G4KDNode.icc
1163 G4KDTree.icc 611 G4KDTree.icc
1164 G4MoleculeFinder.hh 612 G4MoleculeFinder.hh
1165 613
1166 01-12-2014, MK, tag emdna-V10-00-63 614 01-12-2014, MK, tag emdna-V10-00-63
1167 - Temporary fix for avoiding bad relocation o 615 - Temporary fix for avoiding bad relocation of Brownian particles
1168 It slows the computation by forcing the Brown 616 It slows the computation by forcing the Brownian particles to stop at the volumes' boundaries
1169 - Transform fStopAndAlive to fStopAndKill in 617 - Transform fStopAndAlive to fStopAndKill in G4DNABrownianTransportation
1170 when the particle has reached a boundary 618 when the particle has reached a boundary
1171 619
1172 28-11-2014, MK, tag emdna-V10-00-62 620 28-11-2014, MK, tag emdna-V10-00-62
1173 - Retag 621 - Retag
1174 622
1175 28-11-2014, MK, tag emdna-V10-00-61 623 28-11-2014, MK, tag emdna-V10-00-61
1176 - Fix chemistry initialization in standalone 624 - Fix chemistry initialization in standalone
1177 - Fix Brownian navigation 625 - Fix Brownian navigation
1178 - Some fixes related to scheduler 626 - Some fixes related to scheduler
1179 - Rename macro commands to reflect usage of s 627 - Rename macro commands to reflect usage of scheduler
1180 - Enhance comments 628 - Enhance comments
1181 629
1182 24-11-2014, MK, tag emdna-V10-00-60 630 24-11-2014, MK, tag emdna-V10-00-60
1183 - Remove a useless but also fatal (when chemi 631 - Remove a useless but also fatal (when chemistry is not activated) exception
1184 632
1185 24-11-2014, MK, tag emdna-V10-00-59 633 24-11-2014, MK, tag emdna-V10-00-59
1186 - Enhance doxygen comments in G4DNABrownianTr 634 - Enhance doxygen comments in G4DNABrownianTransportation
1187 - Remove useless verbose 635 - Remove useless verbose
1188 - Try to compile on all platforms 636 - Try to compile on all platforms
1189 - Correct initialization of G4DNAChemistryMan 637 - Correct initialization of G4DNAChemistryManager
1190 - Simplify initialization of chemistry from u 638 - Simplify initialization of chemistry from user applications
1191 Just registering constructor is enough to i 639 Just registering constructor is enough to initialized the chemistry
1192 640
1193 24-11-2014, MK, tag emdna-V10-00-58 641 24-11-2014, MK, tag emdna-V10-00-58
1194 - G4FastList: remove all friend declarations 642 - G4FastList: remove all friend declarations
1195 643
1196 22-11-2014, MK, tag emdna-V10-00-57 644 22-11-2014, MK, tag emdna-V10-00-57
1197 - Another attempt to compile G4FastList on al 645 - Another attempt to compile G4FastList on all platforms
1198 646
1199 22-11-2014, MK, tag emdna-V10-00-56 647 22-11-2014, MK, tag emdna-V10-00-56
1200 - Attempt to compile G4FastList on all platfo 648 - Attempt to compile G4FastList on all platforms
1201 649
1202 21-11-2014, MK, tag emdna-V10-00-55 650 21-11-2014, MK, tag emdna-V10-00-55
1203 - Attempt to compile G4FastList with clang 651 - Attempt to compile G4FastList with clang
1204 652
1205 21-11-2014, MK, tag emdna-V10-00-54 653 21-11-2014, MK, tag emdna-V10-00-54
1206 - Put back G4DNABrownianTransportation::fUseM 654 - Put back G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary
1207 to true as long as the small distances to bou << 655 to true as long as the small distances to boundaries sent back by the navigator
1208 are not understood 656 are not understood
1209 - Update G4ITNavigator2 to the G4Navigator of 657 - Update G4ITNavigator2 to the G4Navigator of John
1210 658
1211 21-11-2014, MK, tag emdna-V10-00-53 659 21-11-2014, MK, tag emdna-V10-00-53
1212 - Attempt to solve the 'No track found' bug b << 660 - Attempt to solve the 'No track found' bug by using G4FastList and
1213 G4ManyFastLists - A 'list watcher' is added 661 G4ManyFastLists - A 'list watcher' is added
1214 - G4DNABrownianTransportation::fUseMaximumTim 662 - G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary
1215 is false by default --> uses the random time << 663 is false by default --> uses the random time computation for crossing
1216 boundaries 664 boundaries
1217 665
1218 20-11-2014, SI, tag emdna-V10-00-52 666 20-11-2014, SI, tag emdna-V10-00-52
1219 - Improved error message for missing data in 667 - Improved error message for missing data in PW elastic model
1220 668
1221 08-11-2014, MK, tag emdna-V10-00-51 669 08-11-2014, MK, tag emdna-V10-00-51
1222 - Add an exception in G4MoleculeTable::GetMod 670 - Add an exception in G4MoleculeTable::GetModel/GetDefinition
1223 when the asked item is not found 671 when the asked item is not found
1224 672
1225 03-11-2014 MK, tag emdna-V10-00-50 673 03-11-2014 MK, tag emdna-V10-00-50
1226 - correct track creation by G4MoleculeGunMess 674 - correct track creation by G4MoleculeGunMessenger
1227 675
1228 03-11-2014 MK, tag emdna-V10-00-49 676 03-11-2014 MK, tag emdna-V10-00-49
1229 - Remove useless classes 677 - Remove useless classes
1230 - Correct a bug in G4MoleculeGun 678 - Correct a bug in G4MoleculeGun
1231 679
1232 28-10-2014 PA, tag emdna-V10-00-48 680 28-10-2014 PA, tag emdna-V10-00-48
1233 - correct compilation warnings 681 - correct compilation warnings
1234 682
1235 28-10-2014 PA, tag emdna-V10-00-47 683 28-10-2014 PA, tag emdna-V10-00-47
1236 - correct compilation warnings 684 - correct compilation warnings
1237 685
1238 28-10-2014 PA, tag emdna-V10-00-46 686 28-10-2014 PA, tag emdna-V10-00-46
1239 - correction in sources.cmake 687 - correction in sources.cmake
1240 688
1241 28-10-2014 PA, tag emdna-V10-00-45 689 28-10-2014 PA, tag emdna-V10-00-45
1242 - retag to add LEPTS 690 - retag to add LEPTS
1243 691
1244 28-10-2014 PA, tag emdna-V10-00-44 692 28-10-2014 PA, tag emdna-V10-00-44
1245 - add LEPTS 693 - add LEPTS
1246 694
1247 25-10-2014 MK, tag emdna-V10-00-43 695 25-10-2014 MK, tag emdna-V10-00-43
1248 - remove useless G4VITScheduler 696 - remove useless G4VITScheduler
1249 697
1250 25-10-2014 MK, tag emdna-V10-00-42 698 25-10-2014 MK, tag emdna-V10-00-42
1251 - correct warnings 699 - correct warnings
1252 700
1253 24-10-2014 MK, tag emdna-V10-00-41 701 24-10-2014 MK, tag emdna-V10-00-41
