Geant4 Cross Reference |
1 # Category emdna History << 1 ========================================================= >> 2 Geant4 - an Object-Oriented Toolkit for Simulation in HEP >> 3 ========================================================= >> 4 >> 5 Category History file >> 6 --------------------- >> 7 This file should be used by G4 developers and category coordinators >> 8 to briefly summarize all major modifications introduced in the code >> 9 and keep track of all category-tags. >> 10 It DOES NOT substitute the CVS log-message one should put at every >> 11 committal in the CVS repository ! >> 12 >> 13 ---------------------------------------------------------- >> 14 * Reverse chronological order (last date on top), please * >> 15 ----------------------------------------------------------* 2 16 3 See `CONTRIBUTING.rst` for details of **requir << 17 19-05-2016, MK, tag emdna-V10-01-57 4 which **must** added in reverse chronological << 5 It must **not** be used as a substitute for wr << 6 << 7 ---------------------------------------------- << 8 << 9 ## 2024-10-31 Hoang Tran (emdna-V11-02-17) << 10 - missing value in DNA PTB Ionization Structur << 11 - missing GetMaterial() in DNA PTB Excitation << 12 << 13 ## 2024-10-02 Hoang Tran (emdna-V11-02-16) << 14 - Modified the molecule names of OH, HO2, O in << 15 Each molecule configuration has a molecule d << 16 << 17 ## 2024-08-27 Gabriele Cosmo (emdna-V11-02-15) << 18 - Fixed reported Coverity defects for use of s << 19 and const iterators. << 20 << 21 ## 2024-08-20 Hoang Tran (emdna-V11-02-14) << 22 - debug invalid a root node of KDTree << 23 << 24 ## 2024-08-08 Gabriele Cosmo (emdna-V11-02-13) << 25 - Fixed reported Coverity defects in G4LEPTSEl << 26 for explicit null dereferenced pointer and o << 27 cleanup. << 28 << 29 ## 2024-05-23 Hoang Tran (emdna-V11-02-12) << 30 - Delete enum unused due to te use of EmParame << 31 to control chemistry models in G4EmDNAChemis << 32 << 33 ## 2024-05-11 Gabriele Cosmo (emdna-V11-02-11) << 34 - Fixed compilation error on macOS/clang with << 35 of std::function in G4OctreeFinder. << 36 << 37 ## 2024-05-06 Gabriele Cosmo (emdna-V11-02-10) << 38 - Fixed compilation warning on macOS/XCode for << 39 in G4DNADoubleIonisationModel and G4DNAMulti << 40 << 41 ## 2024-04-25 Hoang Tran (emdna-V11-02-09) << 42 - Delete DelayLists at the end of chemistry st << 43 - clean the G4Scheduler << 44 << 45 ## 2024-04-24 W.G.Shin (emdna-V11-02-08) << 46 - G4DNAELSEPAElasticModel << 47 - Modified to be compatible with density sca << 48 << 49 ## 2024-04-19 Gabriele Cosmo (emdna-V11-02-07) << 50 - Fixed compilation error on Windows VC++ with << 51 Added missing declarations for TG4MoleculeSh << 52 Based on [GitHub PR#69](https://github.com/G << 53 << 54 ## 2024-04-18 Hoang Tran (emdna-V11-02-06) << 55 - debug invalid KDTree node. << 56 << 57 ## 2024-04-15 Vladimir Ivanchenko (emdna-V11-0 << 58 - G4GeneralIonIonisationModel, G4DNAIonChargeI << 59 G4DNAIonChargeDecreaseModel - new classes im << 60 ions heavier than Helium << 61 - G4DNAChargeDecrease, G4DNAChargeIncrease - r << 62 min/max model energy inside processes clas << 63 - G4DNARuddIonisationExtendedModel - updated i << 64 from the general model << 65 - source.cmake in models sub-directory become << 66 both .hh and .cc files << 67 << 68 ## 2024-04-10 Shogo Okada (emdna-V11-02-04) << 69 - G4DNAElectronHoleRecombination << 70 - Changed the branch condition in FindReacta << 71 involved in electron-hole recombination << 72 - G4DNAWaterDissociationDisplacer << 73 - Added dissociative decay channels for mult << 74 - G4DNAMultipleIonisationManager << 75 - New class focusing on generation of multip << 76 calculation of scale parameter to compute << 77 multiple-ionization process << 78 - G4DNADoubleIonisation << 79 - G4DNATripleIonisation << 80 - G4DNAQuadrupleIonisation << 81 - New process classes for multiple-ionizatio << 82 - G4DNADoubleIonisationModel << 83 - G4DNATripleIonisationModel << 84 - G4DNAQuadrupleIonisationModel << 85 - New model classes related to multiple-ioni << 86 << 87 ## 2024-04-05 Vladimir Ivanchenko (emdna-V11-0 << 88 - G4DNARuddIonisationExtendedModel - updated m << 89 uppload data in the class constructor once << 90 effective charge approach for all ions wit << 91 correct computation of stopping power and << 92 variables before sampling, optimized algor << 93 becomes ~10 times faster), removed unused << 94 << 95 ## 2024-02-29 Hoang Tran (emdna-V11-02-02) << 96 - correct verbose conditions for warning in IR << 97 << 98 ## 2024-02-24 Hoang Tran (emdna-V11-02-01) << 99 - Optimize IRT-syn at 1 ps for high LET applic << 100 << 101 ## 2023-12-15 Vladimir Ivanchenko (emdna-V11-0 << 102 - G4DNABornAngle - fixed numerical problem: ad << 103 use relativistic formula for max energy tr << 104 << 105 ## 2023-11-14 Ben Morgan (emdna-V11-01-25) << 106 - Use G4FindDataDir to access data libraries i << 107 << 108 ## 2023-11-11 Hoang Tran (emdna-V11-01-24) << 109 - correct fastercode section for dna opt6 << 110 << 111 ## 2023-10-12 Hoang Tran (emdna-V11-01-23) << 112 - correct scavenger counter for oxygen << 113 << 114 ## 2023-10-11 Hoang Tran (emdna-V11-01-22) << 115 - Fixed the K shell bug in G4DNARuddIonisation << 116 << 117 ## 2023-10-10 Hoang Tran (emdna-V11-01-21) << 118 - improved equilibrium processes, introduced G << 119 << 120 ## 2023-09-04 Gabriele Cosmo (emdna-V11-01-20) << 121 - In navigation classes, removed references to << 122 which is now deprecated. << 123 << 124 ## 2023-08-31 Gabriele Cosmo (emdna-V11-01-19) << 125 - Removed references to unused G4GRSSolid and << 126 << 127 ## 2023-08-29 (emdna-V11-01-18) << 128 - Fix minor/obvious Coverity issues << 129 << 130 ## 2023-07-21 Ben Morgan (emdna-V11-01-17) << 131 - Apply core clang-tidy fixes plus those for << 132 - Cons/destructor modernization << 133 - Readability and logic for conditionals/boo << 134 << 135 ## 2023-07-12 Ben Morgan (emdna-V11-01-16) << 136 - Apply patch from [GitHub PR 58](https://gith << 137 - Use std::erfc to avoid precision loss << 138 - Remove unused header << 139 << 140 ## 2023-06-10 Hoang Tran (emdna-V11-01-15) << 141 - minor correction for DNA material in option6 << 142 << 143 ## 2023-06-09 Hoang Tran (emdna-V11-01-14) << 144 - use analytical method for DNA material in op << 145 << 146 ## 2023-06-03 Vladimir Ivanchenko (emdna-V11-0 << 147 - G4DNARuddIonisationExtendedModel - model re- << 148 threads, applicable for scaled energy interv << 149 an ion data is not available proton x-sectio << 150 used, sampling of delta-electron is done usi << 151 << 152 ## 2023-05-25 Hoang Tran (emdna-V11-01-12) << 153 - Modified DNA cross section file name to new << 154 << 155 ## 2023-05-19 Hoang Tran (emdna-V11-01-11) << 156 - Add DNA cross section to dna_option6 << 157 << 158 ## 2023-05-17 Hoang Tran (emdna-V11-01-10) << 159 - Fix Compilation warnings on XCode << 160 << 161 ## 2023-05-04 Hoang Tran (emdna-V11-01-09) << 162 - correct the initial values of G4DNAEventSche << 163 << 164 ## 2023-04-28 Hoang Tran (emdna-V11-01-08) << 165 - add time structure (pulsed beam) to water ra << 166 << 167 ## 2023-04-26 Hoang Tran (emdna-V11-01-07) << 168 - correct KDTree bug << 169 << 170 ## 2023-03-24 Hoang Tran (emdna-V11-01-06) << 171 - icsd physicslist: deleted unused model, << 172 - Apdated RegisterModel function with new stru << 173 - added model data to G4DNAMaterialManager sin << 174 << 175 ## 2023-03-08 Gabriele Cosmo (emdna-V11-01-05) << 176 - Fixed compilation warning on macOS/XCode for << 177 in G4DNAVacuumModel::Initialise(). << 178 << 179 ## 2023-02-09 Hoang Tran (emdna-V11-01-04) << 180 - Introduced G4DNAMaterialManager to manage av << 181 and keeps DNA cross section data in one thread << 182 - minor change in G4VDNAModel << 183 << 184 ## 2023-01-27 Hoang Tran (emdna-V11-01-03) << 185 - reorganize multiple material model of PTB mo << 186 G4VDNAModel plays like a data layer for multip << 187 The concrete models are independent of G4DNAMo << 188 << 189 ## 2023-01-17 Hoang Tran (emdna-V11-01-02) << 190 - replaced string to material index and clean << 191 G4DNAPTBIonisationModel, G4DNAPTBElasticModel, << 192 G4DNAPTBExcitationStructure) - PTB models << 193 - added material pointer members for each conc << 194 - removed unused objects (G4DataVector()) << 195 << 196 ## 2023-01-06 Hoang Tran (emdna-V11-01-01) << 197 - clean G4DNAModelInterface file for the model << 198 << 199 ## 2022-12-12 Hoang Tran (emdna-V11-01-00) << 200 - fix coverity of G4DNARuddIonisationExtendedM << 201 (Uninitialized scalar variable) from cand1 ana << 202 << 203 ## 2022-11-24 Vladimir Ivanchenko (emdna-V11-0 << 204 - G4DNARuddIonisationExtendedModel - fixed com << 205 radioactive decay module - before this upd << 206 only 5 ions have data needed for this mode << 207 model scaling relation to the carbon ion i << 208 no data; low-energy limit is used now more << 209 but not killed, because they may have radi << 210 lines are removed from the class << 211 << 212 ## 2022-11-23 Gabriele Cosmo (emdna-V11-00-38) << 213 - Fixed more compilation warnings for implicit << 214 << 215 ## 2022-11-22 Hoang Tran (emdna-V11-00-37) << 216 - delete unused tests in dna (G4DNAProcessTest << 217 << 218 ## 2022-11-18 Gabriele Cosmo (emdna-V11-00-36) << 219 - Fixed compilation warnings for implicit type << 220 << 221 ## 2022-11-08 Vladimir Ivanchenko (emdna-V11-0 << 222 - G4DNAUeharaScreenedRutherfordElasticModel - << 223 low and high energy limit for the model; r << 224 << 225 ## 2022-11-01 Hoang Tran (emdna-V11-00-34) << 226 - Fix Coverity issues for ref-09 << 227 << 228 ## 2022-10-10 Hoang Tran (emdna-V11-00-33) << 229 - minor correction of IRT-syn model (chemistry << 230 after 1 ps. << 231 << 232 ## 2022-10-21 Yann Perrot, Le Tuan Anh (emdna- << 233 - Add nitrogen models from PTra code << 234 << 235 ## 2022-10-10 Hoang Tran (emdna-V11-00-31) << 236 - Fixed minor mistake of file name in G4DNARPW << 237 - Added protection for HighEnergyLimit/LowEner << 238 G4DNARPWBAExcitationModel << 239 << 240 ## 2022-10-07 Gabriele Cosmo (emdna-V11-00-30) << 241 - Fixed compilation warnings on Intel/icx comp << 242 but not used in G4ITNavigator2. << 243 << 244 ## 2022-10-05 Hoang Tran (emdna-V11-00-29) << 245 - Fix user's report for IRT model. << 246 If the first IRTSampling won't give any rea << 247 << 248 ## 2022-10-03 Hoang Tran (emdna-V11-00-28) << 249 - Fix Coverity static analysis for ref-08 << 250 uninit_member in G4DNAMillerGreenExcitationMo << 251 G4DNADingfelderChargeIncreaseModel,G4DNARuddI << 252 Use auto & instead of auto : G4ITFinder, G4DN << 253 << 254 ## 2022-09-08 Hoang Tran (emdna-V11-00-27) << 255 - Resolve dependency inconsistencies : << 256 dna/management/include/G4ChemicalMoleculeF << 257 dna/management/include/G4UserMeshAction.hh << 258 dna/management/include/G4OctreeFinder.hh i << 259 << 260 ## 2022-09-05 Ben Morgan (emdna-V11-00-26) << 261 - Partially resolve dependency inconsistencies << 262 - NB: cannot be resolved fully without intro << 263 G4emdna-man, G4emdna-molman, G4emdna-utils << 264 << 265 ## 2022-09-01 Seth R Johnson (emdna-V11-00-25) << 266 - Define G4CT_MAX_COUNT for changing "compile << 267 errors on NVHPC compiler. << 268 << 269 ## 2022-08-30 Vladimir Ivanchenko (emdna-V11-0 << 270 - G4DNAExcitation, G4DNAVibExcitation, G4DNARo << 271 cleanup according to the recent G4VEmProce << 272 headers are moved to source; C++11 keyward << 273 << 274 ## 2022-06-21 Igor Semeniouk (emdna-V11-00-23) << 275 - G4DNABornIonisationModel1.cc, G4DNACPA100Ela << 276 G4DNACPA100IonisationModel.cc, G4DNAChampion << 277 G4DNAELSEPAElasticModel.cc, G4DNAEmfietzoglo << 278 G4DNAIonElasticModel.cc, G4DNAQuinnPlasmonEx << 279 G4DNARPWBAIonisationModel.cc, G4DNARelativis << 280 G4DNASancheExcitationModel.cc : << 281 use G4FindDataDir("G4LEDATA") to find datase << 282 << 283 ## 2022-06-03 Hoang Tran (emdna-V11-00-22) << 284 - correct DNA ion definitions in G4DNARuddIoni << 285 << 286 ## 2022-06-01 Hoang Tran (emdna-V11-00-21) << 287 - G4Octree : fixed Coverity warning. << 288 << 289 ## 2022-05-24 Hoang Tran (emdna-V11-00-20) << 290 - update data structure to improve performance << 291 << 292 ## 2022-05-18 Gabriele Cosmo (emdna-V11-00-19) << 293 - G4ITTransportation: fixed misuse of bitwise << 294 << 295 ## 2022-05-12 Sergio Losilla (emdna-V11-00-18) << 296 - Added missing headers. << 297 << 298 ## 2022-05-11 Hoang Tran (emdna-V11-00-17) << 299 - change the scavenging filter of the IRT beyo << 300 << 301 ## 2022-05-02 Hoang Tran (emdna-V11-00-16) << 302 - Add localthread for fUse of G4VMoleculeCount << 303 << 304 ## 2022-04-27 Miguel A. Cortes-Giraldo and Hoa << 305 - Incorporation of model based on RPWBA to tra << 306 - Added G4DNARPWBAExcitationModel, G4DNARPWBAI << 307 << 308 ## 2022-04-25 Hoang Tran (emdna-V11-00-14) << 