| Geant4 Cross Reference |
1 # Category emdna History << 1 =========================================================
>> 2 Geant4 - an Object-Oriented Toolkit for Simulation in HEP
>> 3 =========================================================
>> 4
>> 5 Category History file
>> 6 ---------------------
>> 7 This file should be used by G4 developers and category coordinators
>> 8 to briefly summarize all major modifications introduced in the code
>> 9 and keep track of all category-tags.
>> 10 It DOES NOT substitute the CVS log-message one should put at every
>> 11 committal in the CVS repository !
>> 12
>> 13 ----------------------------------------------------------
>> 14 * Reverse chronological order (last date on top), please *
>> 15 ----------------------------------------------------------*
2 16
3 See `CONTRIBUTING.rst` for details of **requir << 17 09-02-2017, MK, tag emdna-V10-02-38
4 which **must** added in reverse chronological <<
5 It must **not** be used as a substitute for wr <<
6 <<
7 ---------------------------------------------- <<
8 <<
9 ## 2024-10-31 Hoang Tran (emdna-V11-02-17) <<
10 - missing value in DNA PTB Ionization Structur <<
11 - missing GetMaterial() in DNA PTB Excitation <<
12 <<
13 ## 2024-10-02 Hoang Tran (emdna-V11-02-16) <<
14 - Modified the molecule names of OH, HO2, O in <<
15 Each molecule configuration has a molecule d <<
16 <<
17 ## 2024-08-27 Gabriele Cosmo (emdna-V11-02-15) <<
18 - Fixed reported Coverity defects for use of s <<
19 and const iterators. <<
20 <<
21 ## 2024-08-20 Hoang Tran (emdna-V11-02-14) <<
22 - debug invalid a root node of KDTree <<
23 <<
24 ## 2024-08-08 Gabriele Cosmo (emdna-V11-02-13) <<
25 - Fixed reported Coverity defects in G4LEPTSEl <<
26 for explicit null dereferenced pointer and o <<
27 cleanup. <<
28 <<
29 ## 2024-05-23 Hoang Tran (emdna-V11-02-12) <<
30 - Delete enum unused due to te use of EmParame <<
31 to control chemistry models in G4EmDNAChemis <<
32 <<
33 ## 2024-05-11 Gabriele Cosmo (emdna-V11-02-11) <<
34 - Fixed compilation error on macOS/clang with <<
35 of std::function in G4OctreeFinder. <<
36 <<
37 ## 2024-05-06 Gabriele Cosmo (emdna-V11-02-10) <<
38 - Fixed compilation warning on macOS/XCode for <<
39 in G4DNADoubleIonisationModel and G4DNAMulti <<
40 <<
41 ## 2024-04-25 Hoang Tran (emdna-V11-02-09) <<
42 - Delete DelayLists at the end of chemistry st <<
43 - clean the G4Scheduler <<
44 <<
45 ## 2024-04-24 W.G.Shin (emdna-V11-02-08) <<
46 - G4DNAELSEPAElasticModel <<
47 - Modified to be compatible with density sca <<
48 <<
49 ## 2024-04-19 Gabriele Cosmo (emdna-V11-02-07) <<
50 - Fixed compilation error on Windows VC++ with <<
51 Added missing declarations for TG4MoleculeSh <<
52 Based on [GitHub PR#69](https://github.com/G <<
53 <<
54 ## 2024-04-18 Hoang Tran (emdna-V11-02-06) <<
55 - debug invalid KDTree node. <<
56 <<
57 ## 2024-04-15 Vladimir Ivanchenko (emdna-V11-0 <<
58 - G4GeneralIonIonisationModel, G4DNAIonChargeI <<
59 G4DNAIonChargeDecreaseModel - new classes im <<
60 ions heavier than Helium <<
61 - G4DNAChargeDecrease, G4DNAChargeIncrease - r <<
62 min/max model energy inside processes clas <<
63 - G4DNARuddIonisationExtendedModel - updated i <<
64 from the general model <<
65 - source.cmake in models sub-directory become <<
66 both .hh and .cc files <<
67 <<
68 ## 2024-04-10 Shogo Okada (emdna-V11-02-04) <<
69 - G4DNAElectronHoleRecombination <<
70 - Changed the branch condition in FindReacta <<
71 involved in electron-hole recombination <<
72 - G4DNAWaterDissociationDisplacer <<
73 - Added dissociative decay channels for mult <<
74 - G4DNAMultipleIonisationManager <<
75 - New class focusing on generation of multip <<
76 calculation of scale parameter to compute <<
77 multiple-ionization process <<
78 - G4DNADoubleIonisation <<
79 - G4DNATripleIonisation <<
80 - G4DNAQuadrupleIonisation <<
81 - New process classes for multiple-ionizatio <<
82 - G4DNADoubleIonisationModel <<
83 - G4DNATripleIonisationModel <<
84 - G4DNAQuadrupleIonisationModel <<
85 - New model classes related to multiple-ioni <<
86 <<
87 ## 2024-04-05 Vladimir Ivanchenko (emdna-V11-0 <<
88 - G4DNARuddIonisationExtendedModel - updated m <<
89 uppload data in the class constructor once <<
90 effective charge approach for all ions wit <<
91 correct computation of stopping power and <<
92 variables before sampling, optimized algor <<
93 becomes ~10 times faster), removed unused <<
94 <<
95 ## 2024-02-29 Hoang Tran (emdna-V11-02-02) <<
96 - correct verbose conditions for warning in IR <<
97 <<
98 ## 2024-02-24 Hoang Tran (emdna-V11-02-01) <<
99 - Optimize IRT-syn at 1 ps for high LET applic <<
100 <<
101 ## 2023-12-15 Vladimir Ivanchenko (emdna-V11-0 <<
102 - G4DNABornAngle - fixed numerical problem: ad <<
103 use relativistic formula for max energy tr <<
104 <<
105 ## 2023-11-14 Ben Morgan (emdna-V11-01-25) <<
106 - Use G4FindDataDir to access data libraries i <<
107 <<
108 ## 2023-11-11 Hoang Tran (emdna-V11-01-24) <<
109 - correct fastercode section for dna opt6 <<
110 <<
111 ## 2023-10-12 Hoang Tran (emdna-V11-01-23) <<
112 - correct scavenger counter for oxygen <<
113 <<
114 ## 2023-10-11 Hoang Tran (emdna-V11-01-22) <<
115 - Fixed the K shell bug in G4DNARuddIonisation <<
116 <<
117 ## 2023-10-10 Hoang Tran (emdna-V11-01-21) <<
118 - improved equilibrium processes, introduced G <<
119 <<
120 ## 2023-09-04 Gabriele Cosmo (emdna-V11-01-20) <<
121 - In navigation classes, removed references to <<
122 which is now deprecated. <<
123 <<
124 ## 2023-08-31 Gabriele Cosmo (emdna-V11-01-19) <<
125 - Removed references to unused G4GRSSolid and <<
126 <<
127 ## 2023-08-29 (emdna-V11-01-18) <<
128 - Fix minor/obvious Coverity issues <<
129 <<
130 ## 2023-07-21 Ben Morgan (emdna-V11-01-17) <<
131 - Apply core clang-tidy fixes plus those for <<
132 - Cons/destructor modernization <<
133 - Readability and logic for conditionals/boo <<
134 <<
135 ## 2023-07-12 Ben Morgan (emdna-V11-01-16) <<
136 - Apply patch from [GitHub PR 58](https://gith <<
137 - Use std::erfc to avoid precision loss <<
138 - Remove unused header <<
139 <<
140 ## 2023-06-10 Hoang Tran (emdna-V11-01-15) <<
141 - minor correction for DNA material in option6 <<
142 <<
143 ## 2023-06-09 Hoang Tran (emdna-V11-01-14) <<
144 - use analytical method for DNA material in op <<
145 <<
146 ## 2023-06-03 Vladimir Ivanchenko (emdna-V11-0 <<
147 - G4DNARuddIonisationExtendedModel - model re- <<
148 threads, applicable for scaled energy interv <<
149 an ion data is not available proton x-sectio <<
150 used, sampling of delta-electron is done usi <<
151 <<
152 ## 2023-05-25 Hoang Tran (emdna-V11-01-12) <<
153 - Modified DNA cross section file name to new <<
154 <<
155 ## 2023-05-19 Hoang Tran (emdna-V11-01-11) <<
156 - Add DNA cross section to dna_option6 <<
157 <<
158 ## 2023-05-17 Hoang Tran (emdna-V11-01-10) <<
159 - Fix Compilation warnings on XCode <<
160 <<
161 ## 2023-05-04 Hoang Tran (emdna-V11-01-09) <<
162 - correct the initial values of G4DNAEventSche <<
163 <<
164 ## 2023-04-28 Hoang Tran (emdna-V11-01-08) <<
165 - add time structure (pulsed beam) to water ra <<
166 <<
167 ## 2023-04-26 Hoang Tran (emdna-V11-01-07) <<
168 - correct KDTree bug <<
169 <<
170 ## 2023-03-24 Hoang Tran (emdna-V11-01-06) <<
171 - icsd physicslist: deleted unused model, <<
172 - Apdated RegisterModel function with new stru <<
173 - added model data to G4DNAMaterialManager sin <<
174 <<
175 ## 2023-03-08 Gabriele Cosmo (emdna-V11-01-05) <<
176 - Fixed compilation warning on macOS/XCode for <<
177 in G4DNAVacuumModel::Initialise(). <<
178 <<
179 ## 2023-02-09 Hoang Tran (emdna-V11-01-04) <<
180 - Introduced G4DNAMaterialManager to manage av <<
181 and keeps DNA cross section data in one thread <<
182 - minor change in G4VDNAModel <<
183 <<
184 ## 2023-01-27 Hoang Tran (emdna-V11-01-03) <<
185 - reorganize multiple material model of PTB mo <<
186 G4VDNAModel plays like a data layer for multip <<
187 The concrete models are independent of G4DNAMo <<
188 <<
189 ## 2023-01-17 Hoang Tran (emdna-V11-01-02) <<
190 - replaced string to material index and clean <<
191 G4DNAPTBIonisationModel, G4DNAPTBElasticModel, <<
192 G4DNAPTBExcitationStructure) - PTB models <<
193 - added material pointer members for each conc <<
194 - removed unused objects (G4DataVector()) <<
195 <<
196 ## 2023-01-06 Hoang Tran (emdna-V11-01-01) <<
197 - clean G4DNAModelInterface file for the model <<
198 <<
199 ## 2022-12-12 Hoang Tran (emdna-V11-01-00) <<
200 - fix coverity of G4DNARuddIonisationExtendedM <<
201 (Uninitialized scalar variable) from cand1 ana <<
202 <<
203 ## 2022-11-24 Vladimir Ivanchenko (emdna-V11-0 <<
204 - G4DNARuddIonisationExtendedModel - fixed com <<
205 radioactive decay module - before this upd <<
206 only 5 ions have data needed for this mode <<
207 model scaling relation to the carbon ion i <<
208 no data; low-energy limit is used now more <<
209 but not killed, because they may have radi <<
210 lines are removed from the class <<
211 <<
212 ## 2022-11-23 Gabriele Cosmo (emdna-V11-00-38) <<
213 - Fixed more compilation warnings for implicit <<
214 <<
215 ## 2022-11-22 Hoang Tran (emdna-V11-00-37) <<
216 - delete unused tests in dna (G4DNAProcessTest <<
217 <<
218 ## 2022-11-18 Gabriele Cosmo (emdna-V11-00-36) <<
219 - Fixed compilation warnings for implicit type <<
220 <<
221 ## 2022-11-08 Vladimir Ivanchenko (emdna-V11-0 <<
222 - G4DNAUeharaScreenedRutherfordElasticModel - <<
223 low and high energy limit for the model; r <<
224 <<
225 ## 2022-11-01 Hoang Tran (emdna-V11-00-34) <<
226 - Fix Coverity issues for ref-09 <<
227 <<
228 ## 2022-10-10 Hoang Tran (emdna-V11-00-33) <<
229 - minor correction of IRT-syn model (chemistry <<
230 after 1 ps. <<
231 <<
232 ## 2022-10-21 Yann Perrot, Le Tuan Anh (emdna- <<
233 - Add nitrogen models from PTra code <<
234 <<
235 ## 2022-10-10 Hoang Tran (emdna-V11-00-31) <<
236 - Fixed minor mistake of file name in G4DNARPW <<
237 - Added protection for HighEnergyLimit/LowEner <<
238 G4DNARPWBAExcitationModel <<
239 <<
240 ## 2022-10-07 Gabriele Cosmo (emdna-V11-00-30) <<
241 - Fixed compilation warnings on Intel/icx comp <<
242 but not used in G4ITNavigator2. <<
243 <<
244 ## 2022-10-05 Hoang Tran (emdna-V11-00-29) <<
245 - Fix user's report for IRT model. <<
246 If the first IRTSampling won't give any rea <<
247 <<
248 ## 2022-10-03 Hoang Tran (emdna-V11-00-28) <<
249 - Fix Coverity static analysis for ref-08 <<
250 uninit_member in G4DNAMillerGreenExcitationMo <<
251 G4DNADingfelderChargeIncreaseModel,G4DNARuddI <<
252 Use auto & instead of auto : G4ITFinder, G4DN <<
253 <<
254 ## 2022-09-08 Hoang Tran (emdna-V11-00-27) <<
255 - Resolve dependency inconsistencies : <<
256 dna/management/include/G4ChemicalMoleculeF <<
257 dna/management/include/G4UserMeshAction.hh <<
258 dna/management/include/G4OctreeFinder.hh i <<
259 <<
260 ## 2022-09-05 Ben Morgan (emdna-V11-00-26) <<
261 - Partially resolve dependency inconsistencies <<
262 - NB: cannot be resolved fully without intro <<
263 G4emdna-man, G4emdna-molman, G4emdna-utils <<
264 <<
265 ## 2022-09-01 Seth R Johnson (emdna-V11-00-25) <<
266 - Define G4CT_MAX_COUNT for changing "compile <<
267 errors on NVHPC compiler. <<
268 <<
269 ## 2022-08-30 Vladimir Ivanchenko (emdna-V11-0 <<
270 - G4DNAExcitation, G4DNAVibExcitation, G4DNARo <<
271 cleanup according to the recent G4VEmProce <<
272 headers are moved to source; C++11 keyward <<
273 <<
274 ## 2022-06-21 Igor Semeniouk (emdna-V11-00-23) <<
275 - G4DNABornIonisationModel1.cc, G4DNACPA100Ela <<
276 G4DNACPA100IonisationModel.cc, G4DNAChampion <<
277 G4DNAELSEPAElasticModel.cc, G4DNAEmfietzoglo <<
278 G4DNAIonElasticModel.cc, G4DNAQuinnPlasmonEx <<
279 G4DNARPWBAIonisationModel.cc, G4DNARelativis <<
280 G4DNASancheExcitationModel.cc : <<
281 use G4FindDataDir("G4LEDATA") to find datase <<
282 <<
283 ## 2022-06-03 Hoang Tran (emdna-V11-00-22) <<
284 - correct DNA ion definitions in G4DNARuddIoni <<
285 <<
286 ## 2022-06-01 Hoang Tran (emdna-V11-00-21) <<
287 - G4Octree : fixed Coverity warning. <<
288 <<
289 ## 2022-05-24 Hoang Tran (emdna-V11-00-20) <<
290 - update data structure to improve performance <<
291 <<
292 ## 2022-05-18 Gabriele Cosmo (emdna-V11-00-19) <<
293 - G4ITTransportation: fixed misuse of bitwise <<
294 <<
295 ## 2022-05-12 Sergio Losilla (emdna-V11-00-18) <<
296 - Added missing headers. <<
297 <<
298 ## 2022-05-11 Hoang Tran (emdna-V11-00-17) <<
299 - change the scavenging filter of the IRT beyo <<
300 <<
301 ## 2022-05-02 Hoang Tran (emdna-V11-00-16) <<
302 - Add localthread for fUse of G4VMoleculeCount <<
303 <<
304 ## 2022-04-27 Miguel A. Cortes-Giraldo and Hoa <<
305 - Incorporation of model based on RPWBA to tra <<
306 - Added G4DNARPWBAExcitationModel, G4DNARPWBAI <<
307 <<
308 ## 2022-04-25 Hoang Tran (emdna-V11-00-14) <<
309 - add UserBrownianAction in G4DNABrownianTrans <<
310 G4DNAMolecularDissociation <<
311 - replace G4int by int64_t for width integer t <<
312 - add fResetScavenger in G4SchedulerMessenger <<
313 <<
314 ## 2022-04-14 Paolo Dondero (emdna-V11-00-13) <<
315 - save local instances for recurrent access to <<
316 G4DNAMillerGreenExcitationModel, G4DNARuddIo <<
317 G4DNARuddIonisationModel <<
318 - use G4Pow and G4Log instead of std::pow and <<
319 - inside G4DNARuddIonisationExtendedModel comm <<
320 inside G4DNAGenericIonsManager <<
321 <<
322 ## 2022-04-14 Hoang Tran (emdna-V11-00-12) <<
323 - Debug the report #2235 which might be relate <<
324 - Clean code <<
325 - Delete G4ITFinder.cc <<
