Geant4 Cross Reference |
1 # Category emdna History << 1 ========================================================= >> 2 Geant4 - an Object-Oriented Toolkit for Simulation in HEP >> 3 ========================================================= >> 4 >> 5 Category History file >> 6 --------------------- >> 7 This file should be used by G4 developers and category coordinators >> 8 to briefly summarize all major modifications introduced in the code >> 9 and keep track of all category-tags. >> 10 It DOES NOT substitute the CVS log-message one should put at every >> 11 committal in the CVS repository ! >> 12 >> 13 ---------------------------------------------------------- >> 14 * Reverse chronological order (last date on top), please * >> 15 ----------------------------------------------------------* 2 16 3 See `CONTRIBUTING.rst` for details of **requir << 17 19-05-2016, MK, tag emdna-V10-01-58 4 which **must** added in reverse chronological << 5 It must **not** be used as a substitute for wr << 6 << 7 ---------------------------------------------- << 8 << 9 ## 2024-10-31 Hoang Tran (emdna-V11-02-17) << 10 - missing value in DNA PTB Ionization Structur << 11 - missing GetMaterial() in DNA PTB Excitation << 12 << 13 ## 2024-10-02 Hoang Tran (emdna-V11-02-16) << 14 - Modified the molecule names of OH, HO2, O in << 15 Each molecule configuration has a molecule d << 16 << 17 ## 2024-08-27 Gabriele Cosmo (emdna-V11-02-15) << 18 - Fixed reported Coverity defects for use of s << 19 and const iterators. << 20 << 21 ## 2024-08-20 Hoang Tran (emdna-V11-02-14) << 22 - debug invalid a root node of KDTree << 23 << 24 ## 2024-08-08 Gabriele Cosmo (emdna-V11-02-13) << 25 - Fixed reported Coverity defects in G4LEPTSEl << 26 for explicit null dereferenced pointer and o << 27 cleanup. << 28 << 29 ## 2024-05-23 Hoang Tran (emdna-V11-02-12) << 30 - Delete enum unused due to te use of EmParame << 31 to control chemistry models in G4EmDNAChemis << 32 << 33 ## 2024-05-11 Gabriele Cosmo (emdna-V11-02-11) << 34 - Fixed compilation error on macOS/clang with << 35 of std::function in G4OctreeFinder. << 36 << 37 ## 2024-05-06 Gabriele Cosmo (emdna-V11-02-10) << 38 - Fixed compilation warning on macOS/XCode for << 39 in G4DNADoubleIonisationModel and G4DNAMulti << 40 << 41 ## 2024-04-25 Hoang Tran (emdna-V11-02-09) << 42 - Delete DelayLists at the end of chemistry st << 43 - clean the G4Scheduler << 44 << 45 ## 2024-04-24 W.G.Shin (emdna-V11-02-08) << 46 - G4DNAELSEPAElasticModel << 47 - Modified to be compatible with density sca << 48 << 49 ## 2024-04-19 Gabriele Cosmo (emdna-V11-02-07) << 50 - Fixed compilation error on Windows VC++ with << 51 Added missing declarations for TG4MoleculeSh << 52 Based on [GitHub PR#69](https://github.com/G << 53 << 54 ## 2024-04-18 Hoang Tran (emdna-V11-02-06) << 55 - debug invalid KDTree node. << 56 << 57 ## 2024-04-15 Vladimir Ivanchenko (emdna-V11-0 << 58 - G4GeneralIonIonisationModel, G4DNAIonChargeI << 59 G4DNAIonChargeDecreaseModel - new classes im << 60 ions heavier than Helium << 61 - G4DNAChargeDecrease, G4DNAChargeIncrease - r << 62 min/max model energy inside processes clas << 63 - G4DNARuddIonisationExtendedModel - updated i << 64 from the general model << 65 - source.cmake in models sub-directory become << 66 both .hh and .cc files << 67 << 68 ## 2024-04-10 Shogo Okada (emdna-V11-02-04) << 69 - G4DNAElectronHoleRecombination << 70 - Changed the branch condition in FindReacta << 71 involved in electron-hole recombination << 72 - G4DNAWaterDissociationDisplacer << 73 - Added dissociative decay channels for mult << 74 - G4DNAMultipleIonisationManager << 75 - New class focusing on generation of multip << 76 calculation of scale parameter to compute << 77 multiple-ionization process << 78 - G4DNADoubleIonisation << 79 - G4DNATripleIonisation << 80 - G4DNAQuadrupleIonisation << 81 - New process classes for multiple-ionizatio << 82 - G4DNADoubleIonisationModel << 83 - G4DNATripleIonisationModel << 84 - G4DNAQuadrupleIonisationModel << 85 - New model classes related to multiple-ioni << 86 << 87 ## 2024-04-05 Vladimir Ivanchenko (emdna-V11-0 << 88 - G4DNARuddIonisationExtendedModel - updated m << 89 uppload data in the class constructor once << 90 effective charge approach for all ions wit << 91 correct computation of stopping power and << 92 variables before sampling, optimized algor << 93 becomes ~10 times faster), removed unused << 94 << 95 ## 2024-02-29 Hoang Tran (emdna-V11-02-02) << 96 - correct verbose conditions for warning in IR << 97 << 98 ## 2024-02-24 Hoang Tran (emdna-V11-02-01) << 99 - Optimize IRT-syn at 1 ps for high LET applic << 100 << 101 ## 2023-12-15 Vladimir Ivanchenko (emdna-V11-0 << 102 - G4DNABornAngle - fixed numerical problem: ad << 103 use relativistic formula for max energy tr << 104 << 105 ## 2023-11-14 Ben Morgan (emdna-V11-01-25) << 106 - Use G4FindDataDir to access data libraries i << 107 << 108 ## 2023-11-11 Hoang Tran (emdna-V11-01-24) << 109 - correct fastercode section for dna opt6 << 110 << 111 ## 2023-10-12 Hoang Tran (emdna-V11-01-23) << 112 - correct scavenger counter for oxygen << 113 << 114 ## 2023-10-11 Hoang Tran (emdna-V11-01-22) << 115 - Fixed the K shell bug in G4DNARuddIonisation << 116 << 117 ## 2023-10-10 Hoang Tran (emdna-V11-01-21) << 118 - improved equilibrium processes, introduced G << 119 << 120 ## 2023-09-04 Gabriele Cosmo (emdna-V11-01-20) << 121 - In navigation classes, removed references to << 122 which is now deprecated. << 123 << 124 ## 2023-08-31 Gabriele Cosmo (emdna-V11-01-19) << 125 - Removed references to unused G4GRSSolid and << 126 << 127 ## 2023-08-29 (emdna-V11-01-18) << 128 - Fix minor/obvious Coverity issues << 129 << 130 ## 2023-07-21 Ben Morgan (emdna-V11-01-17) << 131 - Apply core clang-tidy fixes plus those for << 132 - Cons/destructor modernization << 133 - Readability and logic for conditionals/boo << 134 << 135 ## 2023-07-12 Ben Morgan (emdna-V11-01-16) << 136 - Apply patch from [GitHub PR 58](https://gith << 137 - Use std::erfc to avoid precision loss << 138 - Remove unused header << 139 << 140 ## 2023-06-10 Hoang Tran (emdna-V11-01-15) << 141 - minor correction for DNA material in option6 << 142 << 143 ## 2023-06-09 Hoang Tran (emdna-V11-01-14) << 144 - use analytical method for DNA material in op << 145 << 146 ## 2023-06-03 Vladimir Ivanchenko (emdna-V11-0 << 147 - G4DNARuddIonisationExtendedModel - model re- << 148 threads, applicable for scaled energy interv << 149 an ion data is not available proton x-sectio << 150 used, sampling of delta-electron is done usi << 151 << 152 ## 2023-05-25 Hoang Tran (emdna-V11-01-12) << 153 - Modified DNA cross section file name to new << 154 << 155 ## 2023-05-19 Hoang Tran (emdna-V11-01-11) << 156 - Add DNA cross section to dna_option6 << 157 << 158 ## 2023-05-17 Hoang Tran (emdna-V11-01-10) << 159 - Fix Compilation warnings on XCode << 160 << 161 ## 2023-05-04 Hoang Tran (emdna-V11-01-09) << 162 - correct the initial values of G4DNAEventSche << 163 << 164 ## 2023-04-28 Hoang Tran (emdna-V11-01-08) << 165 - add time structure (pulsed beam) to water ra << 166 << 167 ## 2023-04-26 Hoang Tran (emdna-V11-01-07) << 168 - correct KDTree bug << 169 << 170 ## 2023-03-24 Hoang Tran (emdna-V11-01-06) << 171 - icsd physicslist: deleted unused model, << 172 - Apdated RegisterModel function with new stru << 173 - added model data to G4DNAMaterialManager sin << 174 << 175 ## 2023-03-08 Gabriele Cosmo (emdna-V11-01-05) << 176 - Fixed compilation warning on macOS/XCode for << 177 in G4DNAVacuumModel::Initialise(). << 178 << 179 ## 2023-02-09 Hoang Tran (emdna-V11-01-04) << 180 - Introduced G4DNAMaterialManager to manage av << 181 and keeps DNA cross section data in one thread << 182 - minor change in G4VDNAModel << 183 << 184 ## 2023-01-27 Hoang Tran (emdna-V11-01-03) << 185 - reorganize multiple material model of PTB mo << 186 G4VDNAModel plays like a data layer for multip << 187 The concrete models are independent of G4DNAMo << 188 << 189 ## 2023-01-17 Hoang Tran (emdna-V11-01-02) << 190 - replaced string to material index and clean << 191 G4DNAPTBIonisationModel, G4DNAPTBElasticModel, << 192 G4DNAPTBExcitationStructure) - PTB models << 193 - added material pointer members for each conc << 194 - removed unused objects (G4DataVector()) << 195 << 196 ## 2023-01-06 Hoang Tran (emdna-V11-01-01) << 197 - clean G4DNAModelInterface file for the model << 198 << 199 ## 2022-12-12 Hoang Tran (emdna-V11-01-00) << 200 - fix coverity of G4DNARuddIonisationExtendedM << 201 (Uninitialized scalar variable) from cand1 ana << 202 << 203 ## 2022-11-24 Vladimir Ivanchenko (emdna-V11-0 << 204 - G4DNARuddIonisationExtendedModel - fixed com << 205 radioactive decay module - before this upd << 206 only 5 ions have data needed for this mode << 207 model scaling relation to the carbon ion i << 208 no data; low-energy limit is used now more << 209 but not killed, because they may have radi << 210 lines are removed from the class << 211 << 212 ## 2022-11-23 Gabriele Cosmo (emdna-V11-00-38) << 213 - Fixed more compilation warnings for implicit << 214 << 215 ## 2022-11-22 Hoang Tran (emdna-V11-00-37) << 216 - delete unused tests in dna (G4DNAProcessTest << 217 << 218 ## 2022-11-18 Gabriele Cosmo (emdna-V11-00-36) << 219 - Fixed compilation warnings for implicit type << 220 << 221 ## 2022-11-08 Vladimir Ivanchenko (emdna-V11-0 << 222 - G4DNAUeharaScreenedRutherfordElasticModel - << 223 low and high energy limit for the model; r << 224 << 225 ## 2022-11-01 Hoang Tran (emdna-V11-00-34) << 226 - Fix Coverity issues for ref-09 << 227 << 228 ## 2022-10-10 Hoang Tran (emdna-V11-00-33) << 229 - minor correction of IRT-syn model (chemistry << 230 after 1 ps. << 231 << 232 ## 2022-10-21 Yann Perrot, Le Tuan Anh (emdna- << 233 - Add nitrogen models from PTra code << 234 << 235 ## 2022-10-10 Hoang Tran (emdna-V11-00-31) << 236 - Fixed minor mistake of file name in G4DNARPW << 237 - Added protection for HighEnergyLimit/LowEner << 238 G4DNARPWBAExcitationModel << 239 << 240 ## 2022-10-07 Gabriele Cosmo (emdna-V11-00-30) << 241 - Fixed compilation warnings on Intel/icx comp << 242 but not used in G4ITNavigator2. << 243 << 244 ## 2022-10-05 Hoang Tran (emdna-V11-00-29) << 245 - Fix user's report for IRT model. << 246 If the first IRTSampling won't give any rea << 247 << 248 ## 2022-10-03 Hoang Tran (emdna-V11-00-28) << 249 - Fix Coverity static analysis for ref-08 << 250 uninit_member in G4DNAMillerGreenExcitationMo << 251 G4DNADingfelderChargeIncreaseModel,G4DNARuddI << 252 Use auto & instead of auto : G4ITFinder, G4DN << 253 << 254 ## 2022-09-08 Hoang Tran (emdna-V11-00-27) << 255 - Resolve dependency inconsistencies : << 256 dna/management/include/G4ChemicalMoleculeF << 257 dna/management/include/G4UserMeshAction.hh << 258 dna/management/include/G4OctreeFinder.hh i << 259 << 260 ## 2022-09-05 Ben Morgan (emdna-V11-00-26) << 261 - Partially resolve dependency inconsistencies << 262 - NB: cannot be resolved fully without intro << 263 G4emdna-man, G4emdna-molman, G4emdna-utils << 264 << 265 ## 2022-09-01 Seth R Johnson (emdna-V11-00-25) << 266 - Define G4CT_MAX_COUNT for changing "compile << 267 errors on NVHPC compiler. << 268 << 269 ## 2022-08-30 Vladimir Ivanchenko (emdna-V11-0 << 270 - G4DNAExcitation, G4DNAVibExcitation, G4DNARo << 271 cleanup according to the recent G4VEmProce << 272 headers are moved to source; C++11 keyward << 273 << 274 ## 2022-06-21 Igor Semeniouk (emdna-V11-00-23) << 275 - G4DNABornIonisationModel1.cc, G4DNACPA100Ela << 276 G4DNACPA100IonisationModel.cc, G4DNAChampion << 277 G4DNAELSEPAElasticModel.cc, G4DNAEmfietzoglo << 278 G4DNAIonElasticModel.cc, G4DNAQuinnPlasmonEx << 279 G4DNARPWBAIonisationModel.cc, G4DNARelativis << 280 G4DNASancheExcitationModel.cc : << 281 use G4FindDataDir("G4LEDATA") to find datase << 282 << 283 ## 2022-06-03 Hoang Tran (emdna-V11-00-22) << 284 - correct DNA ion definitions in G4DNARuddIoni << 285 << 286 ## 2022-06-01 Hoang Tran (emdna-V11-00-21) << 287 - G4Octree : fixed Coverity warning. << 288 << 289 ## 2022-05-24 Hoang Tran (emdna-V11-00-20) << 290 - update data structure to improve performance << 291 << 292 ## 2022-05-18 Gabriele Cosmo (emdna-V11-00-19) << 293 - G4ITTransportation: fixed misuse of bitwise << 294 << 295 ## 2022-05-12 Sergio Losilla (emdna-V11-00-18) << 296 - Added missing headers. << 297 << 298 ## 2022-05-11 Hoang Tran (emdna-V11-00-17) << 299 - change the scavenging filter of the IRT beyo << 300 << 301 ## 2022-05-02 Hoang Tran (emdna-V11-00-16) << 302 - Add localthread for fUse of G4VMoleculeCount << 303 << 304 ## 2022-04-27 Miguel A. Cortes-Giraldo and Hoa << 305 - Incorporation of model based on RPWBA to tra << 306 - Added G4DNARPWBAExcitationModel, G4DNARPWBAI << 307 << 308 ## 2022-04-25 Hoang Tran (emdna-V11-00-14) << 309 - add