| Geant4 Cross Reference |
1 # Category emdna History << 1 =========================================================
2 << 2 Geant4 - an Object-Oriented Toolkit for Simulation in HEP
3 See `CONTRIBUTING.rst` for details of **requir << 3 =========================================================
4 which **must** added in reverse chronological << 4
5 It must **not** be used as a substitute for wr << 5 Category History file
6 << 6 ---------------------
7 ---------------------------------------------- << 7 This file should be used by G4 developers and category coordinators
8 << 8 to briefly summarize all major modifications introduced in the code
9 ## 2024-10-31 Hoang Tran (emdna-V11-02-17) << 9 and keep track of all category-tags.
10 - missing value in DNA PTB Ionization Structur << 10 It DOES NOT substitute the CVS log-message one should put at every
11 - missing GetMaterial() in DNA PTB Excitation << 11 committal in the CVS repository !
12 << 12
13 ## 2024-10-02 Hoang Tran (emdna-V11-02-16) << 13 ----------------------------------------------------------
14 - Modified the molecule names of OH, HO2, O in << 14 * Reverse chronological order (last date on top), please *
15 Each molecule configuration has a molecule d << 15 ----------------------------------------------------------*
16 <<
17 ## 2024-08-27 Gabriele Cosmo (emdna-V11-02-15) <<
18 - Fixed reported Coverity defects for use of s <<
19 and const iterators. <<
20 <<
21 ## 2024-08-20 Hoang Tran (emdna-V11-02-14) <<
22 - debug invalid a root node of KDTree <<
23 <<
24 ## 2024-08-08 Gabriele Cosmo (emdna-V11-02-13) <<
25 - Fixed reported Coverity defects in G4LEPTSEl <<
26 for explicit null dereferenced pointer and o <<
27 cleanup. <<
28 <<
29 ## 2024-05-23 Hoang Tran (emdna-V11-02-12) <<
30 - Delete enum unused due to te use of EmParame <<
31 to control chemistry models in G4EmDNAChemis <<
32 <<
33 ## 2024-05-11 Gabriele Cosmo (emdna-V11-02-11) <<
34 - Fixed compilation error on macOS/clang with <<
35 of std::function in G4OctreeFinder. <<
36 <<
37 ## 2024-05-06 Gabriele Cosmo (emdna-V11-02-10) <<
38 - Fixed compilation warning on macOS/XCode for <<
39 in G4DNADoubleIonisationModel and G4DNAMulti <<
40 <<
41 ## 2024-04-25 Hoang Tran (emdna-V11-02-09) <<
42 - Delete DelayLists at the end of chemistry st <<
43 - clean the G4Scheduler <<
44 <<
45 ## 2024-04-24 W.G.Shin (emdna-V11-02-08) <<
46 - G4DNAELSEPAElasticModel <<
47 - Modified to be compatible with density sca <<
48 <<
49 ## 2024-04-19 Gabriele Cosmo (emdna-V11-02-07) <<
50 - Fixed compilation error on Windows VC++ with <<
51 Added missing declarations for TG4MoleculeSh <<
52 Based on [GitHub PR#69](https://github.com/G <<
53 <<
54 ## 2024-04-18 Hoang Tran (emdna-V11-02-06) <<
55 - debug invalid KDTree node. <<
56 <<
57 ## 2024-04-15 Vladimir Ivanchenko (emdna-V11-0 <<
58 - G4GeneralIonIonisationModel, G4DNAIonChargeI <<
59 G4DNAIonChargeDecreaseModel - new classes im <<
60 ions heavier than Helium <<
61 - G4DNAChargeDecrease, G4DNAChargeIncrease - r <<
62 min/max model energy inside processes clas <<
63 - G4DNARuddIonisationExtendedModel - updated i <<
64 from the general model <<
65 - source.cmake in models sub-directory become <<
66 both .hh and .cc files <<
67 <<
68 ## 2024-04-10 Shogo Okada (emdna-V11-02-04) <<
69 - G4DNAElectronHoleRecombination <<
70 - Changed the branch condition in FindReacta <<
71 involved in electron-hole recombination <<
72 - G4DNAWaterDissociationDisplacer <<
73 - Added dissociative decay channels for mult <<
74 - G4DNAMultipleIonisationManager <<
75 - New class focusing on generation of multip <<
76 calculation of scale parameter to compute <<
77 multiple-ionization process <<
78 - G4DNADoubleIonisation <<
79 - G4DNATripleIonisation <<
80 - G4DNAQuadrupleIonisation <<
81 - New process classes for multiple-ionizatio <<
82 - G4DNADoubleIonisationModel <<
83 - G4DNATripleIonisationModel <<
84 - G4DNAQuadrupleIonisationModel <<
85 - New model classes related to multiple-ioni <<
86 <<
87 ## 2024-04-05 Vladimir Ivanchenko (emdna-V11-0 <<
88 - G4DNARuddIonisationExtendedModel - updated m <<
89 uppload data in the class constructor once <<
90 effective charge approach for all ions wit <<
91 correct computation of stopping power and <<
92 variables before sampling, optimized algor <<
93 becomes ~10 times faster), removed unused <<
94 <<
95 ## 2024-02-29 Hoang Tran (emdna-V11-02-02) <<
96 - correct verbose conditions for warning in IR <<
97 <<
98 ## 2024-02-24 Hoang Tran (emdna-V11-02-01) <<
99 - Optimize IRT-syn at 1 ps for high LET applic <<
100 <<
101 ## 2023-12-15 Vladimir Ivanchenko (emdna-V11-0 <<
102 - G4DNABornAngle - fixed numerical problem: ad <<
103 use relativistic formula for max energy tr <<
104 <<
105 ## 2023-11-14 Ben Morgan (emdna-V11-01-25) <<
106 - Use G4FindDataDir to access data libraries i <<
107 <<
108 ## 2023-11-11 Hoang Tran (emdna-V11-01-24) <<
109 - correct fastercode section for dna opt6 <<
110 <<
111 ## 2023-10-12 Hoang Tran (emdna-V11-01-23) <<
112 - correct scavenger counter for oxygen <<
113 <<
114 ## 2023-10-11 Hoang Tran (emdna-V11-01-22) <<
115 - Fixed the K shell bug in G4DNARuddIonisation <<
116 <<
117 ## 2023-10-10 Hoang Tran (emdna-V11-01-21) <<
118 - improved equilibrium processes, introduced G <<
119 <<
120 ## 2023-09-04 Gabriele Cosmo (emdna-V11-01-20) <<
121 - In navigation classes, removed references to <<
122 which is now deprecated. <<
123 <<
124 ## 2023-08-31 Gabriele Cosmo (emdna-V11-01-19) <<
125 - Removed references to unused G4GRSSolid and <<
126 <<
127 ## 2023-08-29 (emdna-V11-01-18) <<
128 - Fix minor/obvious Coverity issues <<
129 <<
130 ## 2023-07-21 Ben Morgan (emdna-V11-01-17) <<
131 - Apply core clang-tidy fixes plus those for <<
132 - Cons/destructor modernization <<
133 - Readability and logic for conditionals/boo <<
134 <<
135 ## 2023-07-12 Ben Morgan (emdna-V11-01-16) <<
136 - Apply patch from [GitHub PR 58](https://gith <<
137 - Use std::erfc to avoid precision loss <<
138 - Remove unused header <<
139 <<
140 ## 2023-06-10 Hoang Tran (emdna-V11-01-15) <<
141 - minor correction for DNA material in option6 <<
142 <<
143 ## 2023-06-09 Hoang Tran (emdna-V11-01-14) <<
144 - use analytical method for DNA material in op <<
145 <<
146 ## 2023-06-03 Vladimir Ivanchenko (emdna-V11-0 <<
147 - G4DNARuddIonisationExtendedModel - model re- <<
148 threads, applicable for scaled energy interv <<
149 an ion data is not available proton x-sectio <<
150 used, sampling of delta-electron is done usi <<
151 <<
152 ## 2023-05-25 Hoang Tran (emdna-V11-01-12) <<
153 - Modified DNA cross section file name to new <<
154 <<
155 ## 2023-05-19 Hoang Tran (emdna-V11-01-11) <<
156 - Add DNA cross section to dna_option6 <<
157 <<
158 ## 2023-05-17 Hoang Tran (emdna-V11-01-10) <<
159 - Fix Compilation warnings on XCode <<
160 <<
161 ## 2023-05-04 Hoang Tran (emdna-V11-01-09) <<
162 - correct the initial values of G4DNAEventSche <<
163 <<
164 ## 2023-04-28 Hoang Tran (emdna-V11-01-08) <<
165 - add time structure (pulsed beam) to water ra <<
166 <<
167 ## 2023-04-26 Hoang Tran (emdna-V11-01-07) <<
168 - correct KDTree bug <<
169 <<
170 ## 2023-03-24 Hoang Tran (emdna-V11-01-06) <<
171 - icsd physicslist: deleted unused model, <<
172 - Apdated RegisterModel function with new stru <<
173 - added model data to G4DNAMaterialManager sin <<
174 <<
175 ## 2023-03-08 Gabriele Cosmo (emdna-V11-01-05) <<
176 - Fixed compilation warning on macOS/XCode for <<
177 in G4DNAVacuumModel::Initialise(). <<
178 <<
179 ## 2023-02-09 Hoang Tran (emdna-V11-01-04) <<
180 - Introduced G4DNAMaterialManager to manage av <<
181 and keeps DNA cross section data in one thread <<
182 - minor change in G4VDNAModel <<
183 <<
184 ## 2023-01-27 Hoang Tran (emdna-V11-01-03) <<
185 - reorganize multiple material model of PTB mo <<
186 G4VDNAModel plays like a data layer for multip <<
187 The concrete models are independent of G4DNAMo <<
188 <<
189 ## 2023-01-17 Hoang Tran (emdna-V11-01-02) <<
190 - replaced string to material index and clean <<
191 G4DNAPTBIonisationModel, G4DNAPTBElasticModel, <<
192 G4DNAPTBExcitationStructure) - PTB models <<
193 - added material pointer members for each conc <<
194 - removed unused objects (G4DataVector()) <<
195 <<
196 ## 2023-01-06 Hoang Tran (emdna-V11-01-01) <<
197 - clean G4DNAModelInterface file for the model <<
198 <<
199 ## 2022-12-12 Hoang Tran (emdna-V11-01-00) <<
200 - fix coverity of G4DNARuddIonisationExtendedM <<
201 (Uninitialized scalar variable) from cand1 ana <<
202 <<
203 ## 2022-11-24 Vladimir Ivanchenko (emdna-V11-0 <<
204 - G4DNARuddIonisationExtendedModel - fixed com <<
205 radioactive decay module - before this upd <<
206 only 5 ions have data needed for this mode <<
207 model scaling relation to the carbon ion i <<
208 no data; low-energy limit is used now more <<
209 but not killed, because they may have radi <<
210 lines are removed from the class <<
211 <<
212 ## 2022-11-23 Gabriele Cosmo (emdna-V11-00-38) <<
213 - Fixed more compilation warnings for implicit <<
214 <<
215 ## 2022-11-22 Hoang Tran (emdna-V11-00-37) <<
216 - delete unused tests in dna (G4DNAProcessTest <<
217 <<
218 ## 2022-11-18 Gabriele Cosmo (emdna-V11-00-36) <<
219 - Fixed compilation warnings for implicit type <<
220 <<
221 ## 2022-11-08 Vladimir Ivanchenko (emdna-V11-0 <<
222 - G4DNAUeharaScreenedRutherfordElasticModel - <<
223 low and high energy limit for the model; r <<
224 <<
225 ## 2022-11-01 Hoang Tran (emdna-V11-00-34) <<
226 - Fix Coverity issues for ref-09 <<
227 <<
228 ## 2022-10-10 Hoang Tran (emdna-V11-00-33) <<
229 - minor correction of IRT-syn model (chemistry <<
230 after 1 ps. <<
231 <<
232 ## 2022-10-21 Yann Perrot, Le Tuan Anh (emdna- <<
233 - Add nitrogen models from PTra code <<
234 <<
235 ## 2022-10-10 Hoang Tran (emdna-V11-00-31) <<
236 - Fixed minor mistake of file name in G4DNARPW <<
237 - Added protection for HighEnergyLimit/LowEner <<
238 G4DNARPWBAExcitationModel <<
239 <<
240 ## 2022-10-07 Gabriele Cosmo (emdna-V11-00-30) <<
241 - Fixed compilation warnings on Intel/icx comp <<
242 but not used in G4ITNavigator2. <<
243 <<
244 ## 2022-10-05 Hoang Tran (emdna-V11-00-29) <<
245 - Fix user's report for IRT model. <<
246 If the first IRTSampling won't give any rea <<
247 <<
248 ## 2022-10-03 Hoang Tran (emdna-V11-00-28) <<
249 - Fix Coverity static analysis for ref-08 <<
250 uninit_member in G4DNAMillerGreenExcitationMo <<
251 G4DNADingfelderChargeIncreaseModel,G4DNARuddI <<
252 Use auto & instead of auto : G4ITFinder, G4DN <<
253 <<
254 ## 2022-09-08 Hoang Tran (emdna-V11-00-27) <<
255 - Resolve dependency inconsistencies : <<
256 dna/management/include/G4ChemicalMoleculeF <<
257 dna/management/include/G4UserMeshAction.hh <<
258 dna/management/include/G4OctreeFinder.hh i <<
259 <<
260 ## 2022-09-05 Ben Morgan (emdna-V11-00-26) <<
261 - Partially resolve dependency inconsistencies <<
262 - NB: cannot be resolved fully without intro <<
263 G4emdna-man, G4emdna-molman, G4emdna-utils <<
264 <<
265 ## 2022-09-01 Seth R Johnson (emdna-V11-00-25) <<
266 - Define G4CT_MAX_COUNT for changing "compile <<
267 errors on NVHPC compiler. <<
268 <<
269 ## 2022-08-30 Vladimir Ivanchenko (emdna-V11-0 <<
270 - G4DNAExcitation, G4DNAVibExcitation, G4DNARo <<