326 <<
327 ## 2022-04-04 Paolo Dondero (emdna-V11-00-11) <<
328 - save local instances for recurrent access to <<
329 G4DNADingfelderChargeDecreaseModel and G4DNADi <<
330 - use G4Pow and G4Log instead of std::pow and <<
331 <<
332 ## 2022-03-18 SI (emdna-V11-00-10) <<
333 - add protection in G4DNACPA100IonisationModel <<
334 <<
335 ## 2022-03-15 Hoang Tran (emdna-V11-00-09) <<
336 - remove macro commands to control the chemist <<
337 (creating models in G4SchedulerMessenger can m <<
338 - add flag OctreeFinder in IRT_syn's Initializ <<
339 <<
340 ## 2022-03-04 Hoang Tran (emdna-V11-00-08) <<
341 - add macro commands to control the chemistry <<
342 parameters including the chemical molecules an <<
343 <<
344 ## 2022-02-18 Hoang Tran (emdna-V11-00-07) <<
345 - optimize IRT-syn model, use reaction radius <<
346 - delete G4VReactionType, G4DNAReactionTypeMan <<
347 G4DNAPartiallyDiffusionControlled <<
348 - delete G4DNAIRT_geomtries <<
349 <<
350 ## 2022-02-17 Jonas Hahnfeld (emdna-V11-00-06) <<
351 - `G4ITTransportation`: Make `PrepareState` mo <<
352 - `G4DNAPolyNucleotideReactionProcess`: <<
353 - Move `PrepareState` and `State` macros int <<
354 - Make `PrepareState` more function-like, ex <<
355 - Move variable `pMoleculeA` under `G4VERBOS <<
356 <<
357 ## 2022-02-10 Hoang Tran (emdna-V11-00-05) <<
358 - add the condition of water material for the <<
359 warning in G4DNAMolecularDissociation::DecayIt <<
360 <<
361 ## 2022-02-3 Hoang Tran (emdna-V11-00-04) <<
362 - modify the macro in G4Molecule.cc and G4ITTy <<
363 <<
364 ## 2022-01-18 Jonas Hahnfeld (emdna-V11-00-03) <<
365 - Prefer pointer to `const G4Material` if poss <<
366 <<
367 ## 2022-01-17 Jonas Hahnfeld (emdna-V11-00-02) <<
368 - Remove useless `const_cast` of `G4VSensitive <<
369 <<
370 ## 2021-12-23 Hoang Tran (emdna-V11-00-01) <<
371 - add G4DNAPolyNucleotideReactionProcess, G4VD <<
372 files for DNA damage applications <<
373 <<
374 ## 2021-12-10 Ben Morgan (emdna-V11-00-00) <<
375 - Change to new Markdown History format <<
376 <<
377 --- <<
378 <<
379 # History entries prior to 11.0 <<
380 <<
381 8-11-2021, H. Tran, emdna-V10-07-15 <<
382 - corrected Circular dependencies for mesoscop <<
383 - corrected the problem in IRT <<
384 <<
385 4-11-2021, H. Tran, emdna-V10-07-14 <<
386 - define a G4FakeParticleID::fLastValue in the <<
387 delete G4FakeParticleID.cc, <<
388 solve arithmetic problems, <<
389 Added new mesoscopic model for dna chemistry <<
390 <<
391 21-10-2021, W.G.Shin, emdna-V10-07-13 <<
392 - Added a virtual classes for DNA geometry - G <<
393 Modified classes - G4DNAIRT, G4DNAIRTMolecul <<
394 G4ITModelProcessor, G4Sch <<
395 G4DNAMolecularReactionTab <<
396 <<
397 23-09-2021, A. Ribon, emdna-V10-07-12 <<
398 - G4ITTransportation, G4DNAElastic, G4DNAExcit <<
399 G4DNAVibExcitation, G4DNAAttachment, G4DNACh <<
400 G4DNAChargeIncrease, G4DNAElectronSolvation, <<
401 G4DNASecondOrderReaction, G4DNAElectronHoleR <<
402 G4DNABrownianTransportation : replaced hardw <<
403 with enum values introduced in the new class <<
404 <<
405 18-07-2021, V. Ivanchenko, emdna-V10-07-11 <<
406 - G4DNABohrExcitationModel2, G4DNABohrIonisati <<
407 G4VLEPSModel - updated interfaces to G4Physi <<
408 <<
409 16-07-2021, D. Sakata, emdna-V10-07-10 <<
410 - Fixed initialization error in G4DNAELSEPAEla <<
411 <<
412 28-06-2021, G. Cosmo, emdna-V10-07-09 <<
413 - Fixed compilation error in G4ITMultiNavigato <<
414 enabled. <<
415 <<
416 31-05-2021, D.Sakata S. Guatelli, emdna-V10-07 <<
417 - Added new classes G4DNADiracRMatrixExcitatio <<
418 G4DNAQuinnPlasmonExcitatio <<
419 G4DNARelativisticIonisatio <<
420 G4DNAPlasmonExcitation <<
421 - Modified G4DNAELSEPAElasticModel for gold <<
422 <<
423 9-05-2021, H.Tran, tag emdna-V10-07-07 <<
424 - Add IRT-syn model <<
425 <<
426 16-04-2021, B.Morgan, tag emdna-V10-07-06 <<
427 - Migrate build to modular CMake API <<
428 <<
429 27-04-2021, H.Tran, tag emdna-V10-07-05 <<
430 - G4DNAElectronHoleRecombination: added Octree <<
431 - G4DNABrownianTransportation: modified AlongS <<
432 - added OctreeFinder and IRTUtils <<
433 <<
434 26-04-2021, V.Ivanchenko, tag emdna-V10-07-04 <<
435 - G4DNABornAngle, G4DNARuddAngle - updated pri <<
436 <<
437 12-03-2021, L.Pandola, tag emdna-V10-07-03 <<
438 - Move DNA-related Unit Tests from lowenergy/t <<
439 <<
440 24-02-2021, G.Cosmo, tag emdna-V10-07-02 <<
441 - Fixed dependency on g4tools, now moved to ex <<
442 <<
443 16-02-2021, W.G.Shin, tag emdna-V10-07-01 <<
444 - G4DNAElectronHoleRecombination <<
445 Dissociation channel of electron-hole recomb <<
446 G4EmDNAChemistry, _option1, _option2, _optio <<
447 - G4DNAWaterDissociationDisplacer <<
448 Added the fragment displacement for new diss <<
449 <<
450 29-10-2020, G.Cosmo, tag emdna-V10-06-12 <<
451 - Fix thread contention on mutable data in G4D <<
452 help resolving observed crashes in MT runs. <<
453 Some code cleanup. <<
454 <<
455 27-10-2020, V.Ivanchenko, tag emdna-V10-06-11 <<
456 - G4DNAMolecularMaterial - removed commented l <<
457 - History file fixed <<
458 <<
459 25-10-2020, V.Ivanchenko, tag emdna-V10-06-10 <<
460 - G4DNAMolecularMaterial - attempt to fix nigh <<
461 in chem6 example - do not delete instance of <<
462 <<
463 24-10-2020, I. Hrivnacova, tag emdna-V10-06-09 <<
464 - Added dependency on analysis/g4tools in GNUm <<
465 required after analysis update (analysis-V10 <<
466 <<
467 12-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 <<
468 - Fixed coverity warning <<
469 <<
470 10-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 <<
471 - Fixed coverity warnings <<
472 - Fix of IRT bug <<
473 (protection for the crash induced by empty re <<
474 <<
475 28-05-2020, B.Morgan, tag emdna-V10-06-06 <<
476 - Add missing G4analysismng module dependency <<
477 <<
478 20-05-20: W.G.Shin emdna-V10-06-05 <<
479 - Revised displacement of OH radicals of B1A1 <<
480 based on momentum conservation in G4DNAWaterDi <<
481 - Added missing History <<
482 <<
483 26-04-20: W.G.Shin emdna-V10-06-04 <<
484 - Fixed coverity test <<
485 <<
486 15-04-20: G.Cosmo emdna-V10-06-03 <<
487 - G4MoleculeDefinition: copy constructor and a <<
488 are not allowed (as for G4ParticleDefinition <<
489 <<
490 19-02-20: W.G.Shin emdna-V10-06-02 <<
491 - Fixed memory issue on G4DNAMolecularReaction <<
492 - Revised headeres of IRT classes <<
493 <<
494 12-02-20: W.G.Shin emdna-V10-06-01 <<
495 - Added protections floating point exception i <<
496 <<
497 10-01-20: W.G.Shin emdna-V10-06-00 <<
498 - Added classes for IRT <<
499 - Added features in management classes for IRT <<
500 G4ITModelProcessor ...) <<
501 - Added features in G4DNAMolecularReactionTabl <<
502 - Added molecules of Plante et al. (2017) (Oxy <<
503 <<
504 15-11-19: G.Cosmo emdna-V10-05-11 <<
505 - Fixed cases of implicit type conversions fro <<
506 <<
507 8-11-19: HT, tag emdna-V10-05-10 <<
508 - Fixed the exception divide by zero of diffus <<
509 G4DNABrownianTransportation::AlongStepGetPhysi <<
510 for the case of static molecules (DNA) (diffus <<
511 <<
512 24-10-19: J.Apostolakis, tag emdna-V10-05-09 <<
513 - Enabled G4ItNavigator{1,2} to flag if it enc <<
514 of external physical volume (meant for adapt <<
515 <<
516 19-10-19: WGS, SI, tag emdna-V10-05-08 <<
517 - Added new model G4DNAELSEPAElasticModel <<
518 <<
519 11-10-19: WGS, SI, tag emdna-V10-05-07 <<
520 - G4DNAOneStepThermalizationModel.* : <<
521 added Kreipl and Meesungnoen amorphous ice mod <<
522 - G4DNAWaterDissociationDisplacer* : updated <<
523 <<
524 03-06-2019, MK, tag emdna-V10-05-06 <<
525 - Fix GCC9 warnings <<
526 <<
527 26-03-2019, HT, tag emdna-V10-05-05 <<
528 - Added G4DNAMolecule <<
529 <<
530 10-03-2019, MK, tag emdna-V10-05-04 <<
531 - Fix reaction site issue <<
532 - Chemistry: clarify pointer ownership, clean <<
533 <<
534 11-03-2019, G.Cosmo, tag emdna-V10-05-03 <<
535 - Fixed typos in printouts in G4MolecularConfi <<
536 G4VITRestProcess, G4DNAElectronHoleRecombina <<
537 <<
538 18-01-2019, HT, tag emdna-V10-05-02 <<
539 - Transformed the exception into warning in G4 <<
540 <<
541 28-12-2018, MK, tag emdna-V10-05-01 <<
542 DEV-300 : G4DNAChemistryManager clarify pointe <<
543 <<
544 05-01-2019, HT, tag emdna-V10-05-00 <<
545 - moved the checking position of track status <<
546 in G4ITStepProcessor::SetInitialStep() <<
547 <<
548 01-09-2018, SI, tag emdna-V10-04-10 <<
549 renamed tag <<
550 <<
551 01-09-2018, SI, tag emdna-v10-04-09 <<
552 - bugzilla 2084 <<
553 https://bugzilla-geant4.kek.jp/show_bug.cgi?id <<
554 <<
555 30-07-2018, SI, tag emdna-V10-04-08 <<
556 - included upper energy limit of models (2) <<
557 <<
558 29-07-2018, SI, tag emdna-V10-04-07 <<
559 - included upper energy limit of models <<
560 <<
561 01-07-2018, SI, tag emdna-V10-04-06 <<
562 - added protection in Auger emission <<
563 <<
564 30-06-2018, MS, ZF, SI tag emdna-V10-04-05 <<
565 - updated Si mass in G4DNAGenericIonsManager <<
566 <<
567 22-06-2018, SI tag emdna-V10-04-04 <<
568 - fixed warnings in lepts models <<
569 <<
570 14-05-2018, SI tag emdna-V10-04-03 <<
571 - chemistry update by Mathieu <<
572 <<
573 01-05-2018, SI tag emdna-V10-04-02 <<
574 - chemistry update by Mathieu <<
575 <<
576 09-02-2018, M.Asai tag emdna-V10-04-01 <<
577 - G4DNAMolecularMaterial.cc : <<
578 GetDensityTableFor() and GetNumMolPerVolTabl <<
579 at G4State_Init rather than G4State_Idle. <<
580 - Co-works with run-V10-04-01 and global-V10-0 <<
581 <<
582 21-12-2017, G.Cosmo tag emdna-V10-04-00 <<
583 - Fixed self-consistency in headers (missing # <<
584 G4KDNode, G4MoleculeIterator and G4LEPTSDiff <<
585 Fixed spurious definition of G4IT namespace <<
586 Thanks to Raphael Isemann for reporting thes <<
587 <<
588 01-11-2017, MK tag emdna-V10-03-30 <<
589 - remove models/test directory <<
590 <<
591 31-10-2017, JA ( tag missing ) <<
592 - G4KDNode.hh: Add missing included file - nee <<
593 <<
594 16-08-2017, SI tag emdna-V10-03-28 <<
595 - updated variable types in models <<
596 <<
597 10-08-2017, SI tag emdna-V10-03-27 <<
598 - test <<
599 <<
600 10-08-2017, SI tag emdna-V10-03-26 <<
601 - same as previous <<
602 <<
603 09-08-2017, SI tag emdna-V10-03-25 <<
604 - same as previous <<
605 <<
606 09-08-2017, SI tag emdna-V10-03-24 <<
607 - G4DNAEmfietzoglouIonisationModel: added prot <<
608 <<
609 03-08-2017, VI tag emdna-V10-03-23 <<
610 - G4DNAExcitation, G4DNAIonisation - make cohe <<
611 <<
612 28-07-2017, SI, tag emdna-V10-03-22 <<
613 - added stationary mode flag to CPA100 ionisat <<
614 <<
615 04-07-2017, SI, tag emdna-V10-03-21 <<
616 - added tagging of atom. deexc. products in io <<
617 <<
618 31-05-2017, SM, tag emdna-V10-03-20 <<
619 - Correct windows issues with path of diff. CS <<
620 <<
621 31-05-2017, SI, tag emdna-V10-03-19 <<
622 - roll-back (Windows issues with previous tag) <<
623 <<
624 24-05-2017, SI, tag emdna-V10-03-18 <<
625 - added tagging of atom. deexc. products in io <<
626 <<
627 11-05-2017, VI tag emdna-V10-03-17 <<
628 - fix for gcc 7.1 warnings in G4DNACrossSectio <<
629 <<
630 10-05-2017, NL, MK, SI, tag emdna-V10-03-16 <<
631 - fix for gcc 7.1 warnings in G4DNACrossSectio <<
632 <<
633 03-05-2017, SM, tag emdna-V10-03-15 <<
634 - add the new G4DNADummyModel and allow the co <<
635 <<
636 27-04-2017, SM, tag emdna-V10-03-14 <<
637 - correct small typo mistakes. <<
638 <<
639 27-04-2017, SM, tag emdna-V10-03-13 <<
640 - update Models/G4DNAModelInterface to correct <<
641 <<
642 10-03-2017, MK, tag emdna-V10-03-12 <<
643 - update utils/GNUmakefile <<
644 <<
645 13-02-2017, MK, tag emdna-V10-03-11 <<
646 - G4DNAMolecularMaterial: update doxygen doc <<
647 <<
648 13-02-2017, MK, tag emdna-V10-03-10 <<
649 - G4DNAMolecularMaterial: <<
650 remove newly introduced methods, add fatal e <<
651 add doxygen documentation <<
652 <<
653 10-02-2017, MK, tag emdna-V10-03-09 <<
654 - Introducing G4PhysChemIO <<
655 - Move call to G4TrackList::Pop(track) from G4 <<
656 to G4ITTrackHolder. And make sure track stat <<
657 when G4ITTrackHolder::PushToKill is called. <<
658 <<
659 09-02-2017, MK, tag emdna-V10-03-08 <<
660 - G4KDNode.hh: remove unused G4ThreeVector hea 18 - G4KDNode.hh: remove unused G4ThreeVector header
661 - G4KDMap.hh: int->size_t + indentation 19 - G4KDMap.hh: int->size_t + indentation
662 - G4KDMap.cc: int->size_t 20 - G4KDMap.cc: int->size_t
663 - G4IT & G4Molecule: template specialization 21 - G4IT & G4Molecule: template specialization
664 template<> G4KDNode<G4IT / G4Molecule>::~G4K 22 template<> G4KDNode<G4IT / G4Molecule>::~G4KDNode()
665 23
666 24-01-2017, SM, tag emdna-V10-03-07 <<
667 - add a ifdef to remove a warning (windows onl <<
668 <<
669 23-01-2017, SM, tag emdna-V10-03-06 <<
670 - add missing G4DNAModelInterface files (.hh a <<
671 <<
672 23-01-2017, SM CV, tag emdna-V10-03-05 <<
673 - add new G4DNAPTB* classes and the structure <<
674 <<
675 14-01-2017, MK, tag emdna-V10-02-37 24 14-01-2017, MK, tag emdna-V10-02-37
676 - Prevent a crash when calling G4ITTrackingMan << 25 - Prevent a crash when calling G4ITTrackingManager::EndTracking from
677 the UserTimeStepAction::PostTimeStepAction 26 the UserTimeStepAction::PostTimeStepAction
678 - Add missing: G4ITTrackingManager* G4Schedule 27 - Add missing: G4ITTrackingManager* G4Scheduler::GetTrackingManager()
679 28
680 28-12-2016, SI, tag emdna-V10-03-04 <<
681 - extended upper energy limit of protons for <<
682 G4DNARuddIonisationExtendedModel <<
683 <<
684 27-12-2016, SI, tag emdna-V10-03-03 <<
685 - updated references of CPA100 classes <<
686 <<