UserBrownianAction in G4DNABrownianTrans << 310 G4DNAMolecularDissociation << 311 - replace G4int by int64_t for width integer t << 312 - add fResetScavenger in G4SchedulerMessenger << 313 << 314 ## 2022-04-14 Paolo Dondero (emdna-V11-00-13) << 315 - save local instances for recurrent access to << 316 G4DNAMillerGreenExcitationModel, G4DNARuddIo << 317 G4DNARuddIonisationModel << 318 - use G4Pow and G4Log instead of std::pow and << 319 - inside G4DNARuddIonisationExtendedModel comm << 320 inside G4DNAGenericIonsManager << 321 << 322 ## 2022-04-14 Hoang Tran (emdna-V11-00-12) << 323 - Debug the report #2235 which might be relate << 324 - Clean code << 325 - Delete G4ITFinder.cc << 326 << 327 ## 2022-04-04 Paolo Dondero (emdna-V11-00-11) << 328 - save local instances for recurrent access to << 329 G4DNADingfelderChargeDecreaseModel and G4DNADi << 330 - use G4Pow and G4Log instead of std::pow and << 331 << 332 ## 2022-03-18 SI (emdna-V11-00-10) << 333 - add protection in G4DNACPA100IonisationModel << 334 << 335 ## 2022-03-15 Hoang Tran (emdna-V11-00-09) << 336 - remove macro commands to control the chemist << 337 (creating models in G4SchedulerMessenger can m << 338 - add flag OctreeFinder in IRT_syn's Initializ << 339 << 340 ## 2022-03-04 Hoang Tran (emdna-V11-00-08) << 341 - add macro commands to control the chemistry << 342 parameters including the chemical molecules an << 343 << 344 ## 2022-02-18 Hoang Tran (emdna-V11-00-07) << 345 - optimize IRT-syn model, use reaction radius << 346 - delete G4VReactionType, G4DNAReactionTypeMan << 347 G4DNAPartiallyDiffusionControlled << 348 - delete G4DNAIRT_geomtries << 349 << 350 ## 2022-02-17 Jonas Hahnfeld (emdna-V11-00-06) << 351 - `G4ITTransportation`: Make `PrepareState` mo << 352 - `G4DNAPolyNucleotideReactionProcess`: << 353 - Move `PrepareState` and `State` macros int << 354 - Make `PrepareState` more function-like, ex << 355 - Move variable `pMoleculeA` under `G4VERBOS << 356 << 357 ## 2022-02-10 Hoang Tran (emdna-V11-00-05) << 358 - add the condition of water material for the << 359 warning in G4DNAMolecularDissociation::DecayIt << 360 << 361 ## 2022-02-3 Hoang Tran (emdna-V11-00-04) << 362 - modify the macro in G4Molecule.cc and G4ITTy << 363 << 364 ## 2022-01-18 Jonas Hahnfeld (emdna-V11-00-03) << 365 - Prefer pointer to `const G4Material` if poss << 366 << 367 ## 2022-01-17 Jonas Hahnfeld (emdna-V11-00-02) << 368 - Remove useless `const_cast` of `G4VSensitive << 369 << 370 ## 2021-12-23 Hoang Tran (emdna-V11-00-01) << 371 - add G4DNAPolyNucleotideReactionProcess, G4VD << 372 files for DNA damage applications << 373 << 374 ## 2021-12-10 Ben Morgan (emdna-V11-00-00) << 375 - Change to new Markdown History format << 376 << 377 --- << 378 << 379 # History entries prior to 11.0 << 380 << 381 8-11-2021, H. Tran, emdna-V10-07-15 << 382 - corrected Circular dependencies for mesoscop << 383 - corrected the problem in IRT << 384 << 385 4-11-2021, H. Tran, emdna-V10-07-14 << 386 - define a G4FakeParticleID::fLastValue in the << 387 delete G4FakeParticleID.cc, << 388 solve arithmetic problems, << 389 Added new mesoscopic model for dna chemistry << 390 << 391 21-10-2021, W.G.Shin, emdna-V10-07-13 << 392 - Added a virtual classes for DNA geometry - G << 393 Modified classes - G4DNAIRT, G4DNAIRTMolecul << 394 G4ITModelProcessor, G4Sch << 395 G4DNAMolecularReactionTab << 396 << 397 23-09-2021, A. Ribon, emdna-V10-07-12 << 398 - G4ITTransportation, G4DNAElastic, G4DNAExcit << 399 G4DNAVibExcitation, G4DNAAttachment, G4DNACh << 400 G4DNAChargeIncrease, G4DNAElectronSolvation, << 401 G4DNASecondOrderReaction, G4DNAElectronHoleR << 402 G4DNABrownianTransportation : replaced hardw << 403 with enum values introduced in the new class << 404 << 405 18-07-2021, V. Ivanchenko, emdna-V10-07-11 << 406 - G4DNABohrExcitationModel2, G4DNABohrIonisati << 407 G4VLEPSModel - updated interfaces to G4Physi << 408 << 409 16-07-2021, D. Sakata, emdna-V10-07-10 << 410 - Fixed initialization error in G4DNAELSEPAEla << 411 << 412 28-06-2021, G. Cosmo, emdna-V10-07-09 << 413 - Fixed compilation error in G4ITMultiNavigato << 414 enabled. << 415 << 416 31-05-2021, D.Sakata S. Guatelli, emdna-V10-07 << 417 - Added new classes G4DNADiracRMatrixExcitatio << 418 G4DNAQuinnPlasmonExcitatio << 419 G4DNARelativisticIonisatio << 420 G4DNAPlasmonExcitation << 421 - Modified G4DNAELSEPAElasticModel for gold << 422 << 423 9-05-2021, H.Tran, tag emdna-V10-07-07 << 424 - Add IRT-syn model << 425 << 426 16-04-2021, B.Morgan, tag emdna-V10-07-06 << 427 - Migrate build to modular CMake API << 428 << 429 27-04-2021, H.Tran, tag emdna-V10-07-05 << 430 - G4DNAElectronHoleRecombination: added Octree << 431 - G4DNABrownianTransportation: modified AlongS << 432 - added OctreeFinder and IRTUtils << 433 << 434 26-04-2021, V.Ivanchenko, tag emdna-V10-07-04 << 435 - G4DNABornAngle, G4DNARuddAngle - updated pri << 436 << 437 12-03-2021, L.Pandola, tag emdna-V10-07-03 << 438 - Move DNA-related Unit Tests from lowenergy/t << 439 << 440 24-02-2021, G.Cosmo, tag emdna-V10-07-02 << 441 - Fixed dependency on g4tools, now moved to ex << 442 << 443 16-02-2021, W.G.Shin, tag emdna-V10-07-01 << 444 - G4DNAElectronHoleRecombination << 445 Dissociation channel of electron-hole recomb << 446 G4EmDNAChemistry, _option1, _option2, _optio << 447 - G4DNAWaterDissociationDisplacer << 448 Added the fragment displacement for new diss << 449 << 450 29-10-2020, G.Cosmo, tag emdna-V10-06-12 << 451 - Fix thread contention on mutable data in G4D << 452 help resolving observed crashes in MT runs. << 453 Some code cleanup. << 454 << 455 27-10-2020, V.Ivanchenko, tag emdna-V10-06-11 << 456 - G4DNAMolecularMaterial - removed commented l << 457 - History file fixed << 458 << 459 25-10-2020, V.Ivanchenko, tag emdna-V10-06-10 << 460 - G4DNAMolecularMaterial - attempt to fix nigh << 461 in chem6 example - do not delete instance of << 462 << 463 24-10-2020, I. Hrivnacova, tag emdna-V10-06-09 << 464 - Added dependency on analysis/g4tools in GNUm << 465 required after analysis update (analysis-V10 << 466 << 467 12-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 << 468 - Fixed coverity warning << 469 << 470 10-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 << 471 - Fixed coverity warnings << 472 - Fix of IRT bug << 473 (protection for the crash induced by empty re << 474 << 475 28-05-2020, B.Morgan, tag emdna-V10-06-06 << 476 - Add missing G4analysismng module dependency << 477 << 478 20-05-20: W.G.Shin emdna-V10-06-05 << 479 - Revised displacement of OH radicals of B1A1 << 480 based on momentum conservation in G4DNAWaterDi << 481 - Added missing History << 482 << 483 26-04-20: W.G.Shin emdna-V10-06-04 << 484 - Fixed coverity test << 485 << 486 15-04-20: G.Cosmo emdna-V10-06-03 << 487 - G4MoleculeDefinition: copy constructor and a << 488 are not allowed (as for G4ParticleDefinition << 489 << 490 19-02-20: W.G.Shin emdna-V10-06-02 << 491 - Fixed memory issue on G4DNAMolecularReaction << 492 - Revised headeres of IRT classes << 493 << 494 12-02-20: W.G.Shin emdna-V10-06-01 << 495 - Added protections floating point exception i << 496 << 497 10-01-20: W.G.Shin emdna-V10-06-00 << 498 - Added classes for IRT << 499 - Added features in management classes for IRT << 500 G4ITModelProcessor ...) << 501 - Added features in G4DNAMolecularReactionTabl << 502 - Added molecules of Plante et al. (2017) (Oxy << 503 << 504 15-11-19: G.Cosmo emdna-V10-05-11 << 505 - Fixed cases of implicit type conversions fro << 506 << 507 8-11-19: HT, tag emdna-V10-05-10 << 508 - Fixed the exception divide by zero of diffus << 509 G4DNABrownianTransportation::AlongStepGetPhysi << 510 for the case of static molecules (DNA) (diffus << 511 << 512 24-10-19: J.Apostolakis, tag emdna-V10-05-09 << 513 - Enabled G4ItNavigator{1,2} to flag if it enc << 514 of external physical volume (meant for adapt << 515 << 516 19-10-19: WGS, SI, tag emdna-V10-05-08 << 517 - Added new model G4DNAELSEPAElasticModel << 518 << 519 11-10-19: WGS, SI, tag emdna-V10-05-07 << 520 - G4DNAOneStepThermalizationModel.* : << 521 added Kreipl and Meesungnoen amorphous ice mod << 522 - G4DNAWaterDissociationDisplacer* : updated << 523 << 524 03-06-2019, MK, tag emdna-V10-05-06 << 525 - Fix GCC9 warnings << 526 << 527 26-03-2019, HT, tag emdna-V10-05-05 << 528 - Added G4DNAMolecule << 529 << 530 10-03-2019, MK, tag emdna-V10-05-04 << 531 - Fix reaction site issue << 532 - Chemistry: clarify pointer ownership, clean << 533 << 534 11-03-2019, G.Cosmo, tag emdna-V10-05-03 << 535 - Fixed typos in printouts in G4MolecularConfi << 536 G4VITRestProcess, G4DNAElectronHoleRecombina << 537 << 538 18-01-2019, HT, tag emdna-V10-05-02 << 539 - Transformed the exception into warning in G4 << 540 << 541 28-12-2018, MK, tag emdna-V10-05-01 << 542 DEV-300 : G4DNAChemistryManager clarify pointe << 543 << 544 05-01-2019, HT, tag emdna-V10-05-00 << 545 - moved the checking position of track status << 546 in G4ITStepProcessor::SetInitialStep() << 547 << 548 01-09-2018, SI, tag emdna-V10-04-10 << 549 renamed tag << 550 << 551 01-09-2018, SI, tag emdna-v10-04-09 << 552 - bugzilla 2084 << 553 https://bugzilla-geant4.kek.jp/show_bug.cgi?id << 554 << 555 30-07-2018, SI, tag emdna-V10-04-08 << 556 - included upper energy limit of models (2) << 557 << 558 29-07-2018, SI, tag emdna-V10-04-07 << 559 - included upper energy limit of models << 560 << 561 01-07-2018, SI, tag emdna-V10-04-06 << 562 - added protection in Auger emission << 563 << 564 30-06-2018, MS, ZF, SI tag emdna-V10-04-05 << 565 - updated Si mass in G4DNAGenericIonsManager << 566 << 567 22-06-2018, SI tag emdna-V10-04-04 << 568 - fixed warnings in lepts models << 569 << 570 14-05-2018, SI tag emdna-V10-04-03 << 571 - chemistry update by Mathieu << 572 << 573 01-05-2018, SI tag emdna-V10-04-02 << 574 - chemistry update by Mathieu << 575 << 576 09-02-2018, M.Asai tag emdna-V10-04-01 << 577 - G4DNAMolecularMaterial.cc : << 578 GetDensityTableFor() and GetNumMolPerVolTabl << 579 at G4State_Init rather than G4State_Idle. << 580 - Co-works with run-V10-04-01 and global-V10-0 << 581 << 582 21-12-2017, G.Cosmo tag emdna-V10-04-00 << 583 - Fixed self-consistency in headers (missing # << 584 G4KDNode, G4MoleculeIterator and G4LEPTSDiff << 585 Fixed spurious definition of G4IT namespace << 586 Thanks to Raphael Isemann for reporting thes << 587 << 588 01-11-2017, MK tag emdna-V10-03-30 << 589 - remove models/test directory << 590 << 591 31-10-2017, JA ( tag missing ) << 592 - G4KDNode.hh: Add missing included file - nee << 593 << 594 16-08-2017, SI tag emdna-V10-03-28 << 595 - updated variable types in models << 596 << 597 10-08-2017, SI tag emdna-V10-03-27 << 598 - test << 599 << 600 10-08-2017, SI tag emdna-V10-03-26 << 601 - same as previous << 602 << 603 09-08-2017, SI tag emdna-V10-03-25 << 604 - same as previous << 605 << 606 09-08-2017, SI tag emdna-V10-03-24 << 607 - G4DNAEmfietzoglouIonisationModel: added prot << 608 << 609 03-08-2017, VI tag emdna-V10-03-23 << 610 - G4DNAExcitation, G4DNAIonisation - make cohe << 611 << 612 28-07-2017, SI, tag emdna-V10-03-22 << 613 - added stationary mode flag to CPA100 ionisat << 614 << 615 04-07-2017, SI, tag emdna-V10-03-21 << 616 - added tagging of atom. deexc. products in io << 617 << 618 31-05-2017, SM, tag emdna-V10-03-20 << 619 - Correct windows issues with path of diff. CS << 620 << 621 31-05-2017, SI, tag emdna-V10-03-19 << 622 - roll-back (Windows issues with previous tag) << 623 << 624 24-05-2017, SI, tag emdna-V10-03-18 << 625 - added tagging of atom. deexc. products in io << 626 << 627 11-05-2017, VI tag emdna-V10-03-17 << 628 - fix for gcc 7.1 warnings in G4DNACrossSectio << 629 << 630 10-05-2017, NL, MK, SI, tag emdna-V10-03-16 << 631 - fix for gcc 7.1 warnings in G4DNACrossSectio << 632 << 633 03-05-2017, SM, tag emdna-V10-03-15 << 634 - add the new G4DNADummyModel and allow the co << 635 << 636 27-04-2017, SM, tag emdna-V10-03-14 << 637 - correct small typo mistakes. << 638 << 639 27-04-2017, SM, tag emdna-V10-03-13 << 640 - update Models/G4DNAModelInterface to correct << 641 << 642 10-03-2017, MK, tag emdna-V10-03-12 << 643 - update utils/GNUmakefile << 644 << 645 13-02-2017, MK, tag emdna-V10-03-11 << 646 - G4DNAMolecularMaterial: update doxygen doc << 647 << 648 13-02-2017, MK, tag emdna-V10-03-10 << 649 - G4DNAMolecularMaterial: << 650 remove newly introduced methods, add fatal e << 651 add doxygen documentation << 652 << 653 10-02-2017, MK, tag emdna-V10-03-09 << 654 - Introducing G4PhysChemIO << 655 - Move call to G4TrackList::Pop(track) from G4 << 656 to G4ITTrackHolder. And make sure track stat << 657 when G4ITTrackHolder::PushToKill is called. << 658 << 659 09-02-2017, MK, tag emdna-V10-03-08 << 660 - G4KDNode.hh: remove unused G4ThreeVector hea << 661 - G4KDMap.hh: int->size_t + indentation << 662 - G4KDMap.cc: int->size_t << 663 - G4IT & G4Molecule: template specialization << 664 template<> G4KDNode<G4IT / G4Molecule>::~G4K << 665 << 666 24-01-2017, SM, tag emdna-V10-03-07 << 667 - add a ifdef to remove a warning (windows onl << 668 << 669 23-01-2017, SM, tag emdna-V10-03-06 << 670 - add missing G4DNAModelInterface files (.hh a << 671 << 672 23-01-2017, SM CV, tag emdna-V10-03-05 << 673 - add new G4DNAPTB* classes and the structure << 674 << 675 14-01-2017, MK, tag emdna-V10-02-37 << 676 - Prevent a crash when calling G4ITTrackingMan << 677 the UserTimeStepAction::PostTimeStepAction << 678 - Add missing: G4ITTrackingManager* G4Schedule << 679 << 680 28-12-2016, SI, tag emdna-V10-03-04 << 681 - extended upper energy limit of protons for << 682 G4DNARuddIonisationExtendedModel << 683 << 684 27-12-2016, SI, tag emdna-V10-03-03 << 685 - updated references of CPA100 classes << 686 << 687 23-12-2016, SI, tag emdna-V10-03-02 << 688 - updated sources.cmake << 689 << 690 23-12-2016, SI, tag emdna-V10-03-01 << 691 - commit of first CPA100 classes, part 2 << 692 << 693 21-12-2016, SI, tag emdna-V10-03-00 << 694 - commit of first CPA100 classes << 695 << 696 27-11-2016, MK, tag emdna-V10-02-36 << 697 - G4Electron_aq: correct charge << 698 - G4DNADamages -> G4DNADamage << 699 << 700 17-11-2016, MK, tag emdna-V10-02-35 << 701 - G4ManyFastLists.hh: iterator::GetTrackList() << 702 << 703 16-11-2016, MK, tag emdna-V10-02-34 << 704 - G4VMolecularDissociationDisplacer & G4DNAWat << 705 displacement types can be thread shared << 706 - G4TrackState: Move implementation of static << 707 G4VTrackStateID::Create() to c << 708 << 709 15-11-2016, MK, tag emdna-V10-02-33 << 710 - G4VMolecularDissociationDisplacer.cc: add mi << 711 << 712 14-11-2016, MK, tag emdna-V10-02-32 << 713 - Separate def and impl of dissociation flag t << 714 windows platforms << 715 << 716 14-11-2016, MK, tag emdna-V10-02-31 << 717 - G4DNAOneStepThermalizationModel.cc: << 718 tag init constexpr factor with number rather << 719 << 720 14-11-2016, MK, tag emdna-V10-02-30 << 721 - Use CLHEP::pi instead of M_PI << 722 << 723 14-11-2016, MK, tag emdna-V10-02-29 << 724 - Correct bracket enclosing << 725 << 726 14-11-2016, MK, tag emdna-V10-02-28 << 727 - G4VMoleculeCounter: move imp of static metho << 728 - Update displacers, oneStepTherm << 729 - WaterDisplacer: change the electron thermali << 730 - OneStepTherm: two inner thermalization model << 731 - Adds and use G4CTCounter << 732 << 733 02-11-2016, MK, tag emdna-V10-02-27 << 734 - add G4VMoleculeCounter & enable using custom << 735 - pass location information to molecule counte << 736 - G4ITNavigator2: relocate voxelNavigator befo << 737 computeStep & computeSafety << 738 << 739 07-08-2016, SI, tag emdna-V10-02-26 << 740 - added stationnary mode to sub-excitation ele << 741 << 742 23-06-2016, MK << 743 - G4Scheduler: move G4IosFlagsSaver to Process << 744 << 745 3-06-2016, MK, tag emdna-V10-02-25 << 746 - G4DNAScreenedRutherfordElasticModel: modify << 747 at init time << 748 - G4DNAUeharaScreenedRutherfordElasticModel: m << 749 << 750 3-06-2016, MK, tag emdna-V10-02-24 << 751 - G4DNAScreenedRutherfordElasticModel.hh: remo << 752 SetKillBelowThreshold deprecated << 753 - G4DNAScreenedRutherfordElasticModel.cc: remo << 754 prevent erasing/rewriting data (use isInit) << 755 - G4DNAChampionElasticModel.hh: rearrange decl << 756 - G4DNAChampionElasticModel.cc: move up if (i << 757 - G4DNAUeharaScreenedRutherfordElasticModel.cc << 758 model used for another part than e- << 759 << 760 1-06-2016, MK, tag emdna-V10-02-23 << 761 - G4DNAChemistryManager::CreateWaterMolecule: << 762 logic for interface with physics models << 763 << 764 31-05-2016, MK, tag emdna-V10-02-22 << 765 - G4DNAChampionElasticModel.cc: reset check ek << 766 << 767 28-05-2016, MK, tag emdna-V10-02-21 << 768 - G4DNAChampionElasticModel.cc: add missing "s << 769 one of the previous tags << 770 << 771 19-05-2016, MK, tag emdna-V10-02-20 << 772 - G4ITNavigator: remove warnings on gcc6.1 18 - G4ITNavigator: remove warnings on gcc6.1 773 19 774 17-05-2016, MK, tag emdna-V10-02-19 << 20 30-04-2016, MK 775 - G4DNAElectronSolvation, G4DNAOneStepThermali << 776 correct model and process names for solvation << 777 << 778 12-05-2016, MK, tag emdna-V10-02-18 << 779 - G4DNAChampionElasticModel.hh: << 780 * GetKillBelowThreshold is deprecated << 781 * Removed attributes: killBelowEnergy, lowEne << 782 tableFile, tableData << 783 * Method Theta(): remove G4ParticleDefinition << 784 - G4DNAUeharaScreenedRutherfordElasticModel.hh << 785 * SetKillBelowThreshold, GetKillBelowThreshol << 786 (use G4LowECapture or G4DNAElectronSolvatatio << 787 * SelectHighEnergyLimit uses SetHighEnergyLim << 788 emitted when used << 789 * Removed attributes: killBelowEnergy, lowEne << 790 - G4DNAChampionElasticModel.cc & G4DNAUeharaSc << 791 * Verbose check only if preprocessor flag is << 792 * Energy boundaries checked in Initialise() - << 793 * Call to G4Electron removed in Initialise() << 794 * Cleanup CrossSectionPerVolume by removing u << 795 * SampleSecondaries(): remove "kill below thr << 796 * G4DNAChampionElasticModel::Theta remove che << 797 - G4DNAOneStepThermalizationModel.cc: << 798 * Check verbose flag if a preprocessor flag i << 799 * Remove call to G4Electron at initialization << 800 - G4DNATransformElectronModel.cc: << 801 * Check verbose flag if a preprocessor flag i << 802 * Remove call to G4Electron at initialization << 803 * Add check if(G4DNAChemistryManager::IsActiv << 804 created; otherwise, the primary electron is << 805 << 806 30-04-2016, MK, tag emdna-V10-02-17 << 807 - G4VUserChemistryList: Add flag fIsPhysicsCon 21 - G4VUserChemistryList: Add flag fIsPhysicsConstructor 808 22 809 30-04-2016, MK, tag emdna-V10-02-16 << 23 30-04-2016, MK 810 - G4VUserChemistryList: remove a if statement 24 - G4VUserChemistryList: remove a if statement 811 - G4MoleculeCounter: at initialization time, p << 812 unregistered molecule definition << 813 << 814 22-04-2016, MK, tag emdna-V10-02-15 << 815 - G4DNAElectronSolvatation -> G4DNAElectronSol << 816 - G4DNASancheExcitationModel: remove warning w << 817 << 818 22-04-2016, MK, tag emdna-V10-02-14 << 819 - G4DNAMeltonAttachmentModel, G4DNASancheExcit << 820 remove usage of internal energy boundaries << 821 << 822 19-03-2016, SI, tag emdna-V10-02-13 << 823 - added nrj extensibility to SR and USR models << 824 << 825 11-03-2016, SI, tag emdna-V10-02-12 << 826 -roll back to files in emdna-V10-02-06 << 827 << 828 10-03-2016, SI, tag emdna-V10-02-11 << 829 -further cleaning of G4DNAUeharaScreenedRuther << 830 and G4DNAScreenedRutherfordElasticModel << 831 << 832 10-03-2016, SI, tag emdna-V10-02-10 << 833 -further cleaning of G4DNAUeharaScreenedRuther << 834 << 835 07-03-2016, SI, tag emdna-V10-02-09 << 836 -added possibility to extend applicability lim << 837 of G4DNAUeharaScreenedRutherfordElasticModel << 838 << 839 06-03-2016, SI, tag emdna-V10-02-08 << 840 -removed useless G4Pow declaration << 841 << 842 04-03-2016, SI, tag emdna-V10-02-07 << 843 -replaced std::log by G4Log << 844 -replaced std::log10() by G4Log()/g4pow->logZ( << 845 << 846 02-03-2016, SI, tag emdna-V10-02-06 << 847 -replaced std::exp by G4Exp << 848 << 849 02-03-2016, SI, tag emdna-V10-02-05 << 850 -replaced std::exp by G4Exp << 851 << 852 02-03-2016, SI, tag emdna-V10-02-04 << 853 -replaced std::exp by G4Exp << 854 25 855 01-03-2016, SI, tag emdna-V10-02-03 << 26 17-02-2016, MK 856 * update of fast computation of: << 857 -G4DNAScreenRutherfordElasticModel << 858 -G4DNAUeharaScreenRutherfordElasticModel << 859 by S. Okada (KEK, JP) << 860 << 861 17-02-2016, MK, tag emdna-V10-02-02 << 862 * G4MoleculeCounter: remove check of c++ versi 27 * G4MoleculeCounter: remove check of c++ version for unique_ptr/auto_ptr selection 863 28 864 16-12-2015, SI, tag emdna-V10-02-01 << 29 16-12-2015, SI, tag emdna-V10-01-56 865 * Ionisation models : in SampleSecondaries: << 30 * Ionisation models : in SampleSecondaries: 866 added protection on energy for interpolation m 31 added protection on energy for interpolation method change 867 32 868 16-12-2015, SI, tag emdna-V10-02-00 << 33 16-12-2015, SI 869 * G4DNAIonElasticModel::SampleSecondaries: add << 34 * G4DNAIonElasticModel::SampleSecondaries: added protection on 870 energy 35 energy 871 36 872 13-11-2015, MK, tag emdna-V10-01-55 37 13-11-2015, MK, tag emdna-V10-01-55 873 * G4MoleculeCounter::Use / InUse => move imple 38 * G4MoleculeCounter::Use / InUse => move implementation to source 874 file 39 file 875 40 876 10-11-2015, MK, tag emdna-V10-01-54 41 10-11-2015, MK, tag emdna-V10-01-54 877 * remove unused variables 42 * remove unused variables 878 43 879 10-11-2015, MK, tag emdna-V10-01-53 44 10-11-2015, MK, tag emdna-V10-01-53 880 * Coverity fixes 45 * Coverity fixes 881 46 882 06-11-2015, MK, tag emdna-V10-01-52 47 06-11-2015, MK, tag emdna-V10-01-52 883 * G4DNAWaterDissociationDisplacer: remove usel 48 * G4DNAWaterDissociationDisplacer: remove useless verbose 884 49 885 06-11-2015, MK, tag emdna-V10-01-51 50 06-11-2015, MK, tag emdna-V10-01-51 886 * G4FastList.hh : use WatcherSet::iterator to 51 * G4FastList.hh : use WatcherSet::iterator to avoid compilation errors 887 on x86_64-slc6-gcc49-Seq-BoundsCheck-UseIntern 52 on x86_64-slc6-gcc49-Seq-BoundsCheck-UseInternalCLHEP 888 53 889 06-11-2015, MK, tag emdna-V10-01-50 54 06-11-2015, MK, tag emdna-V10-01-50 890 * Avoid indirect include of G4TrackState to G4 55 * Avoid indirect include of G4TrackState to G4physicslists category 891 * Reorganize includes 56 * Reorganize includes 892 * Add G4ITStepProcessorState_Lock.hh 57 * Add G4ITStepProcessorState_Lock.hh 893 58 894 06-11-2015, MK, tag emdna-V10-01-49 59 06-11-2015, MK, tag emdna-V10-01-49 895 * G4MoleculeCounter: do not initialize compDou 60 * G4MoleculeCounter: do not initialize compDoubleWithPrecision::fPrecision 896 to other value than 0 - causing compilation er 61 to other value than 0 - causing compilation errors on windows 897 * G4DNAOneStepThermalizationModel: do not incl 62 * G4DNAOneStepThermalizationModel: do not include G4ITNavigator in the header 898 but in the source file - causing crashes on wi 63 but in the source file - causing crashes on windows 899 64 900 04-11-2015, MK, tag emdna-V10-01-48 65 04-11-2015, MK, tag emdna-V10-01-48 901 * G4DNARevertProbability: added and used in G4 66 * G4DNARevertProbability: added and used in G4DNAWaterDissociationDisplacer 902 * utils/sources.cmake: G4DNARevertProbability. 67 * utils/sources.cmake: G4DNARevertProbability.hh added 903 * G4DNAWaterDissociationDisplacer: fix and spe 68 * G4DNAWaterDissociationDisplacer: fix and speed up distributions 904 * models/GNUmakefile: add missing dependency 69 * models/GNUmakefile: add missing dependency 905 * G4DNAOneStepThermalizationModel: delete navi 70 * G4DNAOneStepThermalizationModel: delete navigator state when model 906 is deleted 71 is deleted 907 * G4FastList.icc: use typedef WatcherSet even 72 * G4FastList.icc: use typedef WatcherSet even when iterators are used 908 * G4ITModelProcessor: add RegisterModel, GetCo 73 * G4ITModelProcessor: add RegisterModel, GetComputeTimeStep + 909 fComputeTimeStep & fComputeReaction flags 74 fComputeTimeStep & fComputeReaction flags 910 * G4DNAElectronHoleRecombination: enable using << 75 * G4DNAElectronHoleRecombination: enable using this model even when not 911 all dissociation products have been defined 76 all dissociation products have been defined (they will just not be taken 912 into account) 77 into account) 913 * G4DNAMolecularReactionTable: delete reaction 78 * G4DNAMolecularReactionTable: delete reaction data when table is deleted 914 79 915 03-11-2015, MK, tag emdna-V10-01-47 80 03-11-2015, MK, tag emdna-V10-01-47 916 * G4Scheduler: Update time before G4ITStepProc 81 * G4Scheduler: Update time before G4ITStepProcessor::DoIt 917 * G4ITStepProcessor::DoIt : reset leading trac << 82 * G4ITStepProcessor::DoIt : reset leading tracks at the end of 918 the call 83 the call 919 84 920 03-11-2015, MK, tag emdna-V10-01-46 85 03-11-2015, MK, tag emdna-V10-01-46 921 * G4MolecularDissociation 86 * G4MolecularDissociation 922 * G4DNAOneStepSolvatationModel -> G4DNAOneStep 87 * G4DNAOneStepSolvatationModel -> G4DNAOneStepThermalizationModel 923 Avoid placing products outside volume of the 88 Avoid placing products outside volume of the mother track 924 (causing navigator complains) 89 (causing navigator complains) 925 << 90 926 03-11-2015, MK, tag emdna-V10-01-45 91 03-11-2015, MK, tag emdna-V10-01-45 927 * G4Serialize: Add definition in header for G4 92 * G4Serialize: Add definition in header for G4String 928 93 929 02-11-2015, MK, tag emdna-V10-01-44 94 02-11-2015, MK, tag emdna-V10-01-44 930 * G4Serialize: remove inline in front of templ 95 * G4Serialize: remove inline in front of template 931 * molecules: fix unit tests 96 * molecules: fix unit tests 932 * G4DNAElectronHoleRecombination: add missing 97 * G4DNAElectronHoleRecombination: add missing check on G4MoleculeCounter::InUse 933 * G4MoleculeCounter: add a flag to check or no 98 * G4MoleculeCounter: add a flag to check or not against scheduler time 934 * G4MoleculeTable: do not store G4MolecularCon << 99 * G4MoleculeTable: do not store G4MolecularConf anymore 935 -> G4MolecularConfMan is taking care of this 100 -> G4MolecularConfMan is taking care of this 936 << 101 937 30-10-2015, MK, tag emdna-V10-01-43 102 30-10-2015, MK, tag emdna-V10-01-43 938 * Bug solved in G4MoleculeCounter << 103 * Bug solved in G4MoleculeCounter 939 and made compatible wih G4DNAElectronHoleRec 104 and made compatible wih G4DNAElectronHoleRecombination (temporary) 940 * Unit tests corrected 105 * Unit tests corrected 941 * G4VITDiscreteProcess added 106 * G4VITDiscreteProcess added 942 * G4ReactionTableMessenger added 107 * G4ReactionTableMessenger added 943 * Intermediate update for 10.2 release 108 * Intermediate update for 10.2 release 944 << 109 945 27-10-2015, MK, tag emdna-V10-01-42 110 27-10-2015, MK, tag emdna-V10-01-42 946 * G4ITStepProcessor: clean dynamic_cast to G4V 111 * G4ITStepProcessor: clean dynamic_cast to G4VITProcess 947 << 112 948 26-10-2015, MK, tag emdna-V10-01-41 113 26-10-2015, MK, tag emdna-V10-01-41 949 * Sanche model: try to solve std::vector out o 114 * Sanche model: try to solve std::vector out of bounds 950 115 951 23-10-2015, MK, tag emdna-V10-01-40 116 23-10-2015, MK, tag emdna-V10-01-40 952 * remove all CLHEP::shared_ptr usage 117 * remove all CLHEP::shared_ptr usage 953 << 118 954 23-10-2015, CV, SM, tag emdna-V10-01-39 119 23-10-2015, CV, SM, tag emdna-V10-01-39 955 * Addded base class G4VDNAPTBModel << 120 * Addded base class G4VDNAPTBModel 956 121 957 28-09-2015, SI, tag emdna-V10-01-38 122 28-09-2015, SI, tag emdna-V10-01-38 958 * updated ion selection in G4DNARuddIonisation 123 * updated ion selection in G4DNARuddIonisationExtendedModel.cc for Z>2 959 124 960 19-09-2015, MK, tag emdna-V10-01-37 125 19-09-2015, MK, tag emdna-V10-01-37 961 * added proton ionisation scaling in G4DNABorn 126 * added proton ionisation scaling in G4DNABornIonisationModel1*.cc 962 * changed ion selection in G4DNARuddIonisation 127 * changed ion selection in G4DNARuddIonisationExtendedModel.cc for Z>2 963 128 964 17-09-2015, MK, tag emdna-V10-01-36 129 17-09-2015, MK, tag emdna-V10-01-36 965 * G4MoleculeGun: Remove compilation warnings 130 * G4MoleculeGun: Remove compilation warnings 966 131 967 04-09-2015 MK, tag emdna-V10-01-35 132 04-09-2015 MK, tag emdna-V10-01-35 968 * Fix G4MoleculeGun compilation errors 133 * Fix G4MoleculeGun compilation errors 969 134 970 03-09-2015 SI, tag emdna-V10-01-34 135 03-09-2015 SI, tag emdna-V10-01-34 971 * Added stationary regime to all inelastic mod 136 * Added stationary regime to all inelastic models 972 137 973 19-08-2015, MK 138 19-08-2015, MK 974 * Update G4MoleculeGun & G4MoleculeGunMessenge 139 * Update G4MoleculeGun & G4MoleculeGunMessenger: 975 - compatible with both Smoluchowski & Gilles 140 - compatible with both Smoluchowski & Gillespie models 976 141 977 15-08-2015, S.Incerti, tag emdna-V10-01-33 142 15-08-2015, S.Incerti, tag emdna-V10-01-33 978 * Added easier handling of cumulative proba. i 143 * Added easier handling of cumulative proba. in SR elastic models 979 144 980 13-08-2015, G.Cosmo, tag emdna-V10-01-32, 31 145 13-08-2015, G.Cosmo, tag emdna-V10-01-32, 31 981 * Fixed compilation warning on clang for misma 146 * Fixed compilation warning on clang for mismatch class/struct in 982 declaration of G4MoleculeShoot. 147 declaration of G4MoleculeShoot. 983 148 984 13-08-2015, G.Cosmo, tag emdna-V10-01-30 149 13-08-2015, G.Cosmo, tag emdna-V10-01-30 985 * Fixed compilation warning on clang for misma 150 * Fixed compilation warning on clang for mismatch class/struct in 986 declaration of G4MoleculeShootMessenger. 151 declaration of G4MoleculeShootMessenger. 987 152 988 12-08-2015, MK, tag emdna-V10-01-29 153 12-08-2015, MK, tag emdna-V10-01-29 989 * Add G4Serialize in the build tree temporaril 154 * Add G4Serialize in the build tree temporarily 990 155 991 12-08-2015, MK, tag emdna-V10-01-28 156 12-08-2015, MK, tag emdna-V10-01-28 992 * G4Serialize added 157 * G4Serialize added 993 158 994 12-08-2015, MK 159 12-08-2015, MK 995 * G4memory : quick removal of CLHEP::shared_pt 160 * G4memory : quick removal of CLHEP::shared_ptr dependency 996 161 997 24-07-2015, MK 162 24-07-2015, MK 998 - G4MolecularReactionTable 163 - G4MolecularReactionTable 999 * Add get methods 164 * Add get methods 1000 - G4MoleculeGun, G4MoleculeGunMessenger 165 - G4MoleculeGun, G4MoleculeGunMessenger 1001 * Molecule gun : place randomly in a box 166 * Molecule gun : place randomly in a box 1002 167 1003 15-07-2015, MK 168 15-07-2015, MK 1004 - G4DNAAttachment, G4DNAChargeDecrease, G4DNA << 169 - G4DNAAttachment, G4DNAChargeDecrease, G4DNADissociation, 1005 G4DNAExcitation, G4DNAIonisation 170 G4DNAExcitation, G4DNAIonisation 1006 * processes & models initialisation again 171 * processes & models initialisation again 1007 172 1008 15-07-2015, MK, tag emdna-V10-01-26 173 15-07-2015, MK, tag emdna-V10-01-26 1009 -G4ITModelProcessor & G4ITStepProcessor: 174 -G4ITModelProcessor & G4ITStepProcessor: 1010 * add macro to prevent warnings in non-verbo 175 * add macro to prevent warnings in non-verbose mode 1011 176 1012 11-07-2015, MK, tag emdna-V10-01-25 177 11-07-2015, MK, tag emdna-V10-01-25 1013 - Add G4IosFlagsSaver.hh to sources.cmake 178 - Add G4IosFlagsSaver.hh to sources.cmake 1014 - G4IosFlagsSaver.hh add an extra line of the 179 - G4IosFlagsSaver.hh add an extra line of the end of the file 1015 180 1016 10-07-2015, MK, tag emdna-V10-01-24 181 10-07-2015, MK, tag emdna-V10-01-24 1017 - G4DNA Processes : correct setup of energy b 182 - G4DNA Processes : correct setup of energy boundaries 1018 - G4DNAElectronHoleRecombination remove verbo 183 - G4DNAElectronHoleRecombination remove verbose 1019 - G4DNADingfelderChargeDecreaseModel: add hol 184 - G4DNADingfelderChargeDecreaseModel: add hole creation 1020 - G4DNAEmfietzoglouXModel: specify energy bou 185 - G4DNAEmfietzoglouXModel: specify energy boundaries in constructor 1021 186 1022 08-07-2015, MK, tag emdna-V10-01-23 187 08-07-2015, MK, tag emdna-V10-01-23 1023 - G4ITLeadingTracks added 188 - G4ITLeadingTracks added 1024 - G4ITSteppingVerbose added 189 - G4ITSteppingVerbose added 1025 - G4IosFlagsSaver added 190 - G4IosFlagsSaver added 1026 - G4VITSteppingVerbose & G4ITSteppingVerbose << 191 - G4VITSteppingVerbose & G4ITSteppingVerbose added 1027 * new UI command /chem/tracking/verbose 1,2 << 192 * new UI command /chem/tracking/verbose 1,2,3 ... 1028 - G4MoleculeDefinition: 193 - G4MoleculeDefinition: 1029 ::SetFormatedName added 194 ::SetFormatedName added 1030 ::NewConfiguration methods added 195 ::NewConfiguration methods added 1031 ::NewConfiguration added 196 ::NewConfiguration added 1032 ::AddDecayChannel per G4MolecularConfigurat 197 ::AddDecayChannel per G4MolecularConfiguration or conf label added 1033 And replace ::AddDecayChannel for a molecul 198 And replace ::AddDecayChannel for a molecule model 1034 ::Finalize added 199 ::Finalize added 1035 - G4MolecularConfiguration: << 200 - G4MolecularConfiguration: 1036 * new configuration can be defined by label 201 * new configuration can be defined by labels 1037 * Add Finalize method and add exception if 202 * Add Finalize method and add exception if attempt to modified 1038 the G4MolecularConfiguration is done after 203 the G4MolecularConfiguration is done after finalization 1039 - G4MolecularDissociationChannel & G4DNAMolec << 204 - G4MolecularDissociationChannel & G4DNAMolecularReactionTable & 1040 G4DNAMolecularEncounterStepper use G4Molecula << 205 G4DNAMolecularEncounterStepper use G4MolecularConfiguration rather 1041 than molecule models 206 than molecule models 1042 - G4Molecule add constructor where only G4Mol 207 - G4Molecule add constructor where only G4MolecularConfiguration is specified 1043 - G4Scheduler : remove entirely track specifi 208 - G4Scheduler : remove entirely track specification from this class 1044 - G4ITXProcess : deal with tracks 209 - G4ITXProcess : deal with tracks 1045 - G4ITTrackingManager is a "service" to start 210 - G4ITTrackingManager is a "service" to start and end tracking 1046 - G4DNAElectronHoleRecombination added 211 - G4DNAElectronHoleRecombination added 1047 212 1048 06-07-2015, Shogo Okada, SI, tag emdna-V10-01 213 06-07-2015, Shogo Okada, SI, tag emdna-V10-01-22 1049 - G4DNAEmfietzoglouIonisationModel: removed c << 214 - G4DNAEmfietzoglouIonisationModel: removed condition for 1050 fasterCode usage on shell selection. 215 fasterCode usage on shell selection. 1051 216 1052 26-06-2015, MK 217 26-06-2015, MK 1053 - G4DNAIonElasticModel: modify "validated" to << 218 - G4DNAIonElasticModel: modify "validated" to "activated" in 1054 warning message description 219 warning message description 1055 220 1056 16-06-205, MK 221 16-06-205, MK 1057 - Add G4Scheduler::GetGun() 222 - Add G4Scheduler::GetGun() 1058 223 1059 16-06-2015, MK, tag emdna-V10-01-21 224 16-06-2015, MK, tag emdna-V10-01-21 1060 - G4DNAElastic.cc : add elseif(name == ... 225 - G4DNAElastic.cc : add elseif(name == ... 1061 - G4DNAIonElasticModel: clean and fix double 226 - G4DNAIonElasticModel: clean and fix double free 1062 227 1063 12-06-2015, MK, tag emdna-V10-01-20 228 12-06-2015, MK, tag emdna-V10-01-20 1064 - remove virtual keyword from G4IT::GetPositi 229 - remove virtual keyword from G4IT::GetPosition() 1065 230 1066 04-06-2015, MK 231 04-06-2015, MK 1067 - just cosmetics 232 - just cosmetics 1068 - remove virtual keyword from G4IT::operator[ 233 - remove virtual keyword from G4IT::operator[] 1069 234 1070 26-05-2015, Robert Hatcher, tag emdna-V10-01- 235 26-05-2015, Robert Hatcher, tag emdna-V10-01-19 1071 - Remove unnecessary "using namespace std" fr 236 - Remove unnecessary "using namespace std" from various headers 1072 that causes problems w/ G4AnyMethod & G4Gen 237 that causes problems w/ G4AnyMethod & G4GenericPhysicsList 1073 when using clang and/or vc12 238 when using clang and/or vc12 1074 - Fully qualify std::string elsewhere as need 239 - Fully qualify std::string elsewhere as needed to adjust 1075 240 1076 22-05-2015, John Allison, tag emdna-V10-01-18 241 22-05-2015, John Allison, tag emdna-V10-01-18 1077 - G4ITTrackHolder.cc: Replaced "G4Threading:: 242 - G4ITTrackHolder.cc: Replaced "G4Threading::IsWorkerThread() == false" by 1078 "G4Threading::IsMasterThread()". 243 "G4Threading::IsMasterThread()". 1079 244 1080 17-05-2015, MK, tag emdna-V10-01-17 245 17-05-2015, MK, tag emdna-V10-01-17 1081 - G4DNABornIonisationModel1/2 & G4DNABornExci 246 - G4DNABornIonisationModel1/2 & G4DNABornExcitationModel2: remove unused variables 1082 - Correct sources.cmake 247 - Correct sources.cmake 1083 - Born headears: includes both model versions << 248 - Born headears: includes both model versions when proxy header is included 1084 249 1085 16-05-2015, MK, tag emdna-V10-01-16 250 16-05-2015, MK, tag emdna-V10-01-16 1086 - Add G4DNAEmfietzoglouExcitationModel 251 - Add G4DNAEmfietzoglouExcitationModel 1087 - Add G4DNAEmfietzoglouIonisationModel 252 - Add G4DNAEmfietzoglouIonisationModel 1088 - Add G4DNAUeharaScreenedRutherfordElasticMod 253 - Add G4DNAUeharaScreenedRutherfordElasticModel 1089 - Add G4DNABornIonisationModel2 (temporary) 254 - Add G4DNABornIonisationModel2 (temporary) 1090 - Add G4DNABornExcitationModel2 (temporary) 255 - Add G4DNABornExcitationModel2 (temporary) 1091 256 1092 15-05-2015, MK, tag emdna-V10-01-15 257 15-05-2015, MK, tag emdna-V10-01-15 1093 - Postpone G4DNASmoluchowskiDiffusion until c 258 - Postpone G4DNASmoluchowskiDiffusion until c++11 is adopted 1094 259 1095 14-05-2015, MK, tag emdna-V10-01-14 260 14-05-2015, MK, tag emdna-V10-01-14 1096 - G4DNASmoluchowskiDiffusion: std::sqrt -> sq 261 - G4DNASmoluchowskiDiffusion: std::sqrt -> sqrt 1097 262 1098 14-05-2015, MK, tag emdna-V10-01-13 263 14-05-2015, MK, tag emdna-V10-01-13 1099 - G4DNASmoluchowskiDiffusion: try to solve co 264 - G4DNASmoluchowskiDiffusion: try to solve compilation error 1100 - G4ITReaction: try to solve compilation erro 265 - G4ITReaction: try to solve compilation error 1101 266 1102 12-05-2015, MK, tag emdna-V10-01-12 267 12-05-2015, MK, tag emdna-V10-01-12 1103 - G4DNASmoluchowskiDiffusion: try to solve co 268 - G4DNASmoluchowskiDiffusion: try to solve compilation error 1104 269 1105 12-05-2015, MK, tag emdna-V10-01-11 270 12-05-2015, MK, tag emdna-V10-01-11 1106 - Add G4DNASmoluchowskiDiffusion to the build 271 - Add