271 cleanup according to the recent G4VEmProce <<
272 headers are moved to source; C++11 keyward <<
273 <<
274 ## 2022-06-21 Igor Semeniouk (emdna-V11-00-23) <<
275 - G4DNABornIonisationModel1.cc, G4DNACPA100Ela <<
276 G4DNACPA100IonisationModel.cc, G4DNAChampion <<
277 G4DNAELSEPAElasticModel.cc, G4DNAEmfietzoglo <<
278 G4DNAIonElasticModel.cc, G4DNAQuinnPlasmonEx <<
279 G4DNARPWBAIonisationModel.cc, G4DNARelativis <<
280 G4DNASancheExcitationModel.cc : <<
281 use G4FindDataDir("G4LEDATA") to find datase <<
282 <<
283 ## 2022-06-03 Hoang Tran (emdna-V11-00-22) <<
284 - correct DNA ion definitions in G4DNARuddIoni <<
285 <<
286 ## 2022-06-01 Hoang Tran (emdna-V11-00-21) <<
287 - G4Octree : fixed Coverity warning. <<
288 <<
289 ## 2022-05-24 Hoang Tran (emdna-V11-00-20) <<
290 - update data structure to improve performance <<
291 <<
292 ## 2022-05-18 Gabriele Cosmo (emdna-V11-00-19) <<
293 - G4ITTransportation: fixed misuse of bitwise <<
294 <<
295 ## 2022-05-12 Sergio Losilla (emdna-V11-00-18) <<
296 - Added missing headers. <<
297 <<
298 ## 2022-05-11 Hoang Tran (emdna-V11-00-17) <<
299 - change the scavenging filter of the IRT beyo <<
300 <<
301 ## 2022-05-02 Hoang Tran (emdna-V11-00-16) <<
302 - Add localthread for fUse of G4VMoleculeCount <<
303 <<
304 ## 2022-04-27 Miguel A. Cortes-Giraldo and Hoa <<
305 - Incorporation of model based on RPWBA to tra <<
306 - Added G4DNARPWBAExcitationModel, G4DNARPWBAI <<
307 <<
308 ## 2022-04-25 Hoang Tran (emdna-V11-00-14) <<
309 - add UserBrownianAction in G4DNABrownianTrans <<
310 G4DNAMolecularDissociation <<
311 - replace G4int by int64_t for width integer t <<
312 - add fResetScavenger in G4SchedulerMessenger <<
313 <<
314 ## 2022-04-14 Paolo Dondero (emdna-V11-00-13) <<
315 - save local instances for recurrent access to <<
316 G4DNAMillerGreenExcitationModel, G4DNARuddIo <<
317 G4DNARuddIonisationModel <<
318 - use G4Pow and G4Log instead of std::pow and <<
319 - inside G4DNARuddIonisationExtendedModel comm <<
320 inside G4DNAGenericIonsManager <<
321 <<
322 ## 2022-04-14 Hoang Tran (emdna-V11-00-12) <<
323 - Debug the report #2235 which might be relate <<
324 - Clean code <<
325 - Delete G4ITFinder.cc <<
326 <<
327 ## 2022-04-04 Paolo Dondero (emdna-V11-00-11) <<
328 - save local instances for recurrent access to <<
329 G4DNADingfelderChargeDecreaseModel and G4DNADi <<
330 - use G4Pow and G4Log instead of std::pow and <<
331 <<
332 ## 2022-03-18 SI (emdna-V11-00-10) <<
333 - add protection in G4DNACPA100IonisationModel <<
334 <<
335 ## 2022-03-15 Hoang Tran (emdna-V11-00-09) <<
336 - remove macro commands to control the chemist <<
337 (creating models in G4SchedulerMessenger can m <<
338 - add flag OctreeFinder in IRT_syn's Initializ <<
339 <<
340 ## 2022-03-04 Hoang Tran (emdna-V11-00-08) <<
341 - add macro commands to control the chemistry <<
342 parameters including the chemical molecules an <<
343 <<
344 ## 2022-02-18 Hoang Tran (emdna-V11-00-07) <<
345 - optimize IRT-syn model, use reaction radius <<
346 - delete G4VReactionType, G4DNAReactionTypeMan <<
347 G4DNAPartiallyDiffusionControlled <<
348 - delete G4DNAIRT_geomtries <<
349 <<
350 ## 2022-02-17 Jonas Hahnfeld (emdna-V11-00-06) <<
351 - `G4ITTransportation`: Make `PrepareState` mo <<
352 - `G4DNAPolyNucleotideReactionProcess`: <<
353 - Move `PrepareState` and `State` macros int <<
354 - Make `PrepareState` more function-like, ex <<
355 - Move variable `pMoleculeA` under `G4VERBOS <<
356 <<
357 ## 2022-02-10 Hoang Tran (emdna-V11-00-05) <<
358 - add the condition of water material for the <<
359 warning in G4DNAMolecularDissociation::DecayIt <<
360 <<
361 ## 2022-02-3 Hoang Tran (emdna-V11-00-04) <<
362 - modify the macro in G4Molecule.cc and G4ITTy <<
363 <<
364 ## 2022-01-18 Jonas Hahnfeld (emdna-V11-00-03) <<
365 - Prefer pointer to `const G4Material` if poss <<
366 <<
367 ## 2022-01-17 Jonas Hahnfeld (emdna-V11-00-02) <<
368 - Remove useless `const_cast` of `G4VSensitive <<
369 <<
370 ## 2021-12-23 Hoang Tran (emdna-V11-00-01) <<
371 - add G4DNAPolyNucleotideReactionProcess, G4VD <<
372 files for DNA damage applications <<
373 <<
374 ## 2021-12-10 Ben Morgan (emdna-V11-00-00) <<
375 - Change to new Markdown History format <<
376 <<
377 --- <<
378 <<
379 # History entries prior to 11.0 <<
380 <<
381 8-11-2021, H. Tran, emdna-V10-07-15 <<
382 - corrected Circular dependencies for mesoscop <<
383 - corrected the problem in IRT <<
384 <<
385 4-11-2021, H. Tran, emdna-V10-07-14 <<
386 - define a G4FakeParticleID::fLastValue in the <<
387 delete G4FakeParticleID.cc, <<
388 solve arithmetic problems, <<
389 Added new mesoscopic model for dna chemistry <<
390 <<
391 21-10-2021, W.G.Shin, emdna-V10-07-13 <<
392 - Added a virtual classes for DNA geometry - G <<
393 Modified classes - G4DNAIRT, G4DNAIRTMolecul <<
394 G4ITModelProcessor, G4Sch <<
395 G4DNAMolecularReactionTab <<
396 <<
397 23-09-2021, A. Ribon, emdna-V10-07-12 <<
398 - G4ITTransportation, G4DNAElastic, G4DNAExcit <<
399 G4DNAVibExcitation, G4DNAAttachment, G4DNACh <<
400 G4DNAChargeIncrease, G4DNAElectronSolvation, <<
401 G4DNASecondOrderReaction, G4DNAElectronHoleR <<
402 G4DNABrownianTransportation : replaced hardw <<
403 with enum values introduced in the new class <<
404 <<
405 18-07-2021, V. Ivanchenko, emdna-V10-07-11 <<
406 - G4DNABohrExcitationModel2, G4DNABohrIonisati <<
407 G4VLEPSModel - updated interfaces to G4Physi <<
408 <<
409 16-07-2021, D. Sakata, emdna-V10-07-10 <<
410 - Fixed initialization error in G4DNAELSEPAEla <<
411 <<
412 28-06-2021, G. Cosmo, emdna-V10-07-09 <<
413 - Fixed compilation error in G4ITMultiNavigato <<
414 enabled. <<
415 <<
416 31-05-2021, D.Sakata S. Guatelli, emdna-V10-07 <<
417 - Added new classes G4DNADiracRMatrixExcitatio <<
418 G4DNAQuinnPlasmonExcitatio <<
419 G4DNARelativisticIonisatio <<
420 G4DNAPlasmonExcitation <<
421 - Modified G4DNAELSEPAElasticModel for gold <<
422 <<
423 9-05-2021, H.Tran, tag emdna-V10-07-07 <<
424 - Add IRT-syn model <<
425 <<
426 16-04-2021, B.Morgan, tag emdna-V10-07-06 <<
427 - Migrate build to modular CMake API <<
428 <<
429 27-04-2021, H.Tran, tag emdna-V10-07-05 <<
430 - G4DNAElectronHoleRecombination: added Octree <<
431 - G4DNABrownianTransportation: modified AlongS <<
432 - added OctreeFinder and IRTUtils <<
433 <<
434 26-04-2021, V.Ivanchenko, tag emdna-V10-07-04 <<
435 - G4DNABornAngle, G4DNARuddAngle - updated pri <<
436 <<
437 12-03-2021, L.Pandola, tag emdna-V10-07-03 <<
438 - Move DNA-related Unit Tests from lowenergy/t <<
439 <<
440 24-02-2021, G.Cosmo, tag emdna-V10-07-02 <<
441 - Fixed dependency on g4tools, now moved to ex <<
442 <<
443 16-02-2021, W.G.Shin, tag emdna-V10-07-01 <<
444 - G4DNAElectronHoleRecombination <<
445 Dissociation channel of electron-hole recomb <<
446 G4EmDNAChemistry, _option1, _option2, _optio <<
447 - G4DNAWaterDissociationDisplacer <<
448 Added the fragment displacement for new diss <<
449 <<
450 29-10-2020, G.Cosmo, tag emdna-V10-06-12 <<
451 - Fix thread contention on mutable data in G4D <<
452 help resolving observed crashes in MT runs. <<
453 Some code cleanup. <<
454 <<
455 27-10-2020, V.Ivanchenko, tag emdna-V10-06-11 <<
456 - G4DNAMolecularMaterial - removed commented l <<
457 - History file fixed <<
458 <<
459 25-10-2020, V.Ivanchenko, tag emdna-V10-06-10 <<
460 - G4DNAMolecularMaterial - attempt to fix nigh <<
461 in chem6 example - do not delete instance of <<
462 <<
463 24-10-2020, I. Hrivnacova, tag emdna-V10-06-09 <<
464 - Added dependency on analysis/g4tools in GNUm <<
465 required after analysis update (analysis-V10 <<
466 <<
467 12-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 <<
468 - Fixed coverity warning <<
469 <<
470 10-06-2020, S.Incerti, W.G.Shin, tag emdna-V10 <<
471 - Fixed coverity warnings <<
472 - Fix of IRT bug <<
473 (protection for the crash induced by empty re <<
474 <<
475 28-05-2020, B.Morgan, tag emdna-V10-06-06 <<
476 - Add missing G4analysismng module dependency <<
477 <<
478 20-05-20: W.G.Shin emdna-V10-06-05 <<
479 - Revised displacement of OH radicals of B1A1 <<
480 based on momentum conservation in G4DNAWaterDi <<
481 - Added missing History <<
482 <<
483 26-04-20: W.G.Shin emdna-V10-06-04 <<
484 - Fixed coverity test <<
485 <<
486 15-04-20: G.Cosmo emdna-V10-06-03 <<
487 - G4MoleculeDefinition: copy constructor and a <<
488 are not allowed (as for G4ParticleDefinition <<
489 <<
490 19-02-20: W.G.Shin emdna-V10-06-02 <<
491 - Fixed memory issue on G4DNAMolecularReaction <<
492 - Revised headeres of IRT classes <<
493 <<
494 12-02-20: W.G.Shin emdna-V10-06-01 <<
495 - Added protections floating point exception i <<
496 <<
497 10-01-20: W.G.Shin emdna-V10-06-00 <<
498 - Added classes for IRT <<
499 - Added features in management classes for IRT <<
500 G4ITModelProcessor ...) <<
501 - Added features in G4DNAMolecularReactionTabl <<
502 - Added molecules of Plante et al. (2017) (Oxy <<
503 <<
504 15-11-19: G.Cosmo emdna-V10-05-11 <<
505 - Fixed cases of implicit type conversions fro <<
506 <<
507 8-11-19: HT, tag emdna-V10-05-10 <<
508 - Fixed the exception divide by zero of diffus <<
509 G4DNABrownianTransportation::AlongStepGetPhysi <<
510 for the case of static molecules (DNA) (diffus <<
511 <<
512 24-10-19: J.Apostolakis, tag emdna-V10-05-09 <<
513 - Enabled G4ItNavigator{1,2} to flag if it enc <<
514 of external physical volume (meant for adapt <<
515 <<
516 19-10-19: WGS, SI, tag emdna-V10-05-08 <<
517 - Added new model G4DNAELSEPAElasticModel <<
518 <<
519 11-10-19: WGS, SI, tag emdna-V10-05-07 <<
520 - G4DNAOneStepThermalizationModel.* : <<
521 added Kreipl and Meesungnoen amorphous ice mod <<
522 - G4DNAWaterDissociationDisplacer* : updated <<
523 <<
524 03-06-2019, MK, tag emdna-V10-05-06 <<
525 - Fix GCC9 warnings <<
526 <<
527 26-03-2019, HT, tag emdna-V10-05-05 <<
528 - Added G4DNAMolecule <<
529 <<
530 10-03-2019, MK, tag emdna-V10-05-04 <<
531 - Fix reaction site issue <<
532 - Chemistry: clarify pointer ownership, clean <<
533 <<
534 11-03-2019, G.Cosmo, tag emdna-V10-05-03 <<
535 - Fixed typos in printouts in G4MolecularConfi <<
536 G4VITRestProcess, G4DNAElectronHoleRecombina <<
537 <<
538 18-01-2019, HT, tag emdna-V10-05-02 <<
539 - Transformed the exception into warning in G4 <<
540 <<
541 28-12-2018, MK, tag emdna-V10-05-01 <<
542 DEV-300 : G4DNAChemistryManager clarify pointe <<
543 <<
544 05-01-2019, HT, tag emdna-V10-05-00 <<
545 - moved the checking position of track status <<
546 in G4ITStepProcessor::SetInitialStep() <<
547 <<
548 01-09-2018, SI, tag emdna-V10-04-10 <<
549 renamed tag <<
550 <<
551 01-09-2018, SI, tag emdna-v10-04-09 <<
552 - bugzilla 2084 <<
553 https://bugzilla-geant4.kek.jp/show_bug.cgi?id <<
554 <<
555 30-07-2018, SI, tag emdna-V10-04-08 <<
556 - included upper energy limit of models (2) <<
557 <<
558 29-07-2018, SI, tag emdna-V10-04-07 <<
559 - included upper energy limit of models <<
560 <<
561 01-07-2018, SI, tag emdna-V10-04-06 <<
562 - added protection in Auger emission <<
563 <<
564 30-06-2018, MS, ZF, SI tag emdna-V10-04-05 <<
565 - updated Si mass in G4DNAGenericIonsManager <<
566 <<
567 22-06-2018, SI tag emdna-V10-04-04 <<
568 - fixed warnings in lepts models <<
569 <<
570 14-05-2018, SI tag emdna-V10-04-03 <<
571 - chemistry update by Mathieu <<
572 <<