309 - add UserBrownianAction in G4DNABrownianTrans << 310 G4DNAMolecularDissociation << 311 - replace G4int by int64_t for width integer t << 312 - add fResetScavenger in G4SchedulerMessenger << 313 << 314 ## 2022-04-14 Paolo Dondero (emdna-V11-00-13) << 315 - save local instances for recurrent access to << 316 G4DNAMillerGreenExcitationModel, G4DNARuddIo << 317 G4DNARuddIonisationModel << 318 - use G4Pow and G4Log instead of std::pow and << 319 - inside G4DNARuddIonisationExtendedModel comm << 320 inside G4DNAGenericIonsManager << 321 << 322 ## 2022-04-14 Hoang Tran (emdna-V11-00-12) << 323 - Debug the report #2235 which might be relate << 324 - Clean code << 325 - Delete G4ITFinder.cc << 326 << 327 ## 2022-04-04 Paolo Dondero (emdna-V11-00-11) << 328 - save local instances for recurrent access to << 329 G4DNADingfelderChargeDecreaseModel and G4DNADi << 330 - use G4Pow and G4Log instead of std::pow and << 331 << 332 ## 2022-03-18 SI (emdna-V11-00-10) << 333 - add protection in G4DNACPA100IonisationModel << 334 << 335 ## 2022-03-15 Hoang Tran (emdna-V11-00-09) << 336 - remove macro commands to control the chemist << 337 (creating models in G4SchedulerMessenger can m << 338 - add flag OctreeFinder in IRT_syn's Initializ << 339 << 340 ## 2022-03-04 Hoang Tran (emdna-V11-00-08) << 341 - add macro commands to control the chemistry << 342 parameters including the chemical molecules an << 343 << 344 ## 2022-02-18 Hoang Tran (emdna-V11-00-07) << 345 - optimize IRT-syn model, use reaction radius << 346 - delete G4VReactionType, G4DNAReactionTypeMan << 347 G4DNAPartiallyDiffusionControlled << 348 - delete G4DNAIRT_geomtries << 349 << 350 ## 2022-02-17 Jonas Hahnfeld (emdna-V11-00-06) << 351 - `G4ITTransportation`: Make `PrepareState` mo << 352 - `G4DNAPolyNucleotideReactionProcess`: << 353 - Move `PrepareState` and `State` macros int << 354 - Make `PrepareState` more function-like, ex << 355 - Move variable `pMoleculeA` under `G4VERBOS << 356 << 357 ## 2022-02-10 Hoang Tran (emdna-V11-00-05) << 358 - add the condition of water material for the << 359 warning in G4DNAMolecularDissociation::DecayIt << 360 << 361 ## 2022-02-3 Hoang Tran (emdna-V11-00-04) << 362 - modify the macro in G4Molecule.cc and G4ITTy << 363 << 364 ## 2022-01-18 Jonas Hahnfeld (emdna-V11-00-03) << 365 - Prefer pointer to `const G4Material` if poss << 366 << 367 ## 2022-01-17 Jonas Hahnfeld (emdna-V11-00-02) << 368 - Remove useless `const_cast` of `G4VSensitive << 369 << 370 ## 2021-12-23 Hoang Tran (emdna-V11-00-01) << 371 - add G4DNAPolyNucleotideReactionProcess, G4VD << 372 files for DNA damage applications << 373 << 374 ## 2021-12-10 Ben Morgan (emdna-V11-00-00) << 375 - Change to new Markdown History format << 376 << 377 --- << 378 << 379 # History entries prior to 11.0 << 380 << 381 8-11-2021, H. Tran, emdna-V10-07-15 << 382 - corrected Circular dependencies for mesoscop << 383 - corrected the problem in IRT << 384 << 385 4-11-2021, H. Tran, emdna-V10-07-14 << 386 - define a G4FakeParticleID::fLastValue in the << 387 delete G4FakeParticleID.cc, << 388 solve arithmetic problems, << 389 Added new mesoscopic model for dna chemistry << 390 << 391 21-10-2021, W.G.Shin, emdna-V10-07-13 << 392 - Added a virtual classes for DNA geometry - G << 393 Modified classes - G4DNAIRT, G4DNAIRTMolecul << 394 G4ITModelProcessor, G4Sch << 395 G4DNAMolecularReactionTab << 396 << 397 23-09-2021, A. Ribon, emdna-V10-07-12 << 398 - G4ITTransportation, G4DNAElastic, G4DNAExcit << 399 G4DNAVibExcitation, G4DNAAttachment, G4DNACh << 400 G4DNAChargeIncrease, G4DNAElectronSolvation, << 401 G4DNASecondOrderReaction, G4DNAElectronHoleR << 402 G4DNABrownianTransportation : replaced hardw << 403 with enum values introduced in the new class << 404 << 405 18-07-2021, V. Ivanchenko, emdna-V10-07-11 << 406 - G4DNABohrExcitationModel2, G4DNABohrIonisati << 407 G4VLEPSModel - updated interfaces to G4Physi << 408 << 409 16-07-2021, D. Sakata, emdna-V10-07-10 << 410 - Fixed initialization error in G4DNAELSEPAEla << 411 << 412 28-06-2021, G. Cosmo, emdna-V10-07-09 << 413 - Fixed compilation error in G4ITMultiNavigato << 414 enabled. << 415 << 416 31-05-2021, D.Sakata S. Guatelli, emdna-V10-07 << 417 - Added new classes G4DNADiracRMatrixExcitatio << 418 G4DNAQuinnPlasmonExcitatio << 419 G4DNARelativisticIonisatio << 420 G4DNAPlasmonExcitation << 421 - Modified G4DNAELSEPAElasticModel for gold << 422 << 423 9-05-2021, H.Tran, tag emdna-V10-07-07 << 424 - Add IRT-syn model << 425 << 426 16-04-2021, B.Morgan, tag emdna-V10-07-06 << 427 - Migrate build to modular CMake API << 428 << 429 27-04-2021, H.Tran, tag emdna-V10-07-05 << 430 - G4DNAElectronHoleRecombination: added Octree << 431 - G4DNABrownianTransportation: modified AlongS << 432 - added OctreeFinder and IRTUtils << 433 << 434 26-04-2021, V.Ivanchenko, tag emdna-V10-07-04 << 435 - G4DNABornAngle, G4DNARuddAngle - updated pri << 436 << 437 12-03-2021, L.Pandola, tag emdna-V10-07-03 << 438 - Move DNA-related Unit Tests from lowenergy/t << 439 << 440 24-02-2021, G.Cosmo, tag emdna-V10-07-02 << 441 - Fixed dependency on g4tools, now moved to ex << 442 << 443 16-02-2021, W.G.Shin, tag emdna-V10-07-01 << 444 - G4DNAElectronHoleRecombination << 445 Dissociation channel of electron-hole recomb << 446 G4EmDNAChemistry, _option1, _option2, _optio << 447 - G4DNAWaterDissociationDisplacer << 448 Added the fragment displacement for new diss << 449 << 450 29-10-2020, G.Cosmo, tag emdna-V10-06-12 << 451 - Fix thread contention on mutable data in G4D << 452 help resolving observed crashes in MT runs. << 453 Some code cleanup. << 454 << 455 27-10-2020, V.Ivanchenko, tag emdna-V10-06-11 << 456 - G4DNAMolecularMaterial - removed commented l << 457 - History file fixed << 458 << 459 25-10-2020, V.Ivanchenko, tag emdna-V10-06-10 << 460 - G4DNAMolecularMaterial - attempt to fix nigh << 461 in chem6 example - do not delete instance of << 462 << 463 24-10-2020, I. Hrivnacova, tag emdna-V10-06-09 << 464 - Added dependency on analysis/g4tools in GNUm << 465 required after analysis update (analysis-V10 << 466 << 467 12-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 << 468 - Fixed coverity warning << 469 << 470 10-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 << 471 - Fixed coverity warnings << 472 - Fix of IRT bug << 473 (protection for the crash induced by empty re << 474 << 475 28-05-2020, B.Morgan, tag emdna-V10-06-06 << 476 - Add missing G4analysismng module dependency << 477 << 478 20-05-20: W.G.Shin emdna-V10-06-05 << 479 - Revised displacement of OH radicals of B1A1 << 480 based on momentum conservation in G4DNAWaterDi << 481 - Added missing History << 482 << 483 26-04-20: W.G.Shin emdna-V10-06-04 << 484 - Fixed coverity test << 485 << 486 15-04-20: G.Cosmo emdna-V10-06-03 << 487 - G4MoleculeDefinition: copy constructor and a << 488 are not allowed (as for G4ParticleDefinition << 489 << 490 19-02-20: W.G.Shin emdna-V10-06-02 << 491 - Fixed memory issue on G4DNAMolecularReaction << 492 - Revised headeres of IRT classes << 493 << 494 12-02-20: W.G.Shin emdna-V10-06-01 << 495 - Added protections floating point exception i << 496 << 497 10-01-20: W.G.Shin emdna-V10-06-00 << 498 - Added classes for IRT << 499 - Added features in management classes for IRT << 500 G4ITModelProcessor ...) << 501 - Added features in G4DNAMolecularReactionTabl << 502 - Added molecules of Plante et al. (2017) (Oxy << 503 << 504 15-11-19: G.Cosmo emdna-V10-05-11 << 505 - Fixed cases of implicit type conversions fro << 506 << 507 8-11-19: HT, tag emdna-V10-05-10 << 508 - Fixed the exception divide by zero of diffus << 509 G4DNABrownianTransportation::AlongStepGetPhysi << 510 for the case of static molecules (DNA) (diffus << 511 << 512 24-10-19: J.Apostolakis, tag emdna-V10-05-09 << 513 - Enabled G4ItNavigator{1,2} to flag if it enc << 514 of external physical volume (meant for adapt << 515 << 516 19-10-19: WGS, SI, tag emdna-V10-05-08 << 517 - Added new model G4DNAELSEPAElasticModel << 518 << 519 11-10-19: WGS, SI, tag emdna-V10-05-07 << 520 - G4DNAOneStepThermalizationModel.* : << 521 added Kreipl and Meesungnoen amorphous ice mod << 522 - G4DNAWaterDissociationDisplacer* : updated << 523 << 524 03-06-2019, MK, tag emdna-V10-05-06 << 525 - Fix GCC9 warnings << 526 << 527 26-03-2019, HT, tag emdna-V10-05-05 << 528 - Added G4DNAMolecule << 529 << 530 10-03-2019, MK, tag emdna-V10-05-04 << 531 - Fix reaction site issue << 532 - Chemistry: clarify pointer ownership, clean << 533 << 534 11-03-2019, G.Cosmo, tag emdna-V10-05-03 << 535 - Fixed typos in printouts in G4MolecularConfi << 536 G4VITRestProcess, G4DNAElectronHoleRecombina << 537 << 538 18-01-2019, HT, tag emdna-V10-05-02 << 539 - Transformed the exception into warning in G4 << 540 << 541 28-12-2018, MK, tag emdna-V10-05-01 << 542 DEV-300 : G4DNAChemistryManager clarify pointe << 543 << 544 05-01-2019, HT, tag emdna-V10-05-00 << 545 - moved the checking position of track status << 546 in G4ITStepProcessor::SetInitialStep() << 547 << 548 01-09-2018, SI, tag emdna-V10-04-10 << 549 renamed tag << 550 << 551 01-09-2018, SI, tag emdna-v10-04-09 << 552 - bugzilla 2084 << 553 https://bugzilla-geant4.kek.jp/show_bug.cgi?id << 554 << 555 30-07-2018, SI, tag emdna-V10-04-08 << 556 - included upper energy limit of models (2) << 557 << 558 29-07-2018, SI, tag emdna-V10-04-07 << 559 - included upper energy limit of models << 560 << 561 01-07-2018, SI, tag emdna-V10-04-06 << 562 - added protection in Auger emission << 563 << 564 30-06-2018, MS, ZF, SI tag emdna-V10-04-05 << 565 - updated Si mass in G4DNAGenericIonsManager << 566 << 567 22-06-2018, SI tag emdna-V10-04-04 << 568 - fixed warnings in lepts models << 569 << 570 14-05-2018, SI tag emdna-V10-04-03 << 571 - chemistry update by Mathieu << 572 << 573 01-05-2018, SI tag emdna-V10-04-02 << 574 - chemistry update by Mathieu << 575 << 576 09-02-2018, M.Asai tag emdna-V10-04-01 << 577 - G4DNAMolecularMaterial.cc : << 578 GetDensityTableFor() and GetNumMolPerVolTabl << 579 at G4State_Init rather than G4State_Idle. << 580 - Co-works with run-V10-04-01 and global-V10-0 << 581 << 582 21-12-2017, G.Cosmo tag emdna-V10-04-00 << 583 - Fixed self-consistency in headers (missing # << 584 G4KDNode, G4MoleculeIterator and G4LEPTSDiff << 585 Fixed spurious definition of G4IT namespace << 586 Thanks to Raphael Isemann for reporting thes << 587 << 588 01-11-2017, MK tag emdna-V10-03-30 << 589 - remove models/test directory << 590 << 591 31-10-2017, JA ( tag missing ) << 592 - G4KDNode.hh: Add missing included file - nee << 593 << 594 16-08-2017, SI tag emdna-V10-03-28 << 595 - updated variable types in models << 596 << 597 10-08-2017, SI tag emdna-V10-03-27 << 598 - test << 599 << 600 10-08-2017, SI tag emdna-V10-03-26 << 601 - same as previous << 602 << 603 09-08-2017, SI tag emdna-V10-03-25 << 604 - same as previous << 605 << 606 09-08-2017, SI tag emdna-V10-03-24 << 607 - G4DNAEmfietzoglouIonisationModel: added prot << 608 << 609 03-08-2017, VI tag emdna-V10-03-23 << 610 - G4DNAExcitation, G4DNAIonisation - make cohe << 611 << 612 28-07-2017, SI, tag emdna-V10-03-22 << 613 - added stationary mode flag to CPA100 ionisat << 614 << 615 04-07-2017, SI, tag emdna-V10-03-21 << 616 - added tagging of atom. deexc. products in io << 617 << 618 31-05-2017, SM, tag emdna-V10-03-20 << 619 - Correct windows issues with path of diff. CS << 620 << 621 31-05-2017, SI, tag emdna-V10-03-19 << 622 - roll-back (Windows issues with previous tag) << 623 << 624 24-05-2017, SI, tag emdna-V10-03-18 << 625 - added tagging of atom. deexc. products in io << 626 << 627 11-05-2017, VI tag emdna-V10-03-17 << 628 - fix for gcc 7.1 warnings in G4DNACrossSectio << 629 << 630 10-05-2017, NL, MK, SI, tag emdna-V10-03-16 << 631 - fix for gcc 7.1 warnings in G4DNACrossSectio << 632 << 633 03-05-2017, SM, tag emdna-V10-03-15 << 634 - add the new G4DNADummyModel and allow the co << 635 << 636 27-04-2017, SM, tag emdna-V10-03-14 << 637 - correct small typo mistakes. << 638 << 639 27-04-2017, SM, tag emdna-V10-03-13 << 640 - update Models/G4DNAModelInterface to correct << 641 << 642 10-03-2017, MK, tag emdna-V10-03-12 << 643 - update utils/GNUmakefile << 644 << 645 13-02-2017, MK, tag emdna-V10-03-11 << 646 - G4DNAMolecularMaterial: update doxygen doc << 647 << 648 13-02-2017, MK, tag emdna-V10-03-10 << 649 - G4DNAMolecularMaterial: << 650 remove newly introduced methods, add fatal e << 651 add doxygen documentation << 652 << 653 10-02-2017, MK, tag emdna-V10-03-09 << 654 - Introducing G4PhysChemIO << 655 - Move call to G4TrackList::Pop(track) from G4 << 656 to G4ITTrackHolder. And make sure track stat << 657 when G4ITTrackHolder::PushToKill is called. << 658 << 659 09-02-2017, MK, tag emdna-V10-03-08 << 660 - G4KDNode.hh: remove unused G4ThreeVector hea << 661 - G4KDMap.hh: int->size_t + indentation << 662 - G4KDMap.cc: int->size_t << 663 - G4IT & G4Molecule: template specialization << 664 template<> G4KDNode<G4IT / G4Molecule>::~G4K << 665 << 666 24-01-2017, SM, tag emdna-V10-03-07 << 667 - add a ifdef to remove a warning (windows onl << 668 << 669 23-01-2017, SM, tag emdna-V10-03-06 << 670 - add missing G4DNAModelInterface files (.hh a << 671 << 672 23-01-2017, SM CV, tag emdna-V10-03-05 << 673 - add new G4DNAPTB* classes and the structure << 674 << 675 14-01-2017, MK, tag emdna-V10-02-37 << 676 - Prevent a crash when calling G4ITTrackingMan << 677 the UserTimeStepAction::PostTimeStepAction << 678 - Add missing: G4ITTrackingManager* G4Schedule << 679 << 680 28-12-2016, SI, tag emdna-V10-03-04 << 681 - extended upper energy limit of protons for << 682 G4DNARuddIonisationExtendedModel << 683 << 684 27-12-2016, SI, tag emdna-V10-03-03 << 685 - updated references of CPA100 classes << 686 << 687 23-12-2016, SI, tag emdna-V10-03-02 << 688 - updated sources.cmake << 689 << 690 23-12-2016, SI, tag emdna-V10-03-01 << 691 - commit of first CPA100 classes, part 2 << 692 << 693 21-12-2016, SI, tag emdna-V10-03-00 << 694 - commit of first CPA100 classes << 695 << 696 27-11-2016, MK, tag emdna-V10-02-36 << 697 - G4Electron_aq: correct charge << 698 - G4DNADamages -> G4DNADamage << 699 << 700 17-11-2016, MK, tag emdna-V10-02-35 << 701 - G4ManyFastLists.hh: iterator::GetTrackList() << 702 << 703 16-11-2016, MK, tag emdna-V10-02-34 << 704 - G4VMolecularDissociationDisplacer & G4DNAWat << 705 displacement types can be thread shared << 706 - G4TrackState: Move implementation of static << 707 G4VTrackStateID::Create() to c << 708 << 709 15-11-2016, MK, tag emdna-V10-02-33 << 710 - G4VMolecularDissociationDisplacer.cc: add mi << 711 << 712 14-11-2016, MK, tag emdna-V10-02-32 << 713 - Separate def and impl of dissociation flag t << 714 windows platforms << 715 << 716 14-11-2016, MK, tag emdna-V10-02-31 << 717 - G4DNAOneStepThermalizationModel.cc: << 718 tag init constexpr factor with number rather << 719 << 720 14-11-2016, MK, tag emdna-V10-02-30 << 721 - Use CLHEP::pi instead of M_PI << 722 << 723 14-11-2016, MK, tag emdna-V10-02-29 << 724 - Correct bracket enclosing << 725 << 726 14-11-2016, MK, tag emdna-V10-02-28 << 727 - G4VMoleculeCounter: move imp of static metho << 728 - Update displacers, oneStepTherm << 729 - WaterDisplacer: change the electron thermali << 730 - OneStepTherm: two inner thermalization model << 731 - Adds and use G4CTCounter << 732 << 733 02-11-2016, MK, tag emdna-V10-02-27 << 734 - add G4VMoleculeCounter & enable using custom << 735 - pass location information to molecule counte << 736 - G4ITNavigator2: relocate voxelNavigator befo << 737 computeStep & computeSafety << 738 << 739 07-08-2016, SI, tag emdna-V10-02-26 << 740 - added stationnary mode to sub-excitation ele << 741 << 742 23-06-2016, MK << 743 - G4Scheduler: move G4IosFlagsSaver to Process << 744 << 745 3-06-2016, MK, tag emdna-V10-02-25 << 746 - G4DNAScreenedRutherfordElasticModel: modify << 747 at init time << 748 - G4DNAUeharaScreenedRutherfordElasticModel: m << 749 << 750 3-06-2016, MK, tag emdna-V10-02-24 << 751 - G4DNAScreenedRutherfordElasticModel.hh: remo << 752 SetKillBelowThreshold deprecated << 753 - G4DNAScreenedRutherfordElasticModel.cc: remo << 754 prevent erasing/rewriting data (use isInit) << 755 - G4DNAChampionElasticModel.hh: rearrange decl << 756 - G4DNAChampionElasticModel.cc: move up if (i << 757 - G4DNAUeharaScreenedRutherfordElasticModel.cc << 758 model used for another part than e- << 759 << 760 1-06-2016, MK, tag emdna-V10-02-23 << 761 - G4DNAChemistryManager::CreateWaterMolecule: << 762 logic for interface with physics models << 763 << 764 31-05-2016, MK, tag emdna-V10-02-22 << 765 - G4DNAChampionElasticModel.cc: reset check ek << 766 << 767 28-05-2016, MK, tag emdna-V10-02-21 << 768 - G4DNAChampionElasticModel.cc: add missing "s << 769 one of the previous tags << 770 << 771 19-05-2016, MK, tag emdna-V10-02-20 << 772 - G4ITNavigator: remove warnings on gcc6.1 18 - G4ITNavigator: remove warnings on gcc6.1 773 19 774 17-05-2016, MK, tag emdna-V10-02-19 << 20 30-04-2016, MK 775 - G4DNAElectronSolvation, G4DNAOneStepThermali << 776 correct model and process names for solvation << 777 << 778 12-05-2016, MK, tag emdna-V10-02-18 << 779 - G4DNAChampionElasticModel.hh: << 780 * GetKillBelowThreshold is deprecated << 781 * Removed attributes: killBelowEnergy, lowEne << 782 tableFile, tableData << 783 * Method Theta(): remove G4ParticleDefinition << 784 - G4DNAUeharaScreenedRutherfordElasticModel.hh << 785 * SetKillBelowThreshold, GetKillBelowThreshol << 786 (use G4LowECapture or G4DNAElectronSolvatatio << 787 * SelectHighEnergyLimit uses SetHighEnergyLim << 788 emitted when used << 789 * Removed attributes: killBelowEnergy, lowEne << 790 - G4DNAChampionElasticModel.cc & G4DNAUeharaSc << 791 * Verbose check only if preprocessor flag is << 792 * Energy boundaries checked in Initialise() - << 793 * Call to G4Electron removed in Initialise() << 794 * Cleanup CrossSectionPerVolume by removing u << 795 * SampleSecondaries(): remove "kill below thr << 796 * G4DNAChampionElasticModel::Theta remove che << 797 - G4DNAOneStepThermalizationModel.cc: << 798 * Check verbose flag if a preprocessor flag i << 799 * Remove call to G4Electron at initialization << 800 - G4DNATransformElectronModel.cc: << 801 * Check verbose flag if a preprocessor flag i << 802 * Remove call to G4Electron at initialization << 803 * Add check if(G4DNAChemistryManager::IsActiv << 804 created; otherwise, the primary electron is << 805 << 806 30-04-2016, MK, tag emdna-V10-02-17 << 807 - G4VUserChemistryList: Add flag fIsPhysicsCon 21 - G4VUserChemistryList: Add flag fIsPhysicsConstructor 808 22 809 30-04-2016, MK, tag emdna-V10-02-16 << 23 30-04-2016, MK 810 - G4VUserChemistryList: remove a if statement 24 - G4VUserChemistryList: remove a if statement 811 - G4MoleculeCounter: at initialization time, p << 812 unregistered molecule definition << 813 << 814 22-04-2016, MK, tag emdna-V10-02-15 << 815 - G4DNAElectronSolvatation -> G4DNAElectronSol << 816 - G4DNASancheExcitationModel: remove warning w << 817 << 818 22-04-2016, MK, tag emdna-V10-02-14 << 819 - G4DNAMeltonAttachmentModel, G4DNASancheExcit << 820 remove usage of internal energy boundaries << 821 << 822 19-03-2016, SI, tag emdna-V10-02-13 << 823 - added nrj extensibility to SR and USR models << 824 << 825 11-03-2016, SI, tag emdna-V10-02-12 << 826 -roll back to files in emdna-V10-02-06 << 827 << 828 10-03-2016, SI, tag emdna-V10-02-11 << 829 -further cleaning of G4DNAUeharaScreenedRuther << 830 and G4DNAScreenedRutherfordElasticModel << 831 << 832 10-03-2016, SI, tag emdna-V10-02-10 << 833 -further cleaning of G4DNAUeharaScreenedRuther << 834 << 835 07-03-2016, SI, tag emdna-V10-02-09 << 836 -added possibility to extend applicability lim << 837 of G4DNAUeharaScreenedRutherfordElasticModel << 838 << 839 06-03-2016, SI, tag emdna-V10-02-08 << 840 -removed useless G4Pow declaration << 841 << 842 04-03-2016, SI, tag emdna-V10-02-07 << 843 -replaced std::log by G4Log << 844 -replaced std::log10() by G4Log()/g4pow->logZ( << 845 << 846 02-03-2016, SI, tag emdna-V10-02-06 << 847 -replaced std::exp by G4Exp << 848 << 849 02-03-2016, SI, tag emdna-V10-02-05 << 850 -replaced std::exp by G4Exp << 851 << 852 02-03-2016, SI, tag emdna-V10-02-04 << 853 -replaced std::exp by G4Exp << 854 25 855 01-03-2016, SI, tag emdna-V10-02-03 << 26 16-12-2015, SI, tag emdna-V10-01-56 856 * update of fast computation of: << 27 * Ionisation models : in SampleSecondaries: 857 -G4DNAScreenRutherfordElasticModel << 858 -G4DNAUeharaScreenRutherfordElasticModel << 859 by S. Okada (KEK, JP) << 860 << 861 17-02-2016, MK, tag emdna-V10-02-02 << 862 * G4MoleculeCounter: remove check of c++ versi << 863 << 864 16-12-2015, SI, tag emdna-V10-02-01 << 865 * Ionisation models : in SampleSecondaries: << 866 added protection on energy for interpolation m 28 added protection on energy for interpolation method change 867 29 868 16-12-2015, SI, tag emdna-V10-02-00 << 30 16-12-2015, SI 869 * G4DNAIonElasticModel::SampleSecondaries: add << 31 * G4DNAIonElasticModel::SampleSecondaries: added protection on 870 energy 32 energy 871 33 872 13-11-2015, MK, tag emdna-V10-01-55 34 13-11-2015, MK, tag emdna-V10-01-55 873 * G4MoleculeCounter::Use / InUse => move imple 35 * G4MoleculeCounter::Use / InUse => move implementation to source 874 file 36 file 875 37 876 10-11-2015, MK, tag emdna-V10-01-54 38 10-11-2015, MK, tag emdna-V10-01-54 877 * remove unused variables 39 * remove unused variables 878 40 879 10-11-2015, MK, tag emdna-V10-01-53 41 10-11-2015, MK, tag emdna-V10-01-53 880 * Coverity fixes 42 * Coverity fixes 881 43 882 06-11-2015, MK, tag emdna-V10-01-52 44 06-11-2015, MK, tag emdna-V10-01-52 883 * G4DNAWaterDissociationDisplacer: remove usel 45 * G4DNAWaterDissociationDisplacer: remove useless verbose 884 46 885 06-11-2015, MK, tag emdna-V10-01-51 47 06-11-2015, MK, tag emdna-V10-01-51 886 * G4FastList.hh : use WatcherSet::iterator to 48 * G4FastList.hh : use WatcherSet::iterator to avoid compilation errors 887 on x86_64-slc6-gcc49-Seq-BoundsCheck-UseIntern 49 on x86_64-slc6-gcc49-Seq-BoundsCheck-UseInternalCLHEP 888 50 889 06-11-2015, MK, tag emdna-V10-01-50 51 06-11-2015, MK, tag emdna-V10-01-50 890 * Avoid indirect include of G4TrackState to G4 52 * Avoid indirect include of G4TrackState to G4physicslists category 891 * Reorganize includes 53 * Reorganize includes 892 * Add G4ITStepProcessorState_Lock.hh 54 * Add G4ITStepProcessorState_Lock.hh 893 55 894 06-11-2015, MK, tag emdna-V10-01-49 56 06-11-2015, MK, tag emdna-V10-01-49 895 * G4MoleculeCounter: do not initialize compDou 57 * G4MoleculeCounter: do not initialize compDoubleWithPrecision::fPrecision 896 to other value than 0 - causing compilation er 58 to other value than 0 - causing compilation errors on windows 897 * G4DNAOneStepThermalizationModel: do not incl 59 * G4DNAOneStepThermalizationModel: do not include G4ITNavigator in the header 898 but in the source file - causing crashes on wi 60 but in the source file - causing crashes on windows 899 61 900 04-11-2015, MK, tag emdna-V10-01-48 62 04-11-2015, MK, tag emdna-V10-01-48 901 * G4DNARevertProbability: added and used in G4 63 * G4DNARevertProbability: added and used in G4DNAWaterDissociationDisplacer 902 * utils/sources.cmake: G4DNARevertProbability. 64 * utils/sources.cmake: G4DNARevertProbability.hh added 903 * G4DNAWaterDissociationDisplacer: fix and spe 65 * G4DNAWaterDissociationDisplacer: fix and speed up distributions 904 * models/GNUmakefile: add missing dependency 66 * models/GNUmakefile: add missing dependency 905 * G4DNAOneStepThermalizationModel: delete navi 67 * G4DNAOneStepThermalizationModel: delete navigator state when model 906 is deleted 68 is deleted 907 * G4FastList.icc: use typedef WatcherSet even 69 * G4FastList.icc: use typedef WatcherSet even when iterators are used 908 * G4ITModelProcessor: add RegisterModel, GetCo 70 * G4ITModelProcessor: add RegisterModel, GetComputeTimeStep + 909 fComputeTimeStep & fComputeReaction flags 71 fComputeTimeStep & fComputeReaction flags 910 * G4DNAElectronHoleRecombination: enable using << 72 * G4DNAElectronHoleRecombination: enable using this model even when not 911 all dissociation products have been defined 73 all dissociation products have been defined (they will just not be taken 912 into account) 74 into account) 913 * G4DNAMolecularReactionTable: delete reaction 75 * G4DNAMolecularReactionTable: delete reaction data when table is deleted 914 76 915 03-11-2015, MK, tag emdna-V10-01-47 77 03-11-2015, MK, tag emdna-V10-01-47 916 * G4Scheduler: Update time before G4ITStepProc 78 * G4Scheduler: Update time before G4ITStepProcessor::DoIt 917 * G4ITStepProcessor::DoIt : reset leading trac << 79 * G4ITStepProcessor::DoIt : reset leading tracks at the end of 918 the call 80 the call 919 81 920 03-11-2015, MK, tag emdna-V10-01-46 82 03-11-2015, MK, tag emdna-V10-01-46 921 * G4MolecularDissociation 83 * G4MolecularDissociation 922 * G4DNAOneStepSolvatationModel -> G4DNAOneStep 84 * G4DNAOneStepSolvatationModel -> G4DNAOneStepThermalizationModel 923 Avoid placing products outside volume of the 85 Avoid placing products outside volume of the mother track 924 (causing navigator complains) 86 (causing navigator complains) 925 << 87 926 03-11-2015, MK, tag emdna-V10-01-45 88 03-11-2015, MK, tag emdna-V10-01-45 927 * G4Serialize: Add definition in header for G4 89 * G4Serialize: Add definition in header for G4String 928 90 929 02-11-2015, MK, tag emdna-V10-01-44 91 02-11-2015, MK, tag emdna-V10-01-44 930 * G4Serialize: remove inline in front of templ 92 * G4Serialize: remove inline in front of template 931 * molecules: fix unit tests 93 * molecules: fix unit tests 932 * G4DNAElectronHoleRecombination: add missing 94 * G4DNAElectronHoleRecombination: add missing check on G4MoleculeCounter::InUse 933 * G4MoleculeCounter: add a flag to check or no 95 * G4MoleculeCounter: add a flag to check or not against scheduler time 934 * G4MoleculeTable: do not store G4MolecularCon << 96 * G4MoleculeTable: do not store G4MolecularConf anymore 935 -> G4MolecularConfMan is taking care of this 97 -> G4MolecularConfMan is taking care of this 936 << 98 937 30-10-2015, MK, tag emdna-V10-01-43 99 30-10-2015, MK, tag emdna-V10-01-43 938 * Bug solved in G4MoleculeCounter << 100 * Bug solved in G4MoleculeCounter 939 and made compatible wih G4DNAElectronHoleRec 101 and made compatible wih G4DNAElectronHoleRecombination (temporary) 940 * Unit tests corrected 102 * Unit tests corrected 941 * G4VITDiscreteProcess added 103 * G4VITDiscreteProcess added 942 * G4ReactionTableMessenger added 104 * G4ReactionTableMessenger added 943 * Intermediate update for 10.2 release 105 * Intermediate update for 10.2 release 944 << 106 945 27-10-2015, MK, tag emdna-V10-01-42 107 27-10-2015, MK, tag emdna-V10-01-42 946 * G4ITStepProcessor: clean dynamic_cast to G4V 108 * G4ITStepProcessor: clean dynamic_cast to G4VITProcess 947 << 109 948 26-10-2015, MK, tag emdna-V10-01-41 110 26-10-2015, MK, tag emdna-V10-01-41 949 * Sanche model: try to solve std::vector out o 111 * Sanche model: try to solve std::vector out of bounds 950 112 951 23-10-2015, MK, tag emdna-V10-01-40 113 23-10-2015, MK, tag emdna-V10-01-40 952 * remove all CLHEP::shared_ptr usage 114 * remove all CLHEP::shared_ptr usage 953 << 115 954 23-10-2015, CV, SM, tag emdna-V10-01-39 116 23-10-2015, CV, SM, tag emdna-V10-01-39 955 * Addded base class G4VDNAPTBModel << 117 * Addded base class G4VDNAPTBModel 956 118 957 28-09-2015, SI, tag emdna-V10-01-38 119 28-09-2015, SI, tag emdna-V10-01-38 958 * updated ion selection in G4DNARuddIonisation 120 * updated ion selection in G4DNARuddIonisationExtendedModel.cc for Z>2 959 121 960 19-09-2015, MK, tag emdna-V10-01-37 122 19-09-2015, MK, tag emdna-V10-01-37 961 * added proton ionisation scaling in G4DNABorn 123 * added proton ionisation scaling in G4DNABornIonisationModel1*.cc 962 * changed ion selection in G4DNARuddIonisation 124 * changed ion selection in G4DNARuddIonisationExtendedModel.cc for Z>2 963 125 964 17-09-2015, MK, tag emdna-V10-01-36 126 17-09-2015, MK, tag emdna-V10-01-36 965 * G4MoleculeGun: Remove compilation warnings 127 * G4MoleculeGun: Remove compilation warnings 966 128 967 04-09-2015 MK, tag emdna-V10-01-35 129 04-09-2015 MK, tag emdna-V10-01-35 968 * Fix G4MoleculeGun compilation errors 130 * Fix G4MoleculeGun compilation errors 969 131 970 03-09-2015 SI, tag emdna-V10-01-34 132 03-09-2015 SI, tag emdna-V10-01-34 971 * Added stationary regime to all inelastic mod 133 * Added stationary regime to all inelastic models 972 134 973 19-08-2015, MK 135 19-08-2015, MK 974 * Update G4MoleculeGun & G4MoleculeGunMessenge 136 * Update G4MoleculeGun & G4MoleculeGunMessenger: 975 - compatible with both Smoluchowski & Gilles 137 - compatible with both Smoluchowski & Gillespie models 976 138 977 15-08-2015, S.Incerti, tag emdna-V10-01-33 139 15-08-2015, S.Incerti, tag emdna-V10-01-33 978 * Added easier handling of cumulative proba. i 140 * Added easier handling of cumulative proba. in SR elastic models 979 141 980 13-08-2015, G.Cosmo, tag emdna-V10-01-32, 31 142 13-08-2015, G.Cosmo, tag emdna-V10-01-32, 31 981 * Fixed compilation warning on clang for misma 143 * Fixed compilation warning on clang for mismatch class/struct in 982 declaration of G4MoleculeShoot. 144 declaration of G4MoleculeShoot. 983 145 984 13-08-2015, G.Cosmo, tag emdna-V10-01-30 146 13-08-2015, G.Cosmo, tag emdna-V10-01-30 985 * Fixed compilation warning on clang for misma 147 * Fixed compilation warning on clang for mismatch class/struct in 986 declaration of G4MoleculeShootMessenger. 148 declaration of G4MoleculeShootMessenger. 987 149 988 12-08-2015, MK, tag emdna-V10-01-29 150 12-08-2015, MK, tag emdna-V10-01-29 989 * Add G4Serialize in the build tree temporaril 151 * Add G4Serialize in the build tree temporarily 990 152 991 12-08-2015, MK, tag emdna-V10-01-28 153 12-08-2015, MK, tag emdna-V10-01-28 992 * G4Serialize added 154 * G4Serialize added 993 155 994 12-08-2015, MK 156 12-08-2015, MK 995 * G4memory : quick removal of CLHEP::shared_pt 157 * G4memory : quick removal of CLHEP::shared_ptr dependency 996 158 997 24-07-2015, MK 159 24-07-2015, MK 998 - G4MolecularReactionTable 160 - G4MolecularReactionTable 999 * Add get methods 161 * Add get methods 1000 - G4MoleculeGun, G4MoleculeGunMessenger 162 - G4MoleculeGun, G4MoleculeGunMessenger 1001 * Molecule gun : place randomly in a box 163 * Molecule gun : place randomly in a box 1002 164 1003 15-07-2015, MK 165 15-07-2015, MK 1004 - G4DNAAttachment, G4DNAChargeDecrease, G4DNA << 166 - G4DNAAttachment, G4DNAChargeDecrease, G4DNADissociation, 1005 G4DNAExcitation, G4DNAIonisation 167 G4DNAExcitation, G4DNAIonisation 1006 * processes & models initialisation again 168 * processes & models initialisation again 1007 169 1008 15-07-2015, MK, tag emdna-V10-01-26 170 15-07-2015, MK, tag emdna-V10-01-26 1009 -G4ITModelProcessor & G4ITStepProcessor: 171 -G4ITModelProcessor & G4ITStepProcessor: 1010 * add macro to prevent warnings in non-verbo 172 * add macro to prevent warnings in non-verbose mode 1011 173 1012 11-07-2015, MK, tag emdna-V10-01-25 174 11-07-2015, MK, tag emdna-V10-01-25 1013 - Add G4IosFlagsSaver.hh to sources.cmake 175 - Add G4IosFlagsSaver.hh to sources.cmake 1014 - G4IosFlagsSaver.hh add an extra line of the 176 - G4IosFlagsSaver.hh add an extra line of the end of the file 1015 177 1016 10-07-2015, MK, tag emdna-V10-01-24 178 10-07-2015, MK, tag emdna-V10-01-24 1017 - G4DNA Processes : correct setup of energy b 179 - G4DNA Processes : correct setup of energy boundaries 1018 - G4DNAElectronHoleRecombination remove verbo 180 - G4DNAElectronHoleRecombination remove verbose 1019 - G4DNADingfelderChargeDecreaseModel: add hol 181 - G4DNADingfelderChargeDecreaseModel: add hole creation 1020 - G4DNAEmfietzoglouXModel: specify energy bou 182 - G4DNAEmfietzoglouXModel: specify energy boundaries in constructor 1021 183 1022 08-07-2015, MK, tag emdna-V10-01-23 184 08-07-2015, MK, tag emdna-V10-01-23 1023 - G4ITLeadingTracks added 185 - G4ITLeadingTracks added 1024 - G4ITSteppingVerbose added 186 - G4ITSteppingVerbose added 1025 - G4IosFlagsSaver added 187 - G4IosFlagsSaver added 1026 - G4VITSteppingVerbose & G4ITSteppingVerbose << 188 - G4VITSteppingVerbose & G4ITSteppingVerbose added 1027 * new UI command /chem/tracking/verbose 1,2 << 189 * new UI command /chem/tracking/verbose 1,2,3 ... 1028 - G4MoleculeDefinition: 190 - G4MoleculeDefinition: 1029 ::SetFormatedName added 191 ::SetFormatedName added 1030 ::NewConfiguration methods added 192 ::NewConfiguration methods added 1031 ::NewConfiguration added 193 ::NewConfiguration added 1032 ::AddDecayChannel per G4MolecularConfigurat 194 ::AddDecayChannel per G4MolecularConfiguration or conf label added 1033 And replace ::AddDecayChannel for a molecul 195 And replace ::AddDecayChannel for a molecule model 1034 ::Finalize added 196 ::Finalize added 1035 - G4MolecularConfiguration: << 197 - G4MolecularConfiguration: 1036 * new configuration can be defined by label 198 * new configuration can be defined by labels 1037 * Add Finalize method and add exception if 199 * Add Finalize method and add exception if attempt to modified 1038 the G4MolecularConfiguration is done after 200 the G4MolecularConfiguration is done after finalization 1039 - G4MolecularDissociationChannel & G4DNAMolec << 201 - G4MolecularDissociationChannel & G4DNAMolecularReactionTable & 1040 G4DNAMolecularEncounterStepper use G4Molecula << 202 G4DNAMolecularEncounterStepper use G4MolecularConfiguration rather 1041 than molecule models 203 than molecule models 1042 - G4Molecule add constructor where only G4Mol 204 - G4Molecule add constructor where only G4MolecularConfiguration is specified 1043 - G4Scheduler : remove entirely track specifi 205 - G4Scheduler : remove entirely track specification from this class 1044 - G4ITXProcess : deal with tracks 206 - G4ITXProcess : deal with tracks 1045 - G4ITTrackingManager is a "service" to start 207 - G4ITTrackingManager is a "service" to start and end tracking 1046 - G4DNAElectronHoleRecombination added 208 - G4DNAElectronHoleRecombination added 1047 209 1048 06-07-2015, Shogo Okada, SI, tag emdna-V10-01 210 06-07-2015, Shogo Okada, SI, tag emdna-V10-01-22 1049 - G4DNAEmfietzoglouIonisationModel: removed c << 211 - G4DNAEmfietzoglouIonisationModel: removed condition for 1050 fasterCode usage on shell selection. 212 fasterCode usage on shell selection. 1051 213 1052 26-06-2015, MK 214 26-06-2015, MK 1053 - G4DNAIonElasticModel: modify "validated" to << 215 - G4DNAIonElasticModel: modify "validated" to "activated" in 1054 warning message description 216 warning message description 1055 217 1056 16-06-205, MK 218 16-06-205, MK 1057 - Add G4Scheduler::GetGun() 219 - Add G4Scheduler::GetGun() 1058 220 1059 16-06-2015, MK, tag emdna-V10-01-21 221 16-06-2015, MK, tag emdna-V10-01-21 1060 - G4DNAElastic.cc : add elseif(name == ... 222 - G4DNAElastic.cc : add elseif(name == ... 1061 - G4DNAIonElasticModel: clean and fix double 223 - G4DNAIonElasticModel: clean and fix double free 1062 224 1063 12-06-2015, MK, tag emdna-V10-01-20 225 12-06-2015, MK, tag emdna-V10-01-20 1064 - remove virtual keyword from G4IT::GetPositi 226 - remove virtual keyword from G4IT::GetPosition() 1065 227 1066 04-06-2015, MK 228 04-06-2015, MK 1067 - just cosmetics 229 - just cosmetics 1068 - remove virtual keyword from G4IT::operator[ 230 - remove virtual keyword from G4IT::operator[] 1069 231 1070 26-05-2015, Robert Hatcher, tag emdna-V10-01- 232 26-05-2015, Robert Hatcher, tag emdna-V10-01-19 1071 - Remove unnecessary "using namespace std" fr 233 - Remove unnecessary "using namespace std" from various headers 1072 that causes problems w/ G4AnyMethod & G4Gen 234 that causes problems w/ G4AnyMethod & G4GenericPhysicsList 1073 when using clang and/or vc12 235 when using clang and/or vc12 1074 - Fully qualify std::string elsewhere as need 236 - Fully qualify std::string elsewhere as needed to adjust 1075 237 1076 22-05-2015, John Allison, tag emdna-V10-01-18 238 22-05-2015, John Allison, tag emdna-V10-01-18 1077 - G4ITTrackHolder.cc: Replaced "G4Threading:: 239 - G4ITTrackHolder.cc: Replaced "G4Threading::IsWorkerThread() == false" by 1078 "G4Threading::IsMasterThread()". 240 "G4Threading::IsMasterThread()". 1079 241 1080 17-05-2015, MK, tag emdna-V10-01-17 242 17-05-2015, MK, tag emdna-V10-01-17 1081 - G4DNABornIonisationModel1/2 & G4DNABornExci 243 - G4DNABornIonisationModel1/2 & G4DNABornExcitationModel2: remove unused variables 1082 - Correct sources.cmake 244 - Correct sources.cmake 1083 - Born headears: includes both model versions << 245 - Born headears: includes both model versions when proxy header is included 1084 246 1085 16-05-2015, MK, tag emdna-V10-01-16 247 16-05-2015, MK, tag emdna-V10-01-16 1086 - Add G4DNAEmfietzoglouExcitationModel 248 - Add G4DNAEmfietzoglouExcitationModel 1087 - Add G4DNAEmfietzoglouIonisationModel 249 - Add G4DNAEmfietzoglouIonisationModel 1088 - Add G4DNAUeharaScreenedRutherfordElasticMod 250 - Add G4DNAUeharaScreenedRutherfordElasticModel 1089 - Add G4DNABornIonisationModel2 (temporary) 251 - Add G4DNABornIonisationModel2 (temporary) 1090 - Add G4DNABornExcitationModel2 (temporary) 252 - Add G4DNABornExcitationModel2 (temporary) 1091 253 1092 15-05-2015, MK, tag emdna-V10-01-15 254 15-05-2015, MK, tag emdna-V10-01-15 1093 - Postpone G4DNASmoluchowskiDiffusion until c 255 - Postpone G4DNASmoluchowskiDiffusion until c++11 is adopted 1094 256 1095 14-05-2015, MK, tag emdna-V10-01-14 257 14-05-2015, MK, tag emdna-V10-01-14 1096 - G4DNASmoluchowskiDiffusion: std::sqrt -> sq 258 - G4DNASmoluchowskiDiffusion: std::sqrt -> sqrt 1097 259 1098 14-05-2015, MK, tag emdna-V10-01-13 260 14-05-2015, MK, tag emdna-V10-01-13 1099 - G4DNASmoluchowskiDiffusion: try to solve co 261 - G4DNASmoluchowskiDiffusion: try to solve compilation error 1100 - G4ITReaction: try to solve compilation erro 262 - G4ITReaction: try to solve compilation error 1101 263 1102 12-05-2015, MK, tag emdna-V10-01-12 264 12-05-2015, MK, tag emdna-V10-01-12 1103 - G4DNASmoluchowskiDiffusion: try to solve co 265 - G4DNASmoluchowskiDiffusion: try to solve compilation error 1104 266 1105 12-05-2015, MK, tag emdna-V10-01-11 267 12-05-2015, MK, tag emdna-V10-01-11 1106 - Add G4DNASmoluchowskiDiffusion to the build 268 - Add G4DNASmoluchowskiDiffusion to the build tree 1107 269 1108 