G4DNASmoluchowskiDiffusion to the build tree 1107 272 1108 11-05-2015, MK, tag emdna-V10-01-10 273 11-05-2015, MK, tag emdna-V10-01-10 1109 - G4DNABornExcitationModel: 274 - G4DNABornExcitationModel: 1110 +Add GetPartialCrossSection 275 +Add GetPartialCrossSection 1111 +Code cleaning 276 +Code cleaning 1112 - G4DNAMillerGreenExcitationModel: 277 - G4DNAMillerGreenExcitationModel: 1113 +Add GetPartialCrossSection 278 +Add GetPartialCrossSection 1114 - G4DNAChemistryManager::GetValue(...) added 279 - G4DNAChemistryManager::GetValue(...) added 1115 280 1116 02-05-2015, MK 281 02-05-2015, MK 1117 - Update G4TrackState & related classes 282 - Update G4TrackState & related classes 1118 - G4DNABrownianTransportation: << 283 - G4DNABrownianTransportation: 1119 +Add constructor & destructor to G4Brownian << 284 +Add constructor & destructor to G4BrownianAction 1120 +comment useless method 285 +comment useless method 1121 - G4Scheduler: << 286 - G4Scheduler: 1122 +Add fStopTime+Watched times+PrintWhyDoYouS << 287 +Add fStopTime+Watched times+PrintWhyDoYouStop method (code was existing before) 1123 +remove fTmpEndTime << 288 +remove fTmpEndTime 1124 +Add CanICarryOn 289 +Add CanICarryOn 1125 - add G4DNASmoluchowskiDiffusion *PRELIMINARY 290 - add G4DNASmoluchowskiDiffusion *PRELIMINARY* 1126 291 1127 18-03-2015, MK, tag emdna-V10-01-08 292 18-03-2015, MK, tag emdna-V10-01-08 1128 - Same as before, just add the missing Histor 293 - Same as before, just add the missing History file 1129 294 1130 18-03-2015, MK, tag emdna-V10-01-07 295 18-03-2015, MK, tag emdna-V10-01-07 1131 - G4UserTimeStepAction::UserReactionAction : 296 - G4UserTimeStepAction::UserReactionAction : vector of products becomes a pointer 1132 instead of a reference 297 instead of a reference 1133 298 1134 12-02-2015, MK, tag emdna-V10-01-06 299 12-02-2015, MK, tag emdna-V10-01-06 1135 - G4ITReaction: Remove "gAll" introduced for 300 - G4ITReaction: Remove "gAll" introduced for testing 1136 - G4ITModelProcessor: Remove "assert" introdu 301 - G4ITModelProcessor: Remove "assert" introduced for testing 1137 - G4ITTransportation: Remove extra parenthesi << 302 - G4ITTransportation: Remove extra parenthesis in the undef of PrepareState 1138 303 1139 11-02-2015, MK, tag emdna-V10-01-05 304 11-02-2015, MK, tag emdna-V10-01-05 1140 - Fix reproductibility of the chemistry modul 305 - Fix reproductibility of the chemistry module 1141 - Fix the "no reaction table found" bug: G4IT 306 - Fix the "no reaction table found" bug: G4ITReaction class created 1142 - G4shared_ptr refers to std::shared_ptr when 307 - G4shared_ptr refers to std::shared_ptr when C++11 is activated 1143 308 1144 16-01-2015, SI, tag emdna-V10-01-04 309 16-01-2015, SI, tag emdna-V10-01-04 1145 - added Fe56 into G4DNARuddIonisationExtended 310 - added Fe56 into G4DNARuddIonisationExtendedModel 1146 311 1147 14-12-2014, MK, tag emdna-V10-01-03 312 14-12-2014, MK, tag emdna-V10-01-03 1148 - BornIonisation: correct array cleaning 313 - BornIonisation: correct array cleaning 1149 - ScreenRutherfordElastic: correct retrieval << 314 - ScreenRutherfordElastic: correct retrieval of water density 1150 315 1151 13-12-2014, SI, tag emdna-V10-01-02 316 13-12-2014, SI, tag emdna-V10-01-02 1152 - Added elastic model by H. Tran. 317 - Added elastic model by H. Tran. 1153 318 1154 12-12-2014, G.Cosmo, tag emdna-V10-01-01 319 12-12-2014, G.Cosmo, tag emdna-V10-01-01 1155 - Explicitly initialise to zero TLS pointers 320 - Explicitly initialise to zero TLS pointers in G4KDNode.hh and G4ITFinder.icc 1156 to allow for compilation on Linux/clang-3.5 321 to allow for compilation on Linux/clang-3.5. 1157 322 1158 05-12-2014, G.Cosmo, tag emdna-V10-01-00 323 05-12-2014, G.Cosmo, tag emdna-V10-01-00 1159 - Corrected sources.cmake in management and m 324 - Corrected sources.cmake in management and molecules/management, to 1160 include missing files: 325 include missing files: 1161 G4ITTransportationManager.icc 326 G4ITTransportationManager.icc 1162 G4KDNode.icc 327 G4KDNode.icc 1163 G4KDTree.icc 328 G4KDTree.icc 1164 G4MoleculeFinder.hh 329 G4MoleculeFinder.hh 1165 330 1166 01-12-2014, MK, tag emdna-V10-00-63 331 01-12-2014, MK, tag emdna-V10-00-63 1167 - Temporary fix for avoiding bad relocation o 332 - Temporary fix for avoiding bad relocation of Brownian particles 1168 It slows the computation by forcing the Brown 333 It slows the computation by forcing the Brownian particles to stop at the volumes' boundaries 1169 - Transform fStopAndAlive to fStopAndKill in 334 - Transform fStopAndAlive to fStopAndKill in G4DNABrownianTransportation 1170 when the particle has reached a boundary 335 when the particle has reached a boundary 1171 336 1172 28-11-2014, MK, tag emdna-V10-00-62 337 28-11-2014, MK, tag emdna-V10-00-62 1173 - Retag 338 - Retag 1174 339 1175 28-11-2014, MK, tag emdna-V10-00-61 340 28-11-2014, MK, tag emdna-V10-00-61 1176 - Fix chemistry initialization in standalone 341 - Fix chemistry initialization in standalone 1177 - Fix Brownian navigation 342 - Fix Brownian navigation 1178 - Some fixes related to scheduler 343 - Some fixes related to scheduler 1179 - Rename macro commands to reflect usage of s 344 - Rename macro commands to reflect usage of scheduler 1180 - Enhance comments 345 - Enhance comments 1181 346 1182 24-11-2014, MK, tag emdna-V10-00-60 347 24-11-2014, MK, tag emdna-V10-00-60 1183 - Remove a useless but also fatal (when chemi 348 - Remove a useless but also fatal (when chemistry is not activated) exception 1184 349 1185 24-11-2014, MK, tag emdna-V10-00-59 350 24-11-2014, MK, tag emdna-V10-00-59 1186 - Enhance doxygen comments in G4DNABrownianTr 351 - Enhance doxygen comments in G4DNABrownianTransportation 1187 - Remove useless verbose 352 - Remove useless verbose 1188 - Try to compile on all platforms 353 - Try to compile on all platforms 1189 - Correct initialization of G4DNAChemistryMan 354 - Correct initialization of G4DNAChemistryManager 1190 - Simplify initialization of chemistry from u 355 - Simplify initialization of chemistry from user applications 1191 Just registering constructor is enough to i 356 Just registering constructor is enough to initialized the chemistry 1192 357 1193 24-11-2014, MK, tag emdna-V10-00-58 358 24-11-2014, MK, tag emdna-V10-00-58 1194 - G4FastList: remove all friend declarations 359 - G4FastList: remove all friend declarations 1195 360 1196 22-11-2014, MK, tag emdna-V10-00-57 361 22-11-2014, MK, tag emdna-V10-00-57 1197 - Another attempt to compile G4FastList on al 362 - Another attempt to compile G4FastList on all platforms 1198 363 1199 22-11-2014, MK, tag emdna-V10-00-56 364 22-11-2014, MK, tag emdna-V10-00-56 1200 - Attempt to compile G4FastList on all platfo 365 - Attempt to compile G4FastList on all platforms 1201 366 1202 21-11-2014, MK, tag emdna-V10-00-55 367 21-11-2014, MK, tag emdna-V10-00-55 1203 - Attempt to compile G4FastList with clang 368 - Attempt to compile G4FastList with clang 1204 369 1205 21-11-2014, MK, tag emdna-V10-00-54 370 21-11-2014, MK, tag emdna-V10-00-54 1206 - Put back G4DNABrownianTransportation::fUseM 371 - Put back G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary 1207 to true as long as the small distances to bou << 372 to true as long as the small distances to boundaries sent back by the navigator 1208 are not understood 373 are not understood 1209 - Update G4ITNavigator2 to the G4Navigator of 374 - Update G4ITNavigator2 to the G4Navigator of John 1210 375 1211 21-11-2014, MK, tag emdna-V10-00-53 376 21-11-2014, MK, tag emdna-V10-00-53 1212 - Attempt to solve the 'No track found' bug b << 377 - Attempt to solve the 'No track found' bug by using G4FastList and 1213 G4ManyFastLists - A 'list watcher' is added 378 G4ManyFastLists - A 'list watcher' is added 1214 - G4DNABrownianTransportation::fUseMaximumTim 379 - G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary 1215 is false by default --> uses the random time << 380 is false by default --> uses the random time computation for crossing 1216 boundaries 381 boundaries 1217 382 1218 20-11-2014, SI, tag emdna-V10-00-52 383 20-11-2014, SI, tag emdna-V10-00-52 1219 - Improved error message for missing data in 384 - Improved error message for missing data in PW elastic model 1220 385 1221 08-11-2014, MK, tag emdna-V10-00-51 386 08-11-2014, MK, tag emdna-V10-00-51 1222 - Add an exception in G4MoleculeTable::GetMod 387 - Add an exception in G4MoleculeTable::GetModel/GetDefinition 1223 when the asked item is not found 388 when the asked item is not found 1224 389 1225 03-11-2014 MK, tag emdna-V10-00-50 390 03-11-2014 MK, tag emdna-V10-00-50 1226 - correct track creation by G4MoleculeGunMess 391 - correct track creation by G4MoleculeGunMessenger 1227 392 1228 03-11-2014 MK, tag emdna-V10-00-49 393 03-11-2014 MK, tag emdna-V10-00-49 1229 - Remove useless classes 394 - Remove useless classes 1230 - Correct a bug in G4MoleculeGun 395 - Correct a bug in G4MoleculeGun 1231 396 1232 28-10-2014 PA, tag emdna-V10-00-48 397 28-10-2014 PA, tag emdna-V10-00-48 1233 - correct compilation warnings 398 - correct compilation warnings 1234 399 1235 28-10-2014 PA, tag emdna-V10-00-47 400 28-10-2014 PA, tag emdna-V10-00-47 1236 - correct compilation warnings 401 - correct compilation warnings 1237 402 1238 28-10-2014 PA, tag emdna-V10-00-46 403 28-10-2014 PA, tag emdna-V10-00-46 1239 - correction in sources.cmake 404 - correction in sources.cmake 1240 405 1241 28-10-2014 PA, tag emdna-V10-00-45 406 28-10-2014 PA, tag emdna-V10-00-45 1242 - retag to add LEPTS 407 - retag to add LEPTS 1243 408 1244 28-10-2014 PA, tag emdna-V10-00-44 409 28-10-2014 PA, tag emdna-V10-00-44 1245 - add LEPTS 410 - add LEPTS 1246 411 1247 25-10-2014 MK, tag emdna-V10-00-43 412 25-10-2014 MK, tag emdna-V10-00-43 1248 - remove useless G4VITScheduler 413 - remove useless G4VITScheduler 1249 414 1250 25-10-2014 MK, tag emdna-V10-00-42 415 25-10-2014 MK, tag emdna-V10-00-42 1251 - correct warnings 416 - correct warnings 1252 417 1253 24-10-2014 MK, tag emdna-V10-00-41 418 24-10-2014 MK, tag emdna-V10-00-41 1254 - G4ITTimeStepper-->G4VScheduler 419 - G4ITTimeStepper-->G4VScheduler 1255 - G4ITStepManager-->G4ITScheduler 420 - G4ITStepManager-->G4ITScheduler 1256 - G4ITStepManager-->G4ITSchedulerMessenger 421 - G4ITStepManager-->G4ITSchedulerMessenger 1257 - G4AllITManager & G4ITManager deleted 422 - G4AllITManager & G4ITManager deleted 1258 - G4ITFinder added 423 - G4ITFinder added 1259 - G4VITTrackHolder added 424 - G4VITTrackHolder added 1260 - G4ITTrackHolder implemented 425 - G4ITTrackHolder implemented 1261 - code cleaned + useless classes removed 426 - code cleaned + useless classes removed 1262 427 1263 24-10-2014 MK, tag emdna-V10-00-40 428 24-10-2014 MK, tag emdna-V10-00-40 1264 - G4ITStepManager: remove verbose at closure 429 - G4ITStepManager: remove verbose at closure time 1265 430 1266 21-10-2014 MK, tag emdna-V10-00-39 431 21-10-2014 MK, tag emdna-V10-00-39 1267 - try to solve crash at closure time 432 - try to solve crash at closure time 1268 433 1269 21-10-2014 MK, tag emdna-V10-00-38 434 21-10-2014 MK, tag emdna-V10-00-38 1270 - remove G4MolecularConfiguration from the ma 435 - remove G4MolecularConfiguration from the manager's 1271 table when deleted 436 table when deleted 1272 - update disclaimer 437 - update disclaimer 1273 438 1274 17-10-2014 MK, tag emdna-V10-00-37 439 17-10-2014 MK, tag emdna-V10-00-37 1275 - clean code 440 - clean code 1276 - G4ITStepManager: one can ask why simulation 441 - G4ITStepManager: one can ask why simulation stops 1277 - remove useless verbose 442 - remove useless verbose 1278 443 1279 17-10-2014 MK, tag emdna-V10-00-36 444 17-10-2014 MK, tag emdna-V10-00-36 1280 - Call G4ITTimeStepper in ChemMan::InitMaster 445 - Call G4ITTimeStepper in ChemMan::InitMaster 1281 - Remove inappropriate method in G4ITTrackHol 446 - Remove inappropriate method in G4ITTrackHolder 1282 - G4DNASecondOrderReaction uses G4ITTimeStepp 447 - G4DNASecondOrderReaction uses G4ITTimeStepper::GetTimeStep 1283 448 1284 10-10-2014 MK, tag emdna-V10-00-35 449 10-10-2014 MK, tag emdna-V10-00-35 1285 Avoid use of std::map at the applicatio 450 Avoid use of std::map at the application level in TimeStepAction 1286 451 1287 07-10-2014 MK, tag emdna-V10-00-34 452 07-10-2014 MK, tag emdna-V10-00-34 1288 G4MolecularReactionTable : translate fr 453 G4MolecularReactionTable : translate from french to english 1289 G4DNAChemistryManager : remove usage of 454 G4DNAChemistryManager : remove usage of G4ITStepManager 1290 G4ITTimeStepper : use temporally as int 455 G4ITTimeStepper : use temporally as interface to G4ITStepManager 1291 456 1292 07-10-2014 MK, tag emdna-V10-00-33 457 07-10-2014 MK, tag emdna-V10-00-33 1293 Initialize G4ITStepManager in G4DNAChem 458 Initialize G4ITStepManager in