1254 - G4ITTimeStepper-->G4VScheduler 702 - G4ITTimeStepper-->G4VScheduler
1255 - G4ITStepManager-->G4ITScheduler 703 - G4ITStepManager-->G4ITScheduler
1256 - G4ITStepManager-->G4ITSchedulerMessenger 704 - G4ITStepManager-->G4ITSchedulerMessenger
1257 - G4AllITManager & G4ITManager deleted 705 - G4AllITManager & G4ITManager deleted
1258 - G4ITFinder added 706 - G4ITFinder added
1259 - G4VITTrackHolder added 707 - G4VITTrackHolder added
1260 - G4ITTrackHolder implemented 708 - G4ITTrackHolder implemented
1261 - code cleaned + useless classes removed 709 - code cleaned + useless classes removed
1262 710
1263 24-10-2014 MK, tag emdna-V10-00-40 711 24-10-2014 MK, tag emdna-V10-00-40
1264 - G4ITStepManager: remove verbose at closure 712 - G4ITStepManager: remove verbose at closure time
1265 713
1266 21-10-2014 MK, tag emdna-V10-00-39 714 21-10-2014 MK, tag emdna-V10-00-39
1267 - try to solve crash at closure time 715 - try to solve crash at closure time
1268 716
1269 21-10-2014 MK, tag emdna-V10-00-38 717 21-10-2014 MK, tag emdna-V10-00-38
1270 - remove G4MolecularConfiguration from the ma 718 - remove G4MolecularConfiguration from the manager's
1271 table when deleted 719 table when deleted
1272 - update disclaimer 720 - update disclaimer
1273 721
1274 17-10-2014 MK, tag emdna-V10-00-37 722 17-10-2014 MK, tag emdna-V10-00-37
1275 - clean code 723 - clean code
1276 - G4ITStepManager: one can ask why simulation 724 - G4ITStepManager: one can ask why simulation stops
1277 - remove useless verbose 725 - remove useless verbose
1278 726
1279 17-10-2014 MK, tag emdna-V10-00-36 727 17-10-2014 MK, tag emdna-V10-00-36
1280 - Call G4ITTimeStepper in ChemMan::InitMaster 728 - Call G4ITTimeStepper in ChemMan::InitMaster
1281 - Remove inappropriate method in G4ITTrackHol 729 - Remove inappropriate method in G4ITTrackHolder
1282 - G4DNASecondOrderReaction uses G4ITTimeStepp 730 - G4DNASecondOrderReaction uses G4ITTimeStepper::GetTimeStep
1283 731
1284 10-10-2014 MK, tag emdna-V10-00-35 732 10-10-2014 MK, tag emdna-V10-00-35
1285 Avoid use of std::map at the applicatio 733 Avoid use of std::map at the application level in TimeStepAction
1286 734
1287 07-10-2014 MK, tag emdna-V10-00-34 735 07-10-2014 MK, tag emdna-V10-00-34
1288 G4MolecularReactionTable : translate fr 736 G4MolecularReactionTable : translate from french to english
1289 G4DNAChemistryManager : remove usage of 737 G4DNAChemistryManager : remove usage of G4ITStepManager
1290 G4ITTimeStepper : use temporally as int 738 G4ITTimeStepper : use temporally as interface to G4ITStepManager
1291 739
1292 07-10-2014 MK, tag emdna-V10-00-33 740 07-10-2014 MK, tag emdna-V10-00-33
1293 Initialize G4ITStepManager in G4DNAChem 741 Initialize G4ITStepManager in G4DNAChemistryManager
1294 742
1295 17-09-2014 MK, tag emdna-V10-00-32 743 17-09-2014 MK, tag emdna-V10-00-32
1296 Add G4ITStepManager + messenger 744 Add G4ITStepManager + messenger
1297 Tag before architecture change 745 Tag before architecture change
1298 746
1299 12-07-2014 SI, tag emdna-V10-00-31 747 12-07-2014 SI, tag emdna-V10-00-31
1300 Removed obsolete class for electr 748 Removed obsolete class for electron excitation
1301 749
1302 27-06-2014 GCosmo, tag emdna-V10-00-30 750 27-06-2014 GCosmo, tag emdna-V10-00-30
1303 - Get rid of obsolete 'register' keywor 751 - Get rid of obsolete 'register' keyword in code.
1304 752
1305 05-06-2014 SI, tag emdna-V10-00-29 753 05-06-2014 SI, tag emdna-V10-00-29
1306 - added include of <deque> in G4DNAMill 754 - added include of <deque> in G4DNAMillerGreenExcitationModel.hh
1307 - updated G4DNAIonisation and G4D << 755 - updated G4DNAIonisation and G4DNARuddIonisationExtendModel for
1308 G4GenericIon usage 756 G4GenericIon usage
1309 - requires G4EMLOW6.39 757 - requires G4EMLOW6.39
1310 758
1311 04-06-2014 MK, tag emdna-V10-00-28 759 04-06-2014 MK, tag emdna-V10-00-28
1312 Remove directory management/include/imp 760 Remove directory management/include/impl
1313 Prepare for release 761 Prepare for release
1314 762
1315 04-06-2014 MK, tag emdna-V10-00-27 763 04-06-2014 MK, tag emdna-V10-00-27
1316 Resolve several defects pointed o 764 Resolve several defects pointed out by coverity
1317 Add interface G4ITTimeStepper 765 Add interface G4ITTimeStepper
1318 Avoid usage of molecule iterators 766 Avoid usage of molecule iterators as pointers
1319 767
1320 03-06-2014 SI, tag emdna-V10-00-26 768 03-06-2014 SI, tag emdna-V10-00-26
1321 Switched to DNAion for Si in 769 Switched to DNAion for Si in G4DNAGenericIonsManager
1322 770
1323 28-05-2014 VI, SI tag emdna-V10-00-25 771 28-05-2014 VI, SI tag emdna-V10-00-25
1324 Added G4DNABornAngle and G4DN 772 Added G4DNABornAngle and G4DNARuddAngle generators;
1325 Ionisation models switch to u 773 Ionisation models switch to use angular generator
1326 interface 774 interface
1327 775
1328 12.05.2014 MK, tag emdna-V10-00-24 776 12.05.2014 MK, tag emdna-V10-00-24
1329 Try to remove warnings 4 777 Try to remove warnings 4
1330 778
1331 12.05.2014 MK, tag emdna-V10-00-23 779 12.05.2014 MK, tag emdna-V10-00-23
1332 Try to remove warnings 3 780 Try to remove warnings 3
1333 781
1334 12.05.2014 MK, tag emdna-V10-00-22 782 12.05.2014 MK, tag emdna-V10-00-22
1335 Try to remove warnings 2 783 Try to remove warnings 2
1336 784
1337 12.05.2014 MK, tag emdna-V10-00-21 785 12.05.2014 MK, tag emdna-V10-00-21
1338 Try to remove warnings 786 Try to remove warnings
1339 787
1340 09.05.2014 S. Incerti, tag emdna-V10-00-20 788 09.05.2014 S. Incerti, tag emdna-V10-00-20
1341 Added Si to G4DNARuddIonisationEx << 789 Added Si to G4DNARuddIonisationExtendedModel
1342 on behalf of Z. Francis 790 on behalf of Z. Francis
1343 G4EMLOW6.38 needed 791 G4EMLOW6.38 needed
1344 792
1345 07-04-2014 SI tag emdna-V10-00-19 793 07-04-2014 SI tag emdna-V10-00-19
1346 Changed faster method interpolation in 794 Changed faster method interpolation in
1347 G4DNABornIonisationModel << 795 G4DNABornIonisationModel
1348 796
1349 04-04-2014 G.Cosmo tag emdna-V10-00-1 797 04-04-2014 G.Cosmo tag emdna-V10-00-18
