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1 // 1 //
2 // ******************************************* 2 // ********************************************************************
3 // * License and Disclaimer 3 // * License and Disclaimer *
4 // * 4 // * *
5 // * The Geant4 software is copyright of th 5 // * The Geant4 software is copyright of the Copyright Holders of *
6 // * the Geant4 Collaboration. It is provided 6 // * the Geant4 Collaboration. It is provided under the terms and *
7 // * conditions of the Geant4 Software License 7 // * conditions of the Geant4 Software License, included in the file *
8 // * LICENSE and available at http://cern.ch/ 8 // * LICENSE and available at http://cern.ch/geant4/license . These *
9 // * include a list of copyright holders. 9 // * include a list of copyright holders. *
10 // * 10 // * *
11 // * Neither the authors of this software syst 11 // * Neither the authors of this software system, nor their employing *
12 // * institutes,nor the agencies providing fin 12 // * institutes,nor the agencies providing financial support for this *
13 // * work make any representation or warran 13 // * work make any representation or warranty, express or implied, *
14 // * regarding this software system or assum 14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file 15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitatio 16 // * for the full disclaimer and the limitation of liability. *
17 // * 17 // * *
18 // * This code implementation is the result 18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboratio 19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distri 20 // * By using, copying, modifying or distributing the software (or *
21 // * any work based on the software) you ag 21 // * any work based on the software) you agree to acknowledge its *
22 // * use in resulting scientific publicati 22 // * use in resulting scientific publications, and indicate your *
23 // * acceptance of all terms of the Geant4 Sof 23 // * acceptance of all terms of the Geant4 Software license. *
24 // ******************************************* 24 // ********************************************************************
25 // 25 //
26 // This example is provided by the Geant4-DNA 26 // This example is provided by the Geant4-DNA collaboration
27 // Any report or published results obtained us << 27 // Any report or published results obtained using the Geant4-DNA software
28 // shall cite the following Geant4-DNA collabo << 28 // shall cite the following Geant4-DNA collaboration publication:
29 // Med. Phys. 45 (2018) e722-e739 <<
30 // Phys. Med. 31 (2015) 861-874 <<
31 // Med. Phys. 37 (2010) 4692-4708 29 // Med. Phys. 37 (2010) 4692-4708
32 // Int. J. Model. Simul. Sci. Comput. 1 (2010) <<
33 // <<
34 // The Geant4-DNA web site is available at htt 30 // The Geant4-DNA web site is available at http://geant4-dna.org
35 // 31 //
>> 32 //
36 /// \file RunAction.cc 33 /// \file RunAction.cc
37 /// \brief Implementation of the RunAction cla 34 /// \brief Implementation of the RunAction class
38 35
39 #include "RunAction.hh" 36 #include "RunAction.hh"
>> 37 #include "Analysis.hh"
40 38
41 #include "G4AnalysisManager.hh" <<
42 #include "G4Run.hh" 39 #include "G4Run.hh"
43 40
44 //....oooOO0OOooo........oooOO0OOooo........oo 41 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
45 42
46 RunAction::RunAction() : G4UserRunAction() << 43 RunAction::RunAction(): G4UserRunAction()
47 { 44 {
>> 45 // Book histograms, ntuple
>> 46
48 // Create analysis manager 47 // Create analysis manager
49 G4cout << "##### Create analysis manager " << 48 // The choice of analysis technology is done via selection of a namespace
50 << " " << this << G4endl; << 49 // in Analysis.hh
51 auto analysisManager = G4AnalysisManager::In <<
52 50
53 analysisManager->SetDefaultFileType("root"); << 51 G4cout << "##### Create analysis manager " << " " << this << G4endl;
>> 52 auto analysisManager = G4AnalysisManager::Instance();
>> 53
54 analysisManager->SetNtupleMerging(true); 54 analysisManager->SetNtupleMerging(true);
55 << 55