687 23-12-2016, SI, tag emdna-V10-03-02 <<
688 - updated sources.cmake <<
689 <<
690 23-12-2016, SI, tag emdna-V10-03-01 <<
691 - commit of first CPA100 classes, part 2 <<
692 <<
693 21-12-2016, SI, tag emdna-V10-03-00 <<
694 - commit of first CPA100 classes <<
695 <<
696 27-11-2016, MK, tag emdna-V10-02-36 29 27-11-2016, MK, tag emdna-V10-02-36
697 - G4Electron_aq: correct charge 30 - G4Electron_aq: correct charge
698 - G4DNADamages -> G4DNADamage 31 - G4DNADamages -> G4DNADamage
699 32
700 17-11-2016, MK, tag emdna-V10-02-35 33 17-11-2016, MK, tag emdna-V10-02-35
701 - G4ManyFastLists.hh: iterator::GetTrackList() 34 - G4ManyFastLists.hh: iterator::GetTrackList() correct type returned
702 35
703 16-11-2016, MK, tag emdna-V10-02-34 36 16-11-2016, MK, tag emdna-V10-02-34
704 - G4VMolecularDissociationDisplacer & G4DNAWat << 37 - G4VMolecularDissociationDisplacer & G4DNAWaterDissociationDisplacer:
705 displacement types can be thread shared 38 displacement types can be thread shared
706 - G4TrackState: Move implementation of static << 39 - G4TrackState: Move implementation of static function
707 G4VTrackStateID::Create() to c 40 G4VTrackStateID::Create() to cc file - windows crash
708 41
709 15-11-2016, MK, tag emdna-V10-02-33 42 15-11-2016, MK, tag emdna-V10-02-33
710 - G4VMolecularDissociationDisplacer.cc: add mi 43 - G4VMolecularDissociationDisplacer.cc: add missing initializer
711 44
712 14-11-2016, MK, tag emdna-V10-02-32 45 14-11-2016, MK, tag emdna-V10-02-32
713 - Separate def and impl of dissociation flag t << 46 - Separate def and impl of dissociation flag to prevent issue with
714 windows platforms 47 windows platforms
715 48
716 14-11-2016, MK, tag emdna-V10-02-31 49 14-11-2016, MK, tag emdna-V10-02-31
717 - G4DNAOneStepThermalizationModel.cc: << 50 - G4DNAOneStepThermalizationModel.cc:
718 tag init constexpr factor with number rather 51 tag init constexpr factor with number rather than expression
719 52
720 14-11-2016, MK, tag emdna-V10-02-30 53 14-11-2016, MK, tag emdna-V10-02-30
721 - Use CLHEP::pi instead of M_PI 54 - Use CLHEP::pi instead of M_PI
722 55
723 14-11-2016, MK, tag emdna-V10-02-29 56 14-11-2016, MK, tag emdna-V10-02-29
724 - Correct bracket enclosing 57 - Correct bracket enclosing
725 58
726 14-11-2016, MK, tag emdna-V10-02-28 59 14-11-2016, MK, tag emdna-V10-02-28
727 - G4VMoleculeCounter: move imp of static metho 60 - G4VMoleculeCounter: move imp of static methods to cc to avoid crash on win
728 - Update displacers, oneStepTherm 61 - Update displacers, oneStepTherm
729 - WaterDisplacer: change the electron thermali 62 - WaterDisplacer: change the electron thermalization distribution
730 - OneStepTherm: two inner thermalization model 63 - OneStepTherm: two inner thermalization models can be chosen as template argument
731 - Adds and use G4CTCounter 64 - Adds and use G4CTCounter
732 65
733 02-11-2016, MK, tag emdna-V10-02-27 66 02-11-2016, MK, tag emdna-V10-02-27
734 - add G4VMoleculeCounter & enable using custom << 67 - add G4VMoleculeCounter & enable using custom molecule counter
735 - pass location information to molecule counte 68 - pass location information to molecule counter
736 - G4ITNavigator2: relocate voxelNavigator befo << 69 - G4ITNavigator2: relocate voxelNavigator before every call to
737 computeStep & computeSafety << 70 computeStep & computeSafety
738 71
739 07-08-2016, SI, tag emdna-V10-02-26 72 07-08-2016, SI, tag emdna-V10-02-26
740 - added stationnary mode to sub-excitation ele 73 - added stationnary mode to sub-excitation electron processes
741 74
742 23-06-2016, MK 75 23-06-2016, MK
743 - G4Scheduler: move G4IosFlagsSaver to Process 76 - G4Scheduler: move G4IosFlagsSaver to Process()
744 77
745 3-06-2016, MK, tag emdna-V10-02-25 78 3-06-2016, MK, tag emdna-V10-02-25
746 - G4DNAScreenedRutherfordElasticModel: modify 79 - G4DNAScreenedRutherfordElasticModel: modify handling of energy boundaries
747 at init time 80 at init time
748 - G4DNAUeharaScreenedRutherfordElasticModel: m 81 - G4DNAUeharaScreenedRutherfordElasticModel: move up "if(isInitialised)"
749 82
750 3-06-2016, MK, tag emdna-V10-02-24 83 3-06-2016, MK, tag emdna-V10-02-24
751 - G4DNAScreenedRutherfordElasticModel.hh: remo 84 - G4DNAScreenedRutherfordElasticModel.hh: remove killBelowEnergy,
752 SetKillBelowThreshold deprecated 85 SetKillBelowThreshold deprecated
753 - G4DNAScreenedRutherfordElasticModel.cc: remo 86 - G4DNAScreenedRutherfordElasticModel.cc: remove killBelowEnergy, modify init to
754 prevent erasing/rewriting data (use isInit) 87 prevent erasing/rewriting data (use isInit)
755 - G4DNAChampionElasticModel.hh: rearrange decl 88 - G4DNAChampionElasticModel.hh: rearrange declaration of attributes
756 - G4DNAChampionElasticModel.cc: move up if (i 89 - G4DNAChampionElasticModel.cc: move up if (isInitialised) { return; }
757 - G4DNAUeharaScreenedRutherfordElasticModel.cc << 90 - G4DNAUeharaScreenedRutherfordElasticModel.cc: add exception at init time if
758 model used for another part than e- 91 model used for another part than e-
759 92
760 1-06-2016, MK, tag emdna-V10-02-23 93 1-06-2016, MK, tag emdna-V10-02-23
761 - G4DNAChemistryManager::CreateWaterMolecule: 94 - G4DNAChemistryManager::CreateWaterMolecule: reverse electronicLevel
762 logic for interface with physics models 95 logic for interface with physics models
763 96
764 31-05-2016, MK, tag emdna-V10-02-22 97 31-05-2016, MK, tag emdna-V10-02-22
765 - G4DNAChampionElasticModel.cc: reset check ek 98 - G4DNAChampionElasticModel.cc: reset check ekin >= LowEnergyLimit()
766 99
767 28-05-2016, MK, tag emdna-V10-02-21 100 28-05-2016, MK, tag emdna-V10-02-21
768 - G4DNAChampionElasticModel.cc: add missing "s 101 - G4DNAChampionElasticModel.cc: add missing "sigma = ..." after
769 one of the previous tags 102 one of the previous tags
770 103
771 19-05-2016, MK, tag emdna-V10-02-20 104 19-05-2016, MK, tag emdna-V10-02-20
772 - G4ITNavigator: remove warnings on gcc6.1 105 - G4ITNavigator: remove warnings on gcc6.1
773 106
774 17-05-2016, MK, tag emdna-V10-02-19 107 17-05-2016, MK, tag emdna-V10-02-19
775 - G4DNAElectronSolvation, G4DNAOneStepThermali 108 - G4DNAElectronSolvation, G4DNAOneStepThermalizationModel:
776 correct model and process names for solvation 109 correct model and process names for solvation
777 110
778 12-05-2016, MK, tag emdna-V10-02-18 111 12-05-2016, MK, tag emdna-V10-02-18
779 - G4DNAChampionElasticModel.hh: << 112 - G4DNAChampionElasticModel.hh:
780 * GetKillBelowThreshold is deprecated 113 * GetKillBelowThreshold is deprecated
781 * Removed attributes: killBelowEnergy, lowEne << 114 * Removed attributes: killBelowEnergy, lowEnergyLimit, highEnergyLimit,
782 tableFile, tableData 115 tableFile, tableData
783 * Method Theta(): remove G4ParticleDefinition 116 * Method Theta(): remove G4ParticleDefinition * aParticleDefinition
784 - G4DNAUeharaScreenedRutherfordElasticModel.hh 117 - G4DNAUeharaScreenedRutherfordElasticModel.hh:
785 * SetKillBelowThreshold, GetKillBelowThreshol 118 * SetKillBelowThreshold, GetKillBelowThreshold are depreceted
786 (use G4LowECapture or G4DNAElectronSolvatatio 119 (use G4LowECapture or G4DNAElectronSolvatation)
787 * SelectHighEnergyLimit uses SetHighEnergyLim << 120 * SelectHighEnergyLimit uses SetHighEnergyLimit instead and a warning is
788 emitted when used 121 emitted when used
789 * Removed attributes: killBelowEnergy, lowEne 122 * Removed attributes: killBelowEnergy, lowEnergyLimit, highEnergyLimit
790 - G4DNAChampionElasticModel.cc & G4DNAUeharaSc 123 - G4DNAChampionElasticModel.cc & G4DNAUeharaScreenedRutherfordElasticModel.cc:
791 * Verbose check only if preprocessor flag is 124 * Verbose check only if preprocessor flag is triggered -> recompile
792 * Energy boundaries checked in Initialise() - 125 * Energy boundaries checked in Initialise() -> reset if needed
793 * Call to G4Electron removed in Initialise() 126 * Call to G4Electron removed in Initialise() -> check using particle name
794 * Cleanup CrossSectionPerVolume by removing u 127 * Cleanup CrossSectionPerVolume by removing unnecessary checks and calls to map
795 * SampleSecondaries(): remove "kill below thr 128 * SampleSecondaries(): remove "kill below threshold" and energy checks
796 * G4DNAChampionElasticModel::Theta remove che 129 * G4DNAChampionElasticModel::Theta remove check particle == G4Electron
797 - G4DNAOneStepThermalizationModel.cc: 130 - G4DNAOneStepThermalizationModel.cc:
798 * Check verbose flag if a preprocessor flag i 131 * Check verbose flag if a preprocessor flag is trigerred
799 * Remove call to G4Electron at initialization 132 * Remove call to G4Electron at initialization time
800 - G4DNATransformElectronModel.cc: 133 - G4DNATransformElectronModel.cc:
801 * Check verbose flag if a preprocessor flag i 134 * Check verbose flag if a preprocessor flag is trigerred
802 * Remove call to G4Electron at initialization 135 * Remove call to G4Electron at initialization time
803 * Add check if(G4DNAChemistryManager::IsActiv << 136 * Add check if(G4DNAChemistryManager::IsActivated()) then solvated electron
804 created; otherwise, the primary electron is 137 created; otherwise, the primary electron is killed
805 138
806 30-04-2016, MK, tag emdna-V10-02-17 139 30-04-2016, MK, tag emdna-V10-02-17
807 - G4VUserChemistryList: Add flag fIsPhysicsCon 140 - G4VUserChemistryList: Add flag fIsPhysicsConstructor
808 141
809 30-04-2016, MK, tag emdna-V10-02-16 142 30-04-2016, MK, tag emdna-V10-02-16
810 - G4VUserChemistryList: remove a if statement 143 - G4VUserChemistryList: remove a if statement
811 - G4MoleculeCounter: at initialization time, p << 144 - G4MoleculeCounter: at initialization time, prevent creating entries for
812 unregistered molecule definition 145 unregistered molecule definition
813 146
814 22-04-2016, MK, tag emdna-V10-02-15 147 22-04-2016, MK, tag emdna-V10-02-15
815 - G4DNAElectronSolvatation -> G4DNAElectronSol 148 - G4DNAElectronSolvatation -> G4DNAElectronSolvation
816 - G4DNASancheExcitationModel: remove warning w 149 - G4DNASancheExcitationModel: remove warning when SANCHE_VERBOSE is OFF
817 150
818 22-04-2016, MK, tag emdna-V10-02-14 151 22-04-2016, MK, tag emdna-V10-02-14
819 - G4DNAMeltonAttachmentModel, G4DNASancheExcit << 152 - G4DNAMeltonAttachmentModel, G4DNASancheExcitationModel:
820 remove usage of internal energy boundaries 153 remove usage of internal energy boundaries
821 154
822 19-03-2016, SI, tag emdna-V10-02-13 155 19-03-2016, SI, tag emdna-V10-02-13
823 - added nrj extensibility to SR and USR models 156 - added nrj extensibility to SR and USR models
824 157
825 11-03-2016, SI, tag emdna-V10-02-12 158 11-03-2016, SI, tag emdna-V10-02-12
826 -roll back to files in emdna-V10-02-06 159 -roll back to files in emdna-V10-02-06
827 160
828 10-03-2016, SI, tag emdna-V10-02-11 161 10-03-2016, SI, tag emdna-V10-02-11
829 -further cleaning of G4DNAUeharaScreenedRuther 162 -further cleaning of G4DNAUeharaScreenedRutherfordElasticModel
830 and G4DNAScreenedRutherfordElasticModel 163 and G4DNAScreenedRutherfordElasticModel
831 164
832 10-03-2016, SI, tag emdna-V10-02-10 165 10-03-2016, SI, tag emdna-V10-02-10
833 -further cleaning of G4DNAUeharaScreenedRuther 166 -further cleaning of G4DNAUeharaScreenedRutherfordElasticModel
834 167
835 07-03-2016, SI, tag emdna-V10-02-09 168 07-03-2016, SI, tag emdna-V10-02-09
836 -added possibility to extend applicability lim 169 -added possibility to extend applicability limit
837 of G4DNAUeharaScreenedRutherfordElasticModel 170 of G4DNAUeharaScreenedRutherfordElasticModel
838 171
839 06-03-2016, SI, tag emdna-V10-02-08 172 06-03-2016, SI, tag emdna-V10-02-08
840 -removed useless G4Pow declaration 173 -removed useless G4Pow declaration
841 174
842 04-03-2016, SI, tag emdna-V10-02-07 175 04-03-2016, SI, tag emdna-V10-02-07
843 -replaced std::log by G4Log 176 -replaced std::log by G4Log
844 -replaced std::log10() by G4Log()/g4pow->logZ( 177 -replaced std::log10() by G4Log()/g4pow->logZ(10)
845 178
846 02-03-2016, SI, tag emdna-V10-02-06 179 02-03-2016, SI, tag emdna-V10-02-06
847 -replaced std::exp by G4Exp 180 -replaced std::exp by G4Exp
848 181
849 02-03-2016, SI, tag emdna-V10-02-05 182 02-03-2016, SI, tag emdna-V10-02-05
850 -replaced std::exp by G4Exp 183 -replaced std::exp by G4Exp
851 184
852 02-03-2016, SI, tag emdna-V10-02-04 185 02-03-2016, SI, tag emdna-V10-02-04
853 -replaced std::exp by G4Exp 186 -replaced std::exp by G4Exp
854 187
855 01-03-2016, SI, tag emdna-V10-02-03 188 01-03-2016, SI, tag emdna-V10-02-03
856 * update of fast computation of: 189 * update of fast computation of:
857 -G4DNAScreenRutherfordElasticModel 190 -G4DNAScreenRutherfordElasticModel
858 -G4DNAUeharaScreenRutherfordElasticModel 191 -G4DNAUeharaScreenRutherfordElasticModel
859 by S. Okada (KEK, JP) 192 by S. Okada (KEK, JP)
860 193
861 17-02-2016, MK, tag emdna-V10-02-02 194 17-02-2016, MK, tag emdna-V10-02-02
862 * G4MoleculeCounter: remove check of c++ versi 195 * G4MoleculeCounter: remove check of c++ version for unique_ptr/auto_ptr selection
863 196
864 16-12-2015, SI, tag emdna-V10-02-01 197 16-12-2015, SI, tag emdna-V10-02-01
865 * Ionisation models : in SampleSecondaries: << 198 * Ionisation models : in SampleSecondaries:
866 added protection on energy for interpolation m 199 added protection on energy for interpolation method change
867 200
868 16-12-2015, SI, tag emdna-V10-02-00 201 16-12-2015, SI, tag emdna-V10-02-00
869 * G4DNAIonElasticModel::SampleSecondaries: add << 202 * G4DNAIonElasticModel::SampleSecondaries: added protection on