1350 Removed problematic #define in G4TrackS 798 Removed problematic #define in G4TrackState.hh causing errors on
1351 Windows for overriding of system keywor 799 Windows for overriding of system keyword 'Handle'...
1352 Corrected order of inclusion of some he 800 Corrected order of inclusion of some headers and use of <>/"".
1353 801
1354 04-04-2014 MK tag emdna-V10-00-17 802 04-04-2014 MK tag emdna-V10-00-17
1355 Try to solve warnings when G4VERBOSE is 803 Try to solve warnings when G4VERBOSE is off
1356 804
1357 02-04-2014 MK tag emdna-V10 805 02-04-2014 MK tag emdna-V10-00-16
1358 G4ITSafetyHelper: Force usage of G4Path 806 G4ITSafetyHelper: Force usage of G4PathFinder for now
1359 807
1360 02-04-2014 MK tag emdna-V10 808 02-04-2014 MK tag emdna-V10-00-15
1361 Add preprocessor flags on files in dev 809 Add preprocessor flags on files in dev to prevent build errors with gmake
1362 810
1363 02-04-2014 MK tag emdna-V10 811 02-04-2014 MK tag emdna-V10-00-14
1364 - on mac: template parameter declared a 812 - on mac: template parameter declared as a friend class is supported only with c++11 which causes a warning
1365 -> this part is withdrawn for now 813 -> this part is withdrawn for now
1366 814
1367 02-04-2014 MK tag emdna-V10 815 02-04-2014 MK tag emdna-V10-00-13
1368 - version 2 : try fixing the build erro 816 - version 2 : try fixing the build error on mac
1369 817
1370 02-04-2014 MK tag emdna-V10 818 02-04-2014 MK tag emdna-V10-00-12
1371 - version 1 : try to fix build errors a 819 - version 1 : try to fix build errors and warnings on mac
1372 820
1373 02-04-2014 MK tag emdna-V10 821 02-04-2014 MK tag emdna-V10-00-11
1374 - try to fix build error on windows pla 822 - try to fix build error on windows platform - 3
1375 (G4MemStat & G4MolecularConfiguration) 823 (G4MemStat & G4MolecularConfiguration)
1376 824
1377 02-04-2014 MK tag emdna-V10 825 02-04-2014 MK tag emdna-V10-00-10
1378 - try to fix build error on windows pla 826 - try to fix build error on windows platform - 2
1379 (problem coming from having as a friend 827 (problem coming from having as a friend class a template argument)
1380 828
1381 02-04-2014 MK tag emdna-V10 829 02-04-2014 MK tag emdna-V10-00-09
1382 - try to fix build error on windows pla << 830 - try to fix build error on windows platform
1383 831
1384 01-04-2014 MK tag emdna-V10 832 01-04-2014 MK tag emdna-V10-00-08
1385 - G4DNAChemistryManager.cc: remove a G4 833 - G4DNAChemistryManager.cc: remove a G4cout in destructor causing a crash in test60
1386 - G4TrackState.hh: change 'typename' to 834 - G4TrackState.hh: change 'typename' to 'class' in template argument of typewrapper
1387 835
1388 01-04-2014 MK tag emdna-V10 836 01-04-2014 MK tag emdna-V10-00-07
1389 - reset CMakeLists.txt 837 - reset CMakeLists.txt
1390 838
1391 01-04-2014 MK tag emdna-V10 839 01-04-2014 MK tag emdna-V10-00-06
1392 - update chemistry 840 - update chemistry
1393 841
1394 01-04-2014 SI tag emdna-V10-00-05 842 01-04-2014 SI tag emdna-V10-00-05
1395 - Modified calculation of secondary kin 843 - Modified calculation of secondary kinetic for fast code
1396 844
1397 27-03-2014 G.Cosmo tag emdna-V10-00-04 845 27-03-2014 G.Cosmo tag emdna-V10-00-04
1398 - Corrected inclusion order of headers 846 - Corrected inclusion order of headers and forward declations
1399 in G4MolecularConfiguration. 847 in G4MolecularConfiguration.
1400 - Corrected typo in DLL import flag in 848 - Corrected typo in DLL import flag in G4DNAWaterDissociationDisplacer.hh.
1401 849
1402 25-03-2014 VS, SI tag emdna-V10-00-03 850 25-03-2014 VS, SI tag emdna-V10-00-03
1403 - Added several clear() to vectors for 851 - Added several clear() to vectors for MT
1404 852
1405 17-03-2014 SI tag emdna-V10-00-02 853 17-03-2014 SI tag emdna-V10-00-02
1406 - Modified G4DNAChampionElasticModel.cc << 854 - Modified G4DNAChampionElasticModel.cc to read
1407 high precision diff. cumulated 855 high precision diff. cumulated cross section
1408 to be used with G4EMLOW6.36 856 to be used with G4EMLOW6.36
1409 857
1410 12-12-2013 M.K tag emdna-V10-00-01 858 12-12-2013 M.K tag emdna-V10-00-01
1411 - G4DNAMolecularMaterial: Remove unused 859 - G4DNAMolecularMaterial: Remove unused variable
1412 860
1413 12-12-2013 M.K tag emdna-V10-00-00 861 12-12-2013 M.K tag emdna-V10-00-00
1414 - G4DNAMolecularMaterial is modified to << 862 - G4DNAMolecularMaterial is modified to prevent segmentation fault in case
1415 a model is not created at initialisatio 863 a model is not created at initialisation time
1416 864
1417 21-11-2013 V.I. tag emdna-V09-06-22 865 21-11-2013 V.I. tag emdna-V09-06-22
1418 - G4ITStepProcessor2 - removed ob 866 - G4ITStepProcessor2 - removed obsolete unused header
1419 867
1420 01-11-2013 M.K tag emdna-V09-06-21 868 01-11-2013 M.K tag emdna-V09-06-21
1421 - Correct incorrect singleton che 869 - Correct incorrect singleton check introduced in previous tag
1422 870
1423 01-11-2013 M.K tag emdna-V09-06-20 871 01-11-2013 M.K tag emdna-V09-06-20
1424 - Prepare for release bis 872 - Prepare for release bis
1425 873
1426 01-11-2013 M.K tag emdna-V09-06-19 874 01-11-2013 M.K tag emdna-V09-06-19
1427 - Prepare for release 875 - Prepare for release
1428 876
1429 10-10-2013 M.K. tag emdna-V09-06-18 877 10-10-2013 M.K. tag emdna-V09-06-18
1430 - Remove G4VERBOSE testing in G4D 878 - Remove G4VERBOSE testing in G4DNABrownianTransportation::BuildPhysicsTable
1431 879
1432 06-10-2013 M.K. tag emdna-V09-06-17 880 06-10-2013 M.K. tag emdna-V09-06-17
1433 - Same as before once again 881 - Same as before once again
1434 882
1435 03-10-2013 M.K. tag emdna-V09-06-16 883 03-10-2013 M.K. tag emdna-V09-06-16
1436 - Same as before 884 - Same as before
1437 885
1438 03-10-2013 M.K. tag emdna-V09-06-15 886 03-10-2013 M.K. tag emdna-V09-06-15
1439 - Improve MT compatibility 887 - Improve MT compatibility
1440 - Enhance G4DNAChemistryManager to be t << 888 - Enhance G4DNAChemistryManager to be the main interface used
1441 by the user - stage 1 889 by the user - stage 1
1442 890
1443 14-09-2013 M.Asai tag emdna-V09-06-14 891 14-09-2013 M.Asai tag emdna-V09-06-14
1444 G4VProcess::SubtractNumberOfInter 892 G4VProcess::SubtractNumberOfInteractionLengthLeft() is no longer
1445 a virtual methood since v9.6 and 893 a virtual methood since v9.6 and thus it must not be overwritten
1446 with virtual keyword in G4VITProc 894 with virtual keyword in G4VITProcess.