573 01-05-2018, SI tag emdna-V10-04-02 <<
574 - chemistry update by Mathieu <<
575 <<
576 09-02-2018, M.Asai tag emdna-V10-04-01 <<
577 - G4DNAMolecularMaterial.cc : <<
578 GetDensityTableFor() and GetNumMolPerVolTabl <<
579 at G4State_Init rather than G4State_Idle. <<
580 - Co-works with run-V10-04-01 and global-V10-0 <<
581 <<
582 21-12-2017, G.Cosmo tag emdna-V10-04-00 <<
583 - Fixed self-consistency in headers (missing # <<
584 G4KDNode, G4MoleculeIterator and G4LEPTSDiff <<
585 Fixed spurious definition of G4IT namespace <<
586 Thanks to Raphael Isemann for reporting thes <<
587 <<
588 01-11-2017, MK tag emdna-V10-03-30 <<
589 - remove models/test directory <<
590 <<
591 31-10-2017, JA ( tag missing ) <<
592 - G4KDNode.hh: Add missing included file - nee <<
593 <<
594 16-08-2017, SI tag emdna-V10-03-28 <<
595 - updated variable types in models <<
596 <<
597 10-08-2017, SI tag emdna-V10-03-27 <<
598 - test <<
599 <<
600 10-08-2017, SI tag emdna-V10-03-26 <<
601 - same as previous <<
602 <<
603 09-08-2017, SI tag emdna-V10-03-25 <<
604 - same as previous <<
605 <<
606 09-08-2017, SI tag emdna-V10-03-24 <<
607 - G4DNAEmfietzoglouIonisationModel: added prot <<
608 <<
609 03-08-2017, VI tag emdna-V10-03-23 <<
610 - G4DNAExcitation, G4DNAIonisation - make cohe <<
611 <<
612 28-07-2017, SI, tag emdna-V10-03-22 <<
613 - added stationary mode flag to CPA100 ionisat <<
614 <<
615 04-07-2017, SI, tag emdna-V10-03-21 <<
616 - added tagging of atom. deexc. products in io <<
617 <<
618 31-05-2017, SM, tag emdna-V10-03-20 <<
619 - Correct windows issues with path of diff. CS <<
620 <<
621 31-05-2017, SI, tag emdna-V10-03-19 <<
622 - roll-back (Windows issues with previous tag) <<
623 <<
624 24-05-2017, SI, tag emdna-V10-03-18 <<
625 - added tagging of atom. deexc. products in io <<
626 <<
627 11-05-2017, VI tag emdna-V10-03-17 <<
628 - fix for gcc 7.1 warnings in G4DNACrossSectio <<
629 <<
630 10-05-2017, NL, MK, SI, tag emdna-V10-03-16 <<
631 - fix for gcc 7.1 warnings in G4DNACrossSectio <<
632 <<
633 03-05-2017, SM, tag emdna-V10-03-15 <<
634 - add the new G4DNADummyModel and allow the co <<
635 <<
636 27-04-2017, SM, tag emdna-V10-03-14 <<
637 - correct small typo mistakes. <<
638 <<
639 27-04-2017, SM, tag emdna-V10-03-13 <<
640 - update Models/G4DNAModelInterface to correct <<
641 <<
642 10-03-2017, MK, tag emdna-V10-03-12 <<
643 - update utils/GNUmakefile <<
644 <<
645 13-02-2017, MK, tag emdna-V10-03-11 <<
646 - G4DNAMolecularMaterial: update doxygen doc <<
647 <<
648 13-02-2017, MK, tag emdna-V10-03-10 <<
649 - G4DNAMolecularMaterial: <<
650 remove newly introduced methods, add fatal e <<
651 add doxygen documentation <<
652 <<
653 10-02-2017, MK, tag emdna-V10-03-09 <<
654 - Introducing G4PhysChemIO <<
655 - Move call to G4TrackList::Pop(track) from G4 <<
656 to G4ITTrackHolder. And make sure track stat <<
657 when G4ITTrackHolder::PushToKill is called. <<
658 <<
659 09-02-2017, MK, tag emdna-V10-03-08 <<
660 - G4KDNode.hh: remove unused G4ThreeVector hea <<
661 - G4KDMap.hh: int->size_t + indentation <<
662 - G4KDMap.cc: int->size_t <<
663 - G4IT & G4Molecule: template specialization <<
664 template<> G4KDNode<G4IT / G4Molecule>::~G4K <<
665 <<
666 24-01-2017, SM, tag emdna-V10-03-07 <<
667 - add a ifdef to remove a warning (windows onl <<
668 <<
669 23-01-2017, SM, tag emdna-V10-03-06 <<
670 - add missing G4DNAModelInterface files (.hh a <<
671 <<
672 23-01-2017, SM CV, tag emdna-V10-03-05 <<
673 - add new G4DNAPTB* classes and the structure <<
674 <<
675 14-01-2017, MK, tag emdna-V10-02-37 <<
676 - Prevent a crash when calling G4ITTrackingMan <<
677 the UserTimeStepAction::PostTimeStepAction <<
678 - Add missing: G4ITTrackingManager* G4Schedule <<
679 <<
680 28-12-2016, SI, tag emdna-V10-03-04 <<
681 - extended upper energy limit of protons for <<
682 G4DNARuddIonisationExtendedModel <<
683 <<
684 27-12-2016, SI, tag emdna-V10-03-03 <<
685 - updated references of CPA100 classes <<
686 <<
687 23-12-2016, SI, tag emdna-V10-03-02 <<
688 - updated sources.cmake <<
689 <<
690 23-12-2016, SI, tag emdna-V10-03-01 <<
691 - commit of first CPA100 classes, part 2 <<
692 <<
693 21-12-2016, SI, tag emdna-V10-03-00 <<
694 - commit of first CPA100 classes <<
695 <<
696 27-11-2016, MK, tag emdna-V10-02-36 <<
697 - G4Electron_aq: correct charge <<
698 - G4DNADamages -> G4DNADamage <<
699 <<
700 17-11-2016, MK, tag emdna-V10-02-35 <<
701 - G4ManyFastLists.hh: iterator::GetTrackList() <<
702 <<
703 16-11-2016, MK, tag emdna-V10-02-34 <<
704 - G4VMolecularDissociationDisplacer & G4DNAWat <<
705 displacement types can be thread shared <<
706 - G4TrackState: Move implementation of static <<
707 G4VTrackStateID::Create() to c <<
708 <<
709 15-11-2016, MK, tag emdna-V10-02-33 <<
710 - G4VMolecularDissociationDisplacer.cc: add mi <<
711 <<
712 14-11-2016, MK, tag emdna-V10-02-32 <<
713 - Separate def and impl of dissociation flag t <<
714 windows platforms <<
715 <<
716 14-11-2016, MK, tag emdna-V10-02-31 <<
717 - G4DNAOneStepThermalizationModel.cc: <<
718 tag init constexpr factor with number rather <<
719 <<
720 14-11-2016, MK, tag emdna-V10-02-30 <<
721 - Use CLHEP::pi instead of M_PI <<
722 <<
723 14-11-2016, MK, tag emdna-V10-02-29 <<
724 - Correct bracket enclosing <<
725 <<
726 14-11-2016, MK, tag emdna-V10-02-28 <<
727 - G4VMoleculeCounter: move imp of static metho <<
728 - Update displacers, oneStepTherm <<
729 - WaterDisplacer: change the electron thermali <<
730 - OneStepTherm: two inner thermalization model <<
731 - Adds and use G4CTCounter <<
732 <<
733 02-11-2016, MK, tag emdna-V10-02-27 <<
734 - add G4VMoleculeCounter & enable using custom <<
735 - pass location information to molecule counte <<
736 - G4ITNavigator2: relocate voxelNavigator befo <<
737 computeStep & computeSafety <<
738 <<
739 07-08-2016, SI, tag emdna-V10-02-26 <<
740 - added stationnary mode to sub-excitation ele <<
741 <<
742 23-06-2016, MK <<
743 - G4Scheduler: move G4IosFlagsSaver to Process <<
744 <<
745 3-06-2016, MK, tag emdna-V10-02-25 <<
746 - G4DNAScreenedRutherfordElasticModel: modify <<
747 at init time <<
748 - G4DNAUeharaScreenedRutherfordElasticModel: m <<
749 <<
750 3-06-2016, MK, tag emdna-V10-02-24 <<
751 - G4DNAScreenedRutherfordElasticModel.hh: remo <<
752 SetKillBelowThreshold deprecated <<
753 - G4DNAScreenedRutherfordElasticModel.cc: remo <<
754 prevent erasing/rewriting data (use isInit) <<
755 - G4DNAChampionElasticModel.hh: rearrange decl <<
756 - G4DNAChampionElasticModel.cc: move up if (i <<
757 - G4DNAUeharaScreenedRutherfordElasticModel.cc <<
758 model used for another part than e- <<
759 <<
760 1-06-2016, MK, tag emdna-V10-02-23 <<
761 - G4DNAChemistryManager::CreateWaterMolecule: <<
762 logic for interface with physics models <<
763 <<
764 31-05-2016, MK, tag emdna-V10-02-22 <<
765 - G4DNAChampionElasticModel.cc: reset check ek <<
766 <<
767 28-05-2016, MK, tag emdna-V10-02-21 <<
768 - G4DNAChampionElasticModel.cc: add missing "s <<
769 one of the previous tags <<
770 <<
771 19-05-2016, MK, tag emdna-V10-02-20 <<
772 - G4ITNavigator: remove warnings on gcc6.1 <<
773 <<
774 17-05-2016, MK, tag emdna-V10-02-19 <<
775 - G4DNAElectronSolvation, G4DNAOneStepThermali <<
776 correct model and process names for solvation <<
777 <<
778 12-05-2016, MK, tag emdna-V10-02-18 <<
779 - G4DNAChampionElasticModel.hh: <<
780 * GetKillBelowThreshold is deprecated <<
781 * Removed attributes: killBelowEnergy, lowEne <<
782 tableFile, tableData <<
783 * Method Theta(): remove G4ParticleDefinition <<
784 - G4DNAUeharaScreenedRutherfordElasticModel.hh <<
785 * SetKillBelowThreshold, GetKillBelowThreshol <<
786 (use G4LowECapture or G4DNAElectronSolvatatio <<
787 * SelectHighEnergyLimit uses SetHighEnergyLim <<
788 emitted when used <<
789 * Removed attributes: killBelowEnergy, lowEne <<
790 - G4DNAChampionElasticModel.cc & G4DNAUeharaSc <<
791 * Verbose check only if preprocessor flag is <<
792 * Energy boundaries checked in Initialise() - <<
793 * Call to G4Electron removed in Initialise() <<
794 * Cleanup CrossSectionPerVolume by removing u <<
795 * SampleSecondaries(): remove "kill below thr <<
796 * G4DNAChampionElasticModel::Theta remove che <<
797 - G4DNAOneStepThermalizationModel.cc: <<
798 * Check verbose flag if a preprocessor flag i <<
799 * Remove call to G4Electron at initialization <<
800 - G4DNATransformElectronModel.cc: <<
801 * Check verbose flag if a preprocessor flag i <<
802 * Remove call to G4Electron at initialization <<
803 * Add check if(G4DNAChemistryManager::IsActiv <<
804 created; otherwise, the primary electron is <<
805 <<
806 30-04-2016, MK, tag emdna-V10-02-17 <<
807 - G4VUserChemistryList: Add flag fIsPhysicsCon <<
808 <<
809 30-04-2016, MK, tag emdna-V10-02-16 <<
810 - G4VUserChemistryList: remove a if statement <<
811 - G4MoleculeCounter: at initialization time, p <<
812 unregistered molecule definition <<
813 <<
814 22-04-2016, MK, tag emdna-V10-02-15 <<
815 - G4DNAElectronSolvatation -> G4DNAElectronSol <<
816 - G4DNASancheExcitationModel: remove warning w <<
817 <<
818 22-04-2016, MK, tag emdna-V10-02-14 <<
819 - G4DNAMeltonAttachmentModel, G4DNASancheExcit <<
820 remove usage of internal energy boundaries <<
821 <<
822 19-03-2016, SI, tag emdna-V10-02-13 <<
823 - added nrj extensibility to SR and USR models <<
824 <<
825 11-03-2016, SI, tag emdna-V10-02-12 <<
826 -roll back to files in emdna-V10-02-06 <<
827 <<
828 10-03-2016, SI, tag emdna-V10-02-11 <<
829 -further cleaning of G4DNAUeharaScreenedRuther <<
830 and G4DNAScreenedRutherfordElasticModel <<
831 <<
832 10-03-2016, SI, tag emdna-V10-02-10 <<
833 -further cleaning of G4DNAUeharaScreenedRuther <<
834 <<
835 07-03-2016, SI, tag emdna-V10-02-09 <<
836 -added possibility to extend applicability lim <<
837 of G4DNAUeharaScreenedRutherfordElasticModel <<
838 <<
839 06-03-2016, SI, tag emdna-V10-02-08 <<
840 -removed useless G4Pow declaration <<
841 <<
842 04-03-2016, SI, tag emdna-V10-02-07 <<
843 -replaced std::log by G4Log <<
844 -replaced std::log10() by G4Log()/g4pow->logZ( <<
845 <<
846 02-03-2016, SI, tag emdna-V10-02-06 <<
847 -replaced std::exp by G4Exp <<
848 <<
849 02-03-2016, SI, tag emdna-V10-02-05 <<
850 -replaced std::exp by G4Exp <<
851 <<
852 02-03-2016, SI, tag emdna-V10-02-04 <<
853 -replaced std::exp by G4Exp <<
854 <<
855 01-03-2016, SI, tag emdna-V10-02-03 <<
856 * update of fast computation of: <<
857 -G4DNAScreenRutherfordElasticModel <<
858 -G4DNAUeharaScreenRutherfordElasticModel <<
859 by S. Okada (KEK, JP) <<
860 <<
861 17-02-2016, MK, tag emdna-V10-02-02 <<
862 * G4MoleculeCounter: remove check of c++ versi <<
863 <<
864 16-12-2015, SI, tag emdna-V10-02-01 <<
865 * Ionisation models : in SampleSecondaries: <<
866 added protection on energy for interpolation m <<
867 <<
868 16-12-2015, SI, tag emdna-V10-02-00 <<
869 * G4DNAIonElasticModel::SampleSecondaries: add <<
870 energy <<
871 <<
872 13-11-2015, MK, tag emdna-V10-01-55 <<
873 * G4MoleculeCounter::Use / InUse => move imple <<
874 file <<
875 <<
876 10-11-2015, MK, tag emdna-V10-01-54 <<
877 * remove unused variables <<
878 <<
879 10-11-2015, MK, tag emdna-V10-01-53 <<
880 * Coverity fixes <<
881 <<
882 06-11-2015, MK, tag emdna-V10-01-52 <<
883 * G4DNAWaterDissociationDisplacer: remove usel <<