870 energy 203 energy
871 204
872 13-11-2015, MK, tag emdna-V10-01-55 205 13-11-2015, MK, tag emdna-V10-01-55
873 * G4MoleculeCounter::Use / InUse => move imple 206 * G4MoleculeCounter::Use / InUse => move implementation to source
874 file 207 file
875 208
876 10-11-2015, MK, tag emdna-V10-01-54 209 10-11-2015, MK, tag emdna-V10-01-54
877 * remove unused variables 210 * remove unused variables
878 211
879 10-11-2015, MK, tag emdna-V10-01-53 212 10-11-2015, MK, tag emdna-V10-01-53
880 * Coverity fixes 213 * Coverity fixes
881 214
882 06-11-2015, MK, tag emdna-V10-01-52 215 06-11-2015, MK, tag emdna-V10-01-52
883 * G4DNAWaterDissociationDisplacer: remove usel 216 * G4DNAWaterDissociationDisplacer: remove useless verbose
884 217
885 06-11-2015, MK, tag emdna-V10-01-51 218 06-11-2015, MK, tag emdna-V10-01-51
886 * G4FastList.hh : use WatcherSet::iterator to 219 * G4FastList.hh : use WatcherSet::iterator to avoid compilation errors
887 on x86_64-slc6-gcc49-Seq-BoundsCheck-UseIntern 220 on x86_64-slc6-gcc49-Seq-BoundsCheck-UseInternalCLHEP
888 221
889 06-11-2015, MK, tag emdna-V10-01-50 222 06-11-2015, MK, tag emdna-V10-01-50
890 * Avoid indirect include of G4TrackState to G4 223 * Avoid indirect include of G4TrackState to G4physicslists category
891 * Reorganize includes 224 * Reorganize includes
892 * Add G4ITStepProcessorState_Lock.hh 225 * Add G4ITStepProcessorState_Lock.hh
893 226
894 06-11-2015, MK, tag emdna-V10-01-49 227 06-11-2015, MK, tag emdna-V10-01-49
895 * G4MoleculeCounter: do not initialize compDou 228 * G4MoleculeCounter: do not initialize compDoubleWithPrecision::fPrecision
896 to other value than 0 - causing compilation er 229 to other value than 0 - causing compilation errors on windows
897 * G4DNAOneStepThermalizationModel: do not incl 230 * G4DNAOneStepThermalizationModel: do not include G4ITNavigator in the header
898 but in the source file - causing crashes on wi 231 but in the source file - causing crashes on windows
899 232
900 04-11-2015, MK, tag emdna-V10-01-48 233 04-11-2015, MK, tag emdna-V10-01-48
901 * G4DNARevertProbability: added and used in G4 234 * G4DNARevertProbability: added and used in G4DNAWaterDissociationDisplacer
902 * utils/sources.cmake: G4DNARevertProbability. 235 * utils/sources.cmake: G4DNARevertProbability.hh added
903 * G4DNAWaterDissociationDisplacer: fix and spe 236 * G4DNAWaterDissociationDisplacer: fix and speed up distributions
904 * models/GNUmakefile: add missing dependency 237 * models/GNUmakefile: add missing dependency
905 * G4DNAOneStepThermalizationModel: delete navi 238 * G4DNAOneStepThermalizationModel: delete navigator state when model
906 is deleted 239 is deleted
907 * G4FastList.icc: use typedef WatcherSet even 240 * G4FastList.icc: use typedef WatcherSet even when iterators are used
908 * G4ITModelProcessor: add RegisterModel, GetCo 241 * G4ITModelProcessor: add RegisterModel, GetComputeTimeStep +
909 fComputeTimeStep & fComputeReaction flags 242 fComputeTimeStep & fComputeReaction flags
910 * G4DNAElectronHoleRecombination: enable using << 243 * G4DNAElectronHoleRecombination: enable using this model even when not
911 all dissociation products have been defined 244 all dissociation products have been defined (they will just not be taken
912 into account) 245 into account)
913 * G4DNAMolecularReactionTable: delete reaction 246 * G4DNAMolecularReactionTable: delete reaction data when table is deleted
914 247
915 03-11-2015, MK, tag emdna-V10-01-47 248 03-11-2015, MK, tag emdna-V10-01-47
916 * G4Scheduler: Update time before G4ITStepProc 249 * G4Scheduler: Update time before G4ITStepProcessor::DoIt
917 * G4ITStepProcessor::DoIt : reset leading trac << 250 * G4ITStepProcessor::DoIt : reset leading tracks at the end of
918 the call 251 the call
919 252
920 03-11-2015, MK, tag emdna-V10-01-46 253 03-11-2015, MK, tag emdna-V10-01-46
921 * G4MolecularDissociation 254 * G4MolecularDissociation
922 * G4DNAOneStepSolvatationModel -> G4DNAOneStep 255 * G4DNAOneStepSolvatationModel -> G4DNAOneStepThermalizationModel
923 Avoid placing products outside volume of the 256 Avoid placing products outside volume of the mother track
924 (causing navigator complains) 257 (causing navigator complains)
925 << 258
926 03-11-2015, MK, tag emdna-V10-01-45 259 03-11-2015, MK, tag emdna-V10-01-45
927 * G4Serialize: Add definition in header for G4 260 * G4Serialize: Add definition in header for G4String
928 261
929 02-11-2015, MK, tag emdna-V10-01-44 262 02-11-2015, MK, tag emdna-V10-01-44
930 * G4Serialize: remove inline in front of templ 263 * G4Serialize: remove inline in front of template
931 * molecules: fix unit tests 264 * molecules: fix unit tests
932 * G4DNAElectronHoleRecombination: add missing 265 * G4DNAElectronHoleRecombination: add missing check on G4MoleculeCounter::InUse
933 * G4MoleculeCounter: add a flag to check or no 266 * G4MoleculeCounter: add a flag to check or not against scheduler time
934 * G4MoleculeTable: do not store G4MolecularCon << 267 * G4MoleculeTable: do not store G4MolecularConf anymore
935 -> G4MolecularConfMan is taking care of this 268 -> G4MolecularConfMan is taking care of this
936 << 269
937 30-10-2015, MK, tag emdna-V10-01-43 270 30-10-2015, MK, tag emdna-V10-01-43
938 * Bug solved in G4MoleculeCounter << 271 * Bug solved in G4MoleculeCounter
939 and made compatible wih G4DNAElectronHoleRec 272 and made compatible wih G4DNAElectronHoleRecombination (temporary)
940 * Unit tests corrected 273 * Unit tests corrected
941 * G4VITDiscreteProcess added 274 * G4VITDiscreteProcess added
942 * G4ReactionTableMessenger added 275 * G4ReactionTableMessenger added
943 * Intermediate update for 10.2 release 276 * Intermediate update for 10.2 release
944 << 277
945 27-10-2015, MK, tag emdna-V10-01-42 278 27-10-2015, MK, tag emdna-V10-01-42
946 * G4ITStepProcessor: clean dynamic_cast to G4V 279 * G4ITStepProcessor: clean dynamic_cast to G4VITProcess
947 << 280
948 26-10-2015, MK, tag emdna-V10-01-41 281 26-10-2015, MK, tag emdna-V10-01-41
949 * Sanche model: try to solve std::vector out o 282 * Sanche model: try to solve std::vector out of bounds
950 283
951 23-10-2015, MK, tag emdna-V10-01-40 284 23-10-2015, MK, tag emdna-V10-01-40
952 * remove all CLHEP::shared_ptr usage 285 * remove all CLHEP::shared_ptr usage
953 << 286
954 23-10-2015, CV, SM, tag emdna-V10-01-39 287 23-10-2015, CV, SM, tag emdna-V10-01-39
955 * Addded base class G4VDNAPTBModel << 288 * Addded base class G4VDNAPTBModel
956 289
957 28-09-2015, SI, tag emdna-V10-01-38 290 28-09-2015, SI, tag emdna-V10-01-38
958 * updated ion selection in G4DNARuddIonisation 291 * updated ion selection in G4DNARuddIonisationExtendedModel.cc for Z>2
959 292
960 19-09-2015, MK, tag emdna-V10-01-37 293 19-09-2015, MK, tag emdna-V10-01-37
961 * added proton ionisation scaling in G4DNABorn 294 * added proton ionisation scaling in G4DNABornIonisationModel1*.cc
962 * changed ion selection in G4DNARuddIonisation 295 * changed ion selection in G4DNARuddIonisationExtendedModel.cc for Z>2
963 296
964 17-09-2015, MK, tag emdna-V10-01-36 297 17-09-2015, MK, tag emdna-V10-01-36
965 * G4MoleculeGun: Remove compilation warnings 298 * G4MoleculeGun: Remove compilation warnings
966 299
967 04-09-2015 MK, tag emdna-V10-01-35 300 04-09-2015 MK, tag emdna-V10-01-35
968 * Fix G4MoleculeGun compilation errors 301 * Fix G4MoleculeGun compilation errors
969 302
970 03-09-2015 SI, tag emdna-V10-01-34 303 03-09-2015 SI, tag emdna-V10-01-34
971 * Added stationary regime to all inelastic mod 304 * Added stationary regime to all inelastic models
972 305
973 19-08-2015, MK 306 19-08-2015, MK
974 * Update G4MoleculeGun & G4MoleculeGunMessenge 307 * Update G4MoleculeGun & G4MoleculeGunMessenger:
975 - compatible with both Smoluchowski & Gilles 308 - compatible with both Smoluchowski & Gillespie models
976 309
977 15-08-2015, S.Incerti, tag emdna-V10-01-33 310 15-08-2015, S.Incerti, tag emdna-V10-01-33
978 * Added easier handling of cumulative proba. i 311 * Added easier handling of cumulative proba. in SR elastic models
979 312
980 13-08-2015, G.Cosmo, tag emdna-V10-01-32, 31 313 13-08-2015, G.Cosmo, tag emdna-V10-01-32, 31
981 * Fixed compilation warning on clang for misma 314 * Fixed compilation warning on clang for mismatch class/struct in
982 declaration of G4MoleculeShoot. 315 declaration of G4MoleculeShoot.
983 316
984 13-08-2015, G.Cosmo, tag emdna-V10-01-30 317 13-08-2015, G.Cosmo, tag emdna-V10-01-30
985 * Fixed compilation warning on clang for misma 318 * Fixed compilation warning on clang for mismatch class/struct in
986 declaration of G4MoleculeShootMessenger. 319 declaration of G4MoleculeShootMessenger.
987 320
988 12-08-2015, MK, tag emdna-V10-01-29 321 12-08-2015, MK, tag emdna-V10-01-29
989 * Add G4Serialize in the build tree temporaril 322 * Add G4Serialize in the build tree temporarily
990 323
991 12-08-2015, MK, tag emdna-V10-01-28 324 12-08-2015, MK, tag emdna-V10-01-28
992 * G4Serialize added 325 * G4Serialize added
993 326
994 12-08-2015, MK 327 12-08-2015, MK
995 * G4memory : quick removal of CLHEP::shared_pt 328 * G4memory : quick removal of CLHEP::shared_ptr dependency
996 329
997 24-07-2015, MK 330 24-07-2015, MK
998 - G4MolecularReactionTable 331 - G4MolecularReactionTable
999 * Add get methods 332 * Add get methods
1000 - G4MoleculeGun, G4MoleculeGunMessenger 333 - G4MoleculeGun, G4MoleculeGunMessenger
1001 * Molecule gun : place randomly in a box 334 * Molecule gun : place randomly in a box
1002 335
1003 15-07-2015, MK 336 15-07-2015, MK
1004 - G4DNAAttachment, G4DNAChargeDecrease, G4DNA << 337 - G4DNAAttachment, G4DNAChargeDecrease, G4DNADissociation,
1005 G4DNAExcitation, G4DNAIonisation 338 G4DNAExcitation, G4DNAIonisation
1006 * processes & models initialisation again 339 * processes & models initialisation again
1007 340
1008 15-07-2015, MK, tag emdna-V10-01-26 341 15-07-2015, MK, tag emdna-V10-01-26
1009 -G4ITModelProcessor & G4ITStepProcessor: 342 -G4ITModelProcessor & G4ITStepProcessor:
1010 * add macro to prevent warnings in non-verbo 343 * add macro to prevent warnings in non-verbose mode
1011 344
1012 11-07-2015, MK, tag emdna-V10-01-25 345 11-07-2015, MK, tag emdna-V10-01-25
1013 - Add G4IosFlagsSaver.hh to sources.cmake 346 - Add G4IosFlagsSaver.hh to sources.cmake
1014 - G4IosFlagsSaver.hh add an extra line of the 347 - G4IosFlagsSaver.hh add an extra line of the end of the file
1015 348
1016 10-07-2015, MK, tag emdna-V10-01-24 349 10-07-2015, MK, tag emdna-V10-01-24
1017 - G4DNA Processes : correct setup of energy b 350 - G4DNA Processes : correct setup of energy boundaries
1018 - G4DNAElectronHoleRecombination remove verbo 351 - G4DNAElectronHoleRecombination remove verbose
1019 - G4DNADingfelderChargeDecreaseModel: add hol 352 - G4DNADingfelderChargeDecreaseModel: add hole creation
1020 - G4DNAEmfietzoglouXModel: specify energy bou 353 - G4DNAEmfietzoglouXModel: specify energy boundaries in constructor
1021 354
1022 08-07-2015, MK, tag emdna-V10-01-23 355 08-07-2015, MK, tag emdna-V10-01-23
1023 - G4ITLeadingTracks added 356 - G4ITLeadingTracks added
1024 - G4ITSteppingVerbose added 357 - G4ITSteppingVerbose added
1025 - G4IosFlagsSaver added 358 - G4IosFlagsSaver added
1026 - G4VITSteppingVerbose & G4ITSteppingVerbose << 359 - G4VITSteppingVerbose & G4ITSteppingVerbose added
1027 * new UI command /chem/tracking/verbose 1,2 << 360 * new UI command /chem/tracking/verbose 1,2,3 ...
1028 - G4MoleculeDefinition: 361 - G4MoleculeDefinition:
1029 ::SetFormatedName added 362 ::SetFormatedName added
1030 ::NewConfiguration methods added 363 ::NewConfiguration methods added
1031 ::NewConfiguration added 364 ::NewConfiguration added
1032 ::AddDecayChannel per G4MolecularConfigurat 365 ::AddDecayChannel per G4MolecularConfiguration or conf label added
1033 And replace ::AddDecayChannel for a molecul 366 And replace ::AddDecayChannel for a molecule model
1034 ::Finalize added 367 ::Finalize added
1035 - G4MolecularConfiguration: << 368 - G4MolecularConfiguration:
1036 * new configuration can be defined by label 369 * new configuration can be defined by labels
1037 * Add Finalize method and add exception if 370 * Add Finalize method and add exception if attempt to modified
1038 the G4MolecularConfiguration is done after 371 the G4MolecularConfiguration is done after finalization
1039 - G4MolecularDissociationChannel & G4DNAMolec << 372 - G4MolecularDissociationChannel & G4DNAMolecularReactionTable &
1040 G4DNAMolecularEncounterStepper use G4Molecula << 373 G4DNAMolecularEncounterStepper use G4MolecularConfiguration rather
1041 than molecule models 374 than molecule models
1042 - G4Molecule add constructor where only G4Mol 375 - G4Molecule add constructor where only G4MolecularConfiguration is specified
1043 - G4Scheduler : remove entirely track specifi 376 - G4Scheduler : remove entirely track specification from this class
1044 - G4ITXProcess : deal with tracks 377 - G4ITXProcess : deal with tracks
1045 - G4ITTrackingManager is a "service" to start 378 - G4ITTrackingManager is a "service" to start and end tracking
1046 - G4DNAElectronHoleRecombination added 379 - G4DNAElectronHoleRecombination added
1047 380
1048 06-07-2015, Shogo Okada, SI, tag emdna-V10-01 381 06-07-2015, Shogo Okada, SI, tag emdna-V10-01-22
1049 - G4DNAEmfietzoglouIonisationModel: removed c << 382 - G4DNAEmfietzoglouIonisationModel: removed condition for
1050 fasterCode usage on shell selection. 383 fasterCode usage on shell selection.