11-05-2015, MK, tag emdna-V10-01-10 270 11-05-2015, MK, tag emdna-V10-01-10 1109 - G4DNABornExcitationModel: 271 - G4DNABornExcitationModel: 1110 +Add GetPartialCrossSection 272 +Add GetPartialCrossSection 1111 +Code cleaning 273 +Code cleaning 1112 - G4DNAMillerGreenExcitationModel: 274 - G4DNAMillerGreenExcitationModel: 1113 +Add GetPartialCrossSection 275 +Add GetPartialCrossSection 1114 - G4DNAChemistryManager::GetValue(...) added 276 - G4DNAChemistryManager::GetValue(...) added 1115 277 1116 02-05-2015, MK 278 02-05-2015, MK 1117 - Update G4TrackState & related classes 279 - Update G4TrackState & related classes 1118 - G4DNABrownianTransportation: << 280 - G4DNABrownianTransportation: 1119 +Add constructor & destructor to G4Brownian << 281 +Add constructor & destructor to G4BrownianAction 1120 +comment useless method 282 +comment useless method 1121 - G4Scheduler: << 283 - G4Scheduler: 1122 +Add fStopTime+Watched times+PrintWhyDoYouS << 284 +Add fStopTime+Watched times+PrintWhyDoYouStop method (code was existing before) 1123 +remove fTmpEndTime << 285 +remove fTmpEndTime 1124 +Add CanICarryOn 286 +Add CanICarryOn 1125 - add G4DNASmoluchowskiDiffusion *PRELIMINARY 287 - add G4DNASmoluchowskiDiffusion *PRELIMINARY* 1126 288 1127 18-03-2015, MK, tag emdna-V10-01-08 289 18-03-2015, MK, tag emdna-V10-01-08 1128 - Same as before, just add the missing Histor 290 - Same as before, just add the missing History file 1129 291 1130 18-03-2015, MK, tag emdna-V10-01-07 292 18-03-2015, MK, tag emdna-V10-01-07 1131 - G4UserTimeStepAction::UserReactionAction : 293 - G4UserTimeStepAction::UserReactionAction : vector of products becomes a pointer 1132 instead of a reference 294 instead of a reference 1133 295 1134 12-02-2015, MK, tag emdna-V10-01-06 296 12-02-2015, MK, tag emdna-V10-01-06 1135 - G4ITReaction: Remove "gAll" introduced for 297 - G4ITReaction: Remove "gAll" introduced for testing 1136 - G4ITModelProcessor: Remove "assert" introdu 298 - G4ITModelProcessor: Remove "assert" introduced for testing 1137 - G4ITTransportation: Remove extra parenthesi << 299 - G4ITTransportation: Remove extra parenthesis in the undef of PrepareState 1138 300 1139 11-02-2015, MK, tag emdna-V10-01-05 301 11-02-2015, MK, tag emdna-V10-01-05 1140 - Fix reproductibility of the chemistry modul 302 - Fix reproductibility of the chemistry module 1141 - Fix the "no reaction table found" bug: G4IT 303 - Fix the "no reaction table found" bug: G4ITReaction class created 1142 - G4shared_ptr refers to std::shared_ptr when 304 - G4shared_ptr refers to std::shared_ptr when C++11 is activated 1143 305 1144 16-01-2015, SI, tag emdna-V10-01-04 306 16-01-2015, SI, tag emdna-V10-01-04 1145 - added Fe56 into G4DNARuddIonisationExtended 307 - added Fe56 into G4DNARuddIonisationExtendedModel 1146 308 1147 14-12-2014, MK, tag emdna-V10-01-03 309 14-12-2014, MK, tag emdna-V10-01-03 1148 - BornIonisation: correct array cleaning 310 - BornIonisation: correct array cleaning 1149 - ScreenRutherfordElastic: correct retrieval << 311 - ScreenRutherfordElastic: correct retrieval of water density 1150 312 1151 13-12-2014, SI, tag emdna-V10-01-02 313 13-12-2014, SI, tag emdna-V10-01-02 1152 - Added elastic model by H. Tran. 314 - Added elastic model by H. Tran. 1153 315 1154 12-12-2014, G.Cosmo, tag emdna-V10-01-01 316 12-12-2014, G.Cosmo, tag emdna-V10-01-01 1155 - Explicitly initialise to zero TLS pointers 317 - Explicitly initialise to zero TLS pointers in G4KDNode.hh and G4ITFinder.icc 1156 to allow for compilation on Linux/clang-3.5 318 to allow for compilation on Linux/clang-3.5. 1157 319 1158 05-12-2014, G.Cosmo, tag emdna-V10-01-00 320 05-12-2014, G.Cosmo, tag emdna-V10-01-00 1159 - Corrected sources.cmake in management and m 321 - Corrected sources.cmake in management and molecules/management, to 1160 include missing files: 322 include missing files: 1161 G4ITTransportationManager.icc 323 G4ITTransportationManager.icc 1162 G4KDNode.icc 324 G4KDNode.icc 1163 G4KDTree.icc 325 G4KDTree.icc 1164 G4MoleculeFinder.hh 326 G4MoleculeFinder.hh 1165 327 1166 01-12-2014, MK, tag emdna-V10-00-63 328 01-12-2014, MK, tag emdna-V10-00-63 1167 - Temporary fix for avoiding bad relocation o 329 - Temporary fix for avoiding bad relocation of Brownian particles 1168 It slows the computation by forcing the Brown 330 It slows the computation by forcing the Brownian particles to stop at the volumes' boundaries 1169 - Transform fStopAndAlive to fStopAndKill in 331 - Transform fStopAndAlive to fStopAndKill in G4DNABrownianTransportation 1170 when the particle has reached a boundary 332 when the particle has reached a boundary 1171 333 1172 28-11-2014, MK, tag emdna-V10-00-62 334 28-11-2014, MK, tag emdna-V10-00-62 1173 - Retag 335 - Retag 1174 336 1175 28-11-2014, MK, tag emdna-V10-00-61 337 28-11-2014, MK, tag emdna-V10-00-61 1176 - Fix chemistry initialization in standalone 338 - Fix chemistry initialization in standalone 1177 - Fix Brownian navigation 339 - Fix Brownian navigation 1178 - Some fixes related to scheduler 340 - Some fixes related to scheduler 1179 - Rename macro commands to reflect usage of s 341 - Rename macro commands to reflect usage of scheduler 1180 - Enhance comments 342 - Enhance comments 1181 343 1182 24-11-2014, MK, tag emdna-V10-00-60 344 24-11-2014, MK, tag emdna-V10-00-60 1183 - Remove a useless but also fatal (when chemi 345 - Remove a useless but also fatal (when chemistry is not activated) exception 1184 346 1185 24-11-2014, MK, tag emdna-V10-00-59 347 24-11-2014, MK, tag emdna-V10-00-59 1186 - Enhance doxygen comments in G4DNABrownianTr 348 - Enhance doxygen comments in G4DNABrownianTransportation 1187 - Remove useless verbose 349 - Remove useless verbose 1188 - Try to compile on all platforms 350 - Try to compile on all platforms 1189 - Correct initialization of G4DNAChemistryMan 351 - Correct initialization of G4DNAChemistryManager 1190 - Simplify initialization of chemistry from u 352 - Simplify initialization of chemistry from user applications 1191 Just registering constructor is enough to i 353 Just registering constructor is enough to initialized the chemistry 1192 354 1193 24-11-2014, MK, tag emdna-V10-00-58 355 24-11-2014, MK, tag emdna-V10-00-58 1194 - G4FastList: remove all friend declarations 356 - G4FastList: remove all friend declarations 1195 357 1196 22-11-2014, MK, tag emdna-V10-00-57 358 22-11-2014, MK, tag emdna-V10-00-57 1197 - Another attempt to compile G4FastList on al 359 - Another attempt to compile G4FastList on all platforms 1198 360 1199 22-11-2014, MK, tag emdna-V10-00-56 361 22-11-2014, MK, tag emdna-V10-00-56 1200 - Attempt to compile G4FastList on all platfo 362 - Attempt to compile G4FastList on all platforms 1201 363 1202 21-11-2014, MK, tag emdna-V10-00-55 364 21-11-2014, MK, tag emdna-V10-00-55 1203 - Attempt to compile G4FastList with clang 365 - Attempt to compile G4FastList with clang 1204 366 1205 21-11-2014, MK, tag emdna-V10-00-54 367 21-11-2014, MK, tag emdna-V10-00-54 1206 - Put back G4DNABrownianTransportation::fUseM 368 - Put back G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary 1207 to true as long as the small distances to bou << 369 to true as long as the small distances to boundaries sent back by the navigator 1208 are not understood 370 are not understood 1209 - Update G4ITNavigator2 to the G4Navigator of 371 - Update G4ITNavigator2 to the G4Navigator of John 1210 372 1211 21-11-2014, MK, tag emdna-V10-00-53 373 21-11-2014, MK, tag emdna-V10-00-53 1212 - Attempt to solve the 'No track found' bug b << 374 - Attempt to solve the 'No track found' bug by using G4FastList and 1213 G4ManyFastLists - A 'list watcher' is added 375 G4ManyFastLists - A 'list watcher' is added 1214 - G4DNABrownianTransportation::fUseMaximumTim 376 - G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary 1215 is false by default --> uses the random time << 377 is false by default --> uses the random time computation for crossing 1216 boundaries 378 boundaries 1217 379 1218 20-11-2014, SI, tag emdna-V10-00-52 380 20-11-2014, SI, tag emdna-V10-00-52 1219 - Improved error message for missing data in 381 - Improved error message for missing data in PW elastic model 1220 382 1221 08-11-2014, MK, tag emdna-V10-00-51 383 08-11-2014, MK, tag emdna-V10-00-51 1222 - Add an exception in G4MoleculeTable::GetMod 384 - Add an exception in G4MoleculeTable::GetModel/GetDefinition 1223 when the asked item is not found 385 when the asked item is not found 1224 386 1225 03-11-2014 MK, tag emdna-V10-00-50 387 03-11-2014 MK, tag emdna-V10-00-50 1226 - correct track creation by G4MoleculeGunMess 388 - correct track creation by G4MoleculeGunMessenger 1227 389 1228 03-11-2014 MK, tag emdna-V10-00-49 390 03-11-2014 MK, tag emdna-V10-00-49 1229 - Remove useless classes 391 - Remove useless classes 1230 - Correct a bug in G4MoleculeGun 392 - Correct a bug in G4MoleculeGun 1231 393 1232 28-10-2014 PA, tag emdna-V10-00-48 394 28-10-2014 PA, tag emdna-V10-00-48 1233 - correct compilation warnings 395 - correct compilation warnings 1234 396 1235 28-10-2014 PA, tag emdna-V10-00-47 397 28-10-2014 PA, tag emdna-V10-00-47 1236 - correct compilation warnings 398 - correct compilation warnings 1237 399 1238 28-10-2014 PA, tag emdna-V10-00-46 400 28-10-2014 PA, tag emdna-V10-00-46 1239 - correction in sources.cmake 401 - correction in sources.cmake 1240 402 1241 28-10-2014 PA, tag emdna-V10-00-45 403 28-10-2014 PA, tag emdna-V10-00-45 1242 - retag to add LEPTS 404 - retag to add LEPTS 1243 405 1244 28-10-2014 PA, tag emdna-V10-00-44 406 28-10-2014 PA, tag emdna-V10-00-44 1245 - add LEPTS 407 - add LEPTS 1246 408 1247 25-10-2014 MK, tag emdna-V10-00-43 409 25-10-2014 MK, tag emdna-V10-00-43 1248 - remove useless G4VITScheduler 410 - remove useless G4VITScheduler 1249 411 1250 25-10-2014 MK, tag emdna-V10-00-42 412 25-10-2014 MK, tag emdna-V10-00-42 1251 - correct warnings 413 - correct warnings 1252 414 1253 24-10-2014 MK, tag emdna-V10-00-41 415 24-10-2014 MK, tag emdna-V10-00-41 1254 - G4ITTimeStepper-->G4VScheduler 416 - G4ITTimeStepper-->G4VScheduler 1255 - G4ITStepManager-->G4ITScheduler 417 - G4ITStepManager-->G4ITScheduler 1256 - G4ITStepManager-->G4ITSchedulerMessenger 418 - G4ITStepManager-->G4ITSchedulerMessenger 1257 - G4AllITManager & G4ITManager deleted 419 - G4AllITManager & G4ITManager deleted 1258 - G4ITFinder added 420 - G4ITFinder added 1259 - G4VITTrackHolder added 421 - G4VITTrackHolder added 1260 - G4ITTrackHolder implemented 422 - G4ITTrackHolder implemented 1261 - code cleaned + useless classes removed 423 - code cleaned + useless classes removed 1262 424 1263 24-10-2014 MK, tag emdna-V10-00-40 425 24-10-2014 MK, tag emdna-V10-00-40 1264 - G4ITStepManager: remove verbose at closure 426 - G4ITStepManager: remove verbose at closure time 1265 427 1266 21-10-2014 MK, tag emdna-V10-00-39 428 21-10-2014 MK, tag emdna-V10-00-39 1267 - try to solve crash at closure time 429 - try to solve crash at closure time 1268 430 1269 21-10-2014 MK, tag emdna-V10-00-38 431 21-10-2014 MK, tag emdna-V10-00-38 1270 - remove G4MolecularConfiguration from the ma 432 - remove G4MolecularConfiguration from the manager's 1271 table when deleted 433 table when deleted 1272 - update disclaimer 434 - update disclaimer 1273 435 1274 17-10-2014 MK, tag emdna-V10-00-37 436 17-10-2014 MK, tag emdna-V10-00-37 1275 - clean code 437 - clean code 1276 - G4ITStepManager: one can ask why simulation 438 - G4ITStepManager: one can ask why simulation stops 1277 - remove useless verbose 439 - remove useless verbose 1278 440 1279 17-10-2014 MK, tag emdna-V10-00-36 441 17-10-2014 MK, tag emdna-V10-00-36 1280 - Call G4ITTimeStepper in ChemMan::InitMaster 442 - Call G4ITTimeStepper in ChemMan::InitMaster 1281 - Remove inappropriate method in G4ITTrackHol 443 - Remove inappropriate method in G4ITTrackHolder 1282 - G4DNASecondOrderReaction uses G4ITTimeStepp 444 - G4DNASecondOrderReaction uses G4ITTimeStepper::GetTimeStep 1283 445 1284 10-10-2014 MK, tag emdna-V10-00-35 446 10-10-2014 MK, tag emdna-V10-00-35 1285 Avoid use of std::map at the applicatio 447 Avoid use of std::map at the application level in TimeStepAction 1286 448 1287 07-10-2014 MK, tag emdna-V10-00-34 449 07-10-2014 MK, tag emdna-V10-00-34 1288 G4MolecularReactionTable : translate fr 450 G4MolecularReactionTable : translate from french to english 1289 G4DNAChemistryManager : remove usage of 451 G4DNAChemistryManager : remove usage of G4ITStepManager 1290 G4ITTimeStepper : use temporally as int 452 G4ITTimeStepper : use temporally as interface to G4ITStepManager 1291 453 1292 07-10-2014 MK, tag emdna-V10-00-33 454 07-10-2014 MK, tag emdna-V10-00-33 1293 Initialize G4ITStepManager in G4DNAChem 455 Initialize G4ITStepManager in G4DNAChemistryManager 1294 456 1295 17-09-2014 