884 <<
885 06-11-2015, MK, tag emdna-V10-01-51 <<
886 * G4FastList.hh : use WatcherSet::iterator to <<
887 on x86_64-slc6-gcc49-Seq-BoundsCheck-UseIntern <<
888 <<
889 06-11-2015, MK, tag emdna-V10-01-50 <<
890 * Avoid indirect include of G4TrackState to G4 <<
891 * Reorganize includes <<
892 * Add G4ITStepProcessorState_Lock.hh <<
893 <<
894 06-11-2015, MK, tag emdna-V10-01-49 <<
895 * G4MoleculeCounter: do not initialize compDou <<
896 to other value than 0 - causing compilation er <<
897 * G4DNAOneStepThermalizationModel: do not incl <<
898 but in the source file - causing crashes on wi <<
899 <<
900 04-11-2015, MK, tag emdna-V10-01-48 <<
901 * G4DNARevertProbability: added and used in G4 <<
902 * utils/sources.cmake: G4DNARevertProbability. <<
903 * G4DNAWaterDissociationDisplacer: fix and spe <<
904 * models/GNUmakefile: add missing dependency <<
905 * G4DNAOneStepThermalizationModel: delete navi <<
906 is deleted <<
907 * G4FastList.icc: use typedef WatcherSet even <<
908 * G4ITModelProcessor: add RegisterModel, GetCo <<
909 fComputeTimeStep & fComputeReaction flags <<
910 * G4DNAElectronHoleRecombination: enable using <<
911 all dissociation products have been defined <<
912 into account) <<
913 * G4DNAMolecularReactionTable: delete reaction <<
914 <<
915 03-11-2015, MK, tag emdna-V10-01-47 <<
916 * G4Scheduler: Update time before G4ITStepProc <<
917 * G4ITStepProcessor::DoIt : reset leading trac <<
918 the call <<
919 <<
920 03-11-2015, MK, tag emdna-V10-01-46 <<
921 * G4MolecularDissociation <<
922 * G4DNAOneStepSolvatationModel -> G4DNAOneStep <<
923 Avoid placing products outside volume of the <<
924 (causing navigator complains) <<
925 <<
926 03-11-2015, MK, tag emdna-V10-01-45 <<
927 * G4Serialize: Add definition in header for G4 <<
928 <<
929 02-11-2015, MK, tag emdna-V10-01-44 <<
930 * G4Serialize: remove inline in front of templ <<
931 * molecules: fix unit tests <<
932 * G4DNAElectronHoleRecombination: add missing <<
933 * G4MoleculeCounter: add a flag to check or no <<
934 * G4MoleculeTable: do not store G4MolecularCon <<
935 -> G4MolecularConfMan is taking care of this <<
936 <<
937 30-10-2015, MK, tag emdna-V10-01-43 <<
938 * Bug solved in G4MoleculeCounter <<
939 and made compatible wih G4DNAElectronHoleRec <<
940 * Unit tests corrected <<
941 * G4VITDiscreteProcess added <<
942 * G4ReactionTableMessenger added <<
943 * Intermediate update for 10.2 release <<
944 <<
945 27-10-2015, MK, tag emdna-V10-01-42 <<
946 * G4ITStepProcessor: clean dynamic_cast to G4V <<
947 <<
948 26-10-2015, MK, tag emdna-V10-01-41 <<
949 * Sanche model: try to solve std::vector out o <<
950 <<
951 23-10-2015, MK, tag emdna-V10-01-40 <<
952 * remove all CLHEP::shared_ptr usage <<
953 <<
954 23-10-2015, CV, SM, tag emdna-V10-01-39 <<
955 * Addded base class G4VDNAPTBModel <<
956 <<
957 28-09-2015, SI, tag emdna-V10-01-38 <<
958 * updated ion selection in G4DNARuddIonisation <<
959 <<
960 19-09-2015, MK, tag emdna-V10-01-37 <<
961 * added proton ionisation scaling in G4DNABorn <<
962 * changed ion selection in G4DNARuddIonisation <<
963 <<
964 17-09-2015, MK, tag emdna-V10-01-36 <<
965 * G4MoleculeGun: Remove compilation warnings <<
966 <<
967 04-09-2015 MK, tag emdna-V10-01-35 <<
968 * Fix G4MoleculeGun compilation errors <<
969 <<
970 03-09-2015 SI, tag emdna-V10-01-34 <<
971 * Added stationary regime to all inelastic mod <<
972 <<
973 19-08-2015, MK <<
974 * Update G4MoleculeGun & G4MoleculeGunMessenge <<
975 - compatible with both Smoluchowski & Gilles <<
976 <<
977 15-08-2015, S.Incerti, tag emdna-V10-01-33 <<
978 * Added easier handling of cumulative proba. i <<
979 <<
980 13-08-2015, G.Cosmo, tag emdna-V10-01-32, 31 <<
981 * Fixed compilation warning on clang for misma <<
982 declaration of G4MoleculeShoot. <<
983 <<
984 13-08-2015, G.Cosmo, tag emdna-V10-01-30 <<
985 * Fixed compilation warning on clang for misma <<
986 declaration of G4MoleculeShootMessenger. <<
987 <<
988 12-08-2015, MK, tag emdna-V10-01-29 <<
989 * Add G4Serialize in the build tree temporaril <<
990 <<
991 12-08-2015, MK, tag emdna-V10-01-28 <<
992 * G4Serialize added <<
993 <<
994 12-08-2015, MK <<
995 * G4memory : quick removal of CLHEP::shared_pt <<
996 <<
997 24-07-2015, MK <<
998 - G4MolecularReactionTable <<
999 * Add get methods <<
1000 - G4MoleculeGun, G4MoleculeGunMessenger <<
1001 * Molecule gun : place randomly in a box <<
1002 <<
1003 15-07-2015, MK <<
1004 - G4DNAAttachment, G4DNAChargeDecrease, G4DNA <<
1005 G4DNAExcitation, G4DNAIonisation <<
1006 * processes & models initialisation again <<
1007 <<
1008 15-07-2015, MK, tag emdna-V10-01-26 <<
1009 -G4ITModelProcessor & G4ITStepProcessor: <<
1010 * add macro to prevent warnings in non-verbo <<
1011 <<
1012 11-07-2015, MK, tag emdna-V10-01-25 <<
1013 - Add G4IosFlagsSaver.hh to sources.cmake <<
1014 - G4IosFlagsSaver.hh add an extra line of the <<
1015 <<
1016 10-07-2015, MK, tag emdna-V10-01-24 <<
1017 - G4DNA Processes : correct setup of energy b <<
1018 - G4DNAElectronHoleRecombination remove verbo <<
1019 - G4DNADingfelderChargeDecreaseModel: add hol <<
1020 - G4DNAEmfietzoglouXModel: specify energy bou <<
1021 <<
1022 08-07-2015, MK, tag emdna-V10-01-23 <<
1023 - G4ITLeadingTracks added <<
1024 - G4ITSteppingVerbose added <<
1025 - G4IosFlagsSaver added <<
1026 - G4VITSteppingVerbose & G4ITSteppingVerbose <<
1027 * new UI command /chem/tracking/verbose 1,2 <<
1028 - G4MoleculeDefinition: <<
1029 ::SetFormatedName added <<
1030 ::NewConfiguration methods added <<
1031 ::NewConfiguration added <<
1032 ::AddDecayChannel per G4MolecularConfigurat <<
1033 And replace ::AddDecayChannel for a molecul <<
1034 ::Finalize added <<
1035 - G4MolecularConfiguration: <<
1036 * new configuration can be defined by label <<
1037 * Add Finalize method and add exception if <<
1038 the G4MolecularConfiguration is done after <<
1039 - G4MolecularDissociationChannel & G4DNAMolec <<
1040 G4DNAMolecularEncounterStepper use G4Molecula <<
1041 than molecule models <<
1042 - G4Molecule add constructor where only G4Mol <<
1043 - G4Scheduler : remove entirely track specifi <<
1044 - G4ITXProcess : deal with tracks <<
1045 - G4ITTrackingManager is a "service" to start <<
1046 - G4DNAElectronHoleRecombination added <<
1047 <<
1048 06-07-2015, Shogo Okada, SI, tag emdna-V10-01 <<
1049 - G4DNAEmfietzoglouIonisationModel: removed c <<
1050 fasterCode usage on shell selection. <<
1051 <<
1052 26-06-2015, MK <<
1053 - G4DNAIonElasticModel: modify "validated" to <<
1054 warning message description <<
1055 <<
1056 16-06-205, MK <<
1057 - Add G4Scheduler::GetGun() <<
1058 <<
1059 16-06-2015, MK, tag emdna-V10-01-21 <<
1060 - G4DNAElastic.cc : add elseif(name == ... <<
1061 - G4DNAIonElasticModel: clean and fix double <<
1062 <<
1063 12-06-2015, MK, tag emdna-V10-01-20 <<
1064 - remove virtual keyword from G4IT::GetPositi <<
1065 <<
1066 04-06-2015, MK <<
1067 - just cosmetics <<
1068 - remove virtual keyword from G4IT::operator[ <<
1069 <<
1070 26-05-2015, Robert Hatcher, tag emdna-V10-01- <<
1071 - Remove unnecessary "using namespace std" fr <<
1072 that causes problems w/ G4AnyMethod & G4Gen <<
1073 when using clang and/or vc12 <<
1074 - Fully qualify std::string elsewhere as need <<
1075 <<
1076 22-05-2015, John Allison, tag emdna-V10-01-18 <<
1077 - G4ITTrackHolder.cc: Replaced "G4Threading:: <<
1078 "G4Threading::IsMasterThread()". <<
1079 <<
1080 17-05-2015, MK, tag emdna-V10-01-17 <<
1081 - G4DNABornIonisationModel1/2 & G4DNABornExci <<
1082 - Correct sources.cmake <<
1083 - Born headears: includes both model versions <<
1084 <<
1085 16-05-2015, MK, tag emdna-V10-01-16 <<
1086 - Add G4DNAEmfietzoglouExcitationModel <<
1087 - Add G4DNAEmfietzoglouIonisationModel <<
1088 - Add G4DNAUeharaScreenedRutherfordElasticMod <<
1089 - Add G4DNABornIonisationModel2 (temporary) <<
1090 - Add G4DNABornExcitationModel2 (temporary) <<
1091 <<
1092 15-05-2015, MK, tag emdna-V10-01-15 <<
1093 - Postpone G4DNASmoluchowskiDiffusion until c <<
1094 <<
1095 14-05-2015, MK, tag emdna-V10-01-14 <<
1096 - G4DNASmoluchowskiDiffusion: std::sqrt -> sq <<
1097 <<
1098 14-05-2015, MK, tag emdna-V10-01-13 <<
1099 - G4DNASmoluchowskiDiffusion: try to solve co <<
1100 - G4ITReaction: try to solve compilation erro <<
1101 <<
1102 12-05-2015, MK, tag emdna-V10-01-12 <<
1103 - G4DNASmoluchowskiDiffusion: try to solve co <<
1104 <<
1105 12-05-2015, MK, tag emdna-V10-01-11 <<
1106 - Add G4DNASmoluchowskiDiffusion to the build <<
1107 <<
1108 11-05-2015, MK, tag emdna-V10-01-10 <<
1109 - G4DNABornExcitationModel: <<
1110 +Add GetPartialCrossSection <<
1111 +Code cleaning <<
1112 - G4DNAMillerGreenExcitationModel: <<
1113 +Add GetPartialCrossSection <<
1114 - G4DNAChemistryManager::GetValue(...) added <<
1115 <<
1116 02-05-2015, MK <<
1117 - Update G4TrackState & related classes <<
1118 - G4DNABrownianTransportation: <<
1119 +Add constructor & destructor to G4Brownian <<
1120 +comment useless method <<
1121 - G4Scheduler: <<
1122 +Add fStopTime+Watched times+PrintWhyDoYouS <<
1123 +remove fTmpEndTime <<
1124 +Add CanICarryOn <<
1125 - add G4DNASmoluchowskiDiffusion *PRELIMINARY <<
1126 <<
1127 18-03-2015, MK, tag emdna-V10-01-08 <<
1128 - Same as before, just add the missing Histor <<
1129 <<
1130 18-03-2015, MK, tag emdna-V10-01-07 <<
1131 - G4UserTimeStepAction::UserReactionAction : <<
1132 instead of a reference <<
1133 <<
1134 12-02-2015, MK, tag emdna-V10-01-06 <<
1135 - G4ITReaction: Remove "gAll" introduced for <<
1136 - G4ITModelProcessor: Remove "assert" introdu <<
1137 - G4ITTransportation: Remove extra parenthesi <<
1138 <<
1139 11-02-2015, MK, tag emdna-V10-01-05 <<
1140 - Fix reproductibility of the chemistry modul <<
1141 - Fix the "no reaction table found" bug: G4IT <<
1142 - G4shared_ptr refers to std::shared_ptr when <<
1143 <<
1144 16-01-2015, SI, tag emdna-V10-01-04 <<
1145 - added Fe56 into G4DNARuddIonisationExtended <<
1146 <<
1147 14-12-2014, MK, tag emdna-V10-01-03 <<
1148 - BornIonisation: correct array cleaning <<
1149 - ScreenRutherfordElastic: correct retrieval <<
1150 <<
1151 13-12-2014, SI, tag emdna-V10-01-02 <<
1152 - Added elastic model by H. Tran. <<
1153 <<
1154 12-12-2014, G.Cosmo, tag emdna-V10-01-01 <<
1155 - Explicitly initialise to zero TLS pointers <<
1156 to allow for compilation on Linux/clang-3.5 <<
1157 <<
1158 05-12-2014, G.Cosmo, tag emdna-V10-01-00 <<
1159 - Corrected sources.cmake in management and m <<
1160 include missing files: <<
1161 G4ITTransportationManager.icc <<
1162 G4KDNode.icc <<
1163 G4KDTree.icc <<
1164 G4MoleculeFinder.hh <<
1165 16
1166 01-12-2014, MK, tag emdna-V10-00-63 17 01-12-2014, MK, tag emdna-V10-00-63
1167 - Temporary fix for avoiding bad relocation o 18 - Temporary fix for avoiding bad relocation of Brownian particles
1168 It slows the computation by forcing the Brown 19 It slows the computation by forcing the Brownian particles to stop at the volumes' boundaries
1169 - Transform fStopAndAlive to fStopAndKill in 20 - Transform fStopAndAlive to fStopAndKill in G4DNABrownianTransportation
1170 when the particle has reached a boundary 21 when the particle has reached a boundary
1171 22
1172 28-11-2014, MK, tag emdna-V10-00-62 23 28-11-2014, MK, tag emdna-V10-00-62
1173 - Retag 24 - Retag