G4DNAChemistryManager 1294 459 1295 17-09-2014 MK, tag emdna-V10-00-32 460 17-09-2014 MK, tag emdna-V10-00-32 1296 Add G4ITStepManager + messenger 461 Add G4ITStepManager + messenger 1297 Tag before architecture change 462 Tag before architecture change 1298 463 1299 12-07-2014 SI, tag emdna-V10-00-31 464 12-07-2014 SI, tag emdna-V10-00-31 1300 Removed obsolete class for electr 465 Removed obsolete class for electron excitation 1301 466 1302 27-06-2014 GCosmo, tag emdna-V10-00-30 467 27-06-2014 GCosmo, tag emdna-V10-00-30 1303 - Get rid of obsolete 'register' keywor 468 - Get rid of obsolete 'register' keyword in code. 1304 469 1305 05-06-2014 SI, tag emdna-V10-00-29 470 05-06-2014 SI, tag emdna-V10-00-29 1306 - added include of <deque> in G4DNAMill 471 - added include of <deque> in G4DNAMillerGreenExcitationModel.hh 1307 - updated G4DNAIonisation and G4D << 472 - updated G4DNAIonisation and G4DNARuddIonisationExtendModel for 1308 G4GenericIon usage 473 G4GenericIon usage 1309 - requires G4EMLOW6.39 474 - requires G4EMLOW6.39 1310 475 1311 04-06-2014 MK, tag emdna-V10-00-28 476 04-06-2014 MK, tag emdna-V10-00-28 1312 Remove directory management/include/imp 477 Remove directory management/include/impl 1313 Prepare for release 478 Prepare for release 1314 479 1315 04-06-2014 MK, tag emdna-V10-00-27 480 04-06-2014 MK, tag emdna-V10-00-27 1316 Resolve several defects pointed o 481 Resolve several defects pointed out by coverity 1317 Add interface G4ITTimeStepper 482 Add interface G4ITTimeStepper 1318 Avoid usage of molecule iterators 483 Avoid usage of molecule iterators as pointers 1319 484 1320 03-06-2014 SI, tag emdna-V10-00-26 485 03-06-2014 SI, tag emdna-V10-00-26 1321 Switched to DNAion for Si in 486 Switched to DNAion for Si in G4DNAGenericIonsManager 1322 487 1323 28-05-2014 VI, SI tag emdna-V10-00-25 488 28-05-2014 VI, SI tag emdna-V10-00-25 1324 Added G4DNABornAngle and G4DN 489 Added G4DNABornAngle and G4DNARuddAngle generators; 1325 Ionisation models switch to u 490 Ionisation models switch to use angular generator 1326 interface 491 interface 1327 492 1328 12.05.2014 MK, tag emdna-V10-00-24 493 12.05.2014 MK, tag emdna-V10-00-24 1329 Try to remove warnings 4 494 Try to remove warnings 4 1330 495 1331 12.05.2014 MK, tag emdna-V10-00-23 496 12.05.2014 MK, tag emdna-V10-00-23 1332 Try to remove warnings 3 497 Try to remove warnings 3 1333 498 1334 12.05.2014 MK, tag emdna-V10-00-22 499 12.05.2014 MK, tag emdna-V10-00-22 1335 Try to remove warnings 2 500 Try to remove warnings 2 1336 501 1337 12.05.2014 MK, tag emdna-V10-00-21 502 12.05.2014 MK, tag emdna-V10-00-21 1338 Try to remove warnings 503 Try to remove warnings 1339 504 1340 09.05.2014 S. Incerti, tag emdna-V10-00-20 505 09.05.2014 S. Incerti, tag emdna-V10-00-20 1341 Added Si to G4DNARuddIonisationEx << 506 Added Si to G4DNARuddIonisationExtendedModel 1342 on behalf of Z. Francis 507 on behalf of Z. Francis 1343 G4EMLOW6.38 needed 508 G4EMLOW6.38 needed 1344 509 1345 07-04-2014 SI tag emdna-V10-00-19 510 07-04-2014 SI tag emdna-V10-00-19 1346 Changed faster method interpolation in 511 Changed faster method interpolation in 1347 G4DNABornIonisationModel << 512 G4DNABornIonisationModel 1348 513 1349 04-04-2014 G.Cosmo tag emdna-V10-00-1 514 04-04-2014 G.Cosmo tag emdna-V10-00-18 1350 Removed problematic #define in G4TrackS 515 Removed problematic #define in G4TrackState.hh causing errors on 1351 Windows for overriding of system keywor 516 Windows for overriding of system keyword 'Handle'... 1352 Corrected order of inclusion of some he 517 Corrected order of inclusion of some headers and use of <>/"". 1353 518 1354 04-04-2014 MK tag emdna-V10-00-17 519 04-04-2014 MK tag emdna-V10-00-17 1355 Try to solve warnings when G4VERBOSE is 520 Try to solve warnings when G4VERBOSE is off 1356 521 1357 02-04-2014 MK tag emdna-V10 522 02-04-2014 MK tag emdna-V10-00-16 1358 G4ITSafetyHelper: Force usage of G4Path 523 G4ITSafetyHelper: Force usage of G4PathFinder for now 1359 524 1360 02-04-2014 MK tag emdna-V10 525 02-04-2014 MK tag emdna-V10-00-15 1361 Add preprocessor flags on files in dev 526 Add preprocessor flags on files in dev to prevent build errors with gmake 1362 527 1363 02-04-2014 MK tag emdna-V10 528 02-04-2014 MK tag emdna-V10-00-14 1364 - on mac: template parameter declared a 529 - on mac: template parameter declared as a friend class is supported only with c++11 which causes a warning 1365 -> this part is withdrawn for now 530 -> this part is withdrawn for now 1366 531 1367 02-04-2014 MK tag emdna-V10 532 02-04-2014 MK tag emdna-V10-00-13 1368 - version 2 : try fixing the build erro 533 - version 2 : try fixing the build error on mac 1369 534 1370 02-04-2014 MK tag emdna-V10 535 02-04-2014 MK tag emdna-V10-00-12 1371 - version 1 : try to fix build errors a 536 - version 1 : try to fix build errors and warnings on mac 1372 537 1373 02-04-2014 MK tag emdna-V10 538 02-04-2014 MK tag emdna-V10-00-11 1374 - try to fix build error on windows pla 539 - try to fix build error on windows platform - 3 1375 (G4MemStat & G4MolecularConfiguration) 540 (G4MemStat & G4MolecularConfiguration) 1376 541 1377 02-04-2014 MK tag emdna-V10 542 02-04-2014 MK tag emdna-V10-00-10 1378 - try to fix build error on windows pla 543 - try to fix build error on windows platform - 2 1379 (problem coming from having as a friend 544 (problem coming from having as a friend class a template argument) 1380 545 1381 02-04-2014 MK tag emdna-V10 546 02-04-2014 MK tag emdna-V10-00-09 1382 - try to fix build error on windows pla << 547 - try to fix build error on windows platform 1383 548 1384 01-04-2014 MK tag emdna-V10 549 01-04-2014 MK tag emdna-V10-00-08 1385 - G4DNAChemistryManager.cc: remove a G4 550 - G4DNAChemistryManager.cc: remove a G4cout in destructor causing a crash in test60 1386 - G4TrackState.hh: change 'typename' to 551 - G4TrackState.hh: change 'typename' to 'class' in template argument of typewrapper 1387 552 1388 01-04-2014 MK tag emdna-V10 553 01-04-2014 MK tag emdna-V10-00-07 1389 - reset CMakeLists.txt 554 - reset CMakeLists.txt 1390 555 1391 01-04-2014 MK tag emdna-V10 556 01-04-2014 MK tag emdna-V10-00-06 1392 - update chemistry 557 - update chemistry 1393 558 1394 01-04-2014 SI tag emdna-V10-00-05 559 01-04-2014 SI tag emdna-V10-00-05 1395 - Modified calculation of secondary kin 560 - Modified calculation of secondary kinetic for fast code 1396 561 1397 27-03-2014 G.Cosmo tag emdna-V10-00-04 562 27-03-2014 G.Cosmo tag emdna-V10-00-04 1398 - Corrected inclusion order of headers 563 - Corrected inclusion order of headers and forward declations 1399 in G4MolecularConfiguration. 564 in G4MolecularConfiguration. 1400 - Corrected typo in DLL import flag in 565 - Corrected typo in DLL import flag in G4DNAWaterDissociationDisplacer.hh. 1401 566 1402 25-03-2014 VS, SI tag emdna-V10-00-03 567 25-03-2014 VS, SI tag emdna-V10-00-03 1403 - Added several clear() to vectors for 568 - Added several clear() to vectors for MT 1404 569 1405 17-03-2014 SI tag emdna-V10-00-02 570 17-03-2014 SI tag emdna-V10-00-02 1406 - Modified G4DNAChampionElasticModel.cc << 571 - Modified G4DNAChampionElasticModel.cc to read 1407 high precision diff. cumulated 572 high precision diff. cumulated cross section 1408 to be used with G4EMLOW6.36 573 to be used with G4EMLOW6.36 1409 574 1410 12-12-2013 M.K tag emdna-V10-00-01 575 12-12-2013 M.K tag emdna-V10-00-01 1411 - G4DNAMolecularMaterial: Remove unused 576 - G4DNAMolecularMaterial: Remove unused variable 1412 577 1413 12-12-2013 M.K tag emdna-V10-00-00 578 12-12-2013 M.K tag emdna-V10-00-00 1414 - G4DNAMolecularMaterial is modified to << 579 - G4DNAMolecularMaterial is modified to prevent segmentation fault in case 1415 a model is not created at initialisatio 580 a model is not created at initialisation time 1416 581 1417 21-11-2013 V.I. tag emdna-V09-06-22 582 21-11-2013 V.I. tag emdna-V09-06-22 1418 - G4ITStepProcessor2 - removed ob 583 - G4ITStepProcessor2 - removed obsolete unused header 1419 584 1420 01-11-2013 M.K tag emdna-V09-06-21 585 01-11-2013 M.K tag emdna-V09-06-21 1421 - Correct incorrect singleton che 586 - Correct incorrect singleton check introduced in previous tag 1422 587 1423 01-11-2013 M.K tag emdna-V09-06-20 588 01-11-2013 M.K tag emdna-V09-06-20 1424 - Prepare for release bis 589 - Prepare for release bis 1425 590 1426 01-11-2013 M.K tag emdna-V09-06-19 591 01-11-2013 M.K tag emdna-V09-06-19 1427 - Prepare for release 592 - Prepare for release 1428 593 1429 10-10-2013 M.K. tag emdna-V09-06-18 594 10-10-2013 M.K. tag emdna-V09-06-18 1430 - Remove G4VERBOSE testing in G4D 595 - Remove G4VERBOSE testing in G4DNABrownianTransportation::BuildPhysicsTable 1431 596 1432 06-10-2013 M.K. tag emdna-V09-06-17 597 06-10-2013 M.K. tag emdna-V09-06-17 1433 - Same as before once again 598 - Same as before once again 1434 599 1435 03-10-2013 M.K. tag emdna-V09-06-16 600 03-10-2013 M.K. tag emdna-V09-06-16 1436 - Same as before 601 - Same as before 1437 602 1438 03-10-2013 M.K. tag emdna-V09-06-15 603 03-10-2013 M.K. tag emdna-V09-06-15 1439 - Improve MT compatibility 604 - Improve MT compatibility 1440 - Enhance G4DNAChemistryManager to be t << 605 - Enhance G4DNAChemistryManager to be the main interface used 1441 by the user - stage 1 606 by the user - stage 1 1442 607 1443 14-09-2013 M.Asai tag emdna-V09-06-14 608 14-09-2013 M.Asai tag emdna-V09-06-14 1444 G4VProcess::SubtractNumberOfInter 609 G4VProcess::SubtractNumberOfInteractionLengthLeft() is no longer 1445 a virtual methood since v9.6 and 610 a virtual methood since v9.6 and thus it must not be overwritten 1446 with virtual keyword in G4VITProc 611 with virtual keyword in G4VITProcess. 1447 612 1448 12-09-2013 M.K. tag emdna-V09-06-13 613 12-09-2013 M.K. tag emdna-V09-06-13 1449 Correction of an inadvertent modificati 614 Correction of an inadvertent modification introduced in previous tag 1450 615 1451 12-09-2013 M.K. tag emdna-V09-06-12 616 12-09-2013 M.K. tag emdna-V09-06-12 1452 Correct bound checks in G4ITManager.icc 617 Correct bound checks in G4ITManager.icc 1453 618 1454 16-08-2013 S.I. tag emdna-V09-06-11 619 16-08-2013 S.I. tag emdna-V09-06-11 1455 Adapted G4DNAGenericIonsManager to use 620 Adapted G4DNAGenericIonsManager to use of G4DNAIons 1456 621 1457 16-08-2013 S.I. tag emdna-V09-06-10 622 16-08-2013 S.I. tag emdna-V09-06-10 1458 Added G4DNAIons 623 Added G4DNAIons 1459 624 1460 25-06-2013 M.K. tag emdna-V09-06-09 625 25-06-2013 M.K. tag emdna-V09-06-09 1461 G4MoleculeID: Rectify initialization 626 G4MoleculeID: Rectify initialization 1462 G4MoleculeCounter: Automatic switch bet << 627 G4MoleculeCounter: Automatic switch between unique_ptr or 1463 auto_ptr according to c++ std version 628 auto_ptr according to c++ std version 1464 629 1465 11-06-2013 G.Cosmo tag emdna-V09-06- 630 11-06-2013 G.Cosmo tag emdna-V09-06-08 1466 Corrected static initialisation i 631 Corrected static initialisation in G4VMolecularDecayDisplacer 1467 for problem accidentally introduc 632 for problem accidentally introduced in previous tag. 1468 633 1469 11-06-2013 G.Cosmo tag emdna-V09-06- 634 11-06-2013 G.Cosmo tag emdna-V09-06-07 1470 Cleanup from automatic changes fo 635 Cleanup from automatic changes for MT in classes G4Molecule, 1471 G4VMolecularDecayDisplacer, G4IT, 636 G4VMolecularDecayDisplacer, G4IT, G4ITModelProcessor, G4VITProcess, 1472 G4ITTransportation, G4DNAChemistr 637 G4ITTransportation, G4DNAChemistryManager, and porting MT 1473 compilation on Windows. 638 compilation on Windows. 