Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/dna/microdosimetry/History

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Diff markup

Differences between /examples/extended/medical/dna/microdosimetry/History (Version 11.3.0) and /examples/extended/medical/dna/microdosimetry/History (Version 10.3.p3)


  1 # Example microdosimetry History               <<   1 -------------------------------------------------------------------
                                                   >>   2 $Id: History 73136 2013-08-19 14:28:09Z sincerti $
                                                   >>   3 -------------------------------------------------------------------
                                                   >>   4 
                                                   >>   5      =========================================================
                                                   >>   6           Geant4 - Microdosimetry example
                                                   >>   7      =========================================================
  2                                                     8 
  3 See `CONTRIBUTING.rst` for details of **requir <<   9                        Package History file
  4 which **must** added in reverse chronological  <<  10                        --------------------
  5 be used as a substitute for writing good git c << 
  6                                                << 
  7 ## 2024-10-05 Sebastien Incerti (microdosimetr << 
  8 - updated README                               << 
  9                                                << 
 10 ## 2024-02-13 Sebastien Incerti (microdosimetr << 
 11 - simplification of example to demonstrate the << 
 12                                                << 
 13 ## 2024-02-03 Sebastien Incerti (microdosimetr << 
 14 - original content of example removed          << 
 15 - replaced by dnaphysics example, version dnap << 
 16                                                << 
 17 ## 2021-12-10 Ben Morgan (microdosimetry-V11-0 << 
 18 - Change to new Markdown History format        << 
 19                                                << 
 20 ---                                            << 
 21                                                << 
 22 # History entries prior to 11.0                << 
 23                                                << 
 24 07-11-2021 I. Hrivnacova - microdosimetry-V10- << 
 25 - Added analysis manager Clear() call instead  << 
 26   deleting in the end of run (removed on July  << 
 27                                                << 
 28 06-10-2021 I. Hrivnacova - microdosimetry-V10- << 
 29 - Migration to new G4AnalysisManager.hh header << 
 30   define the default output file type (root),  << 
 31   removed Analysis.hh.                         << 
 32                                                << 
 33 19-07-21 I. Hrivnacova - microdosimetry-V10-07 << 
 34 - Updated for changes in the analysis category << 
 35   removed deleting of the analysis manager,    << 
 36   as this is now done by the Geant4 kernel.    << 
 37                                                << 
 38 23-03-21 V.Ivanchenko - microdosimetry-V10-07- << 
 39 - updated PhysicsList for 11.0: use updated Se << 
 40                                                << 
 41 03-03-21 V.Ivanchenko - microdosimetry-V10-07- << 
 42 - updated PhysicsList for 11.0: removed thread << 
 43   use SetEmModel(..) for multiple scattering.  << 
 44                                                << 
 45 10-11-20 B. Morgan - microdosimetry-V10-06-00  << 
 46 - Migration to G4RunManagerFactory.            << 
 47                                                << 
 48 03-03-19 S. Incerti - microdosimetry-V10-05-00 << 
 49 - updated plot.C.                              << 
 50                                                << 
 51 22-07-18 S. Incerti - microdosimetry-V10-04-01 << 
 52 - removed obsolete RanecuEngine.               << 
 53                                                << 
 54 09-05-18 B.Morgan - microdosimetry-V10-04-00   << 
 55 - Include G4Types before use of G4MULTITHREADE << 
 56   compatibility with move to #defines over -D  << 