1174 25
1175 28-11-2014, MK, tag emdna-V10-00-61 26 28-11-2014, MK, tag emdna-V10-00-61
1176 - Fix chemistry initialization in standalone 27 - Fix chemistry initialization in standalone
1177 - Fix Brownian navigation 28 - Fix Brownian navigation
1178 - Some fixes related to scheduler 29 - Some fixes related to scheduler
1179 - Rename macro commands to reflect usage of s 30 - Rename macro commands to reflect usage of scheduler
1180 - Enhance comments 31 - Enhance comments
1181 32
1182 24-11-2014, MK, tag emdna-V10-00-60 33 24-11-2014, MK, tag emdna-V10-00-60
1183 - Remove a useless but also fatal (when chemi 34 - Remove a useless but also fatal (when chemistry is not activated) exception
1184 35
1185 24-11-2014, MK, tag emdna-V10-00-59 36 24-11-2014, MK, tag emdna-V10-00-59
1186 - Enhance doxygen comments in G4DNABrownianTr 37 - Enhance doxygen comments in G4DNABrownianTransportation
1187 - Remove useless verbose 38 - Remove useless verbose
1188 - Try to compile on all platforms 39 - Try to compile on all platforms
1189 - Correct initialization of G4DNAChemistryMan 40 - Correct initialization of G4DNAChemistryManager
1190 - Simplify initialization of chemistry from u 41 - Simplify initialization of chemistry from user applications
1191 Just registering constructor is enough to i 42 Just registering constructor is enough to initialized the chemistry
1192 43
1193 24-11-2014, MK, tag emdna-V10-00-58 44 24-11-2014, MK, tag emdna-V10-00-58
1194 - G4FastList: remove all friend declarations 45 - G4FastList: remove all friend declarations
1195 46
1196 22-11-2014, MK, tag emdna-V10-00-57 47 22-11-2014, MK, tag emdna-V10-00-57
1197 - Another attempt to compile G4FastList on al 48 - Another attempt to compile G4FastList on all platforms
1198 49
1199 22-11-2014, MK, tag emdna-V10-00-56 50 22-11-2014, MK, tag emdna-V10-00-56
1200 - Attempt to compile G4FastList on all platfo 51 - Attempt to compile G4FastList on all platforms
1201 52
1202 21-11-2014, MK, tag emdna-V10-00-55 53 21-11-2014, MK, tag emdna-V10-00-55
1203 - Attempt to compile G4FastList with clang 54 - Attempt to compile G4FastList with clang
1204 55
1205 21-11-2014, MK, tag emdna-V10-00-54 56 21-11-2014, MK, tag emdna-V10-00-54
1206 - Put back G4DNABrownianTransportation::fUseM 57 - Put back G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary
1207 to true as long as the small distances to bou << 58 to true as long as the small distances to boundaries sent back by the navigator
1208 are not understood 59 are not understood
1209 - Update G4ITNavigator2 to the G4Navigator of 60 - Update G4ITNavigator2 to the G4Navigator of John
1210 61
1211 21-11-2014, MK, tag emdna-V10-00-53 62 21-11-2014, MK, tag emdna-V10-00-53
1212 - Attempt to solve the 'No track found' bug b << 63 - Attempt to solve the 'No track found' bug by using G4FastList and
1213 G4ManyFastLists - A 'list watcher' is added 64 G4ManyFastLists - A 'list watcher' is added
1214 - G4DNABrownianTransportation::fUseMaximumTim 65 - G4DNABrownianTransportation::fUseMaximumTimeBeforeReachingBoundary
1215 is false by default --> uses the random time << 66 is false by default --> uses the random time computation for crossing
1216 boundaries 67 boundaries
1217 68
1218 20-11-2014, SI, tag emdna-V10-00-52 69 20-11-2014, SI, tag emdna-V10-00-52
1219 - Improved error message for missing data in 70 - Improved error message for missing data in PW elastic model
1220 71
1221 08-11-2014, MK, tag emdna-V10-00-51 72 08-11-2014, MK, tag emdna-V10-00-51
1222 - Add an exception in G4MoleculeTable::GetMod 73 - Add an exception in G4MoleculeTable::GetModel/GetDefinition
1223 when the asked item is not found 74 when the asked item is not found
1224 75
1225 03-11-2014 MK, tag emdna-V10-00-50 76 03-11-2014 MK, tag emdna-V10-00-50
1226 - correct track creation by G4MoleculeGunMess 77 - correct track creation by G4MoleculeGunMessenger
1227 78
1228 03-11-2014 MK, tag emdna-V10-00-49 79 03-11-2014 MK, tag emdna-V10-00-49
1229 - Remove useless classes 80 - Remove useless classes
1230 - Correct a bug in G4MoleculeGun 81 - Correct a bug in G4MoleculeGun
1231 82
1232 28-10-2014 PA, tag emdna-V10-00-48 83 28-10-2014 PA, tag emdna-V10-00-48
1233 - correct compilation warnings 84 - correct compilation warnings
1234 85
1235 28-10-2014 PA, tag emdna-V10-00-47 86 28-10-2014 PA, tag emdna-V10-00-47
1236 - correct compilation warnings 87 - correct compilation warnings
1237 88
1238 28-10-2014 PA, tag emdna-V10-00-46 89 28-10-2014 PA, tag emdna-V10-00-46
1239 - correction in sources.cmake 90 - correction in sources.cmake
1240 91
1241 28-10-2014 PA, tag emdna-V10-00-45 92 28-10-2014 PA, tag emdna-V10-00-45
1242 - retag to add LEPTS 93 - retag to add LEPTS
1243 94
1244 28-10-2014 PA, tag emdna-V10-00-44 95 28-10-2014 PA, tag emdna-V10-00-44
1245 - add LEPTS 96 - add LEPTS
1246 97
1247 25-10-2014 MK, tag emdna-V10-00-43 98 25-10-2014 MK, tag emdna-V10-00-43
1248 - remove useless G4VITScheduler 99 - remove useless G4VITScheduler
1249 100
1250 25-10-2014 MK, tag emdna-V10-00-42 101 25-10-2014 MK, tag emdna-V10-00-42
1251 - correct warnings 102 - correct warnings
1252 103
1253 24-10-2014 MK, tag emdna-V10-00-41 104 24-10-2014 MK, tag emdna-V10-00-41
1254 - G4ITTimeStepper-->G4VScheduler 105 - G4ITTimeStepper-->G4VScheduler
1255 - G4ITStepManager-->G4ITScheduler 106 - G4ITStepManager-->G4ITScheduler
1256 - G4ITStepManager-->G4ITSchedulerMessenger 107 - G4ITStepManager-->G4ITSchedulerMessenger
1257 - G4AllITManager & G4ITManager deleted 108 - G4AllITManager & G4ITManager deleted
1258 - G4ITFinder added 109 - G4ITFinder added
1259 - G4VITTrackHolder added 110 - G4VITTrackHolder added
1260 - G4ITTrackHolder implemented 111 - G4ITTrackHolder implemented
1261 - code cleaned + useless classes removed 112 - code cleaned + useless classes removed
1262 113
1263 24-10-2014 MK, tag emdna-V10-00-40 114 24-10-2014 MK, tag emdna-V10-00-40
1264 - G4ITStepManager: remove verbose at closure 115 - G4ITStepManager: remove verbose at closure time
1265 116
1266 21-10-2014 MK, tag emdna-V10-00-39 117 21-10-2014 MK, tag emdna-V10-00-39
1267 - try to solve crash at closure time 118 - try to solve crash at closure time
1268 119
1269 21-10-2014 MK, tag emdna-V10-00-38 120 21-10-2014 MK, tag emdna-V10-00-38
1270 - remove G4MolecularConfiguration from the ma 121 - remove G4MolecularConfiguration from the manager's
1271 table when deleted 122 table when deleted
1272 - update disclaimer 123 - update disclaimer
1273 124
1274 17-10-2014 MK, tag emdna-V10-00-37 125 17-10-2014 MK, tag emdna-V10-00-37
1275 - clean code 126 - clean code
1276 - G4ITStepManager: one can ask why simulation 127 - G4ITStepManager: one can ask why simulation stops
1277 - remove useless verbose 128 - remove useless verbose
1278 129
1279 17-10-2014 MK, tag emdna-V10-00-36 130 17-10-2014 MK, tag emdna-V10-00-36
1280 - Call G4ITTimeStepper in ChemMan::InitMaster 131 - Call G4ITTimeStepper in ChemMan::InitMaster
1281 - Remove inappropriate method in G4ITTrackHol 132 - Remove inappropriate method in G4ITTrackHolder
1282 - G4DNASecondOrderReaction uses G4ITTimeStepp 133 - G4DNASecondOrderReaction uses G4ITTimeStepper::GetTimeStep
1283 134
1284 10-10-2014 MK, tag emdna-V10-00-35 135 10-10-2014 MK, tag emdna-V10-00-35
1285 Avoid use of std::map at the applicatio 136 Avoid use of std::map at the application level in TimeStepAction
1286 137
1287 07-10-2014 MK, tag emdna-V10-00-34 138 07-10-2014 MK, tag emdna-V10-00-34
1288 G4MolecularReactionTable : translate fr 139 G4MolecularReactionTable : translate from french to english
1289 G4DNAChemistryManager : remove usage of 140 G4DNAChemistryManager : remove usage of G4ITStepManager
1290 G4ITTimeStepper : use temporally as int 141 G4ITTimeStepper : use temporally as interface to G4ITStepManager
1291 142
1292 07-10-2014 MK, tag emdna-V10-00-33 143 07-10-2014 MK, tag emdna-V10-00-33
1293 Initialize G4ITStepManager in G4DNAChem 144 Initialize G4ITStepManager in G4DNAChemistryManager
1294 145
1295 17-09-2014 MK, tag emdna-V10-00-32 146 17-09-2014 MK, tag emdna-V10-00-32
1296 Add G4ITStepManager + messenger 147 Add G4ITStepManager + messenger
1297 Tag before architecture change 148 Tag before architecture change
1298 149
1299 12-07-2014 SI, tag emdna-V10-00-31 150 12-07-2014 SI, tag emdna-V10-00-31
1300 Removed obsolete class for electr 151 Removed obsolete class for electron excitation
1301 152
1302 27-06-2014 GCosmo, tag emdna-V10-00-30 153 27-06-2014 GCosmo, tag emdna-V10-00-30
1303 - Get rid of obsolete 'register' keywor 154 - Get rid of obsolete 'register' keyword in code.
1304 155
1305 05-06-2014 SI, tag emdna-V10-00-29 156 05-06-2014 SI, tag emdna-V10-00-29
1306 - added include of <deque> in G4DNAMill 157 - added include of <deque> in G4DNAMillerGreenExcitationModel.hh
1307 - updated G4DNAIonisation and G4D << 158 - updated G4DNAIonisation and G4DNARuddIonisationExtendModel for
1308 G4GenericIon usage 159 G4GenericIon usage
1309 - requires G4EMLOW6.39 160 - requires G4EMLOW6.39
1310 161
1311 04-06-2014 MK, tag emdna-V10-00-28 162 04-06-2014 MK, tag emdna-V10-00-28
1312 Remove directory management/include/imp 163 Remove directory management/include/impl
1313 Prepare for release 164 Prepare for release
1314 165
1315 04-06-2014 MK, tag emdna-V10-00-27 166 04-06-2014 MK, tag emdna-V10-00-27
1316 Resolve several defects pointed o 167 Resolve several defects pointed out by coverity
1317 Add interface G4ITTimeStepper 168 Add interface G4ITTimeStepper
1318 Avoid usage of molecule iterators 169 Avoid usage of molecule iterators as pointers
1319 170
1320 03-06-2014 SI, tag emdna-V10-00-26 171 03-06-2014 SI, tag emdna-V10-00-26
1321 Switched to DNAion for Si in 172 Switched to DNAion for Si in G4DNAGenericIonsManager
1322 173
1323 28-05-2014 VI, SI tag emdna-V10-00-25 174 28-05-2014 VI, SI tag emdna-V10-00-25
1324 Added G4DNABornAngle and G4DN 175 Added G4DNABornAngle and G4DNARuddAngle generators;
1325 Ionisation models switch to u 176 Ionisation models switch to use angular generator
1326 interface 177 interface
1327 178
1328 12.05.2014 MK, tag emdna-V10-00-24 179 12.05.2014 MK, tag emdna-V10-00-24
1329 Try to remove warnings 4 180 Try to remove warnings 4
1330 181
1331 12.05.2014 MK, tag emdna-V10-00-23 182 12.05.2014 MK, tag emdna-V10-00-23
1332 Try to remove warnings 3 183 Try to remove warnings 3
1333 184
1334 12.05.2014 MK, tag emdna-V10-00-22 185 12.05.2014 MK, tag emdna-V10-00-22
1335 Try to remove warnings 2 186 Try to remove warnings 2
1336 187
1337 12.05.2014 MK, tag emdna-V10-00-21 188 12.05.2014 MK, tag emdna-V10-00-21
1338 Try to remove warnings 189 Try to remove warnings
1339 190
1340 09.05.2014 S. Incerti, tag emdna-V10-00-20 191 09.05.2014 S. Incerti, tag emdna-V10-00-20
1341 Added Si to G4DNARuddIonisationEx << 192 Added Si to G4DNARuddIonisationExtendedModel
1342 on behalf of Z. Francis 193 on behalf of Z. Francis
1343 G4EMLOW6.38 needed 194 G4EMLOW6.38 needed
1344 195
1345 07-04-2014 SI tag emdna-V10-00-19 196 07-04-2014 SI tag emdna-V10-00-19
1346 Changed faster method interpolation in 197 Changed faster method interpolation in
1347 G4DNABornIonisationModel << 198 G4DNABornIonisationModel
1348 199
1349 04-04-2014 G.Cosmo tag emdna-V10-00-1 200 04-04-2014 G.Cosmo tag emdna-V10-00-18