1051 384
1052 26-06-2015, MK 385 26-06-2015, MK
1053 - G4DNAIonElasticModel: modify "validated" to << 386 - G4DNAIonElasticModel: modify "validated" to "activated" in
1054 warning message description 387 warning message description
1055 388
1056 16-06-205, MK 389 16-06-205, MK
1057 - Add G4Scheduler::GetGun() 390 - Add G4Scheduler::GetGun()
1058 391
1059 16-06-2015, MK, tag emdna-V10-01-21 392 16-06-2015, MK, tag emdna-V10-01-21
1060 - G4DNAElastic.cc : add elseif(name == ... 393 - G4DNAElastic.cc : add elseif(name == ...
1061 - G4DNAIonElasticModel: clean and fix double 394 - G4DNAIonElasticModel: clean and fix double free
1062 395
1063 12-06-2015, MK, tag emdna-V10-01-20 396 12-06-2015, MK, tag emdna-V10-01-20
1064 - remove virtual keyword from G4IT::GetPositi 397 - remove virtual keyword from G4IT::GetPosition()
1065 398
1066 04-06-2015, MK 399 04-06-2015, MK
1067 - just cosmetics 400 - just cosmetics
1068 - remove virtual keyword from G4IT::operator[ 401 - remove virtual keyword from G4IT::operator[]
1069 402
1070 26-05-2015, Robert Hatcher, tag emdna-V10-01- 403 26-05-2015, Robert Hatcher, tag emdna-V10-01-19
1071 - Remove unnecessary "using namespace std" fr 404 - Remove unnecessary "using namespace std" from various headers
1072 that causes problems w/ G4AnyMethod & G4Gen 405 that causes problems w/ G4AnyMethod & G4GenericPhysicsList
1073 when using clang and/or vc12 406 when using clang and/or vc12
1074 - Fully qualify std::string elsewhere as need 407 - Fully qualify std::string elsewhere as needed to adjust
1075 408
1076 22-05-2015, John Allison, tag emdna-V10-01-18 409 22-05-2015, John Allison, tag emdna-V10-01-18
1077 - G4ITTrackHolder.cc: Replaced "G4Threading:: 410 - G4ITTrackHolder.cc: Replaced "G4Threading::IsWorkerThread() == false" by
1078 "G4Threading::IsMasterThread()". 411 "G4Threading::IsMasterThread()".
1079 412
1080 17-05-2015, MK, tag emdna-V10-01-17 413 17-05-2015, MK, tag emdna-V10-01-17
1081 - G4DNABornIonisationModel1/2 & G4DNABornExci 414 - G4DNABornIonisationModel1/2 & G4DNABornExcitationModel2: remove unused variables
1082 - Correct sources.cmake 415 - Correct sources.cmake
1083 - Born headears: includes both model versions << 416 - Born headears: includes both model versions when proxy header is included
1084 417
1085 16-05-2015, MK, tag emdna-V10-01-16 418 16-05-2015, MK, tag emdna-V10-01-16
1086 - Add G4DNAEmfietzoglouExcitationModel 419 - Add G4DNAEmfietzoglouExcitationModel
1087 - Add G4DNAEmfietzoglouIonisationModel 420 - Add G4DNAEmfietzoglouIonisationModel
1088 - Add G4DNAUeharaScreenedRutherfordElasticMod 421 - Add G4DNAUeharaScreenedRutherfordElasticModel
1089 - Add G4DNABornIonisationModel2 (temporary) 422 - Add G4DNABornIonisationModel2 (temporary)
1090 - Add G4DNABornExcitationModel2 (temporary) 423 - Add G4DNABornExcitationModel2 (temporary)
1091 424
1092 15-05-2015, MK, tag emdna-V10-01-15 425 15-05-2015, MK, tag emdna-V10-01-15
1093 - Postpone G4DNASmoluchowskiDiffusion until c 426 - Postpone G4DNASmoluchowskiDiffusion until c++11 is adopted
1094 427
1095 14-05-2015, MK, tag emdna-V10-01-14 428 14-05-2015, MK, tag emdna-V10-01-14
1096 - G4DNASmoluchowskiDiffusion: std::sqrt -> sq 429 - G4DNASmoluchowskiDiffusion: std::sqrt -> sqrt
1097 430
1098 14-05-2015, MK, tag emdna-V10-01-13 431 14-05-2015, MK, tag emdna-V10-01-13
1099 - G4DNASmoluchowskiDiffusion: try to solve co 432 - G4DNASmoluchowskiDiffusion: try to solve compilation error
1100 - G4ITReaction: try to solve compilation erro 433 - G4ITReaction: try to solve compilation error
1101 434
1102 12-05-2015, MK, tag emdna-V10-01-12 435 12-05-2015, MK, tag emdna-V10-01-12
1103 - G4DNASmoluchowskiDiffusion: try to solve co 436 - G4DNASmoluchowskiDiffusion: try to solve compilation error
1104 437
1105 12-05-2015, MK, tag emdna-V10-01-11 438 12-05-2015, MK, tag emdna-V10-01-11
1106 - Add G4DNASmoluchowskiDiffusion to the build 439 - Add G4DNASmoluchowskiDiffusion to the build tree
1107 440
1108 11-05-2015, MK, tag emdna-V10-01-10 441 11-05-2015, MK, tag emdna-V10-01-10
1109 - G4DNABornExcitationModel: 442 - G4DNABornExcitationModel:
1110 +Add GetPartialCrossSection 443 +Add GetPartialCrossSection
1111 +Code cleaning 444 +Code cleaning
1112 - G4DNAMillerGreenExcitationModel: 445 - G4DNAMillerGreenExcitationModel:
1113 +Add GetPartialCrossSection 446 +Add GetPartialCrossSection
1114 - G4DNAChemistryManager::GetValue(...) added 447 - G4DNAChemistryManager::GetValue(...) added
1115 448
1116 02-05-2015, MK 449 02-05-2015, MK
1117 - Update G4TrackState & related classes 450 - Update G4TrackState & related classes
1118 - G4DNABrownianTransportation: << 451 - G4DNABrownianTransportation:
1119 +Add constructor & destructor to G4Brownian << 452 +Add constructor & destructor to G4BrownianAction
1120 +comment useless method 453 +comment useless method
1121 - G4Scheduler: << 454 - G4Scheduler:
1122 +Add fStopTime+Watched times+PrintWhyDoYouS << 455 +Add fStopTime+Watched times+PrintWhyDoYouStop method (code was existing before)
1123 +remove fTmpEndTime << 456 +remove fTmpEndTime
1124 +Add CanICarryOn 457 +Add CanICarryOn
1125 - add G4DNASmoluchowskiDiffusion *PRELIMINARY 458 - add G4DNASmoluchowskiDiffusion *PRELIMINARY*
1126 459
1127 18-03-2015, MK, tag emdna-V10-01-08 460 18-03-2015, MK, tag emdna-V10-01-08
1128 - Same as before, just add the missing Histor 461 - Same as before, just add the missing History file
1129 462
1130 18-03-2015, MK, tag emdna-V10-01-07 463 18-03-2015, MK, tag emdna-V10-01-07
1131 - G4UserTimeStepAction::UserReactionAction : 464 - G4UserTimeStepAction::UserReactionAction : vector of products becomes a pointer
1132 instead of a reference 465 instead of a reference
1133 466
1134 12-02-2015, MK, tag emdna-V10-01-06 467 12-02-2015, MK, tag emdna-V10-01-06
1135 - G4ITReaction: Remove "gAll" introduced for 468 - G4ITReaction: Remove "gAll" introduced for testing
1136 - G4ITModelProcessor: Remove "assert" introdu 469 - G4ITModelProcessor: Remove "assert" introduced for testing
1137 - G4ITTransportation: Remove extra parenthesi << 470 - G4ITTransportation: Remove extra parenthesis in the undef of PrepareState
1138 471
1139 11-02-2015, MK, tag emdna-V10-01-05 472 11-02-2015, MK, tag emdna-V10-01-05
1140 - Fix reproductibility of the chemistry modul 473 - Fix reproductibility of the chemistry module
1141 - Fix the "no reaction table found" bug: G4IT 474 - Fix the "no reaction table found" bug: G4ITReaction class created
1142 - G4shared_ptr refers to std::shared_ptr when 475 - G4shared_ptr refers to std::shared_ptr when C++11 is activated
1143 476
1144 16-01-2015, SI, tag emdna-V10-01-04 477 16-01-2015, SI, tag emdna-V10-01-04
1145 - added Fe56 into G4DNARuddIonisationExtended 478 - added Fe56 into G4DNARuddIonisationExtendedModel
1146 479
1147 14-12-2014, MK, tag emdna-V10-01-03 480 14-12-2014, MK, tag emdna-V10-01-03
1148 - BornIonisation: correct array cleaning 481 - BornIonisation: correct array cleaning
1149 - ScreenRutherfordElastic: correct retrieval << 482 - ScreenRutherfordElastic: correct retrieval of water density
1150 483
1151 13-12-2014, SI, tag emdna-V10-01-02 484 13-12-2014, SI, tag emdna-V10-01-02
1152 - Added elastic model by H. Tran. 485 - Added elastic model by H. Tran.
1153 486
1154 12-12-2014, G.Cosmo, tag emdna-V10-01-01 487 12-12-2014, G.Cosmo, tag emdna-V10-01-01
1155 - Explicitly initialise to zero TLS pointers 488 - Explicitly initialise to zero TLS pointers in G4KDNode.hh and G4ITFinder.icc
1156 to allow for compilation on Linux/clang-3.5 489 to allow for compilation on Linux/clang-3.5.
1157 490
1158 05-12-2014, G.Cosmo, tag emdna-V10-01-00 491 05-12-2014, G.Cosmo, tag emdna-V10-01-00
1159 - Corrected sources.cmake in management and m 492 - Corrected sources.cmake in management and molecules/management, to
1160 include missing files: 493 include missing files:
1161 G4ITTransportationManager.icc 494 G4ITTransportationManager.icc
1162 G4KDNode.icc 495 G4KDNode.icc
1163 G4KDTree.icc 496 G4KDTree.icc
1164 G4MoleculeFinder.hh 497 G4MoleculeFinder.hh
1165 498
1166 01-12-2014, MK, tag emdna-V10-00-63 499 01-12-2014, MK, tag emdna-V10-00-63
1167 - Temporary fix for avoiding bad relocation o 500 - Temporary fix for avoiding bad relocation of Brownian particles
1168 It slows the computation by forcing the Brown 501 It slows the computation by forcing the Brownian particles to stop at the volumes' boundaries
1169 - Transform fStopAndAlive to fStopAndKill in 502 - Transform fStopAndAlive to fStopAndKill in G4DNABrownianTransportation
1170 when the particle has reached a boundary 503 when the particle has reached a boundary
1171 504
1172 28-11-2014, MK, tag emdna-V10-00-62 505 28-11-2014, MK, tag emdna-V10-00-62
1173 - Retag 506 - Retag
1174 507
1175 28-11-2014, MK, tag emdna-V10-00-61 508 28-11-2014, MK, tag emdna-V10-00-61
1176 - Fix chemistry initialization in standalone 509 - Fix chemistry initialization in standalone
1177 - Fix Brownian navigation 510 - Fix Brownian navigation
1178 - Some fixes related to scheduler 511 - Some fixes related to scheduler
1179 - Rename macro commands to reflect usage of s 512 - Rename macro commands to reflect usage of scheduler
1180 - Enhance comments 513 - Enhance comments
1181 514
1182 24-11-2014, MK, tag emdna-V10-00-60 515 24-11-2014, MK, tag emdna-V10-00-60
1183 - Remove a useless but also fatal (when chemi 516 - Remove a useless but also fatal (when chemistry is not activated) exception
1184 517
1185 24-11-2014, MK, tag emdna-V10-00-59 518 24-11-2014, MK, tag emdna-V10-00-59
1186 - Enhance doxygen comments in G4DNABrownianTr 519 - Enhance doxygen comments in G4DNABrownianTransportation
1187 - Remove useless verbose 520 - Remove useless verbose
1188 - Try to compile on all platforms 521 - Try to compile on all platforms
1189 - Correct initialization of G4DNAChemistryMan 522 - Correct initialization of G4DNAChemistryManager
1190 - Simplify initialization of chemistry from u 523 - Simplify initialization of chemistry from user applications
1191 Just registering constructor is enough to i 524 Just registering constructor is enough to initialized the chemistry
1192 525
1193 24-11-2014, MK, tag emdna-V10-00-58 526 24-11-2014, MK, tag emdna-V10-00-58
1194 - G4FastList: remove all friend declarations 527 - G4FastList: remove all friend declarations
1195 528
1196 22-11-2014, MK, tag emdna-V10-00-57 529 22-11-2014, MK, tag emdna-V10-00-57
1197 - Another attempt to compile G4FastList on al 530 - Another attempt to compile G4FastList on all platforms
1198 531
1199 22-11-2014, MK, tag emdna-V10-00-56 532 22-11-2014, MK, tag emdna-V10-00-56
1200 - Attempt to compile G4FastList on all platfo 533 - Attempt to compile G4FastList on all platforms
1201 534
1202 21-11-2014, MK, tag emdna-V10-00-55 535 21-11-2014, MK, tag emdna-V10-00-55
1203 - Attempt to compile G4FastList with clang 536 - Attempt to compile G4FastList with clang
1204 537
1205 21-11-2014, MK, tag emdna-V10-00-54 538 21-11-2014, MK, tag emdna-V10-00-54
1206 - Put back G4DNABrownianTransportation::fUseM 539 - Put back G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary
1207 to true as long as the small distances to bou << 540 to true as long as the small distances to boundaries sent back by the navigator
1208 are not understood 541 are not understood
1209 - Update G4ITNavigator2 to the G4Navigator of 542 - Update G4ITNavigator2 to the G4Navigator of John
1210 543
1211 21-11-2014, MK, tag emdna-V10-00-53 544 21-11-2014, MK, tag emdna-V10-00-53
1212 - Attempt to solve the 'No track found' bug b << 545 - Attempt to solve the 'No track found' bug by using G4FastList and
1213 G4ManyFastLists - A 'list watcher' is added 546 G4ManyFastLists - A 'list watcher' is added
1214 - G4DNABrownianTransportation::fUseMaximumTim 547 - G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary
1215 is false by default --> uses the random time << 548 is false by default --> uses the random time computation for crossing
1216 boundaries 549 boundaries
1217 550
1218 20-11-2014, SI, tag emdna-V10-00-52 551 20-11-2014, SI, tag emdna-V10-00-52
1219 - Improved error message for missing data in 552 - Improved error message for missing data in PW elastic model
1220 553
1221 08-11-2014, MK, tag emdna-V10-00-51 554 08-11-2014, MK, tag emdna-V10-00-51
1222 - Add an exception in G4MoleculeTable::GetMod 555 - Add an exception in G4MoleculeTable::GetModel/GetDefinition
1223 when the asked item is not found 556 when the asked item is not found
1224 557
1225 03-11-2014 MK, tag emdna-V10-00-50 558 03-11-2014 MK, tag emdna-V10-00-50
1226 - correct track creation by G4MoleculeGunMess 559 - correct track creation by G4MoleculeGunMessenger
1227 560
1228 03-11-2014 MK, tag emdna-V10-00-49 561 03-11-2014 MK, tag emdna-V10-00-49
1229 - Remove useless classes 562 - Remove useless classes
1230 - Correct a bug in G4MoleculeGun 563 - Correct a bug in G4MoleculeGun
1231 564
1232 28-10-2014 PA, tag emdna-V10-00-48 565 28-10-2014 PA, tag emdna-V10-00-48
1233 - correct compilation warnings 566 - correct compilation warnings
1234 567
1235 28-10-2014 PA, tag emdna-V10-00-47 568 28-10-2014 PA, tag emdna-V10-00-47
1236 - correct compilation warnings 569 - correct compilation warnings
1237 570
1238 28-10-2014 PA, tag emdna-V10-00-46 571 28-10-2014 PA, tag emdna-V10-00-46
1239 - correction in sources.cmake 572 - correction in sources.cmake
1240 573
1241 28-10-2014 PA, tag emdna-V10-00-45 574 28-10-2014 PA, tag emdna-V10-00-45
1242 - retag to add LEPTS 575 - retag to add LEPTS
1243 576
1244 28-10-2014 PA, tag emdna-V10-00-44 577 28-10-2014 PA, tag emdna-V10-00-44
1245 - add LEPTS 578 - add LEPTS
1246 579
1247 25-10-2014 MK, tag emdna-V10-00-43 580 25-10-2014 MK, tag emdna-V10-00-43
1248 - remove useless G4VITScheduler 581 - remove useless G4VITScheduler
1249 582
1250 25-10-2014 MK, tag emdna-V10-00-42 583 25-10-2014 MK, tag emdna-V10-00-42
1251 - correct warnings 584 - correct warnings
1252 585
1253 24-10-2014 MK, tag emdna-V10-00-41 586 24-10-2014 MK, tag emdna-V10-00-41
1254 - G4ITTimeStepper-->G4VScheduler 587 - G4ITTimeStepper-->G4VScheduler
1255 - G4ITStepManager-->G4ITScheduler 588 - G4ITStepManager-->G4ITScheduler
1256 - G4ITStepManager-->G4ITSchedulerMessenger 589 - G4ITStepManager-->G4ITSchedulerMessenger
1257 - G4AllITManager & G4ITManager deleted 590 - G4AllITManager & G4ITManager deleted
1258 - G4ITFinder added 591 - G4ITFinder added
1259 - G4VITTrackHolder added 592 - G4VITTrackHolder added
1260 - G4ITTrackHolder implemented 593 - G4ITTrackHolder implemented
1261 - code cleaned + useless classes removed 594 - code cleaned + useless classes removed
1262 595
1263 24-10-2014 MK, tag emdna-V10-00-40 596 24-10-2014 MK, tag emdna-V10-00-40
1264 - G4ITStepManager: remove verbose at closure 597 - G4ITStepManager: remove verbose at closure time
1265 598
1266 21-10-2014 MK, tag emdna-V10-00-39 599 21-10-2014 MK, tag emdna-V10-00-39
1267 - try to solve crash at closure time 600 - try to solve crash at closure time
1268 601
1269 21-10-2014 MK, tag emdna-V10-00-38 602 21-10-2014 MK, tag emdna-V10-00-38
1270 - remove G4MolecularConfiguration from the ma 603 - remove G4MolecularConfiguration from the manager's
1271 table when deleted 604 table when deleted
1272 - update disclaimer 605 - update disclaimer
1273 606
1274 17-10-2014 MK, tag emdna-V10-00-37 607 17-10-2014 MK, tag emdna-V10-00-37
1275 - clean code 608 - clean code
1276 - G4ITStepManager: one can ask why simulation 609 - G4ITStepManager: one can ask why simulation stops
1277 - remove useless verbose 610 - remove useless verbose
1278 611
1279 17-10-2014 MK, tag emdna-V10-00-36 612 17-10-2014 MK, tag emdna-V10-00-36
1280 - Call G4ITTimeStepper in ChemMan::InitMaster 613 - Call G4ITTimeStepper in ChemMan::InitMaster
1281 - Remove inappropriate method in G4ITTrackHol 614 - Remove inappropriate method in G4ITTrackHolder
1282 - G4DNASecondOrderReaction uses G4ITTimeStepp 615 - G4DNASecondOrderReaction uses G4ITTimeStepper::GetTimeStep
1283 616
1284 10-10-2014 MK, tag emdna-V10-00-35 617 10-10-2014 MK, tag emdna-V10-00-35
1285 Avoid use of std::map at the applicatio 618 Avoid use of std::map at the application level in TimeStepAction
1286 619
1287 07-10-2014 MK, tag emdna-V10-00-34 620 07-10-2014 MK, tag emdna-V10-00-34
1288 G4MolecularReactionTable : translate fr 621 G4MolecularReactionTable : translate from french to english
1289 G4DNAChemistryManager : remove usage of 622 G4DNAChemistryManager : remove usage of G4ITStepManager
1290 G4ITTimeStepper : use temporally as int 623 G4ITTimeStepper : use temporally as interface to G4ITStepManager
1291 624
1292 07-10-2014 MK, tag emdna-V10-00-33 625 07-10-2014 MK, tag emdna-V10-00-33
1293 Initialize G4ITStepManager in G4DNAChem 626 Initialize G4ITStepManager in G4DNAChemistryManager
1294 627
1295 17-09-2014 MK, tag emdna-V10-00-32 628 17-09-2014 MK, tag emdna-V10-00-32
1296 Add G4ITStepManager + messenger 629 Add G4ITStepManager + messenger
1297 Tag before architecture change 630 Tag before architecture change
1298 631
1299 12-07-2014 SI, tag emdna-V10-00-31 632 12-07-2014 SI, tag emdna-V10-00-31
1300 Removed obsolete class for electr 633 Removed obsolete class for electron excitation
1301 634
1302 27-06-2014 GCosmo, tag emdna-V10-00-30 635 27-06-2014 GCosmo, tag emdna-V10-00-30
1303 - Get rid of obsolete 'register' keywor 636 - Get rid of obsolete 'register' keyword in code.
