Geant4 Cross Reference

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Geant4/examples/extended/medical/dna/microdosimetry/History

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Diff markup

Differences between /examples/extended/medical/dna/microdosimetry/History (Version 11.3.0) and /examples/extended/medical/dna/microdosimetry/History (Version 10.1)


  1 # Example microdosimetry History               <<   1 -------------------------------------------------------------------
                                                   >>   2 $Id: History 73136 2013-08-19 14:28:09Z sincerti $
                                                   >>   3 -------------------------------------------------------------------
                                                   >>   4 
                                                   >>   5      =========================================================
                                                   >>   6           Geant4 - Microdosimetry example
                                                   >>   7      =========================================================
  2                                                     8 
  3 See `CONTRIBUTING.rst` for details of **requir <<   9                        Package History file
  4 which **must** added in reverse chronological  <<  10                        --------------------
  5 be used as a substitute for writing good git c << 
  6                                                << 
  7 ## 2024-10-05 Sebastien Incerti (microdosimetr << 
  8 - updated README                               << 
  9                                                << 
 10 ## 2024-02-13 Sebastien Incerti (microdosimetr << 
 11 - simplification of example to demonstrate the << 
 12                                                << 
 13 ## 2024-02-03 Sebastien Incerti (microdosimetr << 
 14 - original content of example removed          << 
 15 - replaced by dnaphysics example, version dnap << 
 16                                                << 
 17 ## 2021-12-10 Ben Morgan (microdosimetry-V11-0 << 
 18 - Change to new Markdown History format        << 
 19                                                << 
 20 ---                                            << 
 21                                                << 
 22 # History entries prior to 11.0                << 
 23                                                << 
 24 07-11-2021 I. Hrivnacova - microdosimetry-V10- << 
 25 - Added analysis manager Clear() call instead  << 
 26   deleting in the end of run (removed on July  << 
 27                                                << 
 28 06-10-2021 I. Hrivnacova - microdosimetry-V10- << 
 29 - Migration to new G4AnalysisManager.hh header << 
 30   define the default output file type (root),  << 
 31   removed Analysis.hh.                         << 
 32                                                << 
 33 19-07-21 I. Hrivnacova - microdosimetry-V10-07 << 
 34 - Updated for changes in the analysis category << 
 35   removed deleting of the analysis manager,    << 
 36   as this is now done by the Geant4 kernel.    << 
 37                                                << 
 38 23-03-21 V.Ivanchenko - microdosimetry-V10-07- << 
 39 - updated PhysicsList for 11.0: use updated Se << 
 40                                                << 
 41 03-03-21 V.Ivanchenko - microdosimetry-V10-07- << 
 42 - updated PhysicsList for 11.0: removed thread << 
 43   use SetEmModel(..) for multiple scattering.  << 
 44                                                << 
 45 10-11-20 B. Morgan - microdosimetry-V10-06-00  << 
 46 - Migration to G4RunManagerFactory.            << 
 47                                                << 
 48 03-03-19 S. Incerti - microdosimetry-V10-05-00 << 
 49 - updated plot.C.                              << 
 50                                                << 
 51 22-07-18 S. Incerti - microdosimetry-V10-04-01 << 
 52 - removed obsolete RanecuEngine.               << 
 53                                                << 
 54 09-05-18 B.Morgan - microdosimetry-V10-04-00   << 
 55 - Include G4Types before use of G4MULTITHREADE << 
 56   compatibility with move to #defines over -D  << 
 57   symbols.                                     << 
 58                                                << 
 59 07-11-17 S. Incerti - microdosimetry-V10-03-08 << 
 60 - updated plot.C                               << 
 61                                                << 
 62 06-11-17 S. Incerti - microdosimetry-V10-03-07 << 
 63 - updated PL (manual approach of G4DNA activat << 
 64                                                << 
 65 11-10-17 S. Incerti - microdosimetry-V10-03-06 << 