1350 Removed problematic #define in G4TrackS 201 Removed problematic #define in G4TrackState.hh causing errors on
1351 Windows for overriding of system keywor 202 Windows for overriding of system keyword 'Handle'...
1352 Corrected order of inclusion of some he 203 Corrected order of inclusion of some headers and use of <>/"".
1353 204
1354 04-04-2014 MK tag emdna-V10-00-17 205 04-04-2014 MK tag emdna-V10-00-17
1355 Try to solve warnings when G4VERBOSE is 206 Try to solve warnings when G4VERBOSE is off
1356 207
1357 02-04-2014 MK tag emdna-V10 208 02-04-2014 MK tag emdna-V10-00-16
1358 G4ITSafetyHelper: Force usage of G4Path 209 G4ITSafetyHelper: Force usage of G4PathFinder for now
1359 210
1360 02-04-2014 MK tag emdna-V10 211 02-04-2014 MK tag emdna-V10-00-15
1361 Add preprocessor flags on files in dev 212 Add preprocessor flags on files in dev to prevent build errors with gmake
1362 213
1363 02-04-2014 MK tag emdna-V10 214 02-04-2014 MK tag emdna-V10-00-14
1364 - on mac: template parameter declared a 215 - on mac: template parameter declared as a friend class is supported only with c++11 which causes a warning
1365 -> this part is withdrawn for now 216 -> this part is withdrawn for now
1366 217
1367 02-04-2014 MK tag emdna-V10 218 02-04-2014 MK tag emdna-V10-00-13
1368 - version 2 : try fixing the build erro 219 - version 2 : try fixing the build error on mac
1369 220
1370 02-04-2014 MK tag emdna-V10 221 02-04-2014 MK tag emdna-V10-00-12
1371 - version 1 : try to fix build errors a 222 - version 1 : try to fix build errors and warnings on mac
1372 223
1373 02-04-2014 MK tag emdna-V10 224 02-04-2014 MK tag emdna-V10-00-11
1374 - try to fix build error on windows pla 225 - try to fix build error on windows platform - 3
1375 (G4MemStat & G4MolecularConfiguration) 226 (G4MemStat & G4MolecularConfiguration)
1376 227
1377 02-04-2014 MK tag emdna-V10 228 02-04-2014 MK tag emdna-V10-00-10
1378 - try to fix build error on windows pla 229 - try to fix build error on windows platform - 2
1379 (problem coming from having as a friend 230 (problem coming from having as a friend class a template argument)
1380 231
1381 02-04-2014 MK tag emdna-V10 232 02-04-2014 MK tag emdna-V10-00-09
1382 - try to fix build error on windows pla << 233 - try to fix build error on windows platform
1383 234
1384 01-04-2014 MK tag emdna-V10 235 01-04-2014 MK tag emdna-V10-00-08
1385 - G4DNAChemistryManager.cc: remove a G4 236 - G4DNAChemistryManager.cc: remove a G4cout in destructor causing a crash in test60
1386 - G4TrackState.hh: change 'typename' to 237 - G4TrackState.hh: change 'typename' to 'class' in template argument of typewrapper
1387 238
1388 01-04-2014 MK tag emdna-V10 239 01-04-2014 MK tag emdna-V10-00-07
1389 - reset CMakeLists.txt 240 - reset CMakeLists.txt
1390 241
1391 01-04-2014 MK tag emdna-V10 242 01-04-2014 MK tag emdna-V10-00-06
1392 - update chemistry 243 - update chemistry
1393 244
1394 01-04-2014 SI tag emdna-V10-00-05 245 01-04-2014 SI tag emdna-V10-00-05
1395 - Modified calculation of secondary kin 246 - Modified calculation of secondary kinetic for fast code
1396 247
1397 27-03-2014 G.Cosmo tag emdna-V10-00-04 248 27-03-2014 G.Cosmo tag emdna-V10-00-04
1398 - Corrected inclusion order of headers 249 - Corrected inclusion order of headers and forward declations
1399 in G4MolecularConfiguration. 250 in G4MolecularConfiguration.
1400 - Corrected typo in DLL import flag in 251 - Corrected typo in DLL import flag in G4DNAWaterDissociationDisplacer.hh.
1401 252
1402 25-03-2014 VS, SI tag emdna-V10-00-03 253 25-03-2014 VS, SI tag emdna-V10-00-03
1403 - Added several clear() to vectors for 254 - Added several clear() to vectors for MT
1404 255
1405 17-03-2014 SI tag emdna-V10-00-02 256 17-03-2014 SI tag emdna-V10-00-02
1406 - Modified G4DNAChampionElasticModel.cc << 257 - Modified G4DNAChampionElasticModel.cc to read
1407 high precision diff. cumulated 258 high precision diff. cumulated cross section
1408 to be used with G4EMLOW6.36 259 to be used with G4EMLOW6.36
1409 260
1410 12-12-2013 M.K tag emdna-V10-00-01 261 12-12-2013 M.K tag emdna-V10-00-01
1411 - G4DNAMolecularMaterial: Remove unused 262 - G4DNAMolecularMaterial: Remove unused variable
1412 263
1413 12-12-2013 M.K tag emdna-V10-00-00 264 12-12-2013 M.K tag emdna-V10-00-00
1414 - G4DNAMolecularMaterial is modified to << 265 - G4DNAMolecularMaterial is modified to prevent segmentation fault in case
1415 a model is not created at initialisatio 266 a model is not created at initialisation time
1416 267
1417 21-11-2013 V.I. tag emdna-V09-06-22 268 21-11-2013 V.I. tag emdna-V09-06-22
1418 - G4ITStepProcessor2 - removed ob 269 - G4ITStepProcessor2 - removed obsolete unused header
1419 270
1420 01-11-2013 M.K tag emdna-V09-06-21 271 01-11-2013 M.K tag emdna-V09-06-21
1421 - Correct incorrect singleton che 272 - Correct incorrect singleton check introduced in previous tag
1422 273
1423 01-11-2013 M.K tag emdna-V09-06-20 274 01-11-2013 M.K tag emdna-V09-06-20
1424 - Prepare for release bis 275 - Prepare for release bis
1425 276
1426 01-11-2013 M.K tag emdna-V09-06-19 277 01-11-2013 M.K tag emdna-V09-06-19
1427 - Prepare for release 278 - Prepare for release
1428 279
1429 10-10-2013 M.K. tag emdna-V09-06-18 280 10-10-2013 M.K. tag emdna-V09-06-18
1430 - Remove G4VERBOSE testing in G4D 281 - Remove G4VERBOSE testing in G4DNABrownianTransportation::BuildPhysicsTable
1431 282
1432 06-10-2013 M.K. tag emdna-V09-06-17 283 06-10-2013 M.K. tag emdna-V09-06-17
1433 - Same as before once again 284 - Same as before once again
1434 285
1435 03-10-2013 M.K. tag emdna-V09-06-16 286 03-10-2013 M.K. tag emdna-V09-06-16
1436 - Same as before 287 - Same as before
1437 288
1438 03-10-2013 M.K. tag emdna-V09-06-15 289 03-10-2013 M.K. tag emdna-V09-06-15
1439 - Improve MT compatibility 290 - Improve MT compatibility
1440 - Enhance G4DNAChemistryManager to be t << 291 - Enhance G4DNAChemistryManager to be the main interface used
1441 by the user - stage 1 292 by the user - stage 1
1442 293
1443 14-09-2013 M.Asai tag emdna-V09-06-14 294 14-09-2013 M.Asai tag emdna-V09-06-14
1444 G4VProcess::SubtractNumberOfInter 295 G4VProcess::SubtractNumberOfInteractionLengthLeft() is no longer
1445 a virtual methood since v9.6 and 296 a virtual methood since v9.6 and thus it must not be overwritten
1446 with virtual keyword in G4VITProc 297 with virtual keyword in G4VITProcess.
1447 298
1448 12-09-2013 M.K. tag emdna-V09-06-13 299 12-09-2013 M.K. tag emdna-V09-06-13
1449 Correction of an inadvertent modificati 300 Correction of an inadvertent modification introduced in previous tag
1450 301
1451 12-09-2013 M.K. tag emdna-V09-06-12 302 12-09-2013 M.K. tag emdna-V09-06-12
1452 Correct bound checks in G4ITManager.icc 303 Correct bound checks in G4ITManager.icc
1453 304
1454 16-08-2013 S.I. tag emdna-V09-06-11 305 16-08-2013 S.I. tag emdna-V09-06-11
1455 Adapted G4DNAGenericIonsManager to use 306 Adapted G4DNAGenericIonsManager to use of G4DNAIons
1456 307
1457 16-08-2013 S.I. tag emdna-V09-06-10 308 16-08-2013 S.I. tag emdna-V09-06-10
1458 Added G4DNAIons 309 Added G4DNAIons
1459 310
1460 25-06-2013 M.K. tag emdna-V09-06-09 311 25-06-2013 M.K. tag emdna-V09-06-09
1461 G4MoleculeID: Rectify initialization 312 G4MoleculeID: Rectify initialization
1462 G4MoleculeCounter: Automatic switch bet << 313 G4MoleculeCounter: Automatic switch between unique_ptr or
1463 auto_ptr according to c++ std version 314 auto_ptr according to c++ std version
1464 315
1465 11-06-2013 G.Cosmo tag emdna-V09-06- 316 11-06-2013 G.Cosmo tag emdna-V09-06-08
1466 Corrected static initialisation i 317 Corrected static initialisation in G4VMolecularDecayDisplacer
1467 for problem accidentally introduc 318 for problem accidentally introduced in previous tag.
1468 319
1469 11-06-2013 G.Cosmo tag emdna-V09-06- 320 11-06-2013 G.Cosmo tag emdna-V09-06-07
1470 Cleanup from automatic changes fo 321 Cleanup from automatic changes for MT in classes G4Molecule,
1471 G4VMolecularDecayDisplacer, G4IT, 322 G4VMolecularDecayDisplacer, G4IT, G4ITModelProcessor, G4VITProcess,
1472 G4ITTransportation, G4DNAChemistr 323 G4ITTransportation, G4DNAChemistryManager, and porting MT
1473 compilation on Windows. 324 compilation on Windows.
1474 325
1475 06-06-2013 S.I. tag emdna-V09-06- 326 06-06-2013 S.I. tag emdna-V09-06-06
1476 Updated G4DNABornIonisationModel 327 Updated G4DNABornIonisationModel for speedup option
1477 Requires G4EMLOW version 6.33 328 Requires G4EMLOW version 6.33
1478 329
1479 25-05-2013 M.K. tag emdna-V09-06- 330 25-05-2013 M.K. tag emdna-V09-06-05
1480 *Fix warning compilation in G4KDM 331 *Fix warning compilation in G4KDMap for specific gcc version
1481 332
1482 24-05-2013 M.K. tag emdna-V09-06- 333 24-05-2013 M.K. tag emdna-V09-06-04
1483 * Track state class updated to fi << 334 * Track state class updated to fix compilation errors on mac
1484 but still not in usage 335 but still not in usage
1485 336
1486 23-05-2013 M.K. tag emdna-V09-06- 337 23-05-2013 M.K. tag emdna-V09-06-03
1487 * G4KDMap : try fix error on std: 338 * G4KDMap : try fix error on std:ceil call on windows
1488 339
1489 23-V09-06-03-05-2013 M.K. tag emd 340 23-V09-06-03-05-2013 M.K. tag emdna-V09-06-02
1490 * G4KDMap : used deque::iterator 341 * G4KDMap : used deque::iterator
1491 342
1492 343
1493 22-05-2013 M.K. tag emdna-V09-06- 344 22-05-2013 M.K. tag emdna-V09-06-01
1494 * Correct warning from G4KDTree.cc 345 * Correct warning from G4KDTree.cc
1495 * G4KDMap : pop out elements from map 346 * G4KDMap : pop out elements from map
1496 347
1497 22-05-2013 M.K. tag emdna-V09-06-00 348 22-05-2013 M.K. tag emdna-V09-06-00
1498 * !!! MT !!!! Promoted to thread-global << 349 * !!! MT !!!! Promoted to thread-global storage :
1499 --> G4DNAGenericIonManager << 350 --> G4DNAGenericIonManager
1500 --> G4DNAMolecularMaterial 351 --> G4DNAMolecularMaterial
1501 --> G4DNAMolecularReactionTable 352 --> G4DNAMolecularReactionTable
1502 * G4KDMap added 353 * G4KDMap added
1503 * G4DNASmoluchowskiReactionModel : exce 354 * G4DNASmoluchowskiReactionModel : exception description enhanced
1504 * G4ITTrackingInteractivity : "Initiali << 355 * G4ITTrackingInteractivity : "Initialize()" method added for simplify
1505 initialization of daughter classes << 356 intialization of daughter classes
1506 * G4DNAChemistryManager : AddEmptyLineI << 357 * G4DNAChemistryManager : AddEmptyLineInOuputFile method added
1507 358
1508 12-11-2012 M.K tag emdna-V09-05- 359 12-11-2012 M.K tag emdna-V09-05-35
1509 Remove unnecessary abort() and ex 360 Remove unnecessary abort() and exit(-1) previously introduced to avoid
1510 coverity warnings (rev 64993) 361 coverity warnings (rev 64993)
1511 362
1512 06-11-2012 G.Cosmo tag emdna-V09 363 06-11-2012 G.Cosmo tag emdna-V09-05-34
1513 Minor fixes for porting on AIX; m 364 Minor fixes for porting on AIX; mainly on use of const signature
1514 for objects in maps... 365 for objects in maps...