MK, tag emdna-V10-00-32 457 17-09-2014 MK, tag emdna-V10-00-32 1296 Add G4ITStepManager + messenger 458 Add G4ITStepManager + messenger 1297 Tag before architecture change 459 Tag before architecture change 1298 460 1299 12-07-2014 SI, tag emdna-V10-00-31 461 12-07-2014 SI, tag emdna-V10-00-31 1300 Removed obsolete class for electr 462 Removed obsolete class for electron excitation 1301 463 1302 27-06-2014 GCosmo, tag emdna-V10-00-30 464 27-06-2014 GCosmo, tag emdna-V10-00-30 1303 - Get rid of obsolete 'register' keywor 465 - Get rid of obsolete 'register' keyword in code. 1304 466 1305 05-06-2014 SI, tag emdna-V10-00-29 467 05-06-2014 SI, tag emdna-V10-00-29 1306 - added include of <deque> in G4DNAMill 468 - added include of <deque> in G4DNAMillerGreenExcitationModel.hh 1307 - updated G4DNAIonisation and G4D << 469 - updated G4DNAIonisation and G4DNARuddIonisationExtendModel for 1308 G4GenericIon usage 470 G4GenericIon usage 1309 - requires G4EMLOW6.39 471 - requires G4EMLOW6.39 1310 472 1311 04-06-2014 MK, tag emdna-V10-00-28 473 04-06-2014 MK, tag emdna-V10-00-28 1312 Remove directory management/include/imp 474 Remove directory management/include/impl 1313 Prepare for release 475 Prepare for release 1314 476 1315 04-06-2014 MK, tag emdna-V10-00-27 477 04-06-2014 MK, tag emdna-V10-00-27 1316 Resolve several defects pointed o 478 Resolve several defects pointed out by coverity 1317 Add interface G4ITTimeStepper 479 Add interface G4ITTimeStepper 1318 Avoid usage of molecule iterators 480 Avoid usage of molecule iterators as pointers 1319 481 1320 03-06-2014 SI, tag emdna-V10-00-26 482 03-06-2014 SI, tag emdna-V10-00-26 1321 Switched to DNAion for Si in 483 Switched to DNAion for Si in G4DNAGenericIonsManager 1322 484 1323 28-05-2014 VI, SI tag emdna-V10-00-25 485 28-05-2014 VI, SI tag emdna-V10-00-25 1324 Added G4DNABornAngle and G4DN 486 Added G4DNABornAngle and G4DNARuddAngle generators; 1325 Ionisation models switch to u 487 Ionisation models switch to use angular generator 1326 interface 488 interface 1327 489 1328 12.05.2014 MK, tag emdna-V10-00-24 490 12.05.2014 MK, tag emdna-V10-00-24 1329 Try to remove warnings 4 491 Try to remove warnings 4 1330 492 1331 12.05.2014 MK, tag emdna-V10-00-23 493 12.05.2014 MK, tag emdna-V10-00-23 1332 Try to remove warnings 3 494 Try to remove warnings 3 1333 495 1334 12.05.2014 MK, tag emdna-V10-00-22 496 12.05.2014 MK, tag emdna-V10-00-22 1335 Try to remove warnings 2 497 Try to remove warnings 2 1336 498 1337 12.05.2014 MK, tag emdna-V10-00-21 499 12.05.2014 MK, tag emdna-V10-00-21 1338 Try to remove warnings 500 Try to remove warnings 1339 501 1340 09.05.2014 S. Incerti, tag emdna-V10-00-20 502 09.05.2014 S. Incerti, tag emdna-V10-00-20 1341 Added Si to G4DNARuddIonisationEx << 503 Added Si to G4DNARuddIonisationExtendedModel 1342 on behalf of Z. Francis 504 on behalf of Z. Francis 1343 G4EMLOW6.38 needed 505 G4EMLOW6.38 needed 1344 506 1345 07-04-2014 SI tag emdna-V10-00-19 507 07-04-2014 SI tag emdna-V10-00-19 1346 Changed faster method interpolation in 508 Changed faster method interpolation in 1347 G4DNABornIonisationModel << 509 G4DNABornIonisationModel 1348 510 1349 04-04-2014 G.Cosmo tag emdna-V10-00-1 511 04-04-2014 G.Cosmo tag emdna-V10-00-18 1350 Removed problematic #define in G4TrackS 512 Removed problematic #define in G4TrackState.hh causing errors on 1351 Windows for overriding of system keywor 513 Windows for overriding of system keyword 'Handle'... 1352 Corrected order of inclusion of some he 514 Corrected order of inclusion of some headers and use of <>/"". 1353 515 1354 04-04-2014 MK tag emdna-V10-00-17 516 04-04-2014 MK tag emdna-V10-00-17 1355 Try to solve warnings when G4VERBOSE is 517 Try to solve warnings when G4VERBOSE is off 1356 518 1357 02-04-2014 MK tag emdna-V10 519 02-04-2014 MK tag emdna-V10-00-16 1358 G4ITSafetyHelper: Force usage of G4Path 520 G4ITSafetyHelper: Force usage of G4PathFinder for now 1359 521 1360 02-04-2014 MK tag emdna-V10 522 02-04-2014 MK tag emdna-V10-00-15 1361 Add preprocessor flags on files in dev 523 Add preprocessor flags on files in dev to prevent build errors with gmake 1362 524 1363 02-04-2014 MK tag emdna-V10 525 02-04-2014 MK tag emdna-V10-00-14 1364 - on mac: template parameter declared a 526 - on mac: template parameter declared as a friend class is supported only with c++11 which causes a warning 1365 -> this part is withdrawn for now 527 -> this part is withdrawn for now 1366 528 1367 02-04-2014 MK tag emdna-V10 529 02-04-2014 MK tag emdna-V10-00-13 1368 - version 2 : try fixing the build erro 530 - version 2 : try fixing the build error on mac 1369 531 1370 02-04-2014 MK tag emdna-V10 532 02-04-2014 MK tag emdna-V10-00-12 1371 - version 1 : try to fix build errors a 533 - version 1 : try to fix build errors and warnings on mac 1372 534 1373 02-04-2014 MK tag emdna-V10 535 02-04-2014 MK tag emdna-V10-00-11 1374 - try to fix build error on windows pla 536 - try to fix build error on windows platform - 3 1375 (G4MemStat & G4MolecularConfiguration) 537 (G4MemStat & G4MolecularConfiguration) 1376 538 1377 02-04-2014 MK tag emdna-V10 539 02-04-2014 MK tag emdna-V10-00-10 1378 - try to fix build error on windows pla 540 - try to fix build error on windows platform - 2 1379 (problem coming from having as a friend 541 (problem coming from having as a friend class a template argument) 1380 542 1381 02-04-2014 MK tag emdna-V10 543 02-04-2014 MK tag emdna-V10-00-09 1382 - try to fix build error on windows pla << 544 - try to fix build error on windows platform 1383 545 1384 01-04-2014 MK tag emdna-V10 546 01-04-2014 MK tag emdna-V10-00-08 1385 - G4DNAChemistryManager.cc: remove a G4 547 - G4DNAChemistryManager.cc: remove a G4cout in destructor causing a crash in test60 1386 - G4TrackState.hh: change 'typename' to 548 - G4TrackState.hh: change 'typename' to 'class' in template argument of typewrapper 1387 549 1388 01-04-2014 MK tag emdna-V10 550 01-04-2014 MK tag emdna-V10-00-07 1389 - reset CMakeLists.txt 551 - reset CMakeLists.txt 1390 552 1391 01-04-2014 MK tag emdna-V10 553 01-04-2014 MK tag emdna-V10-00-06 1392 - update chemistry 554 - update chemistry 1393 555 1394 01-04-2014 SI tag emdna-V10-00-05 556 01-04-2014 SI tag emdna-V10-00-05 1395 - Modified calculation of secondary kin 557 - Modified calculation of secondary kinetic for fast code 1396 558 1397 27-03-2014 G.Cosmo tag emdna-V10-00-04 559 27-03-2014 G.Cosmo tag emdna-V10-00-04 1398 - Corrected inclusion order of headers 560 - Corrected inclusion order of headers and forward declations 1399 in G4MolecularConfiguration. 561 in G4MolecularConfiguration. 1400 - Corrected typo in DLL import flag in 562 - Corrected typo in DLL import flag in G4DNAWaterDissociationDisplacer.hh. 1401 563 1402 25-03-2014 VS, SI tag emdna-V10-00-03 564 25-03-2014 VS, SI tag emdna-V10-00-03 1403 - Added several clear() to vectors for 565 - Added several clear() to vectors for MT 1404 566 1405 17-03-2014 SI tag emdna-V10-00-02 567 17-03-2014 SI tag emdna-V10-00-02 1406 - Modified G4DNAChampionElasticModel.cc << 568 - Modified G4DNAChampionElasticModel.cc to read 1407 high precision diff. cumulated 569 high precision diff. cumulated cross section 1408 to be used with G4EMLOW6.36 570 to be used with G4EMLOW6.36 1409 571 1410 12-12-2013 M.K tag emdna-V10-00-01 572 12-12-2013 M.K tag emdna-V10-00-01 1411 - G4DNAMolecularMaterial: Remove unused 573 - G4DNAMolecularMaterial: Remove unused variable 1412 574 1413 12-12-2013 M.K tag emdna-V10-00-00 575 12-12-2013 M.K tag emdna-V10-00-00 1414 - G4DNAMolecularMaterial is modified to << 576 - G4DNAMolecularMaterial is modified to prevent segmentation fault in case 1415 a model is not created at initialisatio 577 a model is not created at initialisation time 1416 578 1417 21-11-2013 V.I. tag emdna-V09-06-22 579 21-11-2013 V.I. tag emdna-V09-06-22 1418 - G4ITStepProcessor2 - removed ob 580 - G4ITStepProcessor2 - removed obsolete unused header 1419 581 1420 01-11-2013 M.K tag emdna-V09-06-21 582 01-11-2013 M.K tag emdna-V09-06-21 1421 - Correct incorrect singleton che 583 - Correct incorrect singleton check introduced in previous tag 1422 584 1423 01-11-2013 M.K tag emdna-V09-06-20 585 01-11-2013 M.K tag emdna-V09-06-20 1424 - Prepare for release bis 586 - Prepare for release bis 1425 587 1426 01-11-2013 M.K tag emdna-V09-06-19 588 01-11-2013 M.K tag emdna-V09-06-19 1427 - Prepare for release 589 - Prepare for release 1428 590 1429 10-10-2013 M.K. tag emdna-V09-06-18 591 10-10-2013 M.K. tag emdna-V09-06-18 1430 - Remove G4VERBOSE testing in G4D 592 - Remove G4VERBOSE testing in G4DNABrownianTransportation::BuildPhysicsTable 1431 593 1432 06-10-2013 M.K. tag emdna-V09-06-17 594 06-10-2013 M.K. tag emdna-V09-06-17 1433 - Same as before once again 595 - Same as before once again 1434 596 1435 03-10-2013 M.K. tag emdna-V09-06-16 597 03-10-2013 M.K. tag emdna-V09-06-16 1436 - Same as before 598 - Same as before 1437 599 1438 03-10-2013 M.K. tag emdna-V09-06-15 600 03-10-2013 M.K. tag emdna-V09-06-15 1439 - Improve MT compatibility 601 - Improve MT compatibility 1440 - Enhance G4DNAChemistryManager to be t << 602 - Enhance G4DNAChemistryManager to be the main interface used 1441 by the user - stage 1 603 by the user - stage 1 1442 604 1443 14-09-2013 M.Asai tag emdna-V09-06-14 605 14-09-2013 M.Asai tag emdna-V09-06-14 1444 G4VProcess::SubtractNumberOfInter 606 G4VProcess::SubtractNumberOfInteractionLengthLeft() is no longer 1445 a virtual methood since v9.6 and 607 a virtual methood since v9.6 and thus it must not be overwritten 1446 with virtual keyword in G4VITProc 608 with virtual keyword in G4VITProcess. 1447 609 1448 12-09-2013 M.K. tag emdna-V09-06-13 610 12-09-2013 M.K. tag emdna-V09-06-13 1449 Correction of an inadvertent modificati 611 Correction of an inadvertent modification introduced in previous tag 1450 612 1451 12-09-2013 M.K. tag emdna-V09-06-12 613 12-09-2013 M.K. tag emdna-V09-06-12 1452 Correct bound checks in G4ITManager.icc 614 Correct bound checks in G4ITManager.icc 1453 615 1454 16-08-2013 S.I. tag emdna-V09-06-11 616 16-08-2013 S.I. tag emdna-V09-06-11 1455 Adapted G4DNAGenericIonsManager to use 617 Adapted G4DNAGenericIonsManager to use of G4DNAIons 1456 618 1457 16-08-2013 S.I. tag emdna-V09-06-10 619 16-08-2013 S.I. tag emdna-V09-06-10 1458 Added G4DNAIons 620 Added G4DNAIons 1459 621 1460 25-06-2013 M.K. tag emdna-V09-06-09 622 25-06-2013 M.K. tag emdna-V09-06-09 1461 G4MoleculeID: Rectify initialization 623 G4MoleculeID: Rectify initialization 1462 G4MoleculeCounter: Automatic switch bet << 624 G4MoleculeCounter: Automatic switch between unique_ptr or 1463 auto_ptr according to c++ std version 625 auto_ptr according to c++ std version 1464 626 1465 11-06-2013 G.Cosmo tag emdna-V09-06- 627 11-06-2013 G.Cosmo tag emdna-V09-06-08 1466 Corrected static initialisation i 628 Corrected static initialisation in G4VMolecularDecayDisplacer 1467 for problem accidentally introduc 629 for problem accidentally introduced in previous tag. 1468 630 1469 11-06-2013 G.Cosmo tag emdna-V09-06- 631 11-06-2013 G.Cosmo tag emdna-V09-06-07 1470 Cleanup from automatic changes fo 632 Cleanup from automatic changes for MT in classes G4Molecule, 1471 G4VMolecularDecayDisplacer, G4IT, 633 G4VMolecularDecayDisplacer, G4IT, G4ITModelProcessor, G4VITProcess, 1472 G4ITTransportation, G4DNAChemistr 634 G4ITTransportation, G4DNAChemistryManager, and porting MT 1473 compilation on Windows. 635 compilation on Windows. 