 66 - added more flags for EM processes            << 
 67                                                << 
 68 02-10-17 S. Incerti - microdosimetry-V10-03-05 << 
 69 - added more flags for EM processes            << 
 70                                                << 
 71 17-08-17 S. Incerti - microdosimetry-V10-03-04 << 
 72 - fix to analysis manager call in SteppingActi << 
 73                                                << 
 74 16-08-17 S. Incerti - microdosimetry-V10-03-03 << 
 75 - adapted to same scheme as dnaphysics         << 
 76                                                << 
 77 23-02-17 I. Hrivnacova - microdosimetry-V10-03 << 
 78 - fixed compilation (G4UIQt.hh include)        << 
 79                                                << 
 80 31-12-16 S. Incerti - microdosimetry-V10-03-01 << 
 81 - fixed comlpilation                           << 
 82                                                << 
 83 30-12-16 S. Incerti - microdosimetry-V10-03-00 << 
 84 - cleanup and reordering of processes          << 
 85                                                << 
 86 14-10-16 G.Folger - microdosimetry-V10-02-04   << 
 87 - remove direct use of theParticleIterator, us << 
 88     fix required by clang39 on Linux and MAC   << 
 89                                                << 
 90 07 July 2016 - S. Incerti - microdosimetry-V10 << 
 91 - updated README                               << 
 92                                                << 
 93 04 July 2016 - I. Hrivnacova - microdosimetry- << 
 94 - Fixes for Doxygen documentation              << 
 95                                                << 
 96 04 June 2016 - V.Ivanchenko - microdosimetry-V << 
 97 - Fix PhysicsList                              << 
 98                                                << 
 99 31 May 2016 - M. Karamitros - microdosimetry-V << 
100 - Increase cuts of G4ElectronCapture to 7.4 eV << 
101   with the energy validity of the Champion's e << 
102                                                << 
103 17 Sep 2015 - S. Incerti - microdosimetry-V10- << 
104 - Applied coding guidelines                    << 
105                                                    11 
106 24 Nov 2014 - M. Karamitros - microdosimetry-V     12 24 Nov 2014 - M. Karamitros - microdosimetry-V10-00-08
107 - Retag before release                             13 - Retag before release
108                                                    14 
109 12 Nov 2014 - M. Karamitros - microdosimetry-V     15 12 Nov 2014 - M. Karamitros - microdosimetry-V10-00-07
110 - Add a ifdef G4UI_USE_QT to avoid compilation     16 - Add a ifdef G4UI_USE_QT to avoid compilation error on ctest
111 - Copy README to bin directory                     17 - Copy README to bin directory
112 - Only create the vis viewer in the main           18 - Only create the vis viewer in the main
113                                                    19 
114 10 Nov 2014 - M. Karamitros - microdosimetry-V     20 10 Nov 2014 - M. Karamitros - microdosimetry-V10-00-06
115 - Correct the check on the output file command     21 - Correct the check on the output file command line option
116                                                    22 
117 10 Nov 2014 - M. Karamitros - microdosimetry-V     23 10 Nov 2014 - M. Karamitros - microdosimetry-V10-00-05
118 - Following Laurent's development: add a tab i <<  24 - Following Laurent's development: add a tab in the Qt interface 
119 displaying the README                              25 displaying the README
120                                                    26 
121 10 Nov 2014 - M. Karamitros - microdosimetry-V     27 10 Nov 2014 - M. Karamitros - microdosimetry-V10-00-04
122 - CommandLine updated                              28 - CommandLine updated
123 - Default output file's name corrected             29 - Default output file's name corrected
124 - remove microdosmietry.mac                        30 - remove microdosmietry.mac
125                                                    31 
126 08 Nov 2014 - M.Karamitros - microdosimetry-V1     32 08 Nov 2014 - M.Karamitros - microdosimetry-V10-00-03
127 - Clean command line options                       33 - Clean command line options
128                                                    34 
129 06 Nov 2014 - M.Karamitros - microdosimetry-V1     35 06 Nov 2014 - M.Karamitros - microdosimetry-V10-00-02
130 - Check analysis manager is actived removed        36 - Check analysis manager is actived removed
131 - Select gui + vis from command line option    <<  37 - Select gui + vis from command line option 
132                                                    38 
133 23 Oct 2013 - V.Ivanchenko - microdosimetry-V1     39 23 Oct 2013 - V.Ivanchenko - microdosimetry-V10-00-01
134 - Fixed user actions and enter flexible number     40 - Fixed user actions and enter flexible number of threads
135                                                    41 
136 22 Oct 2013 - M. Karamitros - microdosimetry-V     42 22 Oct 2013 - M. Karamitros - microdosimetry-V10-00-00
137 - confusion : 09-06 -> 10-00 - change name of      43 - confusion : 09-06 -> 10-00 - change name of the tag
138                                                    44 
139 22 Oct 2013 - M. Karamitros - microdosimetry-V     45 22 Oct 2013 - M. Karamitros - microdosimetry-V09-06-12
140 - Update READMEs                                   46 - Update READMEs
141                                                    47 
142 22 Oct 2013 - M. Karamitros - microdosimetry-V     48 22 Oct 2013 - M. Karamitros - microdosimetry-V09-06-11
143 - src: Add missing base class initialization       49 - src: Add missing base class initialization
144                                                    50 
145 22 Oct 2013 - M. Karamitros - microdosimetry-V     51 22 Oct 2013 - M. Karamitros - microdosimetry-V09-06-10
146 - Migration to extended                            52 - Migration to extended
147 - Add missing virtuals, clean classes              53 - Add missing virtuals, clean classes
148 - Add .README                                      54 - Add .README
149 - microdosimetry.mac -> microdosimetry.in          55 - microdosimetry.mac -> microdosimetry.in
150 - CMakeLists.txt: improve configuration of mac     56 - CMakeLists.txt: improve configuration of mac files
151 - Add RunInitObserver class and make TrackingA     57 - Add RunInitObserver class and make TrackingAction dependent on it
152                                                    58 
153 3 Oct 2013 - S. Incerti - microdosimetry-V09-0     59 3 Oct 2013 - S. Incerti - microdosimetry-V09-06-09
154 - Updated CMakeLists.txt                           60 - Updated CMakeLists.txt
155                                                    61 
156 30 Sep 2013 - I. Hrivnacova - microdosimetry-V     62 30 Sep 2013 - I. Hrivnacova - microdosimetry-V09-06-08
157 - Updated for changes in analysis:                 63 - Updated for changes in analysis:
158   (removal of G4AnalysisManager::Create(isMast     64   (removal of G4AnalysisManager::Create(isMaster))
159                                                    65 
160 22 Aug 2013 - S. Incerti - microdosimetry-V09-     66 22 Aug 2013 - S. Incerti - microdosimetry-V09-06-07
161 - Updated README                                   67 - Updated README
162                                                    68 
163 19 Aug 2013 - S. Incerti - microdosimetry-V09-     69 19 Aug 2013 - S. Incerti - microdosimetry-V09-06-06
164 - Updated README                                   70 - Updated README
165                                                    71 
166 30 July 2013 - A.Dotti - microdosimetry-V09-06     72 30 July 2013 - A.Dotti - microdosimetry-V09-06-05
167 - Fix compilation warnings from clang32            73 - Fix compilation warnings from clang32
168                                                    74 
169 7 June 2013 - M. Karamitros - microdosimetry-V     75 7 June 2013 - M. Karamitros - microdosimetry-V09-06-04
170 - Remove unnecessary output                        76 - Remove unnecessary output
171                                                    77 
172 7 June 2013 - M. Karamitros - microdosimetry-V     78 7 June 2013 - M. Karamitros - microdosimetry-V09-06-03
173 - Code clean up and comments added for beta re     79 - Code clean up and comments added for beta release
174                                                    80 
175 3 June 2013 - M. Karamitros - microdosimetry-V     81 3 June 2013 - M. Karamitros - microdosimetry-V09-06-02
176 - Fix initialization of sequential run             82 - Fix initialization of sequential run
177                                                    83 
178 10 Apr 2013 - M. Karamitros - microdosimetry-V     84 10 Apr 2013 - M. Karamitros - microdosimetry-V09-06-01
179 - Migration to MT                                  85 - Migration to MT
180                                                    86 
181 10 Apr 2013 - S. Incerti - microdosimetry-V09-     87 10 Apr 2013 - S. Incerti - microdosimetry-V09-06-00
182 - Updated msc model                                88 - Updated msc model
183                                                    89 
184 3 Nov 2012 - S.Incerti - microdosimetry-V09-05     90 3 Nov 2012 - S.Incerti - microdosimetry-V09-05-06
185 - Removed shadowing in SteppingAction              91 - Removed shadowing in SteppingAction
186 - Updated physics list for usage of SetEmModel     92 - Updated physics list for usage of SetEmModel() method
187                                                    93 
188 26 Oct 2012 - L.Pandola - microdosimetry-V09-0     94 26 Oct 2012 - L.Pandola - microdosimetry-V09-05-05
189 - Changed CMakeLists.txt to deal with VIS/UI       95 - Changed CMakeLists.txt to deal with VIS/UI
190                                                    96 
191 26 Oct 2012 - S.Incerti - microdosimetry-V09-0     97 26 Oct 2012 - S.Incerti - microdosimetry-V09-05-04
192 - Renamed executable                               98 - Renamed executable
193                                                    99 
194 12 Oct 2012 - G.Cosmo - microdosimetry-V09-05-    100 12 Oct 2012 - G.Cosmo - microdosimetry-V09-05-03
195 - Explicit inclusion of units and constants he    101 - Explicit inclusion of units and constants headers
196                                                   102 
197 1 Oct 2012 - V. Ivantchenko - microdosimetry-V    103 1 Oct 2012 - V. Ivantchenko - microdosimetry-V09-05-02
198 - G4ElectronCapture - clean up killing capture    104 - G4ElectronCapture - clean up killing captured electron
199                                                   105 
200 16 Aug 2012 - S. Incerti - microdosimetry-V09-    106 16 Aug 2012 - S. Incerti - microdosimetry-V09-05-01
201 - Switched to new analysis interface              107 - Switched to new analysis interface
202                                                   108 
203 10 Aug 2012 - S. Incerti - microdosimetry-V09-    109 10 Aug 2012 - S. Incerti - microdosimetry-V09-05-00
204 - Removed export=root option in HistoManager      110 - Removed export=root option in HistoManager
205                                                   111 
206 23 July 2012 - M. Karamitros -  microdosimetry    112 23 July 2012 - M. Karamitros -  microdosimetry-V09-04-07
207 - Added TrackingAction (count N secondaries cr    113 - Added TrackingAction (count N secondaries created in/outside
208   "target" region) + Modified related classes     114   "target" region) + Modified related classes (RunAct and main)
209                                                   115 
210 18 August 2011 - S. Incerti -  microdosimetry-    116 18 August 2011 - S. Incerti -  microdosimetry-V09-04-06
211 - Added scoring of msc                         << 117 - Added scoring of msc 
212                                                   118 
213 18 August 2011 - S. Incerti -  microdosimetry-    119 18 August 2011 - S. Incerti -  microdosimetry-V09-04-05
214 - Removed initStep test in SteppingAction         120 - Removed initStep test in SteppingAction
215                                                   121 
216 16 August 2011 - S. Incerti -  microdosimetry-    122 16 August 2011 - S. Incerti -  microdosimetry-V09-04-04
217 - Removed usage of system command                 123 - Removed usage of system command
218                                                   124 
219 27 May 2011 - S. Incerti -  microdosimetry-V09    125 27 May 2011 - S. Incerti -  microdosimetry-V09-04-03
220 - Switched back to ordered physics list           126 - Switched back to ordered physics list
221                                                   127 
222 20 May 2011 - S. Incerti -  microdosimetry-V09    128 20 May 2011 - S. Incerti -  microdosimetry-V09-04-02
223 - Switched to non-ordered physics list            129 - Switched to non-ordered physics list
224                                                   130 
225 02 April 2011 - S. Incerti -  microdosimetry-V    131 02 April 2011 - S. Incerti -  microdosimetry-V09-04-01
226 - Added new variables to histogram                132 - Added new variables to histogram
227                                                   133 
228 13 March 2011 - S. Incerti -  microdosimetry-V    134 13 March 2011 - S. Incerti -  microdosimetry-V09-04-00
229 - Switched to G4ionIonisation and 5 MeV proton    135 - Switched to G4ionIonisation and 5 MeV proton
230                                                   136 
231 18 November 2010 - J. Allison -  microdosimetr    137 18 November 2010 - J. Allison -  microdosimetry-V09-03-10
232 - Introduced G4UIExecutive.                       138 - Introduced G4UIExecutive.
233                                                   139 
234 12 November 2010 - S. Incerti -  microdosimetr    140 12 November 2010 - S. Incerti -  microdosimetry-V09-03-09
235 - Modified energy limit of Sanche vib excitati    141 - Modified energy limit of Sanche vib excitation for e-
236                                                   142 
237 09 November 2010 - M. Asai - microdosimetry-V0    143 09 November 2010 - M. Asai - microdosimetry-V09-03-08
238 - Fix AIDA file option.                           144 - Fix AIDA file option.
239                                                   145 
240 08 October 2010 - S. Incerti - microdosimetry-    146 08 October 2010 - S. Incerti - microdosimetry-V09-03-07
241 - added H excitation                              147 - added H excitation
242                                                   148 
243 06 October 2010 - S. Incerti - microdosimetry-    149 06 October 2010 - S. Incerti - microdosimetry-V09-03-06
244 - update for production of histograms with AID    150 - update for production of histograms with AIDA
245                                                   151 
246 13 September 2010 - S. Incerti - microdosimetr    152 13 September 2010 - S. Incerti - microdosimetry-V09-03-05
247 - added new G4DNA electron processes              153 - added new G4DNA electron processes
248 - updated SteppingAction and plot.C accordingl    154 - updated SteppingAction and plot.C accordingly
249                                                   155 
250 31 August 2010 - V.Ivanchenko - microdosimetry    156 31 August 2010 - V.Ivanchenko - microdosimetry-V09-03-04
251 - added electron capture process inside the ta    157 - added electron capture process inside the target
252                                                   158 
253 25 August 2010 - S. Incerti - microdosimetry-V    159 25 August 2010 - S. Incerti - microdosimetry-V09-03-03
254 - switched to G4DNABornExcitationModel for ele    160 - switched to G4DNABornExcitationModel for electrons
255                                                   161 
256 12 June 2010 - V.Ivanchenko    - microdosimetr    162 12 June 2010 - V.Ivanchenko    - microdosimetry-V09-03-02
257 - added target region and defined DNA physics     163 - added target region and defined DNA physics for this region
258                                                   164 
259 03 June 2010 - J.Perl    - microdosimetry-V09-    165 03 June 2010 - J.Perl    - microdosimetry-V09-03-01
260 - update vis usage                                166 - update vis usage
261                                                   167 
262 25 March 2010 - G.Folger    - microdosimetry-V    168 25 March 2010 - G.Folger    - microdosimetry-V09-03-00
263 - do not use G4UItcsh on windows                  169 - do not use G4UItcsh on windows
264                                                   170 
265 15 August 2009 - S. Incerti - microdosimetry-V    171 15 August 2009 - S. Incerti - microdosimetry-V09-02-04
266 - fixed type in GenericIonDefinition in Physic    172 - fixed type in GenericIonDefinition in PhysicsList.cc
267   (to be used with emlowen-V09-02-50 and above    173   (to be used with emlowen-V09-02-50 and above)
268                                                   174 
269 13 August 2009 - S. Incerti - microdosimetry-V    175 13 August 2009 - S. Incerti - microdosimetry-V09-02-03
270 - replaced H2O material by NIST G4_WATER       << 176 - replaced H2O material by NIST G4_WATER 
271   (to be used with emlowen-V09-02-50 and above << 177   (to be used with emlowen-V09-02-50 and above) 
272                                                   178 
273 10 August 2009 - S. Incerti - microdosimetry-V    179 10 August 2009 - S. Incerti - microdosimetry-V09-02-02
274 - added GenericIon definition to PhysicsList (    180 - added GenericIon definition to PhysicsList (required by rules of G4VUserPhysicsList)
275                                                   181 
276 29 April 2009 - S. Incerti - microdosimetry-V0    182 29 April 2009 - S. Incerti - microdosimetry-V09-02-01
277 - modified PhysicsList for migrated Geant4-DNA    183 - modified PhysicsList for migrated Geant4-DNA processes
278 - modified SteppingAction accordingly             184 - modified SteppingAction accordingly
279 - updated README                                  185 - updated README
280                                                   186 
281 27 June 2008 - S. Incerti - microdosimetry-V09    187 27 June 2008 - S. Incerti - microdosimetry-V09-01-04
282 - modified PhysicsList.cc and SteppingAction.c    188 - modified PhysicsList.cc and SteppingAction.cc to take into account
283 new G4CrossSectionElasticScreenedRutherfordLE     189 new G4CrossSectionElasticScreenedRutherfordLE and HE classes
284 (from emlowen-V09-01-21 only !)                   190 (from emlowen-V09-01-21 only !)
285 - removed G4CrossSectionExcitationEmfietzoglou    191 - removed G4CrossSectionExcitationEmfietzoglou.cc
286                                                   192 
287 20 June 2008 - S. Incerti - microdosimetry-V09    193 20 June 2008 - S. Incerti - microdosimetry-V09-01-03
288 - updated History                                 194 - updated History
289                                                   195 
290 10 June 2008 - S. Incerti - microdosimetry-V09    196 10 June 2008 - S. Incerti - microdosimetry-V09-01-02
291 - added G4CrossSectionExcitationEmfietzoglou.c    197 - added G4CrossSectionExcitationEmfietzoglou.cc with higher low energy limit (10 eV) than default (7.4 eV)
292 - added G4DNA process names in Physics list       198 - added G4DNA process names in Physics list
293 - removed useless G4DNAProcess.hh and G4DNAPro    199 - removed useless G4DNAProcess.hh and G4DNAProcess.icc files
294                                                   200 
295 06 June 2008 - S. Incerti - microdosimetry-V09    201 06 June 2008 - S. Incerti - microdosimetry-V09-01-01
296 - Package created.                                202 - Package created.