1515 366
1516 04-11-2012 M.K. tag emdna-V09-05-33 367 04-11-2012 M.K. tag emdna-V09-05-33
1517 G4IT : transform G4ITTrackingInfo 368 G4IT : transform G4ITTrackingInformation pointer to object (rev 64715)
1518 G4ITTrackingManager : get rid of 369 G4ITTrackingManager : get rid of attribute "fVerboseLevel" (rev 64716)
1519 G4ITStepProcessor.cc : correct co 370 G4ITStepProcessor.cc : correct coverity warnings in copy constructor (not used) (rev 64717)
1520 G4ITTransportationManager.hh : pu 371 G4ITTransportationManager.hh : put default constructor as private (rev 64718)
1521 G4VITModel.cc : rename variables 372 G4VITModel.cc : rename variables in copy constructor and assignment operator (------)
1522 G4MolecularDecayChannel.cc : adap 373 G4MolecularDecayChannel.cc : adapt copy constructor to avoid coverity warnings (rev 64719)
1523 G4MoleculeCounter.cc : get rid of 374 G4MoleculeCounter.cc : get rid of duplicated layout (------)
1524 G4DNAMolecularStepByStepModel : a 375 G4DNAMolecularStepByStepModel : add an exception in the assignment operator (rev 64720)
1525 G4ITTrackingManager.hh : remove r 376 G4ITTrackingManager.hh : remove remainders of fVerboseLevel (rev 64722)
1526 Ionisation Models (Born, Rudd, Ru 377 Ionisation Models (Born, Rudd, RuddExtended) :
1527 set fAtomDeexcitation = 0 (re 378 set fAtomDeexcitation = 0 (rev 64723)
1528 add "else" before "if" statem 379 add "else" before "if" statements and
1529 add variables to avoid ma 380 add variables to avoid many checks on particleDefinition. (rev 64724)
1530 dna.files : update files (rev 647 381 dna.files : update files (rev 64725)
1531 382
1532 03-11-2012 S.I. tag emdna-V09-05-32 383 03-11-2012 S.I. tag emdna-V09-05-32
1533 Switched to usage of SetEmModel a 384 Switched to usage of SetEmModel and EmModel in all dna/processes
1534 classes 385 classes
1535 386
1536 24-10-2012 M.K tag emdna-V09 387 24-10-2012 M.K tag emdna-V09-05-31
1537 G4ITNavigator is updated to new i 388 G4ITNavigator is updated to new interface of ReplicaNavigation::ComputeStep
1538 (previously commented) 389 (previously commented)
1539 390
1540 23-10-2012 M.K tag emdna-V09 391 23-10-2012 M.K tag emdna-V09-05-30
1541 Add exception in G4DNASecondOrder 392 Add exception in G4DNASecondOrderReaction
1542 Add carriage return in G4DNASmolu 393 Add carriage return in G4DNASmoluchowskiReaction cc and hh
1543 394
1544 18-10-2012 M.K tag emdna-V09 395 18-10-2012 M.K tag emdna-V09-05-29
1545 Previous tag did not include hist 396 Previous tag did not include history changes
1546 397
1547 18-10-2012 M.K tag emdna-V09 398 18-10-2012 M.K tag emdna-V09-05-28
1548 Remove warning 399 Remove warning
1549 400
1550 17-10-2012 M.K tag emdna-V09 401 17-10-2012 M.K tag emdna-V09-05-27
1551 Correct a typo from previous tag 402 Correct a typo from previous tag
1552 403
1553 17-10-2012 M.K tag emdna-V09 404 17-10-2012 M.K tag emdna-V09-05-26
1554 Correct information in headers 405 Correct information in headers
1555 Rename G4DNADiffustionControlledM 406 Rename G4DNADiffustionControlledModel to G4DNASmoluchowskiReactionModel
1556 G4ITNavigator updated to new inte 407 G4ITNavigator updated to new interface of ReplicaNavigation::ComputeStep.
1557 408
1558 01-10-2012 SI, P.Pater tag emdna-V09 409 01-10-2012 SI, P.Pater tag emdna-V09-05-25
1559 Force kinetic energy to zero for 410 Force kinetic energy to zero for real killings in models.
1560 411
1561 12-07-2012 G.Cosmo tag emdna-V09 412 12-07-2012 G.Cosmo tag emdna-V09-05-24
1562 Explicitly use inclusion of heade 413 Explicitly use inclusion of headers for system of units and physical
1563 constants, in plan to remove impl 414 constants, in plan to remove implicit inclusion from globals.hh.
1564 415
1565 11.07.2012 M.K tag emdna-V09 416 11.07.2012 M.K tag emdna-V09-05-23
1566 Correct warnings introduce in previous 417 Correct warnings introduce in previous tag
1567 418
1568 11.07.2012 M.K tag emdna-V09 419 11.07.2012 M.K tag emdna-V09-05-22
1569 Tag to be proposed 420 Tag to be proposed
1570 421
1571 25.06.2012 M.K tag emdna-V09-05-21 422 25.06.2012 M.K tag emdna-V09-05-21
1572 Fix semantic warning related to f 423 Fix semantic warning related to forward declaration of G4ITNavigator_Lock
1573 Modify molecule's name 424 Modify molecule's name
1574 << 425
1575 21.06.2012 S.I tag emdna-V09-05-20 426 21.06.2012 S.I tag emdna-V09-05-20
1576 Update of electron elastic scatte << 427 Update of electron elastic scattering low limit
1577 428
1578 09.06.2012 M.K tag emdna-V09-05-19 429 09.06.2012 M.K tag emdna-V09-05-19
1579 Fixed shadowing 430 Fixed shadowing
1580 431
1581 04.06.2012 M.K tag emdna-V09-05-18 432 04.06.2012 M.K tag emdna-V09-05-18
1582 Add G4ITTrackingInteractivity + c 433 Add G4ITTrackingInteractivity + correct coverity warnings
1583 434
1584 24.05.2012 M.K tag emdna-V09-05-17 435 24.05.2012 M.K tag emdna-V09-05-17
1585 Remove unnecessary call of pow in 436 Remove unnecessary call of pow in G4DNASecondOrderReaction
1586 437
1587 23.05.2012 M.K tag emdna-V09-05-16 438 23.05.2012 M.K tag emdna-V09-05-16
1588 Add initialisation of G4ITTrackHo 439 Add initialisation of G4ITTrackHolder in copy constructor of
1589 G4ITStepManager 440 G4ITStepManager
1590 Prevent call of destructor of G4I 441 Prevent call of destructor of G4ITStepManager and
1591 G4DNAChemistryManager 442 G4DNAChemistryManager
1592 443
1593 23.05.2012 M.K tag emdna-V09-05-15 444 23.05.2012 M.K tag emdna-V09-05-15
1594 Display warning (only once) from 445 Display warning (only once) from G4DNAMolecularMaterial
1595 when one of its methods is called 446 when one of its methods is called using a material that is
1596 not defined as a molecule 447 not defined as a molecule
1597 448
1598 21.05.2012 M.K tag emdna-V09-05-14 449 21.05.2012 M.K tag emdna-V09-05-14
1599 Modify G4DNAMolecularMaterial 450 Modify G4DNAMolecularMaterial
1600 Modify G4DNADamages 451 Modify G4DNADamages
1601 Add G4DNASecondOrderReaction prot 452 Add G4DNASecondOrderReaction prototype
1602 Modify all models to use G4DNAMol 453 Modify all models to use G4DNAMolecularMaterial
1603 454
1604 14.05.2012 M.K tag emdna-V09-05-13 455 14.05.2012 M.K tag emdna-V09-05-13
1605 Add G4DNAMolecularMaterial 456 Add G4DNAMolecularMaterial
1606 Add G4DNADamages 457 Add G4DNADamages
1607 458
1608 10.05.2012 M.K tag emdna-V09-05-12 459 10.05.2012 M.K tag emdna-V09-05-12
1609 Add the possibility of calling G4 460 Add the possibility of calling G4ITStepManager::EndTracking()
1610 from UserReactionAction::EndProce 461 from UserReactionAction::EndProcessing()
1611 462
1612 08.05.2012 M.K tag emdna-V09-05-11 463 08.05.2012 M.K tag emdna-V09-05-11
1613 Use inverseErf from CLHEP 464 Use inverseErf from CLHEP
1614 465
1615 03.05.2012 M.K tag emdna-V09-05-10 466 03.05.2012 M.K tag emdna-V09-05-10
1616 Add erfc function for windows com 467 Add erfc function for windows compilator (VC++)
1617 468
1618 03.05.2012 M.K tag emdna-V09-05-09 469 03.05.2012 M.K tag emdna-V09-05-09
1619 Add an exception in molecular dec 470 Add an exception in molecular decay, in case no decay channel was proposed in input
1620 471
1621 03.05.2012 M.K tag emdna-V09-05-08 472 03.05.2012 M.K tag emdna-V09-05-08
1622 Add products of dissociative atta 473 Add products of dissociative attachments (as a molecular decay)
1623 Add new methods in G4ChemistryMan 474 Add new methods in G4ChemistryManager :
1624 - PushMolecule 475 - PushMolecule
1625 - PushMoleculeAtParentTimeAndPlac 476 - PushMoleculeAtParentTimeAndPlace
1626 Reset() at the end of G4ITStepMan 477 Reset() at the end of G4ITStepManager::Process()
1627 478
1628 30.03.2012 M.K tag emdna-V09-05-07 479 30.03.2012 M.K tag emdna-V09-05-07
1629 Same as emdna-V09-05-06 480 Same as emdna-V09-05-06
1630 481
1631 30.03.2012 M.K tag emdna-V09-05-06 482 30.03.2012 M.K tag emdna-V09-05-06
1632 1) Add separate navigator for syn 483 1) Add separate navigator for synchronous tracking
1633 New classes : 484 New classes :
1634 * G4ITTransportationManager 485 * G4ITTransportationManager
1635 * G4ITNavigator (just a small cha 486 * G4ITNavigator (just a small change from G4Navigator)
1636 2) A messenger for G4ITStepManage 487 2) A messenger for G4ITStepManager :
1637 * G4ITSteppingMessenger 488 * G4ITSteppingMessenger
1638 3) Solve bugs with normal and bro 489 3) Solve bugs with normal and brownian ITTransportation
1639 490
1640 14.03.2012 M.K tag emdna-V09-05-05 491 14.03.2012 M.K tag emdna-V09-05-05
1641 * int G4VITProcess::fProcessID 492 * int G4VITProcess::fProcessID
1642 int G4VITProcess::fNbProcess 493 int G4VITProcess::fNbProcess
1643 -> become size_t + related change 494 -> become size_t + related changes
1644 * when a poststep process propo 495 * when a poststep process proposes an IL < 0
1645 => considered as a time, and tran 496 => considered as a time, and transportation::computestep
1646 is used 497 is used
1647 498
1648 14.03.2012 M.K tag emdna-V09-05-04 499 14.03.2012 M.K tag emdna-V09-05-04
1649 Fix compilation warning 500 Fix compilation warning
1650 501
1651 14.03.2012 M.K tag emdna-V09-05-03 502 14.03.2012 M.K tag emdna-V09-05-03
1652 Improve the management of information i 503 Improve the management of information in G4ITStepProcessor
1653 Fix coverity warnings 504 Fix coverity warnings
1654 505
1655 18.01.2012 S.I. tag emdna-V09 506 18.01.2012 S.I. tag emdna-V09-05-02
1656 Removal of G4Water* classes in ut 507 Removal of G4Water* classes in utils
1657 508
1658 11.01.2012 M.K tag emdna-V09 509 11.01.2012 M.K tag emdna-V09-05-01
1659 Bug fix in G4DNAChemistryManager: 510 Bug fix in G4DNAChemistryManager::CreateSolvatedElectron
1660 concerning the final position of 511 concerning the final position of the solvated electron
1661 using Sanche thermalization 512 using Sanche thermalization
1662 513
1663 16.12.2011 S.I tag emdna-V09 514 16.12.2011 S.I tag emdna-V09-05-00
1664 Updated source of cross section f 515 Updated source of cross section file for elastic scattering
1665 516
1666 25.11.2011 M.K tag emdna-V09 517 25.11.2011 M.K tag emdna-V09-04-52
1667 Correct a typo in previous tag 518 Correct a typo in previous tag
1668 519
1669 25.11.2011 M.K tag emdna-V09 520 25.11.2011 M.K tag emdna-V09-04-51
1670 Place the reaction products at th 521 Place the reaction products at the reaction site
1671 rather than center of mass in DNA 522 rather than center of mass in DNAMolecularReaction
1672 523
1673 21.11.2011 M.K tag emdna-V09 524 21.11.2011 M.K tag emdna-V09-04-50
1674 Change the name of macros in AddC 525 Change the name of macros in AddClone_def.hh to
1675 avoid conflicts with ROOT. 526 avoid conflicts with ROOT.
1676 Add short class description (comm 527 Add short class description (comments added in the new files)
1677 in JavaDoc style for doxygen use. 528 in JavaDoc style for doxygen use.
1678 529
1679 21.11.2011 M.K tag emdna-V09 530 21.11.2011 M.K tag emdna-V09-04-49
1680 Correct a wrong condition in the 531 Correct a wrong condition in the step manager
1681 Avoid the call of Green brownian 532 Avoid the call of Green brownian bridge when
1682 the time step is equal to zero (b 533 the time step is equal to zero (bug)
1683 Give priority to G4Processes over 534 Give priority to G4Processes over reaction processes
1684 when the time steps returned by t 535 when the time steps returned by the time stepper
1685 and the processes are equal 536 and the processes are equal
1686 Improve verbose 537 Improve verbose
1687 538
1688 21.11.2011 M.K tag emdna-V09 539 21.11.2011 M.K tag emdna-V09-04-48
1689 Fix incoherent management of time 540 Fix incoherent management of time and secondaries in management/
1690 Avoid memory leak related to the 541 Avoid memory leak related to the management of ITs
1691 Correct verbose in new models & p 542 Correct verbose in new models & process
1692 543
1693 18.11.2011 M.K tag emdna-V09 544 18.11.2011 M.K tag emdna-V09-04-47
1694 Fix uninitialized boolean variabl << 545 Fix uninitialized boolean variable (fWriteFile)
1695 in G4DNAChemistryManager 546 in G4DNAChemistryManager
1696 547
1697 18.11.2011 M.K tag emdna-V09 548 18.11.2011 M.K tag emdna-V09-04-46
1698 Fix compilation error in G4TrackL 549 Fix compilation error in G4TrackList on macOs
1699 Clean G4DNAMolecularDecayDisplace 550 Clean G4DNAMolecularDecayDisplacer from comments
1700 Correct a typo in G4DNAChemistryM 551 Correct a typo in G4DNAChemistryManager (H20 -> H2O)
1701 552
1702 15.11.2011 G.Cosmo tag emdna-V09 553 15.11.2011 G.Cosmo tag emdna-V09-04-45
1703 Fixes to initialisation of static 554 Fixes to initialisation of static data in G4VMolecularDecayDisplacer
1704 and G4DNAMolecularDecayDisplacer, 555 and G4DNAMolecularDecayDisplacer, to allow generation of DLLs on
1705 Windows. 556 Windows.
1706 Fixed compilation warning on icc 557 Fixed compilation warning on icc compiler in
1707 G4MolecularDecayTable.cc 558 G4MolecularDecayTable.cc
1708 559
1709 10.11.2011 M.K. tag emdna-V09 560 10.11.2011 M.K. tag emdna-V09-04-44
1710 Fix a bug in G4DNATransformElectr 561 Fix a bug in G4DNATransformElectronModel
1711 562
1712 10.11.2011 M.K. tag emdna-V09 563 10.11.2011 M.K. tag emdna-V09-04-43
1713 Clean classes for release 564 Clean classes for release
1714 Add comment into source 565 Add comment into source
1715 Change name of some methods 566 Change name of some methods
1716 Transform two independent singlet 567 Transform two independent singleton pointers to auto_ptr
1717 in order to prevent the user from 568 in order to prevent the user from deleting those classes
1718 (ITStepMan + DNAChemMan) 569 (ITStepMan + DNAChemMan)
1719 570
1720 10.11.2011 M.K. tag emdna-V09 571 10.11.2011 M.K. tag emdna-V09-04-42
1721 For safety (at the time of static 572 For safety (at the time of static members destruction)
1722 change fgManager in MolConf into 573 change fgManager in MolConf into a pointer delete by
1723 the chemistryManager. 574 the chemistryManager.