1447 895
1448 12-09-2013 M.K. tag emdna-V09-06-13 896 12-09-2013 M.K. tag emdna-V09-06-13
1449 Correction of an inadvertent modificati 897 Correction of an inadvertent modification introduced in previous tag
1450 898
1451 12-09-2013 M.K. tag emdna-V09-06-12 899 12-09-2013 M.K. tag emdna-V09-06-12
1452 Correct bound checks in G4ITManager.icc 900 Correct bound checks in G4ITManager.icc
1453 901
1454 16-08-2013 S.I. tag emdna-V09-06-11 902 16-08-2013 S.I. tag emdna-V09-06-11
1455 Adapted G4DNAGenericIonsManager to use 903 Adapted G4DNAGenericIonsManager to use of G4DNAIons
1456 904
1457 16-08-2013 S.I. tag emdna-V09-06-10 905 16-08-2013 S.I. tag emdna-V09-06-10
1458 Added G4DNAIons 906 Added G4DNAIons
1459 907
1460 25-06-2013 M.K. tag emdna-V09-06-09 908 25-06-2013 M.K. tag emdna-V09-06-09
1461 G4MoleculeID: Rectify initialization 909 G4MoleculeID: Rectify initialization
1462 G4MoleculeCounter: Automatic switch bet << 910 G4MoleculeCounter: Automatic switch between unique_ptr or
1463 auto_ptr according to c++ std version 911 auto_ptr according to c++ std version
1464 912
1465 11-06-2013 G.Cosmo tag emdna-V09-06- 913 11-06-2013 G.Cosmo tag emdna-V09-06-08
1466 Corrected static initialisation i 914 Corrected static initialisation in G4VMolecularDecayDisplacer
1467 for problem accidentally introduc 915 for problem accidentally introduced in previous tag.
1468 916
1469 11-06-2013 G.Cosmo tag emdna-V09-06- 917 11-06-2013 G.Cosmo tag emdna-V09-06-07
1470 Cleanup from automatic changes fo 918 Cleanup from automatic changes for MT in classes G4Molecule,
1471 G4VMolecularDecayDisplacer, G4IT, 919 G4VMolecularDecayDisplacer, G4IT, G4ITModelProcessor, G4VITProcess,
1472 G4ITTransportation, G4DNAChemistr 920 G4ITTransportation, G4DNAChemistryManager, and porting MT
1473 compilation on Windows. 921 compilation on Windows.
1474 922
1475 06-06-2013 S.I. tag emdna-V09-06- 923 06-06-2013 S.I. tag emdna-V09-06-06
1476 Updated G4DNABornIonisationModel 924 Updated G4DNABornIonisationModel for speedup option
1477 Requires G4EMLOW version 6.33 925 Requires G4EMLOW version 6.33
1478 926
1479 25-05-2013 M.K. tag emdna-V09-06- 927 25-05-2013 M.K. tag emdna-V09-06-05
1480 *Fix warning compilation in G4KDM 928 *Fix warning compilation in G4KDMap for specific gcc version
1481 929
1482 24-05-2013 M.K. tag emdna-V09-06- 930 24-05-2013 M.K. tag emdna-V09-06-04
1483 * Track state class updated to fi << 931 * Track state class updated to fix compilation errors on mac
1484 but still not in usage 932 but still not in usage
1485 933
1486 23-05-2013 M.K. tag emdna-V09-06- 934 23-05-2013 M.K. tag emdna-V09-06-03
1487 * G4KDMap : try fix error on std: 935 * G4KDMap : try fix error on std:ceil call on windows
1488 936
1489 23-V09-06-03-05-2013 M.K. tag emd 937 23-V09-06-03-05-2013 M.K. tag emdna-V09-06-02
1490 * G4KDMap : used deque::iterator 938 * G4KDMap : used deque::iterator
1491 939
1492 940
1493 22-05-2013 M.K. tag emdna-V09-06- 941 22-05-2013 M.K. tag emdna-V09-06-01
1494 * Correct warning from G4KDTree.cc 942 * Correct warning from G4KDTree.cc
1495 * G4KDMap : pop out elements from map 943 * G4KDMap : pop out elements from map
1496 944
1497 22-05-2013 M.K. tag emdna-V09-06-00 945 22-05-2013 M.K. tag emdna-V09-06-00
1498 * !!! MT !!!! Promoted to thread-global << 946 * !!! MT !!!! Promoted to thread-global storage :
1499 --> G4DNAGenericIonManager << 947 --> G4DNAGenericIonManager
1500 --> G4DNAMolecularMaterial 948 --> G4DNAMolecularMaterial
1501 --> G4DNAMolecularReactionTable 949 --> G4DNAMolecularReactionTable
1502 * G4KDMap added 950 * G4KDMap added
1503 * G4DNASmoluchowskiReactionModel : exce 951 * G4DNASmoluchowskiReactionModel : exception description enhanced
1504 * G4ITTrackingInteractivity : "Initiali << 952 * G4ITTrackingInteractivity : "Initialize()" method added for simplify
1505 initialization of daughter classes << 953 intialization of daughter classes
1506 * G4DNAChemistryManager : AddEmptyLineI << 954 * G4DNAChemistryManager : AddEmptyLineInOuputFile method added
1507 955
1508 12-11-2012 M.K tag emdna-V09-05- 956 12-11-2012 M.K tag emdna-V09-05-35
1509 Remove unnecessary abort() and ex 957 Remove unnecessary abort() and exit(-1) previously introduced to avoid
1510 coverity warnings (rev 64993) 958 coverity warnings (rev 64993)
1511 959
1512 06-11-2012 G.Cosmo tag emdna-V09 960 06-11-2012 G.Cosmo tag emdna-V09-05-34
1513 Minor fixes for porting on AIX; m 961 Minor fixes for porting on AIX; mainly on use of const signature
1514 for objects in maps... 962 for objects in maps...