1474 639 1475 06-06-2013 S.I. tag emdna-V09-06- 640 06-06-2013 S.I. tag emdna-V09-06-06 1476 Updated G4DNABornIonisationModel 641 Updated G4DNABornIonisationModel for speedup option 1477 Requires G4EMLOW version 6.33 642 Requires G4EMLOW version 6.33 1478 643 1479 25-05-2013 M.K. tag emdna-V09-06- 644 25-05-2013 M.K. tag emdna-V09-06-05 1480 *Fix warning compilation in G4KDM 645 *Fix warning compilation in G4KDMap for specific gcc version 1481 646 1482 24-05-2013 M.K. tag emdna-V09-06- 647 24-05-2013 M.K. tag emdna-V09-06-04 1483 * Track state class updated to fi << 648 * Track state class updated to fix compilation errors on mac 1484 but still not in usage 649 but still not in usage 1485 650 1486 23-05-2013 M.K. tag emdna-V09-06- 651 23-05-2013 M.K. tag emdna-V09-06-03 1487 * G4KDMap : try fix error on std: 652 * G4KDMap : try fix error on std:ceil call on windows 1488 653 1489 23-V09-06-03-05-2013 M.K. tag emd 654 23-V09-06-03-05-2013 M.K. tag emdna-V09-06-02 1490 * G4KDMap : used deque::iterator 655 * G4KDMap : used deque::iterator 1491 656 1492 657 1493 22-05-2013 M.K. tag emdna-V09-06- 658 22-05-2013 M.K. tag emdna-V09-06-01 1494 * Correct warning from G4KDTree.cc 659 * Correct warning from G4KDTree.cc 1495 * G4KDMap : pop out elements from map 660 * G4KDMap : pop out elements from map 1496 661 1497 22-05-2013 M.K. tag emdna-V09-06-00 662 22-05-2013 M.K. tag emdna-V09-06-00 1498 * !!! MT !!!! Promoted to thread-global << 663 * !!! MT !!!! Promoted to thread-global storage : 1499 --> G4DNAGenericIonManager << 664 --> G4DNAGenericIonManager 1500 --> G4DNAMolecularMaterial 665 --> G4DNAMolecularMaterial 1501 --> G4DNAMolecularReactionTable 666 --> G4DNAMolecularReactionTable 1502 * G4KDMap added 667 * G4KDMap added 1503 * G4DNASmoluchowskiReactionModel : exce 668 * G4DNASmoluchowskiReactionModel : exception description enhanced 1504 * G4ITTrackingInteractivity : "Initiali << 669 * G4ITTrackingInteractivity : "Initialize()" method added for simplify 1505 initialization of daughter classes << 670 intialization of daughter classes 1506 * G4DNAChemistryManager : AddEmptyLineI << 671 * G4DNAChemistryManager : AddEmptyLineInOuputFile method added 1507 672 1508 12-11-2012 M.K tag emdna-V09-05- 673 12-11-2012 M.K tag emdna-V09-05-35 1509 Remove unnecessary abort() and ex 674 Remove unnecessary abort() and exit(-1) previously introduced to avoid 1510 coverity warnings (rev 64993) 675 coverity warnings (rev 64993) 1511 676 1512 06-11-2012 G.Cosmo tag emdna-V09 677 06-11-2012 G.Cosmo tag emdna-V09-05-34 1513 Minor fixes for porting on AIX; m 678 Minor fixes for porting on AIX; mainly on use of const signature 1514 for objects in maps... 679 for objects in maps... 1515 680 1516 04-11-2012 M.K. tag emdna-V09-05-33 681 04-11-2012 M.K. tag emdna-V09-05-33 1517 G4IT : transform G4ITTrackingInfo 682 G4IT : transform G4ITTrackingInformation pointer to object (rev 64715) 1518 G4ITTrackingManager : get rid of 683 G4ITTrackingManager : get rid of attribute "fVerboseLevel" (rev 64716) 1519 G4ITStepProcessor.cc : correct co 684 G4ITStepProcessor.cc : correct coverity warnings in copy constructor (not used) (rev 64717) 1520 G4ITTransportationManager.hh : pu 685 G4ITTransportationManager.hh : put default constructor as private (rev 64718) 1521 G4VITModel.cc : rename variables 686 G4VITModel.cc : rename variables in copy constructor and assignment operator (------) 1522 G4MolecularDecayChannel.cc : adap 687 G4MolecularDecayChannel.cc : adapt copy constructor to avoid coverity warnings (rev 64719) 1523 G4MoleculeCounter.cc : get rid of 688 G4MoleculeCounter.cc : get rid of duplicated layout (------) 1524 G4DNAMolecularStepByStepModel : a 689 G4DNAMolecularStepByStepModel : add an exception in the assignment operator (rev 64720) 1525 G4ITTrackingManager.hh : remove r 690 G4ITTrackingManager.hh : remove remainders of fVerboseLevel (rev 64722) 1526 Ionisation Models (Born, Rudd, Ru 691 Ionisation Models (Born, Rudd, RuddExtended) : 1527 set fAtomDeexcitation = 0 (re 692 set fAtomDeexcitation = 0 (rev 64723) 1528 add "else" before "if" statem 693 add "else" before "if" statements and 1529 add variables to avoid ma 694 add variables to avoid many checks on particleDefinition. (rev 64724) 1530 dna.files : update files (rev 647 695 dna.files : update files (rev 64725) 1531 696 1532 03-11-2012 S.I. tag emdna-V09-05-32 697 03-11-2012 S.I. tag emdna-V09-05-32 1533 Switched to usage of SetEmModel a 698 Switched to usage of SetEmModel and EmModel in all dna/processes 1534 classes 699 classes 1535 700 1536 24-10-2012 M.K tag emdna-V09 701 24-10-2012 M.K tag emdna-V09-05-31 1537 G4ITNavigator is updated to new i 702 G4ITNavigator is updated to new interface of ReplicaNavigation::ComputeStep 1538 (previously commented) 703 (previously commented) 1539 704 1540 23-10-2012 M.K tag emdna-V09 705 23-10-2012 M.K tag emdna-V09-05-30 1541 Add exception in G4DNASecondOrder 706 Add exception in G4DNASecondOrderReaction 1542 Add carriage return in G4DNASmolu 707 Add carriage return in G4DNASmoluchowskiReaction cc and hh 1543 708 1544 18-10-2012 M.K tag emdna-V09 709 18-10-2012 M.K tag emdna-V09-05-29 1545 Previous tag did not include hist 710 Previous tag did not include history changes 1546 711 1547 18-10-2012 M.K tag emdna-V09 712 18-10-2012 M.K tag emdna-V09-05-28 1548 Remove warning 713 Remove warning 1549 714 1550 17-10-2012 M.K tag emdna-V09 715 17-10-2012 M.K tag emdna-V09-05-27 1551 Correct a typo from previous tag 716 Correct a typo from previous tag 1552 717 1553 17-10-2012 M.K tag emdna-V09 718 17-10-2012 M.K tag emdna-V09-05-26 1554 Correct information in headers 719 Correct information in headers 1555 Rename G4DNADiffustionControlledM 720 Rename G4DNADiffustionControlledModel to G4DNASmoluchowskiReactionModel 1556 G4ITNavigator updated to new inte 721 G4ITNavigator updated to new interface of ReplicaNavigation::ComputeStep. 1557 722 1558 01-10-2012 SI, P.Pater tag emdna-V09 723 01-10-2012 SI, P.Pater tag emdna-V09-05-25 1559 Force kinetic energy to zero for 724 Force kinetic energy to zero for real killings in models. 1560 725 1561 12-07-2012 G.Cosmo tag emdna-V09 726 12-07-2012 G.Cosmo tag emdna-V09-05-24 1562 Explicitly use inclusion of heade 727 Explicitly use inclusion of headers for system of units and physical 1563 constants, in plan to remove impl 728 constants, in plan to remove implicit inclusion from globals.hh. 1564 729 1565 11.07.2012 M.K tag emdna-V09 730 11.07.2012 M.K tag emdna-V09-05-23 1566 Correct warnings introduce in previous 731 Correct warnings introduce in previous tag 1567 732 1568 11.07.2012 M.K tag emdna-V09 733 11.07.2012 M.K tag emdna-V09-05-22 1569 Tag to be proposed 734 Tag to be proposed 1570 735 1571 25.06.2012 M.K tag emdna-V09-05-21 736 25.06.2012 M.K tag emdna-V09-05-21 1572 Fix semantic warning related to f 737 Fix semantic warning related to forward declaration of G4ITNavigator_Lock 1573 Modify molecule's name 738 Modify molecule's name 1574 << 739 1575 21.06.2012 S.I tag emdna-V09-05-20 740 21.06.2012 S.I tag emdna-V09-05-20 1576 Update of electron elastic scatte << 741 Update of electron elastic scattering low limit 1577 742 1578 09.06.2012 M.K tag emdna-V09-05-19 743 09.06.2012 M.K tag emdna-V09-05-19 1579 Fixed shadowing 744 Fixed shadowing 1580 745 1581 04.06.2012 M.K tag emdna-V09-05-18 746 04.06.2012 M.K tag emdna-V09-05-18 1582 Add G4ITTrackingInteractivity + c 747 Add G4ITTrackingInteractivity + correct coverity warnings 1583 748 1584 24.05.2012 M.K tag emdna-V09-05-17 749 24.05.2012 M.K tag emdna-V09-05-17 1585 Remove unnecessary call of pow in 750 Remove unnecessary call of pow in G4DNASecondOrderReaction 1586 751 1587 23.05.2012 M.K tag emdna-V09-05-16 752 23.05.2012 M.K tag emdna-V09-05-16 1588 Add initialisation of G4ITTrackHo 753 Add initialisation of G4ITTrackHolder in copy constructor of 1589 G4ITStepManager 754 G4ITStepManager 1590 Prevent call of destructor of G4I 755 Prevent call of destructor of G4ITStepManager and 1591 G4DNAChemistryManager 756 G4DNAChemistryManager 1592 757 1593 23.05.2012 M.K tag emdna-V09-05-15 758 23.05.2012 M.K tag emdna-V09-05-15 1594 Display warning (only once) from 759 Display warning (only once) from G4DNAMolecularMaterial 1595 when one of its methods is called 760 when one of its methods is called using a material that is 1596 not defined as a molecule 761 not defined as a molecule 1597 762 1598 21.05.2012 M.K tag emdna-V09-05-14 763 21.05.2012 M.K tag emdna-V09-05-14 1599 Modify G4DNAMolecularMaterial 764 Modify G4DNAMolecularMaterial 1600 Modify G4DNADamages 765 Modify G4DNADamages 1601 Add G4DNASecondOrderReaction prot 766 Add G4DNASecondOrderReaction prototype 1602 Modify all models to use G4DNAMol 767 Modify all models to use G4DNAMolecularMaterial 1603 768 1604 14.05.2012 M.K tag emdna-V09-05-13 769 14.05.2012 M.K tag emdna-V09-05-13 1605 Add G4DNAMolecularMaterial 770 Add G4DNAMolecularMaterial 1606 Add G4DNADamages 771 Add G4DNADamages 1607 772 1608 10.05.2012 M.K tag emdna-V09-05-12 773 10.05.2012 M.K tag emdna-V09-05-12 1609 Add the possibility of calling G4 774 Add the possibility of calling G4ITStepManager::EndTracking() 1610 from UserReactionAction::EndProce 775 from UserReactionAction::EndProcessing() 1611 776 1612 08.05.2012 M.K tag emdna-V09-05-11 777 08.05.2012 M.K tag emdna-V09-05-11 1613 Use inverseErf from CLHEP 778 Use inverseErf from CLHEP 1614 779 1615 03.05.2012 M.K tag emdna-V09-05-10 780 03.05.2012 M.K tag emdna-V09-05-10 1616 Add erfc function for windows com 781 Add erfc function for windows compilator (VC++) 1617 782 1618 03.05.2012 M.K tag emdna-V09-05-09 783 03.05.2012 M.K tag emdna-V09-05-09 1619 Add an exception in molecular dec 784 Add an exception in molecular decay, in case no decay channel was proposed in input 1620 785 1621 03.05.2012 M.K tag emdna-V09-05-08 786 03.05.2012 M.K tag emdna-V09-05-08 1622 Add products of dissociative atta 787 Add products of dissociative attachments (as a molecular decay) 1623 Add new methods in G4ChemistryMan 788 Add new methods in G4ChemistryManager : 1624 - PushMolecule 789 - PushMolecule 1625 - PushMoleculeAtParentTimeAndPlac 790 - PushMoleculeAtParentTimeAndPlace 1626 Reset() at the end of G4ITStepMan 791 Reset() at the end of G4ITStepManager::Process() 1627 792 1628 30.03.2012 M.K tag emdna-V09-05-07 793 30.03.2012 M.K tag emdna-V09-05-07 1629 Same as emdna-V09-05-06 794 Same as emdna-V09-05-06 1630 795 1631 30.03.2012 M.K tag emdna-V09-05-06 796 30.03.2012 M.K tag emdna-V09-05-06 1632 1) Add separate navigator for syn 797 1) Add separate navigator for synchronous tracking 1633 New classes : 798 New classes : 1634 * G4ITTransportationManager 799 * G4ITTransportationManager 1635 * G4ITNavigator (just a small cha 800 * G4ITNavigator (just a small change from G4Navigator) 1636 2) A messenger for G4ITStepManage 801 2) A messenger for G4ITStepManager : 1637 * G4ITSteppingMessenger 802 * G4ITSteppingMessenger 1638 3) Solve bugs with normal and bro 803 3) Solve bugs with normal and brownian ITTransportation 1639 804 1640 14.03.2012 M.K tag emdna-V09-05-05 805 14.03.2012 M.K tag emdna-V09-05-05 1641 * int G4VITProcess::fProcessID 806 * int G4VITProcess::fProcessID 1642 int G4VITProcess::fNbProcess 807 int G4VITProcess::fNbProcess 1643 -> become size_t + related change 808 -> become size_t + related changes 1644 * when a poststep process propo 809 * when a poststep process proposes an IL < 0 1645 => considered as a time, and tran 810 => considered as a time, and transportation::computestep 1646 is used 811 is used 1647 812 1648 14.03.2012 M.K tag emdna-V09-05-04 813 14.03.2012 M.K tag emdna-V09-05-04 1649 Fix compilation warning 814 Fix compilation warning 1650 815 1651 14.03.2012 M.K tag emdna-V09-05-03 816 14.03.2012 M.K tag emdna-V09-05-03 1652 Improve the management of information i 817 Improve the management of information in G4ITStepProcessor 1653 Fix coverity warnings 818 Fix coverity warnings 1654 819 1655 18.01.2012 S.I. tag emdna-V09 820 18.01.2012 S.I. tag emdna-V09-05-02 1656 Removal of G4Water* classes in ut 821 Removal of G4Water* classes in utils 1657 822 1658 11.01.2012 M.K tag emdna-V09 823 11.01.2012 M.K tag emdna-V09-05-01 1659 Bug fix in G4DNAChemistryManager: 824 Bug fix in G4DNAChemistryManager::CreateSolvatedElectron 1660 concerning the final position of 825 concerning the final position of the solvated electron 1661 using Sanche thermalization 826 using Sanche thermalization 1662 827 1663 16.12.2011 S.I tag emdna-V09 828 16.12.2011 S.I tag emdna-V09-05-00 1664 Updated source of cross section f 829 Updated source of cross section file for elastic scattering 1665 830 1666 25.11.2011 M.K tag emdna-V09 831 25.11.2011 M.K tag emdna-V09-04-52 1667 Correct a typo in previous tag 832 Correct a typo in previous tag 1668 833 1669 25.11.2011 M.K tag emdna-V09 834 25.11.2011 M.K tag emdna-V09-04-51 1670 Place the reaction products at th 835 Place the reaction products at the reaction site 1671 rather than center of mass in DNA 836 rather than center of mass in DNAMolecularReaction 1672 837 1673 21.11.2011 M.K tag emdna-V09 838 21.11.2011 M.K tag emdna-V09-04-50 1674 Change the name of macros in AddC 839 Change the name of macros in AddClone_def.hh to 1675 avoid conflicts with ROOT. 840 avoid conflicts with ROOT. 1676 Add short class description (comm 841 Add short class description (comments added in the new files) 1677 in JavaDoc style for doxygen use. 842 in JavaDoc style for doxygen use. 1678 843 1679 21.11.2011 M.K tag emdna-V09 844 21.11.2011 M.K tag emdna-V09-04-49 1680 Correct a wrong condition in the 845 Correct a wrong condition in the step manager 1681 Avoid the call of Green brownian 846 Avoid the call of Green brownian bridge when 1682 the time step is equal to zero (b 847 the time step is equal to zero (bug) 1683 Give priority to G4Processes over 848 Give priority to G4Processes over reaction processes 1684 when the time steps returned by t 849 when the time steps returned by the time stepper 1685 and the processes are equal 850 and the processes are equal 1686 Improve verbose 851 Improve verbose 1687 852 1688 21.11.2011 M.K tag emdna-V09 853 21.11.2011 M.K tag emdna-V09-04-48 1689 Fix incoherent management of time 854 Fix incoherent management of time and secondaries in management/ 1690 Avoid memory leak related to the 855 Avoid memory leak related to the management of ITs 1691 Correct verbose in new models & p 856 Correct verbose in new models & process 1692 857 1693 18.11.2011 M.K tag emdna-V09 858 18.11.2011 M.K tag emdna-V09-04-47 1694 Fix uninitialized boolean variabl << 859 Fix uninitialized boolean variable (fWriteFile) 1695 in G4DNAChemistryManager 860 in G4DNAChemistryManager 1696 861 1697 18.11.2011 M.K tag emdna-V09 862 18.11.2011 M.K tag emdna-V09-04-46 1698 Fix compilation error in G4TrackL 863 Fix compilation error in G4TrackList on macOs 1699 Clean G4DNAMolecularDecayDisplace 864 Clean G4DNAMolecularDecayDisplacer from comments 1700 Correct a typo in G4DNAChemistryM 865 Correct a typo in G4DNAChemistryManager (H20 -> H2O) 1701 866 1702 15.11.2011 G.Cosmo tag emdna-V09 867 15.11.2011 G.Cosmo tag emdna-V09-04-45 1703 Fixes to initialisation of static 868 Fixes to initialisation of static data in G4VMolecularDecayDisplacer 1704 and G4DNAMolecularDecayDisplacer, 869 and G4DNAMolecularDecayDisplacer, to allow generation of DLLs on 1705 Windows. 