1304 637
1305 05-06-2014 SI, tag emdna-V10-00-29 638 05-06-2014 SI, tag emdna-V10-00-29
1306 - added include of <deque> in G4DNAMill 639 - added include of <deque> in G4DNAMillerGreenExcitationModel.hh
1307 - updated G4DNAIonisation and G4D << 640 - updated G4DNAIonisation and G4DNARuddIonisationExtendModel for
1308 G4GenericIon usage 641 G4GenericIon usage
1309 - requires G4EMLOW6.39 642 - requires G4EMLOW6.39
1310 643
1311 04-06-2014 MK, tag emdna-V10-00-28 644 04-06-2014 MK, tag emdna-V10-00-28
1312 Remove directory management/include/imp 645 Remove directory management/include/impl
1313 Prepare for release 646 Prepare for release
1314 647
1315 04-06-2014 MK, tag emdna-V10-00-27 648 04-06-2014 MK, tag emdna-V10-00-27
1316 Resolve several defects pointed o 649 Resolve several defects pointed out by coverity
1317 Add interface G4ITTimeStepper 650 Add interface G4ITTimeStepper
1318 Avoid usage of molecule iterators 651 Avoid usage of molecule iterators as pointers
1319 652
1320 03-06-2014 SI, tag emdna-V10-00-26 653 03-06-2014 SI, tag emdna-V10-00-26
1321 Switched to DNAion for Si in 654 Switched to DNAion for Si in G4DNAGenericIonsManager
1322 655
1323 28-05-2014 VI, SI tag emdna-V10-00-25 656 28-05-2014 VI, SI tag emdna-V10-00-25
1324 Added G4DNABornAngle and G4DN 657 Added G4DNABornAngle and G4DNARuddAngle generators;
1325 Ionisation models switch to u 658 Ionisation models switch to use angular generator
1326 interface 659 interface
1327 660
1328 12.05.2014 MK, tag emdna-V10-00-24 661 12.05.2014 MK, tag emdna-V10-00-24
1329 Try to remove warnings 4 662 Try to remove warnings 4
1330 663
1331 12.05.2014 MK, tag emdna-V10-00-23 664 12.05.2014 MK, tag emdna-V10-00-23
1332 Try to remove warnings 3 665 Try to remove warnings 3
1333 666
1334 12.05.2014 MK, tag emdna-V10-00-22 667 12.05.2014 MK, tag emdna-V10-00-22
1335 Try to remove warnings 2 668 Try to remove warnings 2
1336 669
1337 12.05.2014 MK, tag emdna-V10-00-21 670 12.05.2014 MK, tag emdna-V10-00-21
1338 Try to remove warnings 671 Try to remove warnings
1339 672
1340 09.05.2014 S. Incerti, tag emdna-V10-00-20 673 09.05.2014 S. Incerti, tag emdna-V10-00-20
1341 Added Si to G4DNARuddIonisationEx << 674 Added Si to G4DNARuddIonisationExtendedModel
1342 on behalf of Z. Francis 675 on behalf of Z. Francis
1343 G4EMLOW6.38 needed 676 G4EMLOW6.38 needed
1344 677
1345 07-04-2014 SI tag emdna-V10-00-19 678 07-04-2014 SI tag emdna-V10-00-19
1346 Changed faster method interpolation in 679 Changed faster method interpolation in
1347 G4DNABornIonisationModel << 680 G4DNABornIonisationModel
1348 681
1349 04-04-2014 G.Cosmo tag emdna-V10-00-1 682 04-04-2014 G.Cosmo tag emdna-V10-00-18
1350 Removed problematic #define in G4TrackS 683 Removed problematic #define in G4TrackState.hh causing errors on
1351 Windows for overriding of system keywor 684 Windows for overriding of system keyword 'Handle'...
1352 Corrected order of inclusion of some he 685 Corrected order of inclusion of some headers and use of <>/"".
1353 686
1354 04-04-2014 MK tag emdna-V10-00-17 687 04-04-2014 MK tag emdna-V10-00-17
1355 Try to solve warnings when G4VERBOSE is 688 Try to solve warnings when G4VERBOSE is off
1356 689
1357 02-04-2014 MK tag emdna-V10 690 02-04-2014 MK tag emdna-V10-00-16
1358 G4ITSafetyHelper: Force usage of G4Path 691 G4ITSafetyHelper: Force usage of G4PathFinder for now
1359 692
1360 02-04-2014 MK tag emdna-V10 693 02-04-2014 MK tag emdna-V10-00-15
1361 Add preprocessor flags on files in dev 694 Add preprocessor flags on files in dev to prevent build errors with gmake
1362 695
1363 02-04-2014 MK tag emdna-V10 696 02-04-2014 MK tag emdna-V10-00-14
1364 - on mac: template parameter declared a 697 - on mac: template parameter declared as a friend class is supported only with c++11 which causes a warning
1365 -> this part is withdrawn for now 698 -> this part is withdrawn for now
1366 699
1367 02-04-2014 MK tag emdna-V10 700 02-04-2014 MK tag emdna-V10-00-13
1368 - version 2 : try fixing the build erro 701 - version 2 : try fixing the build error on mac
1369 702
1370 02-04-2014 MK tag emdna-V10 703 02-04-2014 MK tag emdna-V10-00-12
1371 - version 1 : try to fix build errors a 704 - version 1 : try to fix build errors and warnings on mac
1372 705
1373 02-04-2014 MK tag emdna-V10 706 02-04-2014 MK tag emdna-V10-00-11
1374 - try to fix build error on windows pla 707 - try to fix build error on windows platform - 3
1375 (G4MemStat & G4MolecularConfiguration) 708 (G4MemStat & G4MolecularConfiguration)
1376 709
1377 02-04-2014 MK tag emdna-V10 710 02-04-2014 MK tag emdna-V10-00-10
1378 - try to fix build error on windows pla 711 - try to fix build error on windows platform - 2
1379 (problem coming from having as a friend 712 (problem coming from having as a friend class a template argument)
1380 713
1381 02-04-2014 MK tag emdna-V10 714 02-04-2014 MK tag emdna-V10-00-09
1382 - try to fix build error on windows pla << 715 - try to fix build error on windows platform
1383 716
1384 01-04-2014 MK tag emdna-V10 717 01-04-2014 MK tag emdna-V10-00-08
1385 - G4DNAChemistryManager.cc: remove a G4 718 - G4DNAChemistryManager.cc: remove a G4cout in destructor causing a crash in test60
1386 - G4TrackState.hh: change 'typename' to 719 - G4TrackState.hh: change 'typename' to 'class' in template argument of typewrapper
1387 720
1388 01-04-2014 MK tag emdna-V10 721 01-04-2014 MK tag emdna-V10-00-07
1389 - reset CMakeLists.txt 722 - reset CMakeLists.txt
1390 723
1391 01-04-2014 MK tag emdna-V10 724 01-04-2014 MK tag emdna-V10-00-06
1392 - update chemistry 725 - update chemistry
1393 726
1394 01-04-2014 SI tag emdna-V10-00-05 727 01-04-2014 SI tag emdna-V10-00-05
1395 - Modified calculation of secondary kin 728 - Modified calculation of secondary kinetic for fast code
1396 729
1397 27-03-2014 G.Cosmo tag emdna-V10-00-04 730 27-03-2014 G.Cosmo tag emdna-V10-00-04
1398 - Corrected inclusion order of headers 731 - Corrected inclusion order of headers and forward declations
1399 in G4MolecularConfiguration. 732 in G4MolecularConfiguration.
1400 - Corrected typo in DLL import flag in 733 - Corrected typo in DLL import flag in G4DNAWaterDissociationDisplacer.hh.
1401 734
1402 25-03-2014 VS, SI tag emdna-V10-00-03 735 25-03-2014 VS, SI tag emdna-V10-00-03
1403 - Added several clear() to vectors for 736 - Added several clear() to vectors for MT
1404 737
1405 17-03-2014 SI tag emdna-V10-00-02 738 17-03-2014 SI tag emdna-V10-00-02
1406 - Modified G4DNAChampionElasticModel.cc << 739 - Modified G4DNAChampionElasticModel.cc to read
1407 high precision diff. cumulated 740 high precision diff. cumulated cross section
1408 to be used with G4EMLOW6.36 741 to be used with G4EMLOW6.36
1409 742
1410 12-12-2013 M.K tag emdna-V10-00-01 743 12-12-2013 M.K tag emdna-V10-00-01
1411 - G4DNAMolecularMaterial: Remove unused 744 - G4DNAMolecularMaterial: Remove unused variable
1412 745
1413 12-12-2013 M.K tag emdna-V10-00-00 746 12-12-2013 M.K tag emdna-V10-00-00
1414 - G4DNAMolecularMaterial is modified to << 747 - G4DNAMolecularMaterial is modified to prevent segmentation fault in case
1415 a model is not created at initialisatio 748 a model is not created at initialisation time
1416 749
1417 21-11-2013 V.I. tag emdna-V09-06-22 750 21-11-2013 V.I. tag emdna-V09-06-22
1418 - G4ITStepProcessor2 - removed ob 751 - G4ITStepProcessor2 - removed obsolete unused header
1419 752
1420 01-11-2013 M.K tag emdna-V09-06-21 753 01-11-2013 M.K tag emdna-V09-06-21
1421 - Correct incorrect singleton che 754 - Correct incorrect singleton check introduced in previous tag
1422 755
1423 01-11-2013 M.K tag emdna-V09-06-20 756 01-11-2013 M.K tag emdna-V09-06-20
1424 - Prepare for release bis 757 - Prepare for release bis
1425 758
1426 01-11-2013 M.K tag emdna-V09-06-19 759 01-11-2013 M.K tag emdna-V09-06-19
1427 - Prepare for release 760 - Prepare for release
1428 761
1429 10-10-2013 M.K. tag emdna-V09-06-18 762 10-10-2013 M.K. tag emdna-V09-06-18
1430 - Remove G4VERBOSE testing in G4D 763 - Remove G4VERBOSE testing in G4DNABrownianTransportation::BuildPhysicsTable
1431 764
1432 06-10-2013 M.K. tag emdna-V09-06-17 765 06-10-2013 M.K. tag emdna-V09-06-17
1433 - Same as before once again 766 - Same as before once again
1434 767
1435 03-10-2013 M.K. tag emdna-V09-06-16 768 03-10-2013 M.K. tag emdna-V09-06-16
1436 - Same as before 769 - Same as before
1437 770
1438 03-10-2013 M.K. tag emdna-V09-06-15 771 03-10-2013 M.K. tag emdna-V09-06-15
1439 - Improve MT compatibility 772 - Improve MT compatibility
1440 - Enhance G4DNAChemistryManager to be t << 773 - Enhance G4DNAChemistryManager to be the main interface used
1441 by the user - stage 1 774 by the user - stage 1
1442 775
1443 14-09-2013 M.Asai tag emdna-V09-06-14 776 14-09-2013 M.Asai tag emdna-V09-06-14
1444 G4VProcess::SubtractNumberOfInter 777 G4VProcess::SubtractNumberOfInteractionLengthLeft() is no longer
1445 a virtual methood since v9.6 and 778 a virtual methood since v9.6 and thus it must not be overwritten
1446 with virtual keyword in G4VITProc 779 with virtual keyword in G4VITProcess.
1447 780
1448 12-09-2013 M.K. tag emdna-V09-06-13 781 12-09-2013 M.K. tag emdna-V09-06-13
1449 Correction of an inadvertent modificati 782 Correction of an inadvertent modification introduced in previous tag
1450 783
1451 12-09-2013 M.K. tag emdna-V09-06-12 784 12-09-2013 M.K. tag emdna-V09-06-12
1452 Correct bound checks in G4ITManager.icc 785 Correct bound checks in G4ITManager.icc
1453 786
1454 16-08-2013 S.I. tag emdna-V09-06-11 787 16-08-2013 S.I. tag emdna-V09-06-11
1455 Adapted G4DNAGenericIonsManager to use 788 Adapted G4DNAGenericIonsManager to use of G4DNAIons
1456 789
1457 16-08-2013 S.I. tag emdna-V09-06-10 790 16-08-2013 S.I. tag emdna-V09-06-10
1458 Added G4DNAIons 791 Added G4DNAIons
1459 792
1460 25-06-2013 M.K. tag emdna-V09-06-09 793 25-06-2013 M.K. tag emdna-V09-06-09
1461 G4MoleculeID: Rectify initialization 794 G4MoleculeID: Rectify initialization
1462 G4MoleculeCounter: Automatic switch bet << 795 G4MoleculeCounter: Automatic switch between unique_ptr or
1463 auto_ptr according to c++ std version 796 auto_ptr according to c++ std version
1464 797
1465 11-06-2013 G.Cosmo tag emdna-V09-06- 798 11-06-2013 G.Cosmo tag emdna-V09-06-08
1466 Corrected static initialisation i 799 Corrected static initialisation in G4VMolecularDecayDisplacer
1467 for problem accidentally introduc 800 for problem accidentally introduced in previous tag.
