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Geant4/examples/extended/medical/dna/dnadamage1/src/SteppingAction.cc

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Diff markup

Differences between /examples/extended/medical/dna/dnadamage1/src/SteppingAction.cc (Version 11.3.0) and /examples/extended/medical/dna/dnadamage1/src/SteppingAction.cc (Version 9.3.p1)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 //                                                
 27 #include "SteppingAction.hh"                      
 28                                                   
 29 #include "DetectorConstruction.hh"                
 30                                                   
 31 #include "G4AnalysisManager.hh"                   
 32 #include "G4DNAElastic.hh"                        
 33 #include "G4DNAElectronSolvation.hh"              
 34 #include "G4Event.hh"                             
 35 #include "G4EventManager.hh"                      
 36 #include "G4ITTrackHolder.hh"                     
 37 #include "G4Molecule.hh"                          
 38 #include "G4SystemOfUnits.hh"                     
 39 #include "G4Track.hh"                             
 40 #include "globals.hh"                             
 41                                                   
 42 #include <map>                                    
 43                                                   
 44 using MapOfDelayedLists = std::map<double, std    
 45                                                   
 46 //....oooOO0OOooo........oooOO0OOooo........oo    
 47                                                   
 48 SteppingAction::SteppingAction(DetectorConstru    
 49   : G4UserSteppingAction(), fpDetector(fpDet)     
 50 {}                                                
 51                                                   
 52 //....oooOO0OOooo........oooOO0OOooo........oo    
 53                                                   
 54 SteppingAction::~SteppingAction() {}              
 55                                                   
 56 //....oooOO0OOooo........oooOO0OOooo........oo    
 57                                                   
 58 void SteppingAction::UserSteppingAction(const     
 59 {                                                 
 60   SetupFlags(step);                               
 61                                                   
 62   if (fVolumeType == DNAVolumeType::physWorld)    
 63     step->GetTrack()->SetTrackStatus(fStopAndK    
 64   }                                               
 65                                                   
 66   if (fVolumeType == DNAVolumeType::VoxelStrai    
 67     return;                                       
 68   }                                               
 69                                                   
 70   G4double dE = step->GetTotalEnergyDeposit()     
 71   const G4VProcess* pProcess = step->GetPostSt    
 72                                                   
 73   // get all processes except G4DNAElectronSol    
 74   if ((0 > dE) || (nullptr != dynamic_cast<con    
 75     return;                                       
 76   }                                               
 77                                                   
 78   G4double x = step->GetPreStepPoint()->GetPos    
 79   G4double y = step->GetPreStepPoint()->GetPos    
 80   G4double z = step->GetPreStepPoint()->GetPos    
 81                                                   
 82   G4double copyNo = G4double(step->GetPreStepP    
 83                                                   
 84   G4double eventId =                              
 85     G4double(G4EventManager::GetEventManager()    
 86                                                   
 87   G4AnalysisManager* analysisManager = G4Analy    
 88   analysisManager->FillNtupleDColumn(1, 0, x);    
 89   analysisManager->FillNtupleDColumn(1, 1, y);    
 90   analysisManager->FillNtupleDColumn(1, 2, z);    
 91   analysisManager->FillNtupleDColumn(1, 3, dE)    
 92   analysisManager->FillNtupleDColumn(             
 93     1, 4,                                         
 94     (step->GetPreStepPoint()->GetKineticEnergy    
 95       / eV);                                      
 96   analysisManager->FillNtupleIColumn(1, 5, G4i    
 97   analysisManager->FillNtupleDColumn(1, 6, cop    
 98   analysisManager->FillNtupleIColumn(1, 7, eve    
 99   analysisManager->AddNtupleRow(1);               
100                                                   
101   MapOfDelayedLists delayList = G4ITTrackHolde    
102   for (auto& delayedmap_it : delayList) {         
103     for (auto& trackList : delayedmap_it.secon    
104       if (nullptr == trackList.second) {          
105         return;                                   
106       }                                           
107       G4TrackList::iterator itt = trackList.se    
108       G4TrackList::iterator endd = trackList.s    
109       for (; itt != endd; ++itt) {                
110         G4Track* track = *itt;                    
111         if (track->GetParentID() != step->GetT    
112             || track->GetPosition() != step->G    
113         {                                         
114           return;                                 
115         }                                         
116                                                   
117         track->SetTrackStatus(fStopAndKill);      
118       }                                           
119     }                                             
120   }                                               
121 }                                                 
122 //....oooOO0OOooo........oooOO0OOooo........oo    
123                                                   
124 void SteppingAction::SetupFlags(const G4Step*     
125 {                                                 
126   fVolumeType = SetupVolumeType(step->GetPreSt    
127 }                                                 
128                                                   
129 //....oooOO0OOooo........oooOO0OOooo........oo    
130                                                   
131 DNAVolumeType SteppingAction::SetupVolumeType(    
132 {                                                 
133   auto it = (fpDetector->GetGeoDataMap()).find    
134                                                   
135   if (it == (fpDetector->GetGeoDataMap()).end(    
136     G4ExceptionDescription exceptionDescriptio    
137     exceptionDescription << pPhyVolume->GetNam    
138     G4Exception("SteppingAction::SetupVolumeFl    
139                 exceptionDescription);            
140   }                                               
141                                                   
142   return it->second;                              
143 }                                                 
144 //....oooOO0OOooo........oooOO0OOooo........oo    
145