1724 575
1725 09.11.2011 M.K. tag emdna-V09 576 09.11.2011 M.K. tag emdna-V09-04-41
1726 Add friend class G4TrackList_Boun 577 Add friend class G4TrackList_Boundary;
1727 in G4TrackListNode. 578 in G4TrackListNode.
1728 Simplify and improve the use of d 579 Simplify and improve the use of dnaChemMan
1729 Add more convenient methods in us 580 Add more convenient methods in userReactionAction
1730 581
1731 08.11.2011 M.K. tag emdna-V09 582 08.11.2011 M.K. tag emdna-V09-04-40
1732 Fix coverity warnings 583 Fix coverity warnings
1733 584
1734 07.11.2011 M.K. tag emdna-V09 585 07.11.2011 M.K. tag emdna-V09-04-39
1735 Add correct types/sub-types for D 586 Add correct types/sub-types for DNAElectronSolvatation
1736 DNAMolecularDecay, DNABrownianTra 587 DNAMolecularDecay, DNABrownianTransportation, ITTransp
1737 Add the possibility to link a dec 588 Add the possibility to link a decay time to a given
1738 electronic configuration while de 589 electronic configuration while declaring the decay
1739 scheme through : G4MoleculeDef::A 590 scheme through : G4MoleculeDef::AddeConfToExcitedState
1740 Clean classes for release 591 Clean classes for release
1741 592
1742 03.11.2011 M.K. tag emdna-V09 593 03.11.2011 M.K. tag emdna-V09-04-38
1743 Add dna libs in sources.cmake 594 Add dna libs in sources.cmake
1744 595
1745 03.11.2011 M.K. tag emdna-V09 596 03.11.2011 M.K. tag emdna-V09-04-37
1746 Add G4ITStepManager fVerbose 597 Add G4ITStepManager fVerbose
1747 Add dna includes in sources.cmake 598 Add dna includes in sources.cmake
1748 << 599
1749 01.11.2011 M.K. tag emdna-V09 600 01.11.2011 M.K. tag emdna-V09-04-36
1750 Remove warnings on G4ITModelProce 601 Remove warnings on G4ITModelProcessor,
1751 G4ITTransportation, G4TrackList o 602 G4ITTransportation, G4TrackList on Windows
1752 603
1753 01.11.2011 G.Cosmo 604 01.11.2011 G.Cosmo
1754 Renamed export flags for DLL buil 605 Renamed export flags for DLL builds to G4EM_ALLOC_EXPORT and
1755 updated GNUMakefiles to have it p 606 updated GNUMakefiles to have it properly defined.
1756 607
1757 31.10.2011 M.K tag emdna-V09-04-35 608 31.10.2011 M.K tag emdna-V09-04-35
1758 Remove obsolete G4Exception 609 Remove obsolete G4Exception
1759 Remove "friend class G4KDTree" in G4KDN 610 Remove "friend class G4KDTree" in G4KDNode
1760 Remove G4VITProcessor and all relatives << 611 Remove G4VITProcessor and all relatives
1761 Fix windows compilation errors & warnin 612 Fix windows compilation errors & warnings
1762 613
1763 28.10.2011 M.K tag emdna-V09-04-34 614 28.10.2011 M.K tag emdna-V09-04-34
1764 Remove __PRETTY_FUNCTION__ introd 615 Remove __PRETTY_FUNCTION__ introduce __Exception_Origin__
1765 Plus remove obsolete G4Exception 616 Plus remove obsolete G4Exception
1766 617
1767 28.10.2011 M.K tag emdna-V09-04-33 618 28.10.2011 M.K tag emdna-V09-04-33
1768 Displace G4DNAChemistryManager, G 619 Displace G4DNAChemistryManager, G4DNAMolecularReactionTable,
1769 G4VDNAReactionModel to utils 620 G4VDNAReactionModel to utils
1770 Displace G4DNAMoleculeEncouterSte 621 Displace G4DNAMoleculeEncouterStepper, G4DNAMoleculeReaction
1771 to models 622 to models
1772 623
1773 27.10.2011 M.K tag emdna-V09-04-32 624 27.10.2011 M.K tag emdna-V09-04-32
1774 Fix BornIonisation + the two RuddIoni 625 Fix BornIonisation + the two RuddIoni
1775 coverity errors. 626 coverity errors.
1776 627
1777 26.10.2011 M.K tag emdna-V09-04-31 628 26.10.2011 M.K tag emdna-V09-04-31
1778 change std::shared_ptr to CLHEP::shared << 629 change std::shared_ptr to CLHEP::shared_ptr
1779 630
1780 26.10.2011 M.K. tag emdna-V09-04-30 631 26.10.2011 M.K. tag emdna-V09-04-30
1781 Memory leak fixes 632 Memory leak fixes
1782 G4MolecularConfiguration::fManager adde 633 G4MolecularConfiguration::fManager added
1783 634
1784 26.10.2011 M.K. tag emdna-V09-04-29 635 26.10.2011 M.K. tag emdna-V09-04-29
1785 G4DNAIonisation : add models for C/N/O/ 636 G4DNAIonisation : add models for C/N/O/Fe
1786 Add electron solvatation process & mode 637 Add electron solvatation process & models
1787 Add chemical processes 638 Add chemical processes
1788 639
1789 21.10.2011 M.K. tag emdna-V09-04-28 640 21.10.2011 M.K. tag emdna-V09-04-28
1790 Same as emdna-V09-04-27 including model << 641 Same as emdna-V09-04-27 including models/ & processes/ from
1791 emdna-V09-04-24 642 emdna-V09-04-24
1792 << 643
1793 21.10.2011 M.K. tag emdna-V09-04-27 644 21.10.2011 M.K. tag emdna-V09-04-27
1794 CMake fixes from emdna-V09-04-24 645 CMake fixes from emdna-V09-04-24
1795 << 646
1796 21.10.2011 M.K. tag emdna-V09-04-26 647 21.10.2011 M.K. tag emdna-V09-04-26
1797 Bug fixes and new dev from the previous << 648 Bug fixes and new dev from the previous tag
1798 649
1799 21.10.2011 S. Incerti tag emdna-V09-04-25 650 21.10.2011 S. Incerti tag emdna-V09-04-25
1800 Extension of ionisation by HZE proposed 651 Extension of ionisation by HZE proposed by Z. Francis
1801 652
1802 20.10.2011 M.K. tag emdna-V09-04-24 653 20.10.2011 M.K. tag emdna-V09-04-24
1803 Bug fixes and new dev from the previous 654 Bug fixes and new dev from the previous tag
1804 << 655
1805 07.10.2011 M.K. tag emdna-V09-04-23 656 07.10.2011 M.K. tag emdna-V09-04-23
1806 First tag with "molecules" files << 657 First tag with "molecules" files
1807 << 658
1808 07.10.2011 M.K. tag emdna-V09-04-22 659 07.10.2011 M.K. tag emdna-V09-04-22
1809 Add molecules+management directory 660 Add molecules+management directory
1810 First tag with "management" files 661 First tag with "management" files
1811 662
1812 09.09.2011 G.Folger tag emdna-V09 663 09.09.2011 G.Folger tag emdna-V09-04-21
1813 utils/sources.cmake: remove refer << 664 utils/sources.cmake: remove reference to non-existant
1814 G4DNAMoleculeManager.cc << 665 G4DNAMoleculeManager.cc
1815 666
1816 05.09.2011 A. M. M. K., S. I., tag emdna-V09 667 05.09.2011 A. M. M. K., S. I., tag emdna-V09-04-20
1817 Updated sources.make and CMakeLis 668 Updated sources.make and CMakeLists.txt
1818 669
1819 30.08.2011 A. M. M. K., S. I., tag emdna-V09 670 30.08.2011 A. M. M. K., S. I., tag emdna-V09-04-19
1820 Reorganized whole architecture. 671 Reorganized whole architecture.
1821 672
1822 24.08.2011 A. Mantero, tag emdna-V09-04-18 673 24.08.2011 A. Mantero, tag emdna-V09-04-18
1823 Fixed a bug regarding energy depo 674 Fixed a bug regarding energy deposition (bindingEnergy=0
1824 if no deexcitation) 675 if no deexcitation)
1825 676
1826 22.08.2011 S. Incerti, tag emdna-V09-04-17 677 22.08.2011 S. Incerti, tag emdna-V09-04-17
1827 Changed code (em0006) numbering f 678 Changed code (em0006) numbering for G4Exception
1828 679
1829 19.08.2011 S. Incerti, tag emdna-V09-04-16 680 19.08.2011 S. Incerti, tag emdna-V09-04-16
1830 Switched to new G4Exception synta 681 Switched to new G4Exception syntax
1831 682
1832 04.08.2011 A. Mantero, tag emdna-V09-04-15 683 04.08.2011 A. Mantero, tag emdna-V09-04-15
1833 Added enhanced debug information 684 Added enhanced debug information in ionisation models
1834 685
1835 02.08.2011 S. Incerti, tag emdna-V09-04-14 686 02.08.2011 S. Incerti, tag emdna-V09-04-14
1836 Removed wrong pointer delete in G4DNARu 687 Removed wrong pointer delete in G4DNARuddIonisation*
1837 688
1838 28.07.2011 S. Incerti, tag emdna-V09-04-13 689 28.07.2011 S. Incerti, tag emdna-V09-04-13
1839 Removed obsolete information. 690 Removed obsolete information.
1840 691
1841 28.07.2011 S. Incerti, tag emdna-V09-04-12 692 28.07.2011 S. Incerti, tag emdna-V09-04-12
1842 Updated deexcitation initialization in 693 Updated deexcitation initialization in ionization models.
1843 694
1844 21.07.2011 A. Mantero, tag emdna-V09-04-11 695 21.07.2011 A. Mantero, tag emdna-V09-04-11
1845 Coverity warnings removal 696 Coverity warnings removal
1846 697
1847 11.07.2011 S.Incerti, tag emdna-V09-04-10 698 11.07.2011 S.Incerti, tag emdna-V09-04-10
1848 - Increased energy limits for 699 - Increased energy limits for
1849 G4DNAChargeIncrease 700 G4DNAChargeIncrease
1850 G4DNAChargeDecrease 701 G4DNAChargeDecrease
1851 G4DNADingfelderChargeIncreaseModel 702 G4DNADingfelderChargeIncreaseModel
1852 G4DNADingflederChargeDecreaseModel 703 G4DNADingflederChargeDecreaseModel
1853 in collaboration with Ziad F. 704 in collaboration with Ziad F.
1854 - This tag includes Alfonso's upgrade << 705 - This tag includes Alfonso's upgrade
1855 of ionisation classes for Auger e- 706 of ionisation classes for Auger e-
1856 707
1857 16.05.2011 A.Mantero, tag emdna-V09-04-09 708 16.05.2011 A.Mantero, tag emdna-V09-04-09
1858 Further compilation warnings removal 709 Further compilation warnings removal
1859 710
1860 16.05.2011 A.Mantero, tag emdna-V09-04-08 711 16.05.2011 A.Mantero, tag emdna-V09-04-08
1861 Compilation warnings removal 712 Compilation warnings removal
1862 713
1863 12.05.2011 A.Mantero, tag emdna-V09-04-07 714 12.05.2011 A.Mantero, tag emdna-V09-04-07
1864 added Atomic Deexcitation to Ionisation 715 added Atomic Deexcitation to Ionisation Models
1865 716
1866 04.05.2011 S. Incerti, tag emdna-V09-04-06 717 04.05.2011 S. Incerti, tag emdna-V09-04-06
1867 Fixed compilation error on icc in 718 Fixed compilation error on icc in
1868 G4DNADingfelderChargeIncreaseModel.cc. 719 G4DNADingfelderChargeIncreaseModel.cc.
1869 720
1870 03.05.2011 S. Incerti, tag emdna-V09-04-05 721 03.05.2011 S. Incerti, tag emdna-V09-04-05
1871 Changed process sub-type numberin 722 Changed process sub-type numbering.
1872 723
1873 30.04.2011 S. Incerti, tag emdna-V09-04-04 724 30.04.2011 S. Incerti, tag emdna-V09-04-04
1874 Fixed coverity warnings. 725 Fixed coverity warnings.
1875 726
1876 05.04.2011 S. Incerti, tag emdna-V09-04-03 727 05.04.2011 S. Incerti, tag emdna-V09-04-03
1877 Updated all models for handling o 728 Updated all models for handling of variable density.
1878 729
1879 17.03.2011 S. Incerti, tag emdna-V09-04-02 730 17.03.2011 S. Incerti, tag emdna-V09-04-02
1880 Addition of dependencies to confi 731 Addition of dependencies to configuration files.
1881 732
1882 17.03.2011 S. Incerti, tag emdna-V09-04-01 733 17.03.2011 S. Incerti, tag emdna-V09-04-01
1883 Addition of all files. 734 Addition of all files.
1884 735
1885 13.02.2011 S. Incerti, tag emdna-V09-04-00 736 13.02.2011 S. Incerti, tag emdna-V09-04-00
1886 Creation of dna sub-package in el 737 Creation of dna sub-package in electromagnetic category.