1515 963
1516 04-11-2012 M.K. tag emdna-V09-05-33 964 04-11-2012 M.K. tag emdna-V09-05-33
1517 G4IT : transform G4ITTrackingInfo 965 G4IT : transform G4ITTrackingInformation pointer to object (rev 64715)
1518 G4ITTrackingManager : get rid of 966 G4ITTrackingManager : get rid of attribute "fVerboseLevel" (rev 64716)
1519 G4ITStepProcessor.cc : correct co 967 G4ITStepProcessor.cc : correct coverity warnings in copy constructor (not used) (rev 64717)
1520 G4ITTransportationManager.hh : pu 968 G4ITTransportationManager.hh : put default constructor as private (rev 64718)
1521 G4VITModel.cc : rename variables 969 G4VITModel.cc : rename variables in copy constructor and assignment operator (------)
1522 G4MolecularDecayChannel.cc : adap 970 G4MolecularDecayChannel.cc : adapt copy constructor to avoid coverity warnings (rev 64719)
1523 G4MoleculeCounter.cc : get rid of 971 G4MoleculeCounter.cc : get rid of duplicated layout (------)
1524 G4DNAMolecularStepByStepModel : a 972 G4DNAMolecularStepByStepModel : add an exception in the assignment operator (rev 64720)
1525 G4ITTrackingManager.hh : remove r 973 G4ITTrackingManager.hh : remove remainders of fVerboseLevel (rev 64722)
1526 Ionisation Models (Born, Rudd, Ru 974 Ionisation Models (Born, Rudd, RuddExtended) :
1527 set fAtomDeexcitation = 0 (re 975 set fAtomDeexcitation = 0 (rev 64723)
1528 add "else" before "if" statem 976 add "else" before "if" statements and
1529 add variables to avoid ma 977 add variables to avoid many checks on particleDefinition. (rev 64724)
1530 dna.files : update files (rev 647 978 dna.files : update files (rev 64725)
1531 979
1532 03-11-2012 S.I. tag emdna-V09-05-32 980 03-11-2012 S.I. tag emdna-V09-05-32
1533 Switched to usage of SetEmModel a 981 Switched to usage of SetEmModel and EmModel in all dna/processes
1534 classes 982 classes
1535 983
1536 24-10-2012 M.K tag emdna-V09 984 24-10-2012 M.K tag emdna-V09-05-31
1537 G4ITNavigator is updated to new i 985 G4ITNavigator is updated to new interface of ReplicaNavigation::ComputeStep
1538 (previously commented) 986 (previously commented)
1539 987
1540 23-10-2012 M.K tag emdna-V09 988 23-10-2012 M.K tag emdna-V09-05-30
1541 Add exception in G4DNASecondOrder 989 Add exception in G4DNASecondOrderReaction
1542 Add carriage return in G4DNASmolu 990 Add carriage return in G4DNASmoluchowskiReaction cc and hh
1543 991
1544 18-10-2012 M.K tag emdna-V09 992 18-10-2012 M.K tag emdna-V09-05-29
1545 Previous tag did not include hist 993 Previous tag did not include history changes
1546 994
1547 18-10-2012 M.K tag emdna-V09 995 18-10-2012 M.K tag emdna-V09-05-28
1548 Remove warning 996 Remove warning
1549 997
1550 17-10-2012 M.K tag emdna-V09 998 17-10-2012 M.K tag emdna-V09-05-27
1551 Correct a typo from previous tag 999 Correct a typo from previous tag
1552 1000
1553 17-10-2012 M.K tag emdna-V09 1001 17-10-2012 M.K tag emdna-V09-05-26
1554 Correct information in headers 1002 Correct information in headers
1555 Rename G4DNADiffustionControlledM 1003 Rename G4DNADiffustionControlledModel to G4DNASmoluchowskiReactionModel
1556 G4ITNavigator updated to new inte 1004 G4ITNavigator updated to new interface of ReplicaNavigation::ComputeStep.
1557 1005
1558 01-10-2012 SI, P.Pater tag emdna-V09 1006 01-10-2012 SI, P.Pater tag emdna-V09-05-25
1559 Force kinetic energy to zero for 1007 Force kinetic energy to zero for real killings in models.
1560 1008
1561 12-07-2012 G.Cosmo tag emdna-V09 1009 12-07-2012 G.Cosmo tag emdna-V09-05-24
1562 Explicitly use inclusion of heade 1010 Explicitly use inclusion of headers for system of units and physical
1563 constants, in plan to remove impl 1011 constants, in plan to remove implicit inclusion from globals.hh.
1564 1012
1565 11.07.2012 M.K tag emdna-V09 1013 11.07.2012 M.K tag emdna-V09-05-23
1566 Correct warnings introduce in previous 1014 Correct warnings introduce in previous tag
1567 1015
1568 11.07.2012 M.K tag emdna-V09 1016 11.07.2012 M.K tag emdna-V09-05-22
1569 Tag to be proposed 1017 Tag to be proposed
1570 1018
1571 25.06.2012 M.K tag emdna-V09-05-21 1019 25.06.2012 M.K tag emdna-V09-05-21
1572 Fix semantic warning related to f 1020 Fix semantic warning related to forward declaration of G4ITNavigator_Lock
1573 Modify molecule's name 1021 Modify molecule's name
1574 << 1022
1575 21.06.2012 S.I tag emdna-V09-05-20 1023 21.06.2012 S.I tag emdna-V09-05-20
1576 Update of electron elastic scatte << 1024 Update of electron elastic scattering low limit
1577 1025
1578 09.06.2012 M.K tag emdna-V09-05-19 1026 09.06.2012 M.K tag emdna-V09-05-19
1579 Fixed shadowing 1027 Fixed shadowing
1580 1028
1581 04.06.2012 M.K tag emdna-V09-05-18 1029 04.06.2012 M.K tag emdna-V09-05-18
1582 Add G4ITTrackingInteractivity + c 1030 Add G4ITTrackingInteractivity + correct coverity warnings
1583 1031
1584 24.05.2012 M.K tag emdna-V09-05-17 1032 24.05.2012 M.K tag emdna-V09-05-17
1585 Remove unnecessary call of pow in 1033 Remove unnecessary call of pow in G4DNASecondOrderReaction
1586 1034
1587 23.05.2012 M.K tag emdna-V09-05-16 1035 23.05.2012 M.K tag emdna-V09-05-16
1588 Add initialisation of G4ITTrackHo 1036 Add initialisation of G4ITTrackHolder in copy constructor of
1589 G4ITStepManager 1037 G4ITStepManager
1590 Prevent call of destructor of G4I 1038 Prevent call of destructor of G4ITStepManager and
1591 G4DNAChemistryManager 1039 G4DNAChemistryManager
1592 1040
1593 23.05.2012 M.K tag emdna-V09-05-15 1041 23.05.2012 M.K tag emdna-V09-05-15
1594 Display warning (only once) from 1042 Display warning (only once) from G4DNAMolecularMaterial
1595 when one of its methods is called 1043 when one of its methods is called using a material that is
1596 not defined as a molecule 1044 not defined as a molecule
1597 1045
1598 21.05.2012 M.K tag emdna-V09-05-14 1046 21.05.2012 M.K tag emdna-V09-05-14
1599 Modify G4DNAMolecularMaterial 1047 Modify G4DNAMolecularMaterial
1600 Modify G4DNADamages 1048 Modify G4DNADamages
1601 Add G4DNASecondOrderReaction prot 1049 Add G4DNASecondOrderReaction prototype
1602 Modify all models to use G4DNAMol 1050 Modify all models to use G4DNAMolecularMaterial
1603 1051
1604 14.05.2012 M.K tag emdna-V09-05-13 1052 14.05.2012 M.K tag emdna-V09-05-13
1605 Add G4DNAMolecularMaterial 1053 Add G4DNAMolecularMaterial
1606 Add G4DNADamages 1054 Add G4DNADamages
1607 1055
1608 10.05.2012 M.K tag emdna-V09-05-12 1056 10.05.2012 M.K tag emdna-V09-05-12