870 Windows. 1706 Fixed compilation warning on icc 871 Fixed compilation warning on icc compiler in 1707 G4MolecularDecayTable.cc 872 G4MolecularDecayTable.cc 1708 873 1709 10.11.2011 M.K. tag emdna-V09 874 10.11.2011 M.K. tag emdna-V09-04-44 1710 Fix a bug in G4DNATransformElectr 875 Fix a bug in G4DNATransformElectronModel 1711 876 1712 10.11.2011 M.K. tag emdna-V09 877 10.11.2011 M.K. tag emdna-V09-04-43 1713 Clean classes for release 878 Clean classes for release 1714 Add comment into source 879 Add comment into source 1715 Change name of some methods 880 Change name of some methods 1716 Transform two independent singlet 881 Transform two independent singleton pointers to auto_ptr 1717 in order to prevent the user from 882 in order to prevent the user from deleting those classes 1718 (ITStepMan + DNAChemMan) 883 (ITStepMan + DNAChemMan) 1719 884 1720 10.11.2011 M.K. tag emdna-V09 885 10.11.2011 M.K. tag emdna-V09-04-42 1721 For safety (at the time of static 886 For safety (at the time of static members destruction) 1722 change fgManager in MolConf into 887 change fgManager in MolConf into a pointer delete by 1723 the chemistryManager. 888 the chemistryManager. 1724 889 1725 09.11.2011 M.K. tag emdna-V09 890 09.11.2011 M.K. tag emdna-V09-04-41 1726 Add friend class G4TrackList_Boun 891 Add friend class G4TrackList_Boundary; 1727 in G4TrackListNode. 892 in G4TrackListNode. 1728 Simplify and improve the use of d 893 Simplify and improve the use of dnaChemMan 1729 Add more convenient methods in us 894 Add more convenient methods in userReactionAction 1730 895 1731 08.11.2011 M.K. tag emdna-V09 896 08.11.2011 M.K. tag emdna-V09-04-40 1732 Fix coverity warnings 897 Fix coverity warnings 1733 898 1734 07.11.2011 M.K. tag emdna-V09 899 07.11.2011 M.K. tag emdna-V09-04-39 1735 Add correct types/sub-types for D 900 Add correct types/sub-types for DNAElectronSolvatation 1736 DNAMolecularDecay, DNABrownianTra 901 DNAMolecularDecay, DNABrownianTransportation, ITTransp 1737 Add the possibility to link a dec 902 Add the possibility to link a decay time to a given 1738 electronic configuration while de 903 electronic configuration while declaring the decay 1739 scheme through : G4MoleculeDef::A 904 scheme through : G4MoleculeDef::AddeConfToExcitedState 1740 Clean classes for release 905 Clean classes for release 1741 906 1742 03.11.2011 M.K. tag emdna-V09 907 03.11.2011 M.K. tag emdna-V09-04-38 1743 Add dna libs in sources.cmake 908 Add dna libs in sources.cmake 1744 909 1745 03.11.2011 M.K. tag emdna-V09 910 03.11.2011 M.K. tag emdna-V09-04-37 1746 Add G4ITStepManager fVerbose 911 Add G4ITStepManager fVerbose 1747 Add dna includes in sources.cmake 912 Add dna includes in sources.cmake 1748 << 913 1749 01.11.2011 M.K. tag emdna-V09 914 01.11.2011 M.K. tag emdna-V09-04-36 1750 Remove warnings on G4ITModelProce 915 Remove warnings on G4ITModelProcessor, 1751 G4ITTransportation, G4TrackList o 916 G4ITTransportation, G4TrackList on Windows 1752 917 1753 01.11.2011 G.Cosmo 918 01.11.2011 G.Cosmo 1754 Renamed export flags for DLL buil 919 Renamed export flags for DLL builds to G4EM_ALLOC_EXPORT and 1755 updated GNUMakefiles to have it p 920 updated GNUMakefiles to have it properly defined. 1756 921 1757 31.10.2011 M.K tag emdna-V09-04-35 922 31.10.2011 M.K tag emdna-V09-04-35 1758 Remove obsolete G4Exception 923 Remove obsolete G4Exception 1759 Remove "friend class G4KDTree" in G4KDN 924 Remove "friend class G4KDTree" in G4KDNode 1760 Remove G4VITProcessor and all relatives << 925 Remove G4VITProcessor and all relatives 1761 Fix windows compilation errors & warnin 926 Fix windows compilation errors & warnings 1762 927 1763 28.10.2011 M.K tag emdna-V09-04-34 928 28.10.2011 M.K tag emdna-V09-04-34 1764 Remove __PRETTY_FUNCTION__ introd 929 Remove __PRETTY_FUNCTION__ introduce __Exception_Origin__ 1765 Plus remove obsolete G4Exception 930 Plus remove obsolete G4Exception 1766 931 1767 28.10.2011 M.K tag emdna-V09-04-33 932 28.10.2011 M.K tag emdna-V09-04-33 1768 Displace G4DNAChemistryManager, G 933 Displace G4DNAChemistryManager, G4DNAMolecularReactionTable, 1769 G4VDNAReactionModel to utils 934 G4VDNAReactionModel to utils 1770 Displace G4DNAMoleculeEncouterSte 935 Displace G4DNAMoleculeEncouterStepper, G4DNAMoleculeReaction 1771 to models 936 to models 1772 937 1773 27.10.2011 M.K tag emdna-V09-04-32 938 27.10.2011 M.K tag emdna-V09-04-32 1774 Fix BornIonisation + the two RuddIoni 939 Fix BornIonisation + the two RuddIoni 1775 coverity errors. 940 coverity errors. 1776 941 1777 26.10.2011 M.K tag emdna-V09-04-31 942 26.10.2011 M.K tag emdna-V09-04-31 1778 change std::shared_ptr to CLHEP::shared << 943 change std::shared_ptr to CLHEP::shared_ptr 1779 944 1780 26.10.2011 M.K. tag emdna-V09-04-30 945 26.10.2011 M.K. tag emdna-V09-04-30 1781 Memory leak fixes 946 Memory leak fixes 1782 G4MolecularConfiguration::fManager adde 947 G4MolecularConfiguration::fManager added 1783 948 1784 26.10.2011 M.K. tag emdna-V09-04-29 949 26.10.2011 M.K. tag emdna-V09-04-29 1785 G4DNAIonisation : add models for C/N/O/ 950 G4DNAIonisation : add models for C/N/O/Fe 1786 Add electron solvatation process & mode 951 Add electron solvatation process & models 1787 Add chemical processes 952 Add chemical processes 1788 953 1789 21.10.2011 M.K. tag emdna-V09-04-28 954 21.10.2011 M.K. tag emdna-V09-04-28 1790 Same as emdna-V09-04-27 including model << 955 Same as emdna-V09-04-27 including models/ & processes/ from 1791 emdna-V09-04-24 956 emdna-V09-04-24 1792 << 957 1793 21.10.2011 M.K. tag emdna-V09-04-27 958 21.10.2011 M.K. tag emdna-V09-04-27 1794 CMake fixes from emdna-V09-04-24 959 CMake fixes from emdna-V09-04-24 1795 << 960 1796 21.10.2011 M.K. tag emdna-V09-04-26 961 21.10.2011 M.K. tag emdna-V09-04-26 1797 Bug fixes and new dev from the previous << 962 Bug fixes and new dev from the previous tag 1798 963 1799 21.10.2011 S. Incerti tag emdna-V09-04-25 964 21.10.2011 S. Incerti tag emdna-V09-04-25 1800 Extension of ionisation by HZE proposed 965 Extension of ionisation by HZE proposed by Z. Francis 1801 966 1802 20.10.2011 M.K. tag emdna-V09-04-24 967 20.10.2011 M.K. tag emdna-V09-04-24 1803 Bug fixes and new dev from the previous 968 Bug fixes and new dev from the previous tag 1804 << 969 1805 07.10.2011 M.K. tag emdna-V09-04-23 970 07.10.2011 M.K. tag emdna-V09-04-23 1806 First tag with "molecules" files << 971 First tag with "molecules" files 1807 << 972 1808 07.10.2011 M.K. tag emdna-V09-04-22 973 07.10.2011 M.K. tag emdna-V09-04-22 1809 Add molecules+management directory 974 Add molecules+management directory 1810 First tag with "management" files 975 First tag with "management" files 1811 976 1812 09.09.2011 G.Folger tag emdna-V09 977 09.09.2011 G.Folger tag emdna-V09-04-21 1813 utils/sources.cmake: remove refer << 978 utils/sources.cmake: remove reference to non-existant 1814 G4DNAMoleculeManager.cc << 979 G4DNAMoleculeManager.cc 1815 980 1816 05.09.2011 A. M. M. K., S. I., tag emdna-V09 981 05.09.2011 A. M. M. K., S. I., tag emdna-V09-04-20 1817 Updated sources.make and CMakeLis 982 Updated sources.make and CMakeLists.txt 1818 983 1819 30.08.2011 A. M. M. K., S. I., tag emdna-V09 984 30.08.2011 A. M. M. K., S. I., tag emdna-V09-04-19 1820 Reorganized whole architecture. 985 Reorganized whole architecture. 1821 986 1822 24.08.2011 A. Mantero, tag emdna-V09-04-18 987 24.08.2011 A. Mantero, tag emdna-V09-04-18 1823 Fixed a bug regarding energy depo 988 Fixed a bug regarding energy deposition (bindingEnergy=0 1824 if no deexcitation) 989 if no deexcitation) 1825 990 1826 22.08.2011 S. Incerti, tag emdna-V09-04-17 991 22.08.2011 S. Incerti, tag emdna-V09-04-17 1827 Changed code (em0006) numbering f 992 Changed code (em0006) numbering for G4Exception 1828 993 1829 19.08.2011 S. Incerti, tag emdna-V09-04-16 994 19.08.2011 S. Incerti, tag emdna-V09-04-16 1830 Switched to new G4Exception synta 995 Switched to new G4Exception syntax 1831 996 1832 04.08.2011 A. Mantero, tag emdna-V09-04-15 997 04.08.2011 A. Mantero, tag emdna-V09-04-15 1833 Added enhanced debug information 998 Added enhanced debug information in ionisation models 1834 999 1835 02.08.2011 S. Incerti, tag emdna-V09-04-14 1000 02.08.2011 S. Incerti, tag emdna-V09-04-14 1836 Removed wrong pointer delete in G4DNARu 1001 Removed wrong pointer delete in G4DNARuddIonisation* 1837 1002 1838 28.07.2011 S. Incerti, tag emdna-V09-04-13 1003 28.07.2011 S. Incerti, tag emdna-V09-04-13 1839 Removed obsolete information. 1004 Removed obsolete information. 1840 1005 1841 28.07.2011 S. Incerti, tag emdna-V09-04-12 1006 28.07.2011 S. Incerti, tag emdna-V09-04-12 1842 Updated deexcitation initialization in 1007 Updated deexcitation initialization in ionization models. 1843 1008 1844 21.07.2011 A. Mantero, tag emdna-V09-04-11 1009 21.07.2011 A. Mantero, tag emdna-V09-04-11 1845 Coverity warnings removal 1010 Coverity warnings removal 1846 1011 1847 11.07.2011 S.Incerti, tag emdna-V09-04-10 1012 11.07.2011 S.Incerti, tag emdna-V09-04-10 1848 - Increased energy limits for 1013 - Increased energy limits for 1849 G4DNAChargeIncrease 1014 G4DNAChargeIncrease 1850 G4DNAChargeDecrease 1015 G4DNAChargeDecrease 1851 G4DNADingfelderChargeIncreaseModel 1016 G4DNADingfelderChargeIncreaseModel 1852 G4DNADingflederChargeDecreaseModel 1017 G4DNADingflederChargeDecreaseModel 1853 in collaboration with Ziad F. 1018 in collaboration with Ziad F. 1854 - This tag includes Alfonso's upgrade << 1019 - This tag includes Alfonso's upgrade 1855 of ionisation classes for Auger e- 1020 of ionisation classes for Auger e- 1856 1021 1857 16.05.2011 A.Mantero, tag emdna-V09-04-09 1022 16.05.2011 A.Mantero, tag emdna-V09-04-09 1858 Further compilation warnings removal 1023 Further compilation warnings removal 1859 1024 1860 16.05.2011 A.Mantero, tag emdna-V09-04-08 1025 16.05.2011 A.Mantero, tag emdna-V09-04-08 1861 Compilation warnings removal 1026 Compilation warnings removal 1862 1027 1863 12.05.2011 A.Mantero, tag emdna-V09-04-07 1028 12.05.2011 A.Mantero, tag emdna-V09-04-07 1864 added Atomic Deexcitation to Ionisation 1029 added Atomic Deexcitation to Ionisation Models 1865 1030 1866 04.05.2011 S. Incerti, tag emdna-V09-04-06 1031 04.05.2011 S. Incerti, tag emdna-V09-04-06 1867 Fixed compilation error on icc in 1032 Fixed compilation error on icc in 1868 G4DNADingfelderChargeIncreaseModel.cc. 1033 G4DNADingfelderChargeIncreaseModel.cc. 1869 1034 1870 03.05.2011 S. Incerti, tag emdna-V09-04-05 1035 03.05.2011 S. Incerti, tag emdna-V09-04-05 1871 Changed process sub-type numberin 1036 Changed process sub-type numbering. 1872 1037 1873 30.04.2011 S. Incerti, tag emdna-V09-04-04 1038 30.04.2011 S. Incerti, tag emdna-V09-04-04 1874 Fixed coverity warnings. 1039 Fixed coverity warnings. 1875 1040 1876 05.04.2011 S. Incerti, tag emdna-V09-04-03 1041 05.04.2011 S. Incerti, tag emdna-V09-04-03 1877 Updated all models for handling o 1042 Updated all models for handling of variable density. 1878 1043 1879 17.03.2011 S. Incerti, tag emdna-V09-04-02 1044 17.03.2011 S. Incerti, tag emdna-V09-04-02 1880 Addition of dependencies to confi 1045 Addition of dependencies to configuration files. 1881 1046 1882 17.03.2011 S. Incerti, tag emdna-V09-04-01 1047 17.03.2011 S. Incerti, tag emdna-V09-04-01 1883 Addition of all files. 1048 Addition of all files. 1884 1049 1885 13.02.2011 S. Incerti, tag emdna-V09-04-00 1050 13.02.2011 S. Incerti, tag emdna-V09-04-00 1886 Creation of dna sub-package in el 1051 Creation of dna sub-package in electromagnetic category.