1474 636 1475 06-06-2013 S.I. tag emdna-V09-06- 637 06-06-2013 S.I. tag emdna-V09-06-06 1476 Updated G4DNABornIonisationModel 638 Updated G4DNABornIonisationModel for speedup option 1477 Requires G4EMLOW version 6.33 639 Requires G4EMLOW version 6.33 1478 640 1479 25-05-2013 M.K. tag emdna-V09-06- 641 25-05-2013 M.K. tag emdna-V09-06-05 1480 *Fix warning compilation in G4KDM 642 *Fix warning compilation in G4KDMap for specific gcc version 1481 643 1482 24-05-2013 M.K. tag emdna-V09-06- 644 24-05-2013 M.K. tag emdna-V09-06-04 1483 * Track state class updated to fi << 645 * Track state class updated to fix compilation errors on mac 1484 but still not in usage 646 but still not in usage 1485 647 1486 23-05-2013 M.K. tag emdna-V09-06- 648 23-05-2013 M.K. tag emdna-V09-06-03 1487 * G4KDMap : try fix error on std: 649 * G4KDMap : try fix error on std:ceil call on windows 1488 650 1489 23-V09-06-03-05-2013 M.K. tag emd 651 23-V09-06-03-05-2013 M.K. tag emdna-V09-06-02 1490 * G4KDMap : used deque::iterator 652 * G4KDMap : used deque::iterator 1491 653 1492 654 1493 22-05-2013 M.K. tag emdna-V09-06- 655 22-05-2013 M.K. tag emdna-V09-06-01 1494 * Correct warning from G4KDTree.cc 656 * Correct warning from G4KDTree.cc 1495 * G4KDMap : pop out elements from map 657 * G4KDMap : pop out elements from map 1496 658 1497 22-05-2013 M.K. tag emdna-V09-06-00 659 22-05-2013 M.K. tag emdna-V09-06-00 1498 * !!! MT !!!! Promoted to thread-global << 660 * !!! MT !!!! Promoted to thread-global storage : 1499 --> G4DNAGenericIonManager << 661 --> G4DNAGenericIonManager 1500 --> G4DNAMolecularMaterial 662 --> G4DNAMolecularMaterial 1501 --> G4DNAMolecularReactionTable 663 --> G4DNAMolecularReactionTable 1502 * G4KDMap added 664 * G4KDMap added 1503 * G4DNASmoluchowskiReactionModel : exce 665 * G4DNASmoluchowskiReactionModel : exception description enhanced 1504 * G4ITTrackingInteractivity : "Initiali << 666 * G4ITTrackingInteractivity : "Initialize()" method added for simplify 1505 initialization of daughter classes << 667 intialization of daughter classes 1506 * G4DNAChemistryManager : AddEmptyLineI << 668 * G4DNAChemistryManager : AddEmptyLineInOuputFile method added 1507 669 1508 12-11-2012 M.K tag emdna-V09-05- 670 12-11-2012 M.K tag emdna-V09-05-35 1509 Remove unnecessary abort() and ex 671 Remove unnecessary abort() and exit(-1) previously introduced to avoid 1510 coverity warnings (rev 64993) 672 coverity warnings (rev 64993) 1511 673 1512 06-11-2012 G.Cosmo tag emdna-V09 674 06-11-2012 G.Cosmo tag emdna-V09-05-34 1513 Minor fixes for porting on AIX; m 675 Minor fixes for porting on AIX; mainly on use of const signature 1514 for objects in maps... 676 for objects in maps... 1515 677 1516 04-11-2012 M.K. tag emdna-V09-05-33 678 04-11-2012 M.K. tag emdna-V09-05-33 1517 G4IT : transform G4ITTrackingInfo 679 G4IT : transform G4ITTrackingInformation pointer to object (rev 64715) 1518 G4ITTrackingManager : get rid of 680 G4ITTrackingManager : get rid of attribute "fVerboseLevel" (rev 64716) 1519 G4ITStepProcessor.cc : correct co 681 G4ITStepProcessor.cc : correct coverity warnings in copy constructor (not used) (rev 64717) 1520 G4ITTransportationManager.hh : pu 682 G4ITTransportationManager.hh : put default constructor as private (rev 64718) 1521 G4VITModel.cc : rename variables 683 G4VITModel.cc : rename variables in copy constructor and assignment operator (------) 1522 G4MolecularDecayChannel.cc : adap 684 G4MolecularDecayChannel.cc : adapt copy constructor to avoid coverity warnings (rev 64719) 1523 G4MoleculeCounter.cc : get rid of 685 G4MoleculeCounter.cc : get rid of duplicated layout (------) 1524 G4DNAMolecularStepByStepModel : a 686 G4DNAMolecularStepByStepModel : add an exception in the assignment operator (rev 64720) 1525 G4ITTrackingManager.hh : remove r 687 G4ITTrackingManager.hh : remove remainders of fVerboseLevel (rev 64722) 1526 Ionisation Models (Born, Rudd, Ru 688 Ionisation Models (Born, Rudd, RuddExtended) : 1527 set fAtomDeexcitation = 0 (re 689 set fAtomDeexcitation = 0 (rev 64723) 1528 add "else" before "if" statem 690 add "else" before "if" statements and 1529 add variables to avoid ma 691 add variables to avoid many checks on particleDefinition. (rev 64724) 1530 dna.files : update files (rev 647 692 dna.files : update files (rev 64725) 1531 693 1532 03-11-2012 S.I. tag emdna-V09-05-32 694 03-11-2012 S.I. tag emdna-V09-05-32 1533 Switched to usage of SetEmModel a 695 Switched to usage of SetEmModel and EmModel in all dna/processes 1534 classes 696 classes 1535 697 1536 24-10-2012 M.K tag emdna-V09 698 24-10-2012 M.K tag emdna-V09-05-31 1537 G4ITNavigator is updated to new i 699 G4ITNavigator is updated to new interface of ReplicaNavigation::ComputeStep 1538 (previously commented) 700 (previously commented) 1539 701 1540 23-10-2012 M.K tag emdna-V09 702 23-10-2012 M.K tag emdna-V09-05-30 1541 Add exception in G4DNASecondOrder 703 Add exception in G4DNASecondOrderReaction 1542 Add carriage return in G4DNASmolu 704 Add carriage return in G4DNASmoluchowskiReaction cc and hh 1543 705 1544 18-10-2012 M.K tag emdna-V09 706 18-10-2012 M.K tag emdna-V09-05-29 1545 Previous tag did not include hist 707 Previous tag did not include history changes 1546 708 1547 18-10-2012 M.K tag emdna-V09 709 18-10-2012 M.K tag emdna-V09-05-28 1548 Remove warning 710 Remove warning 1549 711 1550 17-10-2012 M.K tag emdna-V09 712 17-10-2012 M.K tag emdna-V09-05-27 1551 Correct a typo from previous tag 713 Correct a typo from previous tag 1552 714 1553 17-10-2012 M.K tag emdna-V09 715 17-10-2012 M.K tag emdna-V09-05-26 1554 Correct information in headers 716 Correct information in headers 1555 Rename G4DNADiffustionControlledM 717 Rename G4DNADiffustionControlledModel to G4DNASmoluchowskiReactionModel 1556 G4ITNavigator updated to new inte 718 G4ITNavigator updated to new interface of ReplicaNavigation::ComputeStep. 1557 719 1558 01-10-2012 SI, P.Pater tag emdna-V09 720 01-10-2012 SI, P.Pater tag emdna-V09-05-25 1559 Force kinetic energy to zero for 721 Force kinetic energy to zero for real killings in models. 1560 722 1561 12-07-2012 G.Cosmo tag emdna-V09 723 12-07-2012 G.Cosmo tag emdna-V09-05-24 1562 Explicitly use inclusion of heade 724 Explicitly use inclusion of headers for system of units and physical 1563 constants, in plan to remove impl 725 constants, in plan to remove implicit inclusion from globals.hh. 1564 726 1565 11.07.2012 M.K tag emdna-V09 727 11.07.2012 M.K tag emdna-V09-05-23 1566 Correct warnings introduce in previous 728 Correct warnings introduce in previous tag 1567 729 1568 11.07.2012 M.K tag emdna-V09 730 11.07.2012 M.K tag emdna-V09-05-22 1569 Tag to be proposed 731 Tag to be proposed 1570 732 1571 25.06.2012 M.K tag emdna-V09-05-21 733 25.06.2012 M.K tag emdna-V09-05-21 1572 Fix semantic warning related to f 734 Fix semantic warning related to forward declaration of G4ITNavigator_Lock 1573 Modify molecule's name 735 Modify molecule's name 1574 << 736 1575 21.06.2012 S.I tag emdna-V09-05-20 737 21.06.2012 S.I tag emdna-V09-05-20 1576 Update of electron elastic scatte << 738 Update of electron elastic scattering low limit 1577 739 1578 09.06.2012 M.K tag emdna-V09-05-19 740 09.06.2012 M.K tag emdna-V09-05-19 1579 Fixed shadowing 741 Fixed shadowing 1580 742 1581 04.06.2012 M.K tag emdna-V09-05-18 743 04.06.2012 M.K tag emdna-V09-05-18 1582 Add G4ITTrackingInteractivity + c 744 Add G4ITTrackingInteractivity + correct coverity warnings 1583 745 1584 24.05.2012 M.K tag emdna-V09-05-17 746 24.05.2012 M.K tag emdna-V09-05-17 1585 Remove unnecessary call of pow in 747 Remove unnecessary call of pow in G4DNASecondOrderReaction 1586 748 1587 23.05.2012 M.K tag emdna-V09-05-16 749 23.05.2012 M.K tag emdna-V09-05-16 1588 Add initialisation of G4ITTrackHo 750 Add initialisation of G4ITTrackHolder in copy constructor of 1589 G4ITStepManager 751 G4ITStepManager 1590 Prevent call of destructor of G4I 752 Prevent call of destructor of G4ITStepManager and 1591 G4DNAChemistryManager 753 G4DNAChemistryManager 1592 754 1593 23.05.2012 M.K tag emdna-V09-05-15 755 23.05.2012 M.K tag emdna-V09-05-15 1594 Display warning (only once) from 756 Display warning (only once) from G4DNAMolecularMaterial 1595 when one of its methods is called 757 when one of its methods is called using a material that is 1596 not defined as a molecule 758 not defined as a molecule 1597 759 1598 21.05.2012 M.K tag emdna-V09-05-14 760 21.05.2012 M.K tag emdna-V09-05-14 1599 Modify G4DNAMolecularMaterial 761 Modify G4DNAMolecularMaterial 1600 Modify G4DNADamages 762 Modify G4DNADamages 1601 Add G4DNASecondOrderReaction prot 763 Add G4DNASecondOrderReaction prototype 1602 Modify all models to use G4DNAMol 764 Modify all models to use G4DNAMolecularMaterial 1603 765 1604 14.05.2012 M.K tag emdna-V09-05-13 766 14.05.2012 M.K tag emdna-V09-05-13 1605 Add G4DNAMolecularMaterial 767 Add G4DNAMolecularMaterial 1606 Add G4DNADamages 768 Add G4DNADamages 1607 769 1608 10.05.2012 M.K tag emdna-V09-05-12 770 10.05.2012 M.K tag emdna-V09-05-12 1609 Add the possibility of calling G4 771 Add the possibility of calling G4ITStepManager::EndTracking() 1610 from UserReactionAction::EndProce 772 from UserReactionAction::EndProcessing() 1611 773 1612 08.05.2012 M.K tag emdna-V09-05-11 774 08.05.2012 M.K tag emdna-V09-05-11 1613 Use inverseErf from CLHEP 775 Use inverseErf from CLHEP 1614 776 1615 03.05.2012 M.K tag emdna-V09-05-10 777 03.05.2012 M.K tag emdna-V09-05-10 1616 Add erfc function for windows com 778 Add erfc function for windows compilator (VC++) 1617 779 1618 03.05.2012 M.K tag emdna-V09-05-09 780 03.05.2012 M.K tag emdna-V09-05-09 1619 Add an exception in molecular dec 781 Add an exception in molecular decay, in case no decay channel was proposed in input 1620 782 1621 03.05.2012 M.K tag emdna-V09-05-08 783 03.05.2012 M.K tag emdna-V09-05-08 1622 Add products of dissociative atta 784 Add products of dissociative attachments (as a molecular decay) 1623 Add new methods in G4ChemistryMan 785 Add new methods in G4ChemistryManager : 1624 - PushMolecule 786 - PushMolecule 1625 - PushMoleculeAtParentTimeAndPlac 787 - PushMoleculeAtParentTimeAndPlace 1626 Reset() at the end of G4ITStepMan 788 Reset() at the end of G4ITStepManager::Process() 1627 789 1628 30.03.2012 M.K tag emdna-V09-05-07 790 30.03.2012 M.K tag emdna-V09-05-07 1629 Same as emdna-V09-05-06 791 Same as emdna-V09-05-06 1630 792 1631 30.03.2012 M.K tag emdna-V09-05-06 793 30.03.2012 M.K tag emdna-V09-05-06 1632 1) Add separate navigator for syn 794 1) Add separate navigator for synchronous tracking 1633 New classes : 795 New classes : 1634 * G4ITTransportationManager 796 * G4ITTransportationManager 1635 * G4ITNavigator (just a small cha 797 * G4ITNavigator (just a small change from G4Navigator) 1636 2) A messenger for G4ITStepManage 798 2) A messenger for G4ITStepManager : 1637 * G4ITSteppingMessenger 799 * G4ITSteppingMessenger 1638 3) Solve bugs with normal and bro 800 3) Solve bugs with normal and brownian ITTransportation 1639 801 1640 14.03.2012 M.K tag emdna-V09-05-05 802 14.03.2012 M.K tag emdna-V09-05-05 1641 * int G4VITProcess::fProcessID 803 * int G4VITProcess::fProcessID 1642 int G4VITProcess::fNbProcess 804 int G4VITProcess::fNbProcess 1643 -> become size_t + related change 805 -> become size_t + related changes 1644 * when a poststep process propo 806 * when a poststep process proposes an IL < 0 1645 => considered as a time, and tran 807 => considered as a time, and transportation::computestep 1646 is used 808 is used 1647 809 1648 14.03.2012 M.K tag emdna-V09-05-04 810 14.03.2012 M.K tag emdna-V09-05-04 1649 Fix compilation warning 811 Fix compilation warning 1650 812 1651 14.03.2012 M.K tag emdna-V09-05-03 813 14.03.2012 M.K tag emdna-V09-05-03 1652 Improve the management of information i 814 Improve the management of information in G4ITStepProcessor 1653 Fix coverity warnings 815 Fix coverity warnings 1654 816 1655 18.01.2012 S.I. tag emdna-V09 817 18.01.2012 S.I. tag emdna-V09-05-02 1656 Removal of G4Water* classes in ut 818 Removal of G4Water* classes in utils 1657 819 1658 11.01.2012 M.K tag emdna-V09 820 11.01.2012 M.K tag emdna-V09-05-01 1659 Bug fix in G4DNAChemistryManager: 821 Bug fix in G4DNAChemistryManager::CreateSolvatedElectron 1660 concerning the final position of 822 concerning the final position of the solvated electron 1661 using Sanche thermalization 823 using Sanche thermalization 1662 824 1663 16.12.2011 S.I tag emdna-V09 825 16.12.2011 S.I tag emdna-V09-05-00 1664 Updated source of cross section f 826 Updated source of cross section file for elastic scattering 1665 827 1666 25.11.2011 M.K tag emdna-V09 828 25.11.2011 M.K tag emdna-V09-04-52 1667 Correct a typo in previous tag 829 Correct a typo in previous tag 1668 830 1669 25.11.2011 M.K tag emdna-V09 831 25.11.2011 M.K tag emdna-V09-04-51 1670 Place the reaction products at th 832 Place the reaction products at the reaction site 1671 rather than center of mass in DNA 833 rather than center of mass in DNAMolecularReaction 1672 834 1673 21.11.2011 M.K tag emdna-V09 835 21.11.2011 M.K tag emdna-V09-04-50 1674 Change the name of macros in AddC 836 Change the name of macros in AddClone_def.hh to 1675 avoid conflicts with ROOT. 837 avoid conflicts with ROOT. 1676 Add short class description (comm 838 Add short class description (comments added in the new files) 1677 in JavaDoc style for doxygen use. 839 in JavaDoc style for doxygen use. 1678 840 1679 21.11.2011 M.K tag emdna-V09 841 21.11.2011 M.K tag emdna-V09-04-49 1680 Correct a wrong condition in the 842 Correct a wrong condition in the step manager 1681 Avoid the call of Green brownian 843 Avoid the call of Green brownian bridge when 1682 the time step is equal to zero (b 844 the time step is equal to zero (bug) 1683 Give priority to G4Processes over 845 Give priority to G4Processes over reaction processes 1684 when the time steps returned by t 846 when the time steps returned by the time stepper 1685 and the processes are equal 847 and the processes are equal 1686 Improve verbose 848 Improve verbose 1687 849 1688 21.11.2011 M.K tag emdna-V09 850 21.11.2011 M.K tag emdna-V09-04-48 1689 Fix incoherent management of time 851 Fix incoherent management of time and secondaries in management/ 1690 Avoid memory leak related to the 852 Avoid memory leak related to the management of ITs 1691 Correct verbose in new models & p 853 Correct verbose in new models & process 1692 854 1693 18.11.2011 M.K tag emdna-V09 855 18.11.2011 M.K tag emdna-V09-04-47 1694 Fix uninitialized boolean variabl << 856 Fix uninitialized boolean variable (fWriteFile) 1695 in G4DNAChemistryManager 857 in G4DNAChemistryManager 1696 858 1697 18.11.2011 M.K tag emdna-V09 859 18.11.2011 M.K tag emdna-V09-04-46 1698 Fix compilation error in G4TrackL 860 Fix compilation error in G4TrackList on macOs 1699 Clean G4DNAMolecularDecayDisplace 861 Clean G4DNAMolecularDecayDisplacer from comments 1700 Correct a typo in G4DNAChemistryM 862 Correct a typo in G4DNAChemistryManager (H20 -> H2O) 1701 863 1702 15.11.2011 G.Cosmo tag emdna-V09 864 15.11.2011 G.Cosmo tag emdna-V09-04-45 1703 Fixes to initialisation of static 865 Fixes to initialisation of static data in G4VMolecularDecayDisplacer 1704 and G4DNAMolecularDecayDisplacer, 866 and G4DNAMolecularDecayDisplacer, to allow generation of DLLs on 1705 Windows. 