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Geant4/examples/extended/medical/dna/wholeNuclearDNA/src/SteppingAction.cc

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Diff markup

Differences between /examples/extended/medical/dna/wholeNuclearDNA/src/SteppingAction.cc (Version 11.3.0) and /examples/extended/medical/dna/wholeNuclearDNA/src/SteppingAction.cc (Version 9.0.p2)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 // This example is provided by the Geant4-DNA     
 27 // Any report or published results obtained us    
 28 // and the DNA geometry given in the Geom_DNA     
 29 // shall cite the following Geant4-DNA collabo    
 30 // [1] NIM B 298 (2013) 47-54                     
 31 // [2] Med. Phys. 37 (2010) 4692-4708             
 32 // The Geant4-DNA web site is available at htt    
 33 //                                                
 34 //....oooOO0OOooo........oooOO0OOooo........oo    
 35 /// \file SteppingAction.cc                       
 36 /// \brief Implementation of the SteppingActio    
 37                                                   
 38 #include "SteppingAction.hh"                      
 39                                                   
 40 // G4                                             
 41 #include "CommandLineParser.hh"                   
 42                                                   
 43 #include "G4AnalysisManager.hh"                   
 44                                                   
 45 #include <G4SystemOfUnits.hh>                     
 46 #include <G4Track.hh>                             
 47 #include <G4VProcess.hh>                          
 48 #include <globals.hh>                             
 49                                                   
 50 using namespace G4DNAPARSER;                      
 51                                                   
 52 //....oooOO0OOooo........oooOO0OOooo........oo    
 53                                                   
 54 SteppingAction::SteppingAction() : G4UserStepp    
 55                                                   
 56 //....oooOO0OOooo........oooOO0OOooo........oo    
 57                                                   
 58 SteppingAction::~SteppingAction() {}              
 59                                                   
 60 //....oooOO0OOooo........oooOO0OOooo........oo    
 61                                                   
 62 void SteppingAction::UserSteppingAction(const     
 63 {                                                 
 64   G4double flagParticle = 0.;                     
 65   G4double flagProcess = 0.;                      
 66   G4double flagVolume = 0.;                       
 67   G4double x, y, z, xp, yp, zp;                   
 68   G4double dE;                                    
 69                                                   
 70   dE = step->GetTotalEnergyDeposit() / eV;        
 71                                                   
 72   const G4String& particleName =                  
 73     step->GetTrack()->GetDynamicParticle()->Ge    
 74                                                   
 75   const G4String& processName = step->GetPostS    
 76                                                   
 77   const G4String& volumeName = step->GetPreSte    
 78                                                   
 79   if (particleName == "e-")                       
 80     flagParticle = 10;                            
 81   else if (particleName == "proton")              
 82     flagParticle = 20;                            
 83   else if (particleName == "hydrogen")            
 84     flagParticle = 30;                            
 85   else if (particleName == "alpha")               
 86     flagParticle = 40;                            
 87   else if (particleName == "alpha+")              
 88     flagParticle = 50;                            
 89   else if (particleName == "helium")              
 90     flagParticle = 60;                            
 91                                                   
 92   if (processName == "e-_G4DNAElastic")           
 93     flagProcess = 11;                             
 94   else if (processName == "e-_G4DNAExcitation"    
 95     flagProcess = 12;                             
 96   else if (processName == "e-_G4DNAIonisation"    
 97     flagProcess = 13;                             
 98   else if (processName == "e-_G4DNAAttachment"    
 99     flagProcess = 14;                             
100   else if (processName == "e-_G4DNAVibExcitati    
101     flagProcess = 15;                             
102   else if (processName == "eCapture")             
103     flagProcess = 16;                             
104   //  if (step->GetPostStepPoint()->GetProcess    
105   // ->GetProcessName()=="msc")        flagPro    
106                                                   
107   else if (processName == "proton_G4DNAExcitat    
108     flagProcess = 21;                             
109   else if (processName == "proton_G4DNAIonisat    
110     flagProcess = 22;                             
111   else if (processName == "proton_G4DNAChargeD    
112     flagProcess = 23;                             
113                                                   
114   else if (processName == "hydrogen_G4DNAExcit    
115     flagProcess = 31;                             
116   else if (processName == "hydrogen_G4DNAIonis    
117     flagProcess = 32;                             
118   else if (processName == "hydrogen_G4DNACharg    
119     flagProcess = 33;                             
120                                                   
121   else if (processName == "alpha_G4DNAExcitati    
122     flagProcess = 41;                             
123   else if (processName == "alpha_G4DNAIonisati    
124     flagProcess = 42;                             
125   else if (processName == "alpha_G4DNAChargeDe    
126     flagProcess = 43;                             
127                                                   
128   else if (processName == "alpha+_G4DNAExcitat    
129     flagProcess = 51;                             
130   else if (processName == "alpha+_G4DNAIonisat    
131     flagProcess = 52;                             
132   else if (processName == "alpha+_G4DNAChargeD    
133     flagProcess = 53;                             
134   else if (processName == "alpha+_G4DNAChargeI    
135     flagProcess = 54;                             
136                                                   
137   else if (processName == "helium_G4DNAExcitat    
138     flagProcess = 61;                             
139   else if (processName == "helium_G4DNAIonisat    
140     flagProcess = 62;                             
141   else if (processName == "helium_G4DNAChargeI    
142     flagProcess = 63;                             
143                                                   
144   // if (step->GetPreStepPoint()->GetProcessDe    
145   //  GetProcessName()=="hIoni")        flagPr    
146   // if (step->GetPreStepPoint()->GetProcessDe    
147   //  GetProcessName()=="eIoni")        flagPr    
148                                                   
149   if (volumeName == "physi sugar 2")              
150     flagVolume = 1;                               
151   else if (volumeName == "physi sugar 4")         
152     flagVolume = 2;                               
153                                                   
154   if (flagVolume != 0 && dE != 0) {               
155     x = step->GetPreStepPoint()->GetPosition()    
156     y = step->GetPreStepPoint()->GetPosition()    
157     z = step->GetPreStepPoint()->GetPosition()    
158     xp = step->GetPostStepPoint()->GetPosition    
159     yp = step->GetPostStepPoint()->GetPosition    
160     zp = step->GetPostStepPoint()->GetPosition    
161                                                   
162     // The lines below could be put upper to g    
163     // Added here for testing that all the ret    
164     // correctly working                          
165     CommandLineParser* parser = CommandLinePar    
166     Command* command(0);                          
167     if ((command = parser->GetCommandIfActive(    
168                                                   
169     // get analysis manager                       
170     G4AnalysisManager* analysisManager = G4Ana    
171                                                   
172     analysisManager->FillNtupleDColumn(0, flag    
173     analysisManager->FillNtupleDColumn(1, flag    
174     analysisManager->FillNtupleDColumn(2, flag    
175     analysisManager->FillNtupleDColumn(3, xp);    
176     analysisManager->FillNtupleDColumn(4, yp);    
177     analysisManager->FillNtupleDColumn(5, zp);    
178     analysisManager->FillNtupleDColumn(6, dE);    
179     analysisManager->FillNtupleDColumn(           
180       7, std::sqrt((x - xp) * (x - xp) + (y -     
181                                                   
182     analysisManager->AddNtupleRow();              
183   }                                               
184 }                                                 
185