1468 801
1469 11-06-2013 G.Cosmo tag emdna-V09-06- 802 11-06-2013 G.Cosmo tag emdna-V09-06-07
1470 Cleanup from automatic changes fo 803 Cleanup from automatic changes for MT in classes G4Molecule,
1471 G4VMolecularDecayDisplacer, G4IT, 804 G4VMolecularDecayDisplacer, G4IT, G4ITModelProcessor, G4VITProcess,
1472 G4ITTransportation, G4DNAChemistr 805 G4ITTransportation, G4DNAChemistryManager, and porting MT
1473 compilation on Windows. 806 compilation on Windows.
1474 807
1475 06-06-2013 S.I. tag emdna-V09-06- 808 06-06-2013 S.I. tag emdna-V09-06-06
1476 Updated G4DNABornIonisationModel 809 Updated G4DNABornIonisationModel for speedup option
1477 Requires G4EMLOW version 6.33 810 Requires G4EMLOW version 6.33
1478 811
1479 25-05-2013 M.K. tag emdna-V09-06- 812 25-05-2013 M.K. tag emdna-V09-06-05
1480 *Fix warning compilation in G4KDM 813 *Fix warning compilation in G4KDMap for specific gcc version
1481 814
1482 24-05-2013 M.K. tag emdna-V09-06- 815 24-05-2013 M.K. tag emdna-V09-06-04
1483 * Track state class updated to fi << 816 * Track state class updated to fix compilation errors on mac
1484 but still not in usage 817 but still not in usage
1485 818
1486 23-05-2013 M.K. tag emdna-V09-06- 819 23-05-2013 M.K. tag emdna-V09-06-03
1487 * G4KDMap : try fix error on std: 820 * G4KDMap : try fix error on std:ceil call on windows
1488 821
1489 23-V09-06-03-05-2013 M.K. tag emd 822 23-V09-06-03-05-2013 M.K. tag emdna-V09-06-02
1490 * G4KDMap : used deque::iterator 823 * G4KDMap : used deque::iterator
1491 824
1492 825
1493 22-05-2013 M.K. tag emdna-V09-06- 826 22-05-2013 M.K. tag emdna-V09-06-01
1494 * Correct warning from G4KDTree.cc 827 * Correct warning from G4KDTree.cc
1495 * G4KDMap : pop out elements from map 828 * G4KDMap : pop out elements from map
1496 829
1497 22-05-2013 M.K. tag emdna-V09-06-00 830 22-05-2013 M.K. tag emdna-V09-06-00
1498 * !!! MT !!!! Promoted to thread-global << 831 * !!! MT !!!! Promoted to thread-global storage :
1499 --> G4DNAGenericIonManager << 832 --> G4DNAGenericIonManager
1500 --> G4DNAMolecularMaterial 833 --> G4DNAMolecularMaterial
1501 --> G4DNAMolecularReactionTable 834 --> G4DNAMolecularReactionTable
1502 * G4KDMap added 835 * G4KDMap added
1503 * G4DNASmoluchowskiReactionModel : exce 836 * G4DNASmoluchowskiReactionModel : exception description enhanced
1504 * G4ITTrackingInteractivity : "Initiali << 837 * G4ITTrackingInteractivity : "Initialize()" method added for simplify
1505 initialization of daughter classes << 838 intialization of daughter classes
1506 * G4DNAChemistryManager : AddEmptyLineI << 839 * G4DNAChemistryManager : AddEmptyLineInOuputFile method added
1507 840
1508 12-11-2012 M.K tag emdna-V09-05- 841 12-11-2012 M.K tag emdna-V09-05-35
1509 Remove unnecessary abort() and ex 842 Remove unnecessary abort() and exit(-1) previously introduced to avoid
1510 coverity warnings (rev 64993) 843 coverity warnings (rev 64993)
1511 844
1512 06-11-2012 G.Cosmo tag emdna-V09 845 06-11-2012 G.Cosmo tag emdna-V09-05-34
1513 Minor fixes for porting on AIX; m 846 Minor fixes for porting on AIX; mainly on use of const signature
1514 for objects in maps... 847 for objects in maps...
1515 848
1516 04-11-2012 M.K. tag emdna-V09-05-33 849 04-11-2012 M.K. tag emdna-V09-05-33
1517 G4IT : transform G4ITTrackingInfo 850 G4IT : transform G4ITTrackingInformation pointer to object (rev 64715)
1518 G4ITTrackingManager : get rid of 851 G4ITTrackingManager : get rid of attribute "fVerboseLevel" (rev 64716)
1519 G4ITStepProcessor.cc : correct co 852 G4ITStepProcessor.cc : correct coverity warnings in copy constructor (not used) (rev 64717)
1520 G4ITTransportationManager.hh : pu 853 G4ITTransportationManager.hh : put default constructor as private (rev 64718)
1521 G4VITModel.cc : rename variables 854 G4VITModel.cc : rename variables in copy constructor and assignment operator (------)
1522 G4MolecularDecayChannel.cc : adap 855 G4MolecularDecayChannel.cc : adapt copy constructor to avoid coverity warnings (rev 64719)
1523 G4MoleculeCounter.cc : get rid of 856 G4MoleculeCounter.cc : get rid of duplicated layout (------)
1524 G4DNAMolecularStepByStepModel : a 857 G4DNAMolecularStepByStepModel : add an exception in the assignment operator (rev 64720)
1525 G4ITTrackingManager.hh : remove r 858 G4ITTrackingManager.hh : remove remainders of fVerboseLevel (rev 64722)
1526 Ionisation Models (Born, Rudd, Ru 859 Ionisation Models (Born, Rudd, RuddExtended) :
1527 set fAtomDeexcitation = 0 (re 860 set fAtomDeexcitation = 0 (rev 64723)
1528 add "else" before "if" statem 861 add "else" before "if" statements and
1529 add variables to avoid ma 862 add variables to avoid many checks on particleDefinition. (rev 64724)
1530 dna.files : update files (rev 647 863 dna.files : update files (rev 64725)
1531 864
1532 03-11-2012 S.I. tag emdna-V09-05-32 865 03-11-2012 S.I. tag emdna-V09-05-32
1533 Switched to usage of SetEmModel a 866 Switched to usage of SetEmModel and EmModel in all dna/processes
1534 classes 867 classes
1535 868
1536 24-10-2012 M.K tag emdna-V09 869 24-10-2012 M.K tag emdna-V09-05-31
1537 G4ITNavigator is updated to new i 870 G4ITNavigator is updated to new interface of ReplicaNavigation::ComputeStep
1538 (previously commented) 871 (previously commented)
1539 872
1540 23-10-2012 M.K tag emdna-V09 873 23-10-2012 M.K tag emdna-V09-05-30
1541 Add exception in G4DNASecondOrder 874 Add exception in G4DNASecondOrderReaction
1542 Add carriage return in G4DNASmolu 875 Add carriage return in G4DNASmoluchowskiReaction cc and hh
1543 876
1544 18-10-2012 M.K tag emdna-V09 877 18-10-2012 M.K tag emdna-V09-05-29
1545 Previous tag did not include hist 878 Previous tag did not include history changes
1546 879
1547 18-10-2012 M.K tag emdna-V09 880 18-10-2012 M.K tag emdna-V09-05-28
1548 Remove warning 881 Remove warning
1549 882
1550 17-10-2012 M.K tag emdna-V09 883 17-10-2012 M.K tag emdna-V09-05-27
1551 Correct a typo from previous tag 884 Correct a typo from previous tag
1552 885
1553 17-10-2012 M.K tag emdna-V09 886 17-10-2012 M.K tag emdna-V09-05-26
1554 Correct information in headers 887 Correct information in headers
1555 Rename G4DNADiffustionControlledM 888 Rename G4DNADiffustionControlledModel to G4DNASmoluchowskiReactionModel
1556 G4ITNavigator updated to new inte 889 G4ITNavigator updated to new interface of ReplicaNavigation::ComputeStep.
1557 890
1558 01-10-2012 SI, P.Pater tag emdna-V09 891 01-10-2012 SI, P.Pater tag emdna-V09-05-25
1559 Force kinetic energy to zero for 892 Force kinetic energy to zero for real killings in models.
1560 893
1561 12-07-2012 G.Cosmo tag emdna-V09 894 12-07-2012 G.Cosmo tag emdna-V09-05-24
1562 Explicitly use inclusion of heade 895 Explicitly use inclusion of headers for system of units and physical
1563 constants, in plan to remove impl 896 constants, in plan to remove implicit inclusion from globals.hh.
1564 897
1565 11.07.2012 M.K tag emdna-V09 898 11.07.2012 M.K tag emdna-V09-05-23
1566 Correct warnings introduce in previous 899 Correct warnings introduce in previous tag
1567 900
1568 11.07.2012 M.K tag emdna-V09 901 11.07.2012 M.K tag emdna-V09-05-22
1569 Tag to be proposed 902 Tag to be proposed
1570 903
1571 25.06.2012 M.K tag emdna-V09-05-21 904 25.06.2012 M.K tag emdna-V09-05-21
1572 Fix semantic warning related to f 905 Fix semantic warning related to forward declaration of G4ITNavigator_Lock
1573 Modify molecule's name 906 Modify molecule's name
1574 << 907
1575 21.06.2012 S.I tag emdna-V09-05-20 908 21.06.2012 S.I tag emdna-V09-05-20
1576 Update of electron elastic scatte << 909 Update of electron elastic scattering low limit
1577 910
1578 09.06.2012 M.K tag emdna-V09-05-19 911 09.06.2012 M.K tag emdna-V09-05-19
1579 Fixed shadowing 912 Fixed shadowing
1580 913
1581 04.06.2012 M.K tag emdna-V09-05-18 914 04.06.2012 M.K tag emdna-V09-05-18
1582 Add G4ITTrackingInteractivity + c 915 Add G4ITTrackingInteractivity + correct coverity warnings
1583 916
1584 24.05.2012 M.K tag emdna-V09-05-17 917 24.05.2012 M.K tag emdna-V09-05-17
1585 Remove unnecessary call of pow in 918 Remove unnecessary call of pow in G4DNASecondOrderReaction
1586 919
1587 23.05.2012 M.K tag emdna-V09-05-16 920 23.05.2012 M.K tag emdna-V09-05-16
1588 Add initialisation of G4ITTrackHo 921 Add initialisation of G4ITTrackHolder in copy constructor of
1589 G4ITStepManager 922 G4ITStepManager
1590 Prevent call of destructor of G4I 923 Prevent call of destructor of G4ITStepManager and
1591 G4DNAChemistryManager 924 G4DNAChemistryManager
1592 925
1593 23.05.2012 M.K tag emdna-V09-05-15 926 23.05.2012 M.K tag emdna-V09-05-15
1594 Display warning (only once) from 927 Display warning (only once) from G4DNAMolecularMaterial
1595 when one of its methods is called 928 when one of its methods is called using a material that is
1596 not defined as a molecule 929 not defined as a molecule
1597 930
1598 21.05.2012 M.K tag emdna-V09-05-14 931 21.05.2012 M.K tag emdna-V09-05-14
1599 Modify G4DNAMolecularMaterial 932 Modify G4DNAMolecularMaterial
1600 Modify G4DNADamages 933 Modify G4DNADamages
1601 Add G4DNASecondOrderReaction prot 934 Add G4DNASecondOrderReaction prototype
1602 Modify all models to use G4DNAMol 935 Modify all models to use G4DNAMolecularMaterial
1603 936
1604 14.05.2012 M.K tag emdna-V09-05-13 937 14.05.2012 M.K tag emdna-V09-05-13
1605 Add G4DNAMolecularMaterial 938 Add G4DNAMolecularMaterial
1606 Add G4DNADamages 939 Add G4DNADamages
1607 940
1608 10.05.2012 M.K tag emdna-V09-05-12 941 10.05.2012 M.K tag emdna-V09-05-12
1609 Add the possibility of calling G4 942 Add the possibility of calling G4ITStepManager::EndTracking()
1610 from UserReactionAction::EndProce 943 from UserReactionAction::EndProcessing()
1611 944
1612 08.05.2012 M.K tag emdna-V09-05-11 945 08.05.2012 M.K tag emdna-V09-05-11
1613 Use inverseErf from CLHEP 946 Use inverseErf from CLHEP
1614 947
1615 03.05.2012 M.K tag emdna-V09-05-10 948 03.05.2012 M.K tag emdna-V09-05-10
1616 Add erfc function for windows com 949 Add erfc function for windows compilator (VC++)
1617 950
1618 03.05.2012 M.K tag emdna-V09-05-09 951 03.05.2012 M.K tag emdna-V09-05-09
1619 Add an exception in molecular dec 952 Add an exception in molecular decay, in case no decay channel was proposed in input
1620 953
1621 03.05.2012 M.K tag emdna-V09-05-08 954 03.05.2012 M.K tag emdna-V09-05-08
1622 Add products of dissociative atta 955 Add products of dissociative attachments (as a molecular decay)
1623 Add new methods in G4ChemistryMan 956 Add new methods in G4ChemistryManager :
1624 - PushMolecule 957 - PushMolecule
1625 - PushMoleculeAtParentTimeAndPlac 958 - PushMoleculeAtParentTimeAndPlace
1626 Reset() at the end of G4ITStepMan 959 Reset() at the end of G4ITStepManager::Process()
1627 960
1628 30.03.2012 M.K tag emdna-V09-05-07 961 30.03.2012 M.K tag emdna-V09-05-07
1629 Same as emdna-V09-05-06 962 Same as emdna-V09-05-06
1630 963
1631 30.03.2012 M.K tag emdna-V09-05-06 964 30.03.2012 M.K tag emdna-V09-05-06
1632 1) Add separate navigator for syn 965 1) Add separate navigator for synchronous tracking
1633 New classes : 966 New classes :
1634 * G4ITTransportationManager 967 * G4ITTransportationManager
1635 * G4ITNavigator (just a small cha 968 * G4ITNavigator (just a small change from G4Navigator)
1636 2) A messenger for G4ITStepManage 969 2) A messenger for G4ITStepManager :
1637 * G4ITSteppingMessenger 970 * G4ITSteppingMessenger
1638 3) Solve bugs with normal and bro 971 3) Solve bugs with normal and brownian ITTransportation
1639 972
1640 14.03.2012 M.K tag emdna-V09-05-05 973 14.03.2012 M.K tag emdna-V09-05-05
1641 * int G4VITProcess::fProcessID 974 * int G4VITProcess::fProcessID
1642 int G4VITProcess::fNbProcess 975 int G4VITProcess::fNbProcess
1643 -> become size_t + related change 976 -> become size_t + related changes
1644 * when a poststep process propo 977 * when a poststep process proposes an IL < 0
1645 => considered as a time, and tran 978 => considered as a time, and transportation::computestep
1646 is used 979 is used
1647 980
1648 14.03.2012 M.K tag emdna-V09-05-04 981 14.03.2012 M.K tag emdna-V09-05-04
1649 Fix compilation warning 982 Fix compilation warning
1650 983
1651 14.03.2012 M.K tag emdna-V09-05-03 984 14.03.2012 M.K tag emdna-V09-05-03
1652 Improve the management of information i 985 Improve the management of information in G4ITStepProcessor
1653 Fix coverity warnings 986 Fix coverity warnings
1654 987
1655 18.01.2012 S.I. tag emdna-V09 988 18.01.2012 S.I. tag emdna-V09-05-02
1656 Removal of G4Water* classes in ut 989 Removal of G4Water* classes in utils
1657 990
1658 11.01.2012 M.K tag emdna-V09 991 11.01.2012 M.K tag emdna-V09-05-01
1659 Bug fix in G4DNAChemistryManager: 992 Bug fix in G4DNAChemistryManager::CreateSolvatedElectron
1660 concerning the final position of 993 concerning the final position of the solvated electron
1661 using Sanche thermalization 994 using Sanche thermalization
1662 995
1663 16.12.2011 S.I tag emdna-V09 996 16.12.2011 S.I tag emdna-V09-05-00
1664 Updated source of cross section f 997 Updated source of cross section file for elastic scattering
1665 998
1666 25.11.2011 M.K tag emdna-V09 999 25.11.2011 M.K tag emdna-V09-04-52
1667 Correct a typo in previous tag 1000 Correct a typo in previous tag
1668 1001
1669 25.11.2011 M.K tag emdna-V09 1002 25.11.2011 M.K tag emdna-V09-04-51
1670 Place the reaction products at th 1003 Place the reaction products at the reaction site
1671 rather than center of mass in DNA 1004 rather than center of mass in DNAMolecularReaction
1672 1005
1673 21.11.2011 M.K tag emdna-V09 1006 21.11.2011 M.K tag emdna-V09-04-50
1674 Change the name of macros in AddC 1007 Change the name of macros in AddClone_def.hh to
1675 avoid conflicts with ROOT. 1008 avoid conflicts with ROOT.
1676 Add short class description (comm 1009 Add short class description (comments added in the new files)
1677 in JavaDoc style for doxygen use. 1010 in JavaDoc style for doxygen use.