867 Windows. 1706 Fixed compilation warning on icc 868 Fixed compilation warning on icc compiler in 1707 G4MolecularDecayTable.cc 869 G4MolecularDecayTable.cc 1708 870 1709 10.11.2011 M.K. tag emdna-V09 871 10.11.2011 M.K. tag emdna-V09-04-44 1710 Fix a bug in G4DNATransformElectr 872 Fix a bug in G4DNATransformElectronModel 1711 873 1712 10.11.2011 M.K. tag emdna-V09 874 10.11.2011 M.K. tag emdna-V09-04-43 1713 Clean classes for release 875 Clean classes for release 1714 Add comment into source 876 Add comment into source 1715 Change name of some methods 877 Change name of some methods 1716 Transform two independent singlet 878 Transform two independent singleton pointers to auto_ptr 1717 in order to prevent the user from 879 in order to prevent the user from deleting those classes 1718 (ITStepMan + DNAChemMan) 880 (ITStepMan + DNAChemMan) 1719 881 1720 10.11.2011 M.K. tag emdna-V09 882 10.11.2011 M.K. tag emdna-V09-04-42 1721 For safety (at the time of static 883 For safety (at the time of static members destruction) 1722 change fgManager in MolConf into 884 change fgManager in MolConf into a pointer delete by 1723 the chemistryManager. 885 the chemistryManager. 1724 886 1725 09.11.2011 M.K. tag emdna-V09 887 09.11.2011 M.K. tag emdna-V09-04-41 1726 Add friend class G4TrackList_Boun 888 Add friend class G4TrackList_Boundary; 1727 in G4TrackListNode. 889 in G4TrackListNode. 1728 Simplify and improve the use of d 890 Simplify and improve the use of dnaChemMan 1729 Add more convenient methods in us 891 Add more convenient methods in userReactionAction 1730 892 1731 08.11.2011 M.K. tag emdna-V09 893 08.11.2011 M.K. tag emdna-V09-04-40 1732 Fix coverity warnings 894 Fix coverity warnings 1733 895 1734 07.11.2011 M.K. tag emdna-V09 896 07.11.2011 M.K. tag emdna-V09-04-39 1735 Add correct types/sub-types for D 897 Add correct types/sub-types for DNAElectronSolvatation 1736 DNAMolecularDecay, DNABrownianTra 898 DNAMolecularDecay, DNABrownianTransportation, ITTransp 1737 Add the possibility to link a dec 899 Add the possibility to link a decay time to a given 1738 electronic configuration while de 900 electronic configuration while declaring the decay 1739 scheme through : G4MoleculeDef::A 901 scheme through : G4MoleculeDef::AddeConfToExcitedState 1740 Clean classes for release 902 Clean classes for release 1741 903 1742 03.11.2011 M.K. tag emdna-V09 904 03.11.2011 M.K. tag emdna-V09-04-38 1743 Add dna libs in sources.cmake 905 Add dna libs in sources.cmake 1744 906 1745 03.11.2011 M.K. tag emdna-V09 907 03.11.2011 M.K. tag emdna-V09-04-37 1746 Add G4ITStepManager fVerbose 908 Add G4ITStepManager fVerbose 1747 Add dna includes in sources.cmake 909 Add dna includes in sources.cmake 1748 << 910 1749 01.11.2011 M.K. tag emdna-V09 911 01.11.2011 M.K. tag emdna-V09-04-36 1750 Remove warnings on G4ITModelProce 912 Remove warnings on G4ITModelProcessor, 1751 G4ITTransportation, G4TrackList o 913 G4ITTransportation, G4TrackList on Windows 1752 914 1753 01.11.2011 G.Cosmo 915 01.11.2011 G.Cosmo 1754 Renamed export flags for DLL buil 916 Renamed export flags for DLL builds to G4EM_ALLOC_EXPORT and 1755 updated GNUMakefiles to have it p 917 updated GNUMakefiles to have it properly defined. 1756 918 1757 31.10.2011 M.K tag emdna-V09-04-35 919 31.10.2011 M.K tag emdna-V09-04-35 1758 Remove obsolete G4Exception 920 Remove obsolete G4Exception 1759 Remove "friend class G4KDTree" in G4KDN 921 Remove "friend class G4KDTree" in G4KDNode 1760 Remove G4VITProcessor and all relatives << 922 Remove G4VITProcessor and all relatives 1761 Fix windows compilation errors & warnin 923 Fix windows compilation errors & warnings 1762 924 1763 28.10.2011 M.K tag emdna-V09-04-34 925 28.10.2011 M.K tag emdna-V09-04-34 1764 Remove __PRETTY_FUNCTION__ introd 926 Remove __PRETTY_FUNCTION__ introduce __Exception_Origin__ 1765 Plus remove obsolete G4Exception 927 Plus remove obsolete G4Exception 1766 928 1767 28.10.2011 M.K tag emdna-V09-04-33 929 28.10.2011 M.K tag emdna-V09-04-33 1768 Displace G4DNAChemistryManager, G 930 Displace G4DNAChemistryManager, G4DNAMolecularReactionTable, 1769 G4VDNAReactionModel to utils 931 G4VDNAReactionModel to utils 1770 Displace G4DNAMoleculeEncouterSte 932 Displace G4DNAMoleculeEncouterStepper, G4DNAMoleculeReaction 1771 to models 933 to models 1772 934 1773 27.10.2011 M.K tag emdna-V09-04-32 935 27.10.2011 M.K tag emdna-V09-04-32 1774 Fix BornIonisation + the two RuddIoni 936 Fix BornIonisation + the two RuddIoni 1775 coverity errors. 937 coverity errors. 1776 938 1777 26.10.2011 M.K tag emdna-V09-04-31 939 26.10.2011 M.K tag emdna-V09-04-31 1778 change std::shared_ptr to CLHEP::shared << 940 change std::shared_ptr to CLHEP::shared_ptr 1779 941 1780 26.10.2011 M.K. tag emdna-V09-04-30 942 26.10.2011 M.K. tag emdna-V09-04-30 1781 Memory leak fixes 943 Memory leak fixes 1782 G4MolecularConfiguration::fManager adde 944 G4MolecularConfiguration::fManager added 1783 945 1784 26.10.2011 M.K. tag emdna-V09-04-29 946 26.10.2011 M.K. tag emdna-V09-04-29 1785 G4DNAIonisation : add models for C/N/O/ 947 G4DNAIonisation : add models for C/N/O/Fe 1786 Add electron solvatation process & mode 948 Add electron solvatation process & models 1787 Add chemical processes 949 Add chemical processes 1788 950 1789 21.10.2011 M.K. tag emdna-V09-04-28 951 21.10.2011 M.K. tag emdna-V09-04-28 1790 Same as emdna-V09-04-27 including model << 952 Same as emdna-V09-04-27 including models/ & processes/ from 1791 emdna-V09-04-24 953 emdna-V09-04-24 1792 << 954 1793 21.10.2011 M.K. tag emdna-V09-04-27 955 21.10.2011 M.K. tag emdna-V09-04-27 1794 CMake fixes from emdna-V09-04-24 956 CMake fixes from emdna-V09-04-24 1795 << 957 1796 21.10.2011 M.K. tag emdna-V09-04-26 958 21.10.2011 M.K. tag emdna-V09-04-26 1797 Bug fixes and new dev from the previous << 959 Bug fixes and new dev from the previous tag 1798 960 1799 21.10.2011 S. Incerti tag emdna-V09-04-25 961 21.10.2011 S. Incerti tag emdna-V09-04-25 1800 Extension of ionisation by HZE proposed 962 Extension of ionisation by HZE proposed by Z. Francis 1801 963 1802 20.10.2011 M.K. tag emdna-V09-04-24 964 20.10.2011 M.K. tag emdna-V09-04-24 1803 Bug fixes and new dev from the previous 965 Bug fixes and new dev from the previous tag 1804 << 966 1805 07.10.2011 M.K. tag emdna-V09-04-23 967 07.10.2011 M.K. tag emdna-V09-04-23 1806 First tag with "molecules" files << 968 First tag with "molecules" files 1807 << 969 1808 07.10.2011 M.K. tag emdna-V09-04-22 970 07.10.2011 M.K. tag emdna-V09-04-22 1809 Add molecules+management directory 971 Add molecules+management directory 1810 First tag with "management" files 972 First tag with "management" files 1811 973 1812 09.09.2011 G.Folger tag emdna-V09 974 09.09.2011 G.Folger tag emdna-V09-04-21 1813 utils/sources.cmake: remove refer << 975 utils/sources.cmake: remove reference to non-existant 1814 G4DNAMoleculeManager.cc << 976 G4DNAMoleculeManager.cc 1815 977 1816 05.09.2011 A. M. M. K., S. I., tag emdna-V09 978 05.09.2011 A. M. M. K., S. I., tag emdna-V09-04-20 1817 Updated sources.make and CMakeLis 979 Updated sources.make and CMakeLists.txt 1818 980 1819 30.08.2011 A. M. M. K., S. I., tag emdna-V09 981 30.08.2011 A. M. M. K., S. I., tag emdna-V09-04-19 1820 Reorganized whole architecture. 982 Reorganized whole architecture. 1821 983 1822 24.08.2011 A. Mantero, tag emdna-V09-04-18 984 24.08.2011 A. Mantero, tag emdna-V09-04-18 1823 Fixed a bug regarding energy depo 985 Fixed a bug regarding energy deposition (bindingEnergy=0 1824 if no deexcitation) 986 if no deexcitation) 1825 987 1826 22.08.2011 S. Incerti, tag emdna-V09-04-17 988 22.08.2011 S. Incerti, tag emdna-V09-04-17 1827 Changed code (em0006) numbering f 989 Changed code (em0006) numbering for G4Exception 1828 990 1829 19.08.2011 S. Incerti, tag emdna-V09-04-16 991 19.08.2011 S. Incerti, tag emdna-V09-04-16 1830 Switched to new G4Exception synta 992 Switched to new G4Exception syntax 1831 993 1832 04.08.2011 A. Mantero, tag emdna-V09-04-15 994 04.08.2011 A. Mantero, tag emdna-V09-04-15 1833 Added enhanced debug information 995 Added enhanced debug information in ionisation models 1834 996 1835 02.08.2011 S. Incerti, tag emdna-V09-04-14 997 02.08.2011 S. Incerti, tag emdna-V09-04-14 1836 Removed wrong pointer delete in G4DNARu 998 Removed wrong pointer delete in G4DNARuddIonisation* 1837 999 1838 28.07.2011 S. Incerti, tag emdna-V09-04-13 1000 28.07.2011 S. Incerti, tag emdna-V09-04-13 1839 Removed obsolete information. 1001 Removed obsolete information. 1840 1002 1841 28.07.2011 S. Incerti, tag emdna-V09-04-12 1003 28.07.2011 S. Incerti, tag emdna-V09-04-12 1842 Updated deexcitation initialization in 1004 Updated deexcitation initialization in ionization models. 1843 1005 1844 21.07.2011 A. Mantero, tag emdna-V09-04-11 1006 21.07.2011 A. Mantero, tag emdna-V09-04-11 1845 Coverity warnings removal 1007 Coverity warnings removal 1846 1008 1847 11.07.2011 S.Incerti, tag emdna-V09-04-10 1009 11.07.2011 S.Incerti, tag emdna-V09-04-10 1848 - Increased energy limits for 1010 - Increased energy limits for 1849 G4DNAChargeIncrease 1011 G4DNAChargeIncrease 1850 G4DNAChargeDecrease 1012 G4DNAChargeDecrease 1851 G4DNADingfelderChargeIncreaseModel 1013 G4DNADingfelderChargeIncreaseModel 1852 G4DNADingflederChargeDecreaseModel 1014 G4DNADingflederChargeDecreaseModel 1853 in collaboration with Ziad F. 1015 in collaboration with Ziad F. 1854 - This tag includes Alfonso's upgrade << 1016 - This tag includes Alfonso's upgrade 1855 of ionisation classes for Auger e- 1017 of ionisation classes for Auger e- 1856 1018 1857 16.05.2011 A.Mantero, tag emdna-V09-04-09 1019 16.05.2011 A.Mantero, tag emdna-V09-04-09 1858 Further compilation warnings removal 1020 Further compilation warnings removal 1859 1021 1860 16.05.2011 A.Mantero, tag emdna-V09-04-08 1022 16.05.2011 A.Mantero, tag emdna-V09-04-08 1861 Compilation warnings removal 1023 Compilation warnings removal 1862 1024 1863 12.05.2011 A.Mantero, tag emdna-V09-04-07 1025 12.05.2011 A.Mantero, tag emdna-V09-04-07 1864 added Atomic Deexcitation to Ionisation 1026 added Atomic Deexcitation to Ionisation Models 1865 1027 1866 04.05.2011 S. Incerti, tag emdna-V09-04-06 1028 04.05.2011 S. Incerti, tag emdna-V09-04-06 1867 Fixed compilation error on icc in 1029 Fixed compilation error on icc in 1868 G4DNADingfelderChargeIncreaseModel.cc. 1030 G4DNADingfelderChargeIncreaseModel.cc. 1869 1031 1870 03.05.2011 S. Incerti, tag emdna-V09-04-05 1032 03.05.2011 S. Incerti, tag emdna-V09-04-05 1871 Changed process sub-type numberin 1033 Changed process sub-type numbering. 1872 1034 1873 30.04.2011 S. Incerti, tag emdna-V09-04-04 1035 30.04.2011 S. Incerti, tag emdna-V09-04-04 1874 Fixed coverity warnings. 1036 Fixed coverity warnings. 1875 1037 1876 05.04.2011 S. Incerti, tag emdna-V09-04-03 1038 05.04.2011 S. Incerti, tag emdna-V09-04-03 1877 Updated all models for handling o 1039 Updated all models for handling of variable density. 1878 1040 1879 17.03.2011 S. Incerti, tag emdna-V09-04-02 1041 17.03.2011 S. Incerti, tag emdna-V09-04-02 1880 Addition of dependencies to confi 1042 Addition of dependencies to configuration files. 1881 1043 1882 17.03.2011 S. Incerti, tag emdna-V09-04-01 1044 17.03.2011 S. Incerti, tag emdna-V09-04-01 1883 Addition of all files. 1045 Addition of all files. 1884 1046 1885 13.02.2011 S. Incerti, tag emdna-V09-04-00 1047 13.02.2011 S. Incerti, tag emdna-V09-04-00 1886 Creation of dna sub-package in el 1048 Creation of dna sub-package in electromagnetic category.