Geant4 Cross Reference

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Geant4/examples/extended/medical/dna/dnadamage1/src/RunAction.cc

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

Diff markup

Differences between /examples/extended/medical/dna/dnadamage1/src/RunAction.cc (Version 11.3.0) and /examples/extended/medical/dna/dnadamage1/src/RunAction.cc (Version 11.1.3)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 // Authors: S. Meylan and C. Villagrasa (IRSN,     25 // Authors: S. Meylan and C. Villagrasa (IRSN, France)
 26 // Updated: H. Tran (IRSN), France: 20/12/2018     26 // Updated: H. Tran (IRSN), France: 20/12/2018
 27                                                    27 
 28 #include "RunAction.hh"                            28 #include "RunAction.hh"
 29                                                << 
 30 #include "G4AnalysisManager.hh"                << 
 31 #include "G4Run.hh"                                29 #include "G4Run.hh"
                                                   >>  30 #include "G4AnalysisManager.hh"
 32 #include "globals.hh"                              31 #include "globals.hh"
 33                                                << 
 34 #include <map>                                     32 #include <map>
 35                                                    33 
 36 //....oooOO0OOooo........oooOO0OOooo........oo     34 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
 37                                                    35 
 38 RunAction::RunAction() : G4UserRunAction() {}  <<  36 RunAction::RunAction()
                                                   >>  37     : G4UserRunAction()
                                                   >>  38 {}
 39                                                    39 
 40 //....oooOO0OOooo........oooOO0OOooo........oo     40 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
 41                                                    41 
 42 RunAction::~RunAction() {}                     <<  42 RunAction::~RunAction()
                                                   >>  43 {}
 43                                                    44 
 44 //....oooOO0OOooo........oooOO0OOooo........oo     45 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
 45                                                    46 
 46 void RunAction::BeginOfRunAction(const G4Run*)     47 void RunAction::BeginOfRunAction(const G4Run*)
 47 {                                                  48 {
 48   CreateNtuple("output.root");                 <<  49     CreateNtuple("output.root");
 49 }                                                  50 }
 50                                                    51 
 51 //....oooOO0OOooo........oooOO0OOooo........oo     52 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
 52                                                    53 
 53 void RunAction::EndOfRunAction(const G4Run*)       54 void RunAction::EndOfRunAction(const G4Run*)
 54 {                                                  55 {
 55   WriteNtuple();                               <<  56     WriteNtuple();
 56 }                                                  57 }
 57                                                    58 
 58 //....oooOO0OOooo........oooOO0OOooo........oo     59 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
 59                                                    60 
 60 void RunAction::CreateNtuple(const G4String& n     61 void RunAction::CreateNtuple(const G4String& name)
 61 {                                                  62 {
 62   G4AnalysisManager* analysisManager = G4Analy <<  63     G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
 63   analysisManager->SetDefaultFileType("root"); <<  64     analysisManager->SetDefaultFileType("root");
 64   analysisManager->SetVerboseLevel(0);         <<  65     analysisManager->SetVerboseLevel(0);
 65   analysisManager->SetNtupleDirectoryName("ntu <<  66     analysisManager->SetNtupleDirectoryName("ntuple");
 66                                                <<  67 
 67   // open output file                          <<  68     // open output file
 68   //                                           <<  69     //
 69   G4bool fileOpen = analysisManager->OpenFile( <<  70     G4bool fileOpen = analysisManager->OpenFile(name);
 70   if (!fileOpen) {                             <<  71     if (!fileOpen)
 71     G4cout << "\n---> HistoManager::book(): ca <<  72     {
 72     return;                                    <<  73         G4cout << "\n---> HistoManager::book(): cannot open " << name<< G4endl;
 73   }                                            <<  74         return;
 74                                                <<  75     }
 75   analysisManager->SetFirstNtupleId(1);        <<  76 
 76   analysisManager->CreateNtuple("ntuple_1", "p <<  77     analysisManager->SetFirstNtupleId(1);
 77   analysisManager->CreateNtupleDColumn(1, "x") <<  78     analysisManager->CreateNtuple("ntuple_1","physical_stage");
 78   analysisManager->CreateNtupleDColumn(1, "y") <<  79     analysisManager->CreateNtupleDColumn(1,"x");
 79   analysisManager->CreateNtupleDColumn(1, "z") <<  80     analysisManager->CreateNtupleDColumn(1,"y");
 80   analysisManager->CreateNtupleDColumn(1, "ede <<  81     analysisManager->CreateNtupleDColumn(1,"z");
 81   analysisManager->CreateNtupleDColumn(1, "dif <<  82     analysisManager->CreateNtupleDColumn(1,"edep");
 82   analysisManager->CreateNtupleIColumn(1, "vol <<  83     analysisManager->CreateNtupleDColumn(1,"diffKin");
 83   analysisManager->CreateNtupleDColumn(1, "Cop <<  84     analysisManager->CreateNtupleIColumn(1,"volumeName");
 84   analysisManager->CreateNtupleIColumn(1, "Eve <<  85     analysisManager->CreateNtupleDColumn(1,"CopyNumber");
 85   analysisManager->FinishNtuple(1);            <<  86     analysisManager->CreateNtupleIColumn(1,"EventID");
 86                                                <<  87     analysisManager->FinishNtuple(1);
 87   // For chemistry                             <<  88 
 88                                                <<  89     // For chemistry
 89   analysisManager->CreateNtuple("ntuple_2", "c <<  90 
 90   analysisManager->CreateNtupleDColumn(2, "x") <<  91     analysisManager->CreateNtuple("ntuple_2","chem_stage");
 91   analysisManager->CreateNtupleDColumn(2, "y") <<  92     analysisManager->CreateNtupleDColumn(2,"x");
 92   analysisManager->CreateNtupleDColumn(2, "z") <<  93     analysisManager->CreateNtupleDColumn(2,"y");
 93   analysisManager->CreateNtupleSColumn(2, "Rad <<  94     analysisManager->CreateNtupleDColumn(2,"z");
 94   analysisManager->CreateNtupleIColumn(2, "Eve <<  95     analysisManager->CