Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/dna/wholeNuclearDNA/src/RunAction.cc

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Diff markup

Differences between /examples/extended/medical/dna/wholeNuclearDNA/src/RunAction.cc (Version 11.3.0) and /examples/extended/medical/dna/wholeNuclearDNA/src/RunAction.cc (Version 8.3.p2)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 // This example is provided by the Geant4-DNA     
 27 // Any report or published results obtained us    
 28 // shall cite the following Geant4-DNA collabo    
 29 // Med. Phys. 37 (2010) 4692-4708                 
 30 // The Geant4-DNA web site is available at htt    
 31 //                                                
 32 /// \file RunAction.cc                            
 33 /// \brief Implementation of the RunAction cla    
 34                                                   
 35 #include "RunAction.hh"                           
 36                                                   
 37 #include "CommandLineParser.hh"                   
 38                                                   
 39 #include "G4AnalysisManager.hh"                   
 40 #include "G4Run.hh"                               
 41 #include "G4RunManager.hh"                        
 42 #include "G4Threading.hh"                         
 43                                                   
 44 using namespace G4DNAPARSER;                      
 45                                                   
 46 void PrintNParticles(std::map<const G4Particle    
 47                                                   
 48 //....oooOO0OOooo........oooOO0OOooo........oo    
 49                                                   
 50 RunAction::RunAction() : G4UserRunAction(), fI    
 51                                                   
 52 //....oooOO0OOooo........oooOO0OOooo........oo    
 53                                                   
 54 RunAction::~RunAction() {}                        
 55                                                   
 56 //....oooOO0OOooo........oooOO0OOooo........oo    
 57                                                   
 58 void RunAction::BeginOfRunAction(const G4Run*     
 59 {                                                 
 60   // In this example, we considered that the s    
 61   // used for both master and worker threads.     
 62   // However, in case the run action is long,     
 63   // for better code review, this practice is     
 64   //                                              
 65   // Please note, in the example provided with    
 66   // this RunAction class were not used by the    
 67                                                   
 68   bool sequential =                               
 69     (G4RunManager::GetRunManager()->GetRunMana    
 70                                                   
 71   if (isMaster && sequential == false)            
 72   // WARNING : in sequential mode, isMaster ==    
 73   {                                               
 74     BeginMaster(run);                             
 75   }                                               
 76   else                                            
 77     BeginWorker(run);                             
 78 }                                                 
 79                                                   
 80 //....oooOO0OOooo........oooOO0OOooo........oo    
 81                                                   
 82 void RunAction::EndOfRunAction(const G4Run* ru    
 83 {                                                 
 84   bool sequential =                               
 85     (G4RunManager::GetRunManager()->GetRunMana    
 86                                                   
 87   if (isMaster && sequential == false) {          
 88     EndMaster(run);                               
 89   }                                               
 90   else {                                          
 91     EndWorker(run);                               
 92   }                                               
 93 }                                                 
 94                                                   
 95 //....oooOO0OOooo........oooOO0OOooo........oo    
 96                                                   
 97 void RunAction::BeginMaster(const G4Run* run)     
 98 {                                                 
 99   if (fDebug) {                                   
100     bool sequential =                             
101       (G4RunManager::GetRunManager()->GetRunMa    
102     G4cout << "===============================    
103     if (!sequential) G4cout << "==============    
104     PrintRunInfo(run);                            
105     G4cout << "===============================    
106   }                                               
107 }                                                 
108                                                   
109 //....oooOO0OOooo........oooOO0OOooo........oo    
110                                                   
111 void RunAction::BeginWorker(const G4Run* run)     
112 {                                                 
113   if (fDebug) {                                   
114     G4cout << "===============================    
115     G4cout << "================ RunAction::Beg    
116     PrintRunInfo(run);                            
117     G4cout << "===============================    
118   }                                               
119   if (fInitialized == false) InitializeWorker(    
120                                                   
121   CreateNtuple();                                 
122 }                                                 
123                                                   
124 //....oooOO0OOooo........oooOO0OOooo........oo    
125                                                   
126 void RunAction::EndMaster(const G4Run*) {}        
127                                                   
128 //....oooOO0OOooo........oooOO0OOooo........oo    
129                                                   
130 void RunAction::EndWorker(const G4Run* run)       
131 {                                                 
132   if (fDebug) {                                   
133     PrintRunInfo(run);                            
134   }                                               
135                                                   
136   G4int nofEvents = run->GetNumberOfEvent();      
137   if (nofEvents == 0) {                           
138     if (fDebug) {                                 
139       G4cout << "================ NO EVENTS TR    
140     }                                             
141     return;                                       
142   }                                               
143                                                   
144   ///////////////                                 
145   // Write Ntuple                                 
146   //                                              
147   WriteNtuple();                                  
148 }                                                 
149                                                   
150 //....oooOO0OOooo........oooOO0OOooo........oo    
151                                                   
152 void RunAction::InitializeWorker(const G4Run*)    
153 {                                                 
154   // Initialize worker here                       
155   // example: you want to retrieve pointers to    
156   fInitialized = true;                            
157 }                                                 
158                                                   
159 //....oooOO0OOooo........oooOO0OOooo........oo    
160                                                   
161 void RunAction::CreateNtuple()                    
162 {                                                 
163   // Book histograms, ntuple                      
164                                                   
165   // Create analysis manager                      
166                                                   
167   CommandLineParser* parser = CommandLineParse    
168   Command* command(0);                            
169   if ((command = parser->GetCommandIfActive("-    
170                                                   
171   G4cout << "##### Create analysis manager "      
172          << "  " << this << G4endl;               
173   G4AnalysisManager* analysisManager = G4Analy    
174   analysisManager->SetDefaultFileType("root");    
175   //  if(!analysisManager->IsActive()) {return    
176                                                   
177   G4cout << "Using " << analysisManager->GetTy    
178                                                   
179   // Create directories                           
180                                                   
181   // analysisManager->SetHistoDirectoryName("h    
182   // analysisManager->SetNtupleDirectoryName("    
183   analysisManager->SetVerboseLevel(1);            
184                                                   
185   // Open an output file                          
186   G4String fileName;                              
187   if (command->GetOption().empty() == false) {    
188     fileName = command->GetOption();              
189   }                                               
190   else {                                          
191     fileName = "wholeNuclearDNA";                 
192     //   fileName = command->GetDefaultOption(    
193   }                                               
194   analysisManager->OpenFile(fileName);            
195                                                   
196   // Creating ntuple                              
197   analysisManager->CreateNtuple("ntuple", "geo    
198   analysisManager->CreateNtupleDColumn("flagPa    
199   analysisManager->CreateNtupleDColumn("flagPr    
200   analysisManager->CreateNtupleDColumn("flagVo    
201   analysisManager->CreateNtupleDColumn("x");      
202   analysisManager->CreateNtupleDColumn("y");      
203   analysisManager->CreateNtupleDColumn("z");      
204   analysisManager->CreateNtupleDColumn("edep")    
205   analysisManager->CreateNtupleDColumn("stepLe    
206                                                   
207   analysisManager->FinishNtuple();                
208 }                                                 
209                                                   
210 //....oooOO0OOooo........oooOO0OOooo........oo    
211                                                   
212 void RunAction::WriteNtuple()                     
213 {                                                 
214   CommandLineParser* parser = CommandLineParse    
215   Command* commandLine(0);                        
216   if ((commandLine = parser->GetCommandIfActiv    
217                                                   
218   // print histogram statistics                   
219   //                                              
220   G4AnalysisManager* analysisManager = G4Analy    
221   //  if(!analysisManager->IsActive()) {return    
222                                                   
223   // save histograms                              
224   //                                              
225   analysisManager->Write();                       
226   analysisManager->CloseFile();                   
227   analysisManager->Clear();                       
228 }                                                 
229                                                   
230 //....oooOO0OOooo........oooOO0OOooo........oo    
231                                                   
232 void RunAction::PrintRunInfo(const G4Run* run)    
233 {                                                 
234   G4cout << "================ Run is = " << ru    
235   G4cout << "================ Run type is = "     
236          << G4endl;                               
237   G4cout << "================ Event processed     
238   G4cout << "================ Nevent = " << ru    
239 }                                                 
240 //....oooOO0OOooo........oooOO0OOooo........oo    
241