56 G4cout << "Using " << analysisManager->GetTy << 56 G4cout << "Using " << analysisManager->GetType()
>> 57 << " analysis manager"
>> 58 << G4endl;
57 59
58 analysisManager->SetVerboseLevel(1); 60 analysisManager->SetVerboseLevel(1);
59 << 61
60 // Creating ntuple 62 // Creating ntuple
61 << 63
62 // Step information ntuple << 64 analysisManager->CreateNtuple("dna", "dnaphysics");
63 analysisManager->CreateNtuple("step", "dnaph <<
64 analysisManager->CreateNtupleDColumn("flagPa 65 analysisManager->CreateNtupleDColumn("flagParticle");
65 analysisManager->CreateNtupleDColumn("flagPr 66 analysisManager->CreateNtupleDColumn("flagProcess");
66 analysisManager->CreateNtupleDColumn("x"); 67 analysisManager->CreateNtupleDColumn("x");
67 analysisManager->CreateNtupleDColumn("y"); 68 analysisManager->CreateNtupleDColumn("y");
68 analysisManager->CreateNtupleDColumn("z"); 69 analysisManager->CreateNtupleDColumn("z");
69 analysisManager->CreateNtupleDColumn("totalE 70 analysisManager->CreateNtupleDColumn("totalEnergyDeposit");
70 analysisManager->CreateNtupleDColumn("stepLe 71 analysisManager->CreateNtupleDColumn("stepLength");
71 analysisManager->CreateNtupleDColumn("kineti 72 analysisManager->CreateNtupleDColumn("kineticEnergyDifference");
72 analysisManager->CreateNtupleDColumn("kineti 73 analysisManager->CreateNtupleDColumn("kineticEnergy");
73 analysisManager->CreateNtupleDColumn("cosThe 74 analysisManager->CreateNtupleDColumn("cosTheta");
74 analysisManager->CreateNtupleIColumn("eventI 75 analysisManager->CreateNtupleIColumn("eventID");
75 analysisManager->CreateNtupleIColumn("trackI 76 analysisManager->CreateNtupleIColumn("trackID");
76 analysisManager->CreateNtupleIColumn("parent 77 analysisManager->CreateNtupleIColumn("parentID");
77 analysisManager->CreateNtupleIColumn("stepID 78 analysisManager->CreateNtupleIColumn("stepID");
78 analysisManager->FinishNtuple(); 79 analysisManager->FinishNtuple();
79 80
80 // Track information ntuple <<
81 analysisManager->CreateNtuple("track", "dnap <<
82 analysisManager->CreateNtupleDColumn("flagPa <<
83 analysisManager->CreateNtupleDColumn("x"); <<
84 analysisManager->CreateNtupleDColumn("y"); <<
85 analysisManager->CreateNtupleDColumn("z"); <<
86 analysisManager->CreateNtupleDColumn("dirx") <<
87 analysisManager->CreateNtupleDColumn("diry") <<
88 analysisManager->CreateNtupleDColumn("dirz") <<
89 analysisManager->CreateNtupleDColumn("kineti <<
90 analysisManager->CreateNtupleIColumn("trackI <<
91 analysisManager->CreateNtupleIColumn("parent <<
92 analysisManager->FinishNtuple(); <<
93 } 81 }
94 82
95 //....oooOO0OOooo........oooOO0OOooo........oo 83 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
96 84
97 RunAction::~RunAction() {} << 85 RunAction::~RunAction()
>> 86 {
>> 87 delete G4AnalysisManager::Instance();
>> 88 }
98 89
99 //....oooOO0OOooo........oooOO0OOooo........oo 90 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
100 91
101 void RunAction::BeginOfRunAction(const G4Run*) 92 void RunAction::BeginOfRunAction(const G4Run*)
102 { << 93 {
103 auto analysisManager = G4AnalysisManager::In 94 auto analysisManager = G4AnalysisManager::Instance();
104 95
105 // Open an output file 96 // Open an output file
>> 97
106 G4String fileName = "dna"; 98 G4String fileName = "dna";
107 analysisManager->OpenFile(fileName); 99 analysisManager->OpenFile(fileName);
108 } 100 }
109 << 101
110 //....oooOO0OOooo........oooOO0OOooo........oo 102 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
111 103
112 void RunAction::EndOfRunAction(const G4Run* aR 104 void RunAction::EndOfRunAction(const G4Run* aRun)
113 { 105 {
114 G4int nofEvents = aRun->GetNumberOfEvent(); 106 G4int nofEvents = aRun->GetNumberOfEvent();
115 if (nofEvents == 0) return; << 107 if ( nofEvents == 0 ) return;
116 << 108
117 // Print histogram statistics << 109 // print histogram statistics
>> 110
118 auto analysisManager = G4AnalysisManager::In 111 auto analysisManager = G4AnalysisManager::Instance();
119 << 112
120 // Save histograms << 113 // save histograms
>> 114
121 analysisManager->Write(); 115 analysisManager->Write();
122 analysisManager->CloseFile(); 116 analysisManager->CloseFile();
123 } 117 }
124 118