1678 1011
1679 21.11.2011 M.K tag emdna-V09 1012 21.11.2011 M.K tag emdna-V09-04-49
1680 Correct a wrong condition in the 1013 Correct a wrong condition in the step manager
1681 Avoid the call of Green brownian 1014 Avoid the call of Green brownian bridge when
1682 the time step is equal to zero (b 1015 the time step is equal to zero (bug)
1683 Give priority to G4Processes over 1016 Give priority to G4Processes over reaction processes
1684 when the time steps returned by t 1017 when the time steps returned by the time stepper
1685 and the processes are equal 1018 and the processes are equal
1686 Improve verbose 1019 Improve verbose
1687 1020
1688 21.11.2011 M.K tag emdna-V09 1021 21.11.2011 M.K tag emdna-V09-04-48
1689 Fix incoherent management of time 1022 Fix incoherent management of time and secondaries in management/
1690 Avoid memory leak related to the 1023 Avoid memory leak related to the management of ITs
1691 Correct verbose in new models & p 1024 Correct verbose in new models & process
1692 1025
1693 18.11.2011 M.K tag emdna-V09 1026 18.11.2011 M.K tag emdna-V09-04-47
1694 Fix uninitialized boolean variabl << 1027 Fix uninitialized boolean variable (fWriteFile)
1695 in G4DNAChemistryManager 1028 in G4DNAChemistryManager
1696 1029
1697 18.11.2011 M.K tag emdna-V09 1030 18.11.2011 M.K tag emdna-V09-04-46
1698 Fix compilation error in G4TrackL 1031 Fix compilation error in G4TrackList on macOs
1699 Clean G4DNAMolecularDecayDisplace 1032 Clean G4DNAMolecularDecayDisplacer from comments
1700 Correct a typo in G4DNAChemistryM 1033 Correct a typo in G4DNAChemistryManager (H20 -> H2O)
1701 1034
1702 15.11.2011 G.Cosmo tag emdna-V09 1035 15.11.2011 G.Cosmo tag emdna-V09-04-45
1703 Fixes to initialisation of static 1036 Fixes to initialisation of static data in G4VMolecularDecayDisplacer
1704 and G4DNAMolecularDecayDisplacer, 1037 and G4DNAMolecularDecayDisplacer, to allow generation of DLLs on
1705 Windows. 1038 Windows.
1706 Fixed compilation warning on icc 1039 Fixed compilation warning on icc compiler in
1707 G4MolecularDecayTable.cc 1040 G4MolecularDecayTable.cc
1708 1041
1709 10.11.2011 M.K. tag emdna-V09 1042 10.11.2011 M.K. tag emdna-V09-04-44
1710 Fix a bug in G4DNATransformElectr 1043 Fix a bug in G4DNATransformElectronModel
1711 1044
1712 10.11.2011 M.K. tag emdna-V09 1045 10.11.2011 M.K. tag emdna-V09-04-43
1713 Clean classes for release 1046 Clean classes for release
1714 Add comment into source 1047 Add comment into source
1715 Change name of some methods 1048 Change name of some methods
1716 Transform two independent singlet 1049 Transform two independent singleton pointers to auto_ptr
1717 in order to prevent the user from 1050 in order to prevent the user from deleting those classes
1718 (ITStepMan + DNAChemMan) 1051 (ITStepMan + DNAChemMan)
1719 1052
1720 10.11.2011 M.K. tag emdna-V09 1053 10.11.2011 M.K. tag emdna-V09-04-42
1721 For safety (at the time of static 1054 For safety (at the time of static members destruction)
1722 change fgManager in MolConf into 1055 change fgManager in MolConf into a pointer delete by
1723 the chemistryManager. 1056 the chemistryManager.
1724 1057
1725 09.11.2011 M.K. tag emdna-V09 1058 09.11.2011 M.K. tag emdna-V09-04-41
1726 Add friend class G4TrackList_Boun 1059 Add friend class G4TrackList_Boundary;
1727 in G4TrackListNode. 1060 in G4TrackListNode.
1728 Simplify and improve the use of d 1061 Simplify and improve the use of dnaChemMan
1729 Add more convenient methods in us 1062 Add more convenient methods in userReactionAction
1730 1063
1731 08.11.2011 M.K. tag emdna-V09 1064 08.11.2011 M.K. tag emdna-V09-04-40
1732 Fix coverity warnings 1065 Fix coverity warnings
1733 1066
1734 07.11.2011 M.K. tag emdna-V09 1067 07.11.2011 M.K. tag emdna-V09-04-39
1735 Add correct types/sub-types for D 1068 Add correct types/sub-types for DNAElectronSolvatation
1736 DNAMolecularDecay, DNABrownianTra 1069 DNAMolecularDecay, DNABrownianTransportation, ITTransp
1737 Add the possibility to link a dec 1070 Add the possibility to link a decay time to a given
1738 electronic configuration while de 1071 electronic configuration while declaring the decay
1739 scheme through : G4MoleculeDef::A 1072 scheme through : G4MoleculeDef::AddeConfToExcitedState
1740 Clean classes for release 1073 Clean classes for release
1741 1074
1742 03.11.2011 M.K. tag emdna-V09 1075 03.11.2011 M.K. tag emdna-V09-04-38
1743 Add dna libs in sources.cmake 1076 Add dna libs in sources.cmake
1744 1077
1745 03.11.2011 M.K. tag emdna-V09 1078 03.11.2011 M.K. tag emdna-V09-04-37
1746 Add G4ITStepManager fVerbose 1079 Add G4ITStepManager fVerbose
1747 Add dna includes in sources.cmake 1080 Add dna includes in sources.cmake
1748 << 1081
1749 01.11.2011 M.K. tag emdna-V09 1082 01.11.2011 M.K. tag emdna-V09-04-36
1750 Remove warnings on G4ITModelProce 1083 Remove warnings on G4ITModelProcessor,
1751 G4ITTransportation, G4TrackList o 1084 G4ITTransportation, G4TrackList on Windows
1752 1085
1753 01.11.2011 G.Cosmo 1086 01.11.2011 G.Cosmo
1754 Renamed export flags for DLL buil 1087 Renamed export flags for DLL builds to G4EM_ALLOC_EXPORT and
1755 updated GNUMakefiles to have it p 1088 updated GNUMakefiles to have it properly defined.
1756 1089
1757 31.10.2011 M.K tag emdna-V09-04-35 1090 31.10.2011 M.K tag emdna-V09-04-35
1758 Remove obsolete G4Exception 1091 Remove obsolete G4Exception
1759 Remove "friend class G4KDTree" in G4KDN 1092 Remove "friend class G4KDTree" in G4KDNode
1760 Remove G4VITProcessor and all relatives << 1093 Remove G4VITProcessor and all relatives
1761 Fix windows compilation errors & warnin 1094 Fix windows compilation errors & warnings
1762 1095
1763 28.10.2011 M.K tag emdna-V09-04-34 1096 28.10.2011 M.K tag emdna-V09-04-34
1764 Remove __PRETTY_FUNCTION__ introd 1097 Remove __PRETTY_FUNCTION__ introduce __Exception_Origin__
1765 Plus remove obsolete G4Exception 1098 Plus remove obsolete G4Exception
1766 1099
1767 28.10.2011 M.K tag emdna-V09-04-33 1100 28.10.2011 M.K tag emdna-V09-04-33
1768 Displace G4DNAChemistryManager, G 1101 Displace G4DNAChemistryManager, G4DNAMolecularReactionTable,
1769 G4VDNAReactionModel to utils 1102 G4VDNAReactionModel to utils
1770 Displace G4DNAMoleculeEncouterSte 1103 Displace G4DNAMoleculeEncouterStepper, G4DNAMoleculeReaction
1771 to models 1104 to models
1772 1105
1773 27.10.2011 M.K tag emdna-V09-04-32 1106 27.10.2011 M.K tag emdna-V09-04-32
1774 Fix BornIonisation + the two RuddIoni 1107 Fix BornIonisation + the two RuddIoni
1775 coverity errors. 1108 coverity errors.
1776 1109
1777 26.10.2011 M.K tag emdna-V09-04-31 1110 26.10.2011 M.K tag emdna-V09-04-31
1778 change std::shared_ptr to CLHEP::shared << 1111 change std::shared_ptr to CLHEP::shared_ptr
1779 1112
1780 26.10.2011 M.K. tag emdna-V09-04-30 1113 26.10.2011 M.K. tag emdna-V09-04-30
1781 Memory leak fixes 1114 Memory leak fixes
1782 G4MolecularConfiguration::fManager adde 1115 G4MolecularConfiguration::fManager added
1783 1116
1784 26.10.2011 M.K. tag emdna-V09-04-29 1117 26.10.2011 M.K. tag emdna-V09-04-29
1785 G4DNAIonisation : add models for C/N/O/ 1118 G4DNAIonisation : add models for C/N/O/Fe
1786 Add electron solvatation process & mode 1119 Add electron solvatation process & models
1787 Add chemical processes 1120 Add chemical processes
1788 1121
1789 21.10.2011 M.K. tag emdna-V09-04-28 1122 21.10.2011 M.K. tag emdna-V09-04-28
1790 Same as emdna-V09-04-27 including model << 1123 Same as emdna-V09-04-27 including models/ & processes/ from
1791 emdna-V09-04-24 1124 emdna-V09-04-24
1792 << 1125
1793 21.10.2011 M.K. tag emdna-V09-04-27 1126 21.10.2011 M.K. tag emdna-V09-04-27
1794 CMake fixes from emdna-V09-04-24 1127 CMake fixes from emdna-V09-04-24
1795 << 1128
1796 21.10.2011 M.K. tag emdna-V09-04-26 1129 21.10.2011 M.K. tag emdna-V09-04-26
1797 Bug fixes and new dev from the previous << 1130 Bug fixes and new dev from the previous tag
1798 1131
1799 21.10.2011 S. Incerti tag emdna-V09-04-25 1132 21.10.2011 S. Incerti tag emdna-V09-04-25
1800 Extension of ionisation by HZE proposed 1133 Extension of ionisation by HZE proposed by Z. Francis
1801 1134
1802 20.10.2011 M.K. tag emdna-V09-04-24 1135 20.10.2011 M.K. tag emdna-V09-04-24
1803 Bug fixes and new dev from the previous 1136 Bug fixes and new dev from the previous tag
1804 << 1137
1805 07.10.2011 M.K. tag emdna-V09-04-23 1138 07.10.2011 M.K. tag emdna-V09-04-23
1806 First tag with "molecules" files << 1139 First tag with "molecules" files
1807 << 1140
1808 07.10.2011 M.K. tag emdna-V09-04-22 1141 07.10.2011 M.K. tag emdna-V09-04-22
1809 Add molecules+management directory 1142 Add molecules+management directory
1810 First tag with "management" files 1143 First tag with "management" files
1811 1144
1812 09.09.2011 G.Folger tag emdna-V09 1145 09.09.2011 G.Folger tag emdna-V09-04-21
1813 utils/sources.cmake: remove refer << 1146 utils/sources.cmake: remove reference to non-existant
1814 G4DNAMoleculeManager.cc << 1147 G4DNAMoleculeManager.cc
1815 1148
1816 05.09.2011 A. M. M. K., S. I., tag emdna-V09 1149 05.09.2011 A. M. M. K., S. I., tag emdna-V09-04-20
1817 Updated sources.make and CMakeLis 1150 Updated sources.make and CMakeLists.txt
1818 1151
1819 30.08.2011 A. M. M. K., S. I., tag emdna-V09 1152 30.08.2011 A. M. M. K., S. I., tag emdna-V09-04-19
1820 Reorganized whole architecture. 1153 Reorganized whole architecture.
1821 1154
1822 24.08.2011 A. Mantero, tag emdna-V09-04-18 1155 24.08.2011 A. Mantero, tag emdna-V09-04-18
1823 Fixed a bug regarding energy depo 1156 Fixed a bug regarding energy deposition (bindingEnergy=0
1824 if no deexcitation) 1157 if no deexcitation)
1825 1158
1826 22.08.2011 S. Incerti, tag emdna-V09-04-17 1159 22.08.2011 S. Incerti, tag emdna-V09-04-17
1827 Changed code (em0006) numbering f 1160 Changed code (em0006) numbering for G4Exception
1828 1161
1829 19.08.2011 S. Incerti, tag emdna-V09-04-16 1162 19.08.2011 S. Incerti, tag emdna-V09-04-16
1830 Switched to new G4Exception synta 1163 Switched to new G4Exception syntax
1831 1164
1832 04.08.2011 A. Mantero, tag emdna-V09-04-15 1165 04.08.2011 A. Mantero, tag emdna-V09-04-15
1833 Added enhanced debug information 1166 Added enhanced debug information in ionisation models
1834 1167
1835 02.08.2011 S. Incerti, tag emdna-V09-04-14 1168 02.08.2011 S. Incerti, tag emdna-V09-04-14
1836 Removed wrong pointer delete in G4DNARu 1169 Removed wrong pointer delete in G4DNARuddIonisation*
1837 1170
1838 28.07.2011 S. Incerti, tag emdna-V09-04-13 1171 28.07.2011 S. Incerti, tag emdna-V09-04-13
1839 Removed obsolete information. 1172 Removed obsolete information.
1840 1173
1841 28.07.2011 S. Incerti, tag emdna-V09-04-12 1174 28.07.2011 S. Incerti, tag emdna-V09-04-12
1842 Updated deexcitation initialization in 1175 Updated deexcitation initialization in ionization models.
1843 1176
1844 21.07.2011 A. Mantero, tag emdna-V09-04-11 1177 21.07.2011 A. Mantero, tag emdna-V09-04-11
1845 Coverity warnings removal 1178 Coverity warnings removal
1846 1179
1847 11.07.2011 S.Incerti, tag emdna-V09-04-10 1180 11.07.2011 S.Incerti, tag emdna-V09-04-10
1848 - Increased energy limits for 1181 - Increased energy limits for
1849 G4DNAChargeIncrease 1182 G4DNAChargeIncrease
1850 G4DNAChargeDecrease 1183 G4DNAChargeDecrease
1851 G4DNADingfelderChargeIncreaseModel 1184 G4DNADingfelderChargeIncreaseModel
1852 G4DNADingflederChargeDecreaseModel 1185 G4DNADingflederChargeDecreaseModel
1853 in collaboration with Ziad F. 1186 in collaboration with Ziad F.
1854 - This tag includes Alfonso's upgrade << 1187 - This tag includes Alfonso's upgrade
1855 of ionisation classes for Auger e- 1188 of ionisation classes for Auger e-
1856 1189
1857 16.05.2011 A.Mantero, tag emdna-V09-04-09 1190 16.05.2011 A.Mantero, tag emdna-V09-04-09
1858 Further compilation warnings removal 1191 Further compilation warnings removal
1859 1192
1860 16.05.2011 A.Mantero, tag emdna-V09-04-08 1193 16.05.2011 A.Mantero, tag emdna-V09-04-08
1861 Compilation warnings removal 1194 Compilation warnings removal
1862 1195
1863 12.05.2011 A.Mantero, tag emdna-V09-04-07 1196 12.05.2011 A.Mantero, tag emdna-V09-04-07
1864 added Atomic Deexcitation to Ionisation 1197 added Atomic Deexcitation to Ionisation Models
1865 1198
1866 04.05.2011 S. Incerti, tag emdna-V09-04-06 1199 04.05.2011 S. Incerti, tag emdna-V09-04-06
1867 Fixed compilation error on icc in 1200 Fixed compilation error on icc in
1868 G4DNADingfelderChargeIncreaseModel.cc. 1201 G4DNADingfelderChargeIncreaseModel.cc.
1869 1202
1870 03.05.2011 S. Incerti, tag emdna-V09-04-05 1203 03.05.2011 S. Incerti, tag emdna-V09-04-05
1871 Changed process sub-type numberin 1204 Changed process sub-type numbering.
1872 1205
1873 30.04.2011 S. Incerti, tag emdna-V09-04-04 1206 30.04.2011 S. Incerti, tag emdna-V09-04-04
1874 Fixed coverity warnings. 1207 Fixed coverity warnings.
1875 1208
1876 05.04.2011 S. Incerti, tag emdna-V09-04-03 1209 05.04.2011 S. Incerti, tag emdna-V09-04-03
1877 Updated all models for handling o 1210 Updated all models for handling of variable density.
1878 1211
1879 17.03.2011 S. Incerti, tag emdna-V09-04-02 1212 17.03.2011 S. Incerti, tag emdna-V09-04-02
1880 Addition of dependencies to confi 1213 Addition of dependencies to configuration files.
1881 1214
1882 17.03.2011 S. Incerti, tag emdna-V09-04-01 1215 17.03.2011 S. Incerti, tag emdna-V09-04-01
1883 Addition of all files. 1216 Addition of all files.
1884 1217
1885 13.02.2011 S. Incerti, tag emdna-V09-04-00 1218 13.02.2011 S. Incerti, tag emdna-V09-04-00
1886 Creation of dna sub-package in el 1219 Creation of dna sub-package in electromagnetic category.