 57   symbols.                                     << 
 58                                                << 
 59 07-11-17 S. Incerti - microdosimetry-V10-03-08 << 
 60 - updated plot.C                               << 
 61                                                << 
 62 06-11-17 S. Incerti - microdosimetry-V10-03-07 << 
 63 - updated PL (manual approach of G4DNA activat << 
 64                                                << 
 65 11-10-17 S. Incerti - microdosimetry-V10-03-06 << 
 66 - added more flags for EM processes            << 
 67                                                << 
 68 02-10-17 S. Incerti - microdosimetry-V10-03-05 << 
 69 - added more flags for EM processes            << 
 70                                                << 
 71 17-08-17 S. Incerti - microdosimetry-V10-03-04 << 
 72 - fix to analysis manager call in SteppingActi << 
 73                                                << 
 74 16-08-17 S. Incerti - microdosimetry-V10-03-03 << 
 75 - adapted to same scheme as dnaphysics         << 
 76                                                << 
 77 23-02-17 I. Hrivnacova - microdosimetry-V10-03 << 
 78 - fixed compilation (G4UIQt.hh include)        << 
 79                                                << 
 80 31-12-16 S. Incerti - microdosimetry-V10-03-01 << 
 81 - fixed comlpilation                           << 
 82                                                << 
 83 30-12-16 S. Incerti - microdosimetry-V10-03-00 << 
 84 - cleanup and reordering of processes          << 
 85                                                    11 
 86 14-10-16 G.Folger - microdosimetry-V10-02-04       12 14-10-16 G.Folger - microdosimetry-V10-02-04
 87 - remove direct use of theParticleIterator, us     13 - remove direct use of theParticleIterator, use GetParticleTableIterator().
 88     fix required by clang39 on Linux and MAC       14     fix required by clang39 on Linux and MAC
 89                                                    15 
 90 07 July 2016 - S. Incerti - microdosimetry-V10     16 07 July 2016 - S. Incerti - microdosimetry-V10-02-03
 91 - updated README                                   17 - updated README
 92                                                    18 
 93 04 July 2016 - I. Hrivnacova - microdosimetry-     19 04 July 2016 - I. Hrivnacova - microdosimetry-V10-02-02
 94 - Fixes for Doxygen documentation                  20 - Fixes for Doxygen documentation
 95                                                    21 
 96 04 June 2016 - V.Ivanchenko - microdosimetry-V     22 04 June 2016 - V.Ivanchenko - microdosimetry-V10-02-01
 97 - Fix PhysicsList                                  23 - Fix PhysicsList
 98                                                    24 
 99 31 May 2016 - M. Karamitros - microdosimetry-V     25 31 May 2016 - M. Karamitros - microdosimetry-V10-02-00
100 - Increase cuts of G4ElectronCapture to 7.4 eV     26 - Increase cuts of G4ElectronCapture to 7.4 eV to remain compatible
101   with the energy validity of the Champion's e     27   with the energy validity of the Champion's elastic model
102                                                    28 
103 17 Sep 2015 - S. Incerti - microdosimetry-V10-     29 17 Sep 2015 - S. Incerti - microdosimetry-V10-01-00
104 - Applied coding guidelines                        30 - Applied coding guidelines
105                                                    31 
106 24 Nov 2014 - M. Karamitros - microdosimetry-V     32 24 Nov 2014 - M. Karamitros - microdosimetry-V10-00-08
107 - Retag before release                             33 - Retag before release
108                                                    34 
109 12 Nov 2014 - M. Karamitros - microdosimetry-V     35 12 Nov 2014 - M. Karamitros - microdosimetry-V10-00-07
110 - Add a ifdef G4UI_USE_QT to avoid compilation     36 - Add a ifdef G4UI_USE_QT to avoid compilation error on ctest
111 - Copy README to bin directory                     37 - Copy README to bin directory
112 - Only create the vis viewer in the main           38 - Only create the vis viewer in the main
113                                                    39 
114 10 Nov 2014 - M. Karamitros - microdosimetry-V     40 10 Nov 2014 - M. Karamitros - microdosimetry-V10-00-06
115 - Correct the check on the output file command     41 - Correct the check on the output file command line option
116                                                    42 
117 10 Nov 2014 - M. Karamitros - microdosimetry-V     43 10 Nov 2014 - M. Karamitros - microdosimetry-V10-00-05
118 - Following Laurent's development: add a tab i <<  44 - Following Laurent's development: add a tab in the Qt interface 
119 displaying the README                              45 displaying the README
120                                                    46 
121 10 Nov 2014 - M. Karamitros - microdosimetry-V     47 10 Nov 2014 - M. Karamitros - microdosimetry-V10-00-04
122 - CommandLine updated                              48 - CommandLine updated
123 - Default output file's name corrected             49 - Default output file's name corrected
124 - remove microdosmietry.mac                        50 - remove microdosmietry.mac
125                                                    51 
126 08 Nov 2014 - M.Karamitros - microdosimetry-V1     52 08 Nov 2014 - M.Karamitros - microdosimetry-V10-00-03
127 - Clean command line options                       53 - Clean command line options
128                                                    54 
129 06 Nov 2014 - M.Karamitros - microdosimetry-V1     55 06 Nov 2014 - M.Karamitros - microdosimetry-V10-00-02
130 - Check analysis manager is actived removed        56 - Check analysis manager is actived removed
131 - Select gui + vis from command line option    <<  57 - Select gui + vis from command line option 
132                                                    58 
133 23 Oct 2013 - V.Ivanchenko - microdosimetry-V1     59 23 Oct 2013 - V.Ivanchenko - microdosimetry-V10-00-01
134 - Fixed user actions and enter flexible number     60 - Fixed user actions and enter flexible number of threads
135                                                    61 
136 22 Oct 2013 - M. Karamitros - microdosimetry-V     62 22 Oct 2013 - M. Karamitros - microdosimetry-V10-00-00
137 - confusion : 09-06 -> 10-00 - change name of      63 - confusion : 09-06 -> 10-00 - change name of the tag
138                                                    64 
139 22 Oct 2013 - M. Karamitros - microdosimetry-V     65 22 Oct 2013 - M. Karamitros - microdosimetry-V09-06-12
140 - Update READMEs                                   66 - Update READMEs
141                                                    67 
142 22 Oct 2013 - M. Karamitros - microdosimetry-V     68 22 Oct 2013 - M. Karamitros - microdosimetry-V09-06-11
143 - src: Add missing base class initialization       69 - src: Add missing base class initialization
144                                                    70 
145 22 Oct 2013 - M. Karamitros - microdosimetry-V     71 22 Oct 2013 - M. Karamitros - microdosimetry-V09-06-10
146 - Migration to extended                            72 - Migration to extended
147 - Add missing virtuals, clean classes              73 - Add missing virtuals, clean classes
148 - Add .README                                      74 - Add .README
149 - microdosimetry.mac -> microdosimetry.in          75 - microdosimetry.mac -> microdosimetry.in
150 - CMakeLists.txt: improve configuration of mac     76 - CMakeLists.txt: improve configuration of mac files
151 - Add RunInitObserver class and make TrackingA     77 - Add RunInitObserver class and make TrackingAction dependent on it
152                                                    78 
153 3 Oct 2013 - S. Incerti - microdosimetry-V09-0     79 3 Oct 2013 - S. Incerti - microdosimetry-V09-06-09
154 - Updated CMakeLists.txt                           80 - Updated CMakeLists.txt
155                                                    81 
156 30 Sep 2013 - I. Hrivnacova - microdosimetry-V     82 30 Sep 2013 - I. Hrivnacova - microdosimetry-V09-06-08
157 - Updated for changes in analysis:                 83 - Updated for changes in analysis:
158   (removal of G4AnalysisManager::Create(isMast     84   (removal of G4AnalysisManager::Create(isMaster))
159                                                    85 
160 22 Aug 2013 - S. Incerti - microdosimetry-V09-     86 22 Aug 2013 - S. Incerti - microdosimetry-V09-06-07
161 - Updated README                                   87 - Updated README
162                                                    88 
163 19 Aug 2013 - S. Incerti - microdosimetry-V09-     89 19 Aug 2013 - S. Incerti - microdosimetry-V09-06-06
164 - Updated README                                   90 - Updated README
165                                                    91 
166 30 July 2013 - A.Dotti - microdosimetry-V09-06     92 30 July 2013 - A.Dotti - microdosimetry-V09-06-05
167 - Fix compilation warnings from clang32            93 - Fix compilation warnings from clang32
168                                                    94 
169 7 June 2013 - M. Karamitros - microdosimetry-V     95 7 June 2013 - M. Karamitros - microdosimetry-V09-06-04
170 - Remove unnecessary output                        96 - Remove unnecessary output
171                                                    97 
172 7 June 2013 - M. Karamitros - microdosimetry-V     98 7 June 2013 - M. Karamitros - microdosimetry-V09-06-03
173 - Code clean up and comments added for beta re     99 - Code clean up and comments added for beta release
174                                                   100 
175 3 June 2013 - M. Karamitros - microdosimetry-V    101 3 June 2013 - M. Karamitros - microdosimetry-V09-06-02
176 - Fix initialization of sequential run            102 - Fix initialization of sequential run
177                                                   103 
178 10 Apr 2013 - M. Karamitros - microdosimetry-V    104 10 Apr 2013 - M. Karamitros - microdosimetry-V09-06-01
179 - Migration to MT                                 105 - Migration to MT
180                                                   106 
181 10 Apr 2013 - S. Incerti - microdosimetry-V09-    107 10 Apr 2013 - S. Incerti - microdosimetry-V09-06-00
182 - Updated msc model                               108 - Updated msc model
183                                                   109 
184 3 Nov 2012 - S.Incerti - microdosimetry-V09-05    110 3 Nov 2012 - S.Incerti - microdosimetry-V09-05-06
185 - Removed shadowing in SteppingAction             111 - Removed shadowing in SteppingAction
186 - Updated physics list for usage of SetEmModel    112 - Updated physics list for usage of SetEmModel() method
187                                                   113 
188 26 Oct 2012 - L.Pandola - microdosimetry-V09-0    114 26 Oct 2012 - L.Pandola - microdosimetry-V09-05-05
189 - Changed CMakeLists.txt to deal with VIS/UI      115 - Changed CMakeLists.txt to deal with VIS/UI
190                                                   116 
191 26 Oct 2012 - S.Incerti - microdosimetry-V09-0    117 26 Oct 2012 - S.Incerti - microdosimetry-V09-05-04
192 - Renamed executable                              118 - Renamed executable
193                                                   119 
194 12 Oct 2012 - G.Cosmo - microdosimetry-V09-05-    120 12 Oct 2012 - G.Cosmo - microdosimetry-V09-05-03
195 - Explicit inclusion of units and constants he    121 - Explicit inclusion of units and constants headers
196                                                   122 
197 1 Oct 2012 - V. Ivantchenko - microdosimetry-V    123 1 Oct 2012 - V. Ivantchenko - microdosimetry-V09-05-02
198 - G4ElectronCapture - clean up killing capture    124 - G4ElectronCapture - clean up killing captured electron
199                                                   125 
200 16 Aug 2012 - S. Incerti - microdosimetry-V09-    126 16 Aug 2012 - S. Incerti - microdosimetry-V09-05-01
201 - Switched to new analysis interface              127 - Switched to new analysis interface
202                                                   128 
203 10 Aug 2012 - S. Incerti - microdosimetry-V09-    129 10 Aug 2012 - S. Incerti - microdosimetry-V09-05-00
204 - Removed export=root option in HistoManager      130 - Removed export=root option in HistoManager
205                                                   131 
206 23 July 2012 - M. Karamitros -  microdosimetry    132 23 July 2012 - M. Karamitros -  microdosimetry-V09-04-07
207 - Added TrackingAction (count N secondaries cr    133 - Added TrackingAction (count N secondaries created in/outside
208   "target" region) + Modified related classes     134   "target" region) + Modified related classes (RunAct and main)
209                                                   135 
210 18 August 2011 - S. Incerti -  microdosimetry-    136 18 August 2011 - S. Incerti -  microdosimetry-V09-04-06
211 - Added scoring of msc                         << 137 - Added scoring of msc 
212                                                   138 
213 18 August 2011 - S. Incerti -  microdosimetry-    139 18 August 2011 - S. Incerti -  microdosimetry-V09-04-05
214 - Removed initStep test in SteppingAction         140 - Removed initStep test in SteppingAction
215                                                   141 
216 16 August 2011 - S. Incerti -  microdosimetry-    142 16 August 2011 - S. Incerti -  microdosimetry-V09-04-04
217 - Removed usage of system command                 143 - Removed usage of system command
218                                                   144 
219 27 May 2011 - S. Incerti -  microdosimetry-V09    145 27 May 2011 - S. Incerti -  microdosimetry-V09-04-03
220 - Switched back to ordered physics list           146 - Switched back to ordered physics list
221                                                   147 
222 20 May 2011 - S. Incerti -  microdosimetry-V09    148 20 May 2011 - S. Incerti -  microdosimetry-V09-04-02
223 - Switched to non-ordered physics list            149 - Switched to non-ordered physics list
224                                                   150 
225 02 April 2011 - S. Incerti -  microdosimetry-V    151 02 April 2011 - S. Incerti -  microdosimetry-V09-04-01
226 - Added new variables to histogram                152 - Added new variables to histogram
227                                                   153 
228 13 March 2011 - S. Incerti -  microdosimetry-V    154 13 March 2011 - S. Incerti -  microdosimetry-V09-04-00
229 - Switched to G4ionIonisation and 5 MeV proton    155 - Switched to G4ionIonisation and 5 MeV proton
230                                                   156 
231 18 November 2010 - J. Allison -  microdosimetr    157 18 November 2010 - J. Allison -  microdosimetry-V09-03-10
232 - Introduced G4UIExecutive.                       158 - Introduced G4UIExecutive.
233                                                   159 
234 12 November 2010 - S. Incerti -  microdosimetr    160 12 November 2010 - S. Incerti -  microdosimetry-V09-03-09
235 - Modified energy limit of Sanche vib excitati    161 - Modified energy limit of Sanche vib excitation for e-
236                                                   162 
237 09 November 2010 - M. Asai - microdosimetry-V0    163 09 November 2010 - M. Asai - microdosimetry-V09-03-08
238 - Fix AIDA file option.                           164 - Fix AIDA file option.
239                                                   165 
240 08 October 2010 - S. Incerti - microdosimetry-    166 08 October 2010 - S. Incerti - microdosimetry-V09-03-07
241 - added H excitation                              167 - added H excitation
242                                                   168 
243 06 October 2010 - S. Incerti - microdosimetry-    169 06 October 2010 - S. Incerti - microdosimetry-V09-03-06
244 - update for production of histograms with AID    170 - update for production of histograms with AIDA
245                                                   171 
246 13 September 2010 - S. Incerti - microdosimetr    172 13 September 2010 - S. Incerti - microdosimetry-V09-03-05
247 - added new G4DNA electron processes              173 - added new G4DNA electron processes
248 - updated SteppingAction and plot.C accordingl    174 - updated SteppingAction and plot.C accordingly
249                                                   175 
250 31 August 2010 - V.Ivanchenko - microdosimetry    176 31 August 2010 - V.Ivanchenko - microdosimetry-V09-03-04
251 - added electron capture process inside the ta    177 - added electron capture process inside the target
252                                                   178 
253 25 August 2010 - S. Incerti - microdosimetry-V    179 25 August 2010 - S. Incerti - microdosimetry-V09-03-03
254 - switched to G4DNABornExcitationModel for ele    180 - switched to G4DNABornExcitationModel for electrons
255                                                   181 
256 12 June 2010 - V.Ivanchenko    - microdosimetr    182 12 June 2010 - V.Ivanchenko    - microdosimetry-V09-03-02
257 - added target region and defined DNA physics     183 - added target region and defined DNA physics for this region
258                                                   184 
259 03 June 2010 - J.Perl    - microdosimetry-V09-    185 03 June 2010 - J.Perl    - microdosimetry-V09-03-01
260 - update vis usage                                186 - update vis usage
261                                                   187 
262 25 March 2010 - G.Folger    - microdosimetry-V    188 25 March 2010 - G.Folger    - microdosimetry-V09-03-00
263 - do not use G4UItcsh on windows                  189 - do not use G4UItcsh on windows
264                                                   190 
265 15 August 2009 - S. Incerti - microdosimetry-V    191 15 August 2009 - S. Incerti - microdosimetry-V09-02-04
266 - fixed type in GenericIonDefinition in Physic    192 - fixed type in GenericIonDefinition in PhysicsList.cc
267   (to be used with emlowen-V09-02-50 and above    193   (to be used with emlowen-V09-02-50 and above)
268                                                   194 
269 13 August 2009 - S. Incerti - microdosimetry-V    195 13 August 2009 - S. Incerti - microdosimetry-V09-02-03
270 - replaced H2O material by NIST G4_WATER       << 196 - replaced H2O material by NIST G4_WATER 
271   (to be used with emlowen-V09-02-50 and above << 197   (to be used with emlowen-V09-02-50 and above) 
272                                                   198 
273 10 August 2009 - S. Incerti - microdosimetry-V    199 10 August 2009 - S. Incerti - microdosimetry-V09-02-02
274 - added GenericIon definition to PhysicsList (    200 - added GenericIon definition to PhysicsList (required by rules of G4VUserPhysicsList)
275                                                   201 
276 29 April 2009 - S. Incerti - microdosimetry-V0    202 29 April 2009 - S. Incerti - microdosimetry-V09-02-01
277 - modified PhysicsList for migrated Geant4-DNA    203 - modified PhysicsList for migrated Geant4-DNA processes
278 - modified SteppingAction accordingly             204 - modified SteppingAction accordingly
279 - updated README                                  205 - updated README
280                                                   206 
281 27 June 2008 - S. Incerti - microdosimetry-V09    207 27 June 2008 - S. Incerti - microdosimetry-V09-01-04
282 - modified PhysicsList.cc and SteppingAction.c    208 - modified PhysicsList.cc and SteppingAction.cc to take into account
283 new G4CrossSectionElasticScreenedRutherfordLE     209 new G4CrossSectionElasticScreenedRutherfordLE and HE classes
284 (from emlowen-V09-01-21 only !)                   210 (from emlowen-V09-01-21 only !)
285 - removed G4CrossSectionExcitationEmfietzoglou    211 - removed G4CrossSectionExcitationEmfietzoglou.cc
286                                                   212 
287 20 June 2008 - S. Incerti - microdosimetry-V09    213 20 June 2008 - S. Incerti - microdosimetry-V09-01-03
288 - updated History                                 214 - updated History
289                                                   215 
290 10 June 2008 - S. Incerti - microdosimetry-V09    216 10 June 2008 - S. Incerti - microdosimetry-V09-01-02
291 - added G4CrossSectionExcitationEmfietzoglou.c    217 - added G4CrossSectionExcitationEmfietzoglou.cc with higher low energy limit (10 eV) than default (7.4 eV)
292 - added G4DNA process names in Physics list       218 - added G4DNA process names in Physics list
293 - removed useless G4DNAProcess.hh and G4DNAPro    219 - removed useless G4DNAProcess.hh and G4DNAProcess.icc files
294                                                   220 
295 06 June 2008 - S. Incerti - microdosimetry-V09    221 06 June 2008 - S. Incerti - microdosimetry-V09-01-01
296 - Package created.                                222 - Package created.