1609 Add the possibility of calling G4 1057 Add the possibility of calling G4ITStepManager::EndTracking()
1610 from UserReactionAction::EndProce 1058 from UserReactionAction::EndProcessing()
1611 1059
1612 08.05.2012 M.K tag emdna-V09-05-11 1060 08.05.2012 M.K tag emdna-V09-05-11
1613 Use inverseErf from CLHEP 1061 Use inverseErf from CLHEP
1614 1062
1615 03.05.2012 M.K tag emdna-V09-05-10 1063 03.05.2012 M.K tag emdna-V09-05-10
1616 Add erfc function for windows com 1064 Add erfc function for windows compilator (VC++)
1617 1065
1618 03.05.2012 M.K tag emdna-V09-05-09 1066 03.05.2012 M.K tag emdna-V09-05-09
1619 Add an exception in molecular dec 1067 Add an exception in molecular decay, in case no decay channel was proposed in input
1620 1068
1621 03.05.2012 M.K tag emdna-V09-05-08 1069 03.05.2012 M.K tag emdna-V09-05-08
1622 Add products of dissociative atta 1070 Add products of dissociative attachments (as a molecular decay)
1623 Add new methods in G4ChemistryMan 1071 Add new methods in G4ChemistryManager :
1624 - PushMolecule 1072 - PushMolecule
1625 - PushMoleculeAtParentTimeAndPlac 1073 - PushMoleculeAtParentTimeAndPlace
1626 Reset() at the end of G4ITStepMan 1074 Reset() at the end of G4ITStepManager::Process()
1627 1075
1628 30.03.2012 M.K tag emdna-V09-05-07 1076 30.03.2012 M.K tag emdna-V09-05-07
1629 Same as emdna-V09-05-06 1077 Same as emdna-V09-05-06
1630 1078
1631 30.03.2012 M.K tag emdna-V09-05-06 1079 30.03.2012 M.K tag emdna-V09-05-06
1632 1) Add separate navigator for syn 1080 1) Add separate navigator for synchronous tracking
1633 New classes : 1081 New classes :
1634 * G4ITTransportationManager 1082 * G4ITTransportationManager
1635 * G4ITNavigator (just a small cha 1083 * G4ITNavigator (just a small change from G4Navigator)
1636 2) A messenger for G4ITStepManage 1084 2) A messenger for G4ITStepManager :
1637 * G4ITSteppingMessenger 1085 * G4ITSteppingMessenger
1638 3) Solve bugs with normal and bro 1086 3) Solve bugs with normal and brownian ITTransportation
1639 1087
1640 14.03.2012 M.K tag emdna-V09-05-05 1088 14.03.2012 M.K tag emdna-V09-05-05
1641 * int G4VITProcess::fProcessID 1089 * int G4VITProcess::fProcessID
1642 int G4VITProcess::fNbProcess 1090 int G4VITProcess::fNbProcess
1643 -> become size_t + related change 1091 -> become size_t + related changes
1644 * when a poststep process propo 1092 * when a poststep process proposes an IL < 0
1645 => considered as a time, and tran 1093 => considered as a time, and transportation::computestep
1646 is used 1094 is used
1647 1095
1648 14.03.2012 M.K tag emdna-V09-05-04 1096 14.03.2012 M.K tag emdna-V09-05-04
1649 Fix compilation warning 1097 Fix compilation warning
1650 1098
1651 14.03.2012 M.K tag emdna-V09-05-03 1099 14.03.2012 M.K tag emdna-V09-05-03
1652 Improve the management of information i 1100 Improve the management of information in G4ITStepProcessor
1653 Fix coverity warnings 1101 Fix coverity warnings
1654 1102
1655 18.01.2012 S.I. tag emdna-V09 1103 18.01.2012 S.I. tag emdna-V09-05-02
1656 Removal of G4Water* classes in ut 1104 Removal of G4Water* classes in utils
1657 1105
1658 11.01.2012 M.K tag emdna-V09 1106 11.01.2012 M.K tag emdna-V09-05-01
1659 Bug fix in G4DNAChemistryManager: 1107 Bug fix in G4DNAChemistryManager::CreateSolvatedElectron
1660 concerning the final position of 1108 concerning the final position of the solvated electron
1661 using Sanche thermalization 1109 using Sanche thermalization
1662 1110
1663 16.12.2011 S.I tag emdna-V09 1111 16.12.2011 S.I tag emdna-V09-05-00
1664 Updated source of cross section f 1112 Updated source of cross section file for elastic scattering
1665 1113
1666 25.11.2011 M.K tag emdna-V09 1114 25.11.2011 M.K tag emdna-V09-04-52
1667 Correct a typo in previous tag 1115 Correct a typo in previous tag
1668 1116
1669 25.11.2011 M.K tag emdna-V09 1117 25.11.2011 M.K tag emdna-V09-04-51
1670 Place the reaction products at th 1118 Place the reaction products at the reaction site
1671 rather than center of mass in DNA 1119 rather than center of mass in DNAMolecularReaction
1672 1120
1673 21.11.2011 M.K tag emdna-V09 1121 21.11.2011 M.K tag emdna-V09-04-50
1674 Change the name of macros in AddC 1122 Change the name of macros in AddClone_def.hh to
1675 avoid conflicts with ROOT. 1123 avoid conflicts with ROOT.
1676 Add short class description (comm 1124 Add short class description (comments added in the new files)
1677 in JavaDoc style for doxygen use. 1125 in JavaDoc style for doxygen use.
1678 1126
1679 21.11.2011 M.K tag emdna-V09 1127 21.11.2011 M.K tag emdna-V09-04-49
1680 Correct a wrong condition in the 1128 Correct a wrong condition in the step manager
1681 Avoid the call of Green brownian 1129 Avoid the call of Green brownian bridge when
1682 the time step is equal to zero (b 1130 the time step is equal to zero (bug)
1683 Give priority to G4Processes over 1131 Give priority to G4Processes over reaction processes
1684 when the time steps returned by t 1132 when the time steps returned by the time stepper
1685 and the processes are equal 1133 and the processes are equal
1686 Improve verbose 1134 Improve verbose
1687 1135
1688 21.11.2011 M.K tag emdna-V09 1136 21.11.2011 M.K tag emdna-V09-04-48
1689 Fix incoherent management of time 1137 Fix incoherent management of time and secondaries in management/
1690 Avoid memory leak related to the 1138 Avoid memory leak related to the management of ITs
1691 Correct verbose in new models & p 1139 Correct verbose in new models & process
1692 1140
1693 18.11.2011 M.K tag emdna-V09 1141 18.11.2011 M.K tag emdna-V09-04-47
1694 Fix uninitialized boolean variabl << 1142 Fix uninitialized boolean variable (fWriteFile)
1695 in G4DNAChemistryManager 1143 in G4DNAChemistryManager
1696 1144
1697 18.11.2011 M.K tag emdna-V09 1145 18.11.2011 M.K tag emdna-V09-04-46
1698 Fix compilation error in G4TrackL 1146 Fix compilation error in G4TrackList on macOs
1699 Clean G4DNAMolecularDecayDisplace 1147 Clean G4DNAMolecularDecayDisplacer from comments
1700 Correct a typo in G4DNAChemistryM 1148 Correct a typo in G4DNAChemistryManager (H20 -> H2O)
1701 1149
1702 15.11.2011 G.Cosmo tag emdna-V09 1150 15.11.2011 G.Cosmo tag emdna-V09-04-45
1703 Fixes to initialisation of static 1151 Fixes to initialisation of static data in G4VMolecularDecayDisplacer
1704 and G4DNAMolecularDecayDisplacer, 1152 and G4DNAMolecularDecayDisplacer, to allow generation of DLLs on
1705 Windows. 1153 Windows.
1706 Fixed compilation warning on icc 1154 Fixed compilation warning on icc compiler in
1707 G4MolecularDecayTable.cc 1155 G4MolecularDecayTable.cc
1708 1156
1709 10.11.2011 M.K. tag emdna-V09 1157 10.11.2011 M.K. tag emdna-V09-04-44
1710 Fix a bug in G4DNATransformElectr 1158 Fix a bug in G4DNATransformElectronModel
1711 1159
1712 10.11.2011 M.K. tag emdna-V09 1160 10.11.2011 M.K. tag emdna-V09-04-43
1713 Clean classes for release 1161 Clean classes for release
1714 Add comment into source 1162 Add comment into source
1715 Change name of some methods 1163 Change name of some methods
1716 Transform two independent singlet 1164 Transform two independent singleton pointers to auto_ptr
1717 in order to prevent the user from 1165 in order to prevent the user from deleting those classes
1718 (ITStepMan + DNAChemMan) 1166 (ITStepMan + DNAChemMan)
1719 1167
1720 10.11.2011 M.K. tag emdna-V09 1168 10.11.2011 M.K. tag emdna-V09-04-42
1721 For safety (at the time of static 1169 For safety (at the time of static members destruction)
1722 change fgManager in MolConf into 1170 change fgManager in MolConf into a pointer delete by
1723 the chemistryManager. 1171 the chemistryManager.
1724 1172
1725 09.11.2011 M.K. tag emdna-V09 1173 09.11.2011 M.K. tag emdna-V09-04-41
1726 Add friend class G4TrackList_Boun 1174 Add friend class G4TrackList_Boundary;
1727 in G4TrackListNode. 1175 in G4TrackListNode.
1728 Simplify and improve the use of d 1176 Simplify and improve the use of dnaChemMan
1729 Add more convenient methods in us 1177 Add more convenient methods in userReactionAction
1730 1178
1731 08.11.2011 M.K. tag emdna-V09 1179 08.11.2011 M.K. tag emdna-V09-04-40
1732 Fix coverity warnings 1180 Fix coverity warnings
1733 1181
1734 07.11.2011 M.K. tag emdna-V09 1182 07.11.2011 M.K. tag emdna-V09-04-39
1735 Add correct types/sub-types for D 1183 Add correct types/sub-types for DNAElectronSolvatation
1736 DNAMolecularDecay, DNABrownianTra 1184 DNAMolecularDecay, DNABrownianTransportation, ITTransp
1737 Add the possibility to link a dec 1185 Add the possibility to link a decay time to a given
1738 electronic configuration while de 1186 electronic configuration while declaring the decay
1739 scheme through : G4MoleculeDef::A 1187 scheme through : G4MoleculeDef::AddeConfToExcitedState
1740 Clean classes for release 1188 Clean classes for release
1741 1189
1742 03.11.2011 M.K. tag emdna-V09 1190 03.11.2011 M.K. tag emdna-V09-04-38
1743 Add dna libs in sources.cmake 1191 Add dna libs in sources.cmake
1744 1192
1745 03.11.2011 M.K. tag emdna-V09 1193 03.11.2011 M.K. tag emdna-V09-04-37
1746 Add G4ITStepManager fVerbose 1194 Add G4ITStepManager fVerbose
1747 Add dna includes in sources.cmake 1195 Add dna includes in sources.cmake
1748 << 1196
1749 01.11.2011 M.K. tag emdna-V09 1197 01.11.2011 M.K. tag emdna-V09-04-36
1750 Remove warnings on G4ITModelProce 1198 Remove warnings on G4ITModelProcessor,
1751 G4ITTransportation, G4TrackList o 1199 G4ITTransportation, G4TrackList on Windows
1752 1200
1753 01.11.2011 G.Cosmo 1201 01.11.2011 G.Cosmo
1754 Renamed export flags for DLL buil 1202 Renamed export flags for DLL builds to G4EM_ALLOC_EXPORT and
1755 updated GNUMakefiles to have it p 1203 updated GNUMakefiles to have it properly defined.
1756 1204
1757 31.10.2011 M.K tag emdna-V09-04-35 1205 31.10.2011 M.K tag emdna-V09-04-35
1758 Remove obsolete G4Exception 1206 Remove obsolete G4Exception
1759 Remove "friend class G4KDTree" in G4KDN 1207 Remove "friend class G4KDTree" in G4KDNode
1760 Remove G4VITProcessor and all relatives << 1208 Remove G4VITProcessor and all relatives
1761 Fix windows compilation errors & warnin 1209 Fix windows compilation errors & warnings
1762 1210
1763 28.10.2011 M.K tag emdna-V09-04-34 1211 28.10.2011 M.K tag emdna-V09-04-34
1764 Remove __PRETTY_FUNCTION__ introd 1212 Remove __PRETTY_FUNCTION__ introduce __Exception_Origin__
1765 Plus remove obsolete G4Exception 1213 Plus remove obsolete G4Exception
1766 1214
1767 28.10.2011 M.K tag emdna-V09-04-33 1215 28.10.2011 M.K tag emdna-V09-04-33
1768 Displace G4DNAChemistryManager, G 1216 Displace G4DNAChemistryManager, G4DNAMolecularReactionTable,
1769 G4VDNAReactionModel to utils 1217 G4VDNAReactionModel to utils
1770 Displace G4DNAMoleculeEncouterSte 1218 Displace G4DNAMoleculeEncouterStepper, G4DNAMoleculeReaction
1771 to models 1219 to models
1772 1220
1773 27.10.2011 M.K tag emdna-V09-04-32 1221 27.10.2011 M.K tag emdna-V09-04-32
1774 Fix BornIonisation + the two RuddIoni 1222 Fix BornIonisation + the two RuddIoni
1775 coverity errors. 1223 coverity errors.
1776 1224
1777 26.10.2011 M.K tag emdna-V09-04-31 1225 26.10.2011 M.K tag emdna-V09-04-31
1778 change std::shared_ptr to CLHEP::shared << 1226 change std::shared_ptr to CLHEP::shared_ptr
1779 1227
1780 26.10.2011 M.K. tag emdna-V09-04-30 1228 26.10.2011 M.K. tag emdna-V09-04-30
1781 Memory leak fixes 1229 Memory leak fixes
1782 G4MolecularConfiguration::fManager adde 1230 G4MolecularConfiguration::fManager added
1783 1231
1784 26.10.2011 M.K. tag emdna-V09-04-29 1232 26.10.2011 M.K. tag emdna-V09-04-29
1785 G4DNAIonisation : add models for C/N/O/ 1233 G4DNAIonisation : add models for C/N/O/Fe
1786 Add electron solvatation process & mode 1234 Add electron solvatation process & models
1787 Add chemical processes 1235 Add chemical processes
1788 1236
1789 21.10.2011 M.K. tag emdna-V09-04-28 1237 21.10.2011 M.K. tag emdna-V09-04-28
1790 Same as emdna-V09-04-27 including model << 1238 Same as emdna-V09-04-27 including models/ & processes/ from
1791 emdna-V09-04-24 1239 emdna-V09-04-24
1792 << 1240
1793 21.10.2011 M.K. tag emdna-V09-04-27 1241 21.10.2011 M.K. tag emdna-V09-04-27
1794 CMake fixes from emdna-V09-04-24 1242 CMake fixes from emdna-V09-04-24
1795 << 1243
1796 21.10.2011 M.K. tag emdna-V09-04-26 1244 21.10.2011 M.K. tag emdna-V09-04-26
1797 Bug fixes and new dev from the previous << 1245 Bug fixes and new dev from the previous tag
1798 1246
1799 21.10.2011 S. Incerti tag emdna-V09-04-25 1247 21.10.2011 S. Incerti tag emdna-V09-04-25
1800 Extension of ionisation by HZE proposed 1248 Extension of ionisation by HZE proposed by Z. Francis
1801 1249
1802 20.10.2011 M.K. tag emdna-V09-04-24 1250 20.10.2011 M.K. tag emdna-V09-04-24
1803 Bug fixes and new dev from the previous 1251 Bug fixes and new dev from the previous tag
1804 << 1252
1805 07.10.2011 M.K. tag emdna-V09-04-23 1253 07.10.2011 M.K. tag emdna-V09-04-23
1806 First tag with "molecules" files << 1254 First tag with "molecules" files
1807 << 1255
1808 07.10.2011 M.K. tag emdna-V09-04-22 1256 07.10.2011 M.K. tag emdna-V09-04-22
1809 Add molecules+management directory 1257 Add molecules+management directory
1810 First tag with "management" files 1258 First tag with "management" files
1811 1259
1812 09.09.2011 G.Folger tag emdna-V09 1260 09.09.2011 G.Folger tag emdna-V09-04-21
1813 utils/sources.cmake: remove refer << 1261 utils/sources.cmake: remove reference to non-existant
1814 G4DNAMoleculeManager.cc << 1262 G4DNAMoleculeManager.cc
1815 1263
1816 05.09.2011 A. M. M. K., S. I., tag emdna-V09 1264 05.09.2011 A. M. M. K., S. I., tag emdna-V09-04-20
1817 Updated sources.make and CMakeLis 1265 Updated sources.make and CMakeLists.txt
1818 1266
1819 30.08.2011 A. M. M. K., S. I., tag emdna-V09 1267 30.08.2011 A. M. M. K., S. I., tag emdna-V09-04-19
1820 Reorganized whole architecture. 1268 Reorganized whole architecture.
1821 1269
1822 24.08.2011 A. Mantero, tag emdna-V09-04-18 1270 24.08.2011 A. Mantero, tag emdna-V09-04-18
1823 Fixed a bug regarding energy depo 1271 Fixed a bug regarding energy deposition (bindingEnergy=0
1824 if no deexcitation) 1272 if no deexcitation)
1825 1273
1826 22.08.2011 S. Incerti, tag emdna-V09-04-17 1274 22.08.2011 S. Incerti, tag emdna-V09-04-17
1827 Changed code (em0006) numbering f 1275 Changed code (em0006) numbering for G4Exception
1828 1276
1829 19.08.2011 S. Incerti, tag emdna-V09-04-16 1277 19.08.2011 S. Incerti, tag emdna-V09-04-16
1830 Switched to new G4Exception synta 1278 Switched to new G4Exception syntax
1831 1279
1832 04.08.2011 A. Mantero, tag emdna-V09-04-15 1280 04.08.2011 A. Mantero, tag emdna-V09-04-15
1833 Added enhanced debug information 1281 Added enhanced debug information in ionisation models
1834 1282
1835 02.08.2011 S. Incerti, tag emdna-V09-04-14 1283 02.08.2011 S. Incerti, tag emdna-V09-04-14
1836 Removed wrong pointer delete in G4DNARu 1284 Removed wrong pointer delete in G4DNARuddIonisation*
1837 1285
1838 28.07.2011 S. Incerti, tag emdna-V09-04-13 1286 28.07.2011 S. Incerti, tag emdna-V09-04-13
1839 Removed obsolete information. 1287 Removed obsolete information.
1840 1288
1841 28.07.2011 S. Incerti, tag emdna-V09-04-12 1289 28.07.2011 S. Incerti, tag emdna-V09-04-12
1842 Updated deexcitation initialization in 1290 Updated deexcitation initialization in ionization models.
1843 1291
1844 21.07.2011 A. Mantero, tag emdna-V09-04-11 1292 21.07.2011 A. Mantero, tag emdna-V09-04-11
1845 Coverity warnings removal 1293 Coverity warnings removal
1846 1294
1847 11.07.2011 S.Incerti, tag emdna-V09-04-10 1295 11.07.2011 S.Incerti, tag emdna-V09-04-10
1848 - Increased energy limits for 1296 - Increased energy limits for
1849 G4DNAChargeIncrease 1297 G4DNAChargeIncrease
1850 G4DNAChargeDecrease 1298 G4DNAChargeDecrease
1851 G4DNADingfelderChargeIncreaseModel 1299 G4DNADingfelderChargeIncreaseModel
1852 G4DNADingflederChargeDecreaseModel 1300 G4DNADingflederChargeDecreaseModel
1853 in collaboration with Ziad F. 1301 in collaboration with Ziad F.
1854 - This tag includes Alfonso's upgrade << 1302 - This tag includes Alfonso's upgrade
1855 of ionisation classes for Auger e- 1303 of ionisation classes for Auger e-
1856 1304
1857 16.05.2011 A.Mantero, tag emdna-V09-04-09 1305 16.05.2011 A.Mantero, tag emdna-V09-04-09
1858 Further compilation warnings removal 1306 Further compilation warnings removal
1859 1307
1860 16.05.2011 A.Mantero, tag emdna-V09-04-08 1308 16.05.2011 A.Mantero, tag emdna-V09-04-08
1861 Compilation warnings removal 1309 Compilation warnings removal
1862 1310
1863 12.05.2011 A.Mantero, tag emdna-V09-04-07 1311 12.05.2011 A.Mantero, tag emdna-V09-04-07
1864 added Atomic Deexcitation to Ionisation 1312 added Atomic Deexcitation to Ionisation Models
1865 1313
1866 04.05.2011 S. Incerti, tag emdna-V09-04-06 1314 04.05.2011 S. Incerti, tag emdna-V09-04-06
1867 Fixed compilation error on icc in 1315 Fixed compilation error on icc in
1868 G4DNADingfelderChargeIncreaseModel.cc. 1316 G4DNADingfelderChargeIncreaseModel.cc.
1869 1317
1870 03.05.2011 S. Incerti, tag emdna-V09-04-05 1318 03.05.2011 S. Incerti, tag emdna-V09-04-05
1871 Changed process sub-type numberin 1319 Changed process sub-type numbering.
1872 1320
1873 30.04.2011 S. Incerti, tag emdna-V09-04-04 1321 30.04.2011 S. Incerti, tag emdna-V09-04-04
1874 Fixed coverity warnings. 1322 Fixed coverity warnings.
1875 1323
1876 05.04.2011 S. Incerti, tag emdna-V09-04-03 1324 05.04.2011 S. Incerti, tag emdna-V09-04-03
1877 Updated all models for handling o 1325 Updated all models for handling of variable density.
1878 1326
1879 17.03.2011 S. Incerti, tag emdna-V09-04-02 1327 17.03.2011 S. Incerti, tag emdna-V09-04-02
1880 Addition of dependencies to confi 1328 Addition of dependencies to configuration files.
1881 1329
1882 17.03.2011 S. Incerti, tag emdna-V09-04-01 1330 17.03.2011 S. Incerti, tag emdna-V09-04-01
1883 Addition of all files. 1331 Addition of all files.
1884 1332
1885 13.02.2011 S. Incerti, tag emdna-V09-04-00 1333 13.02.2011 S. Incerti, tag emdna-V09-04-00
1886 Creation of dna sub-package in el 1334 Creation of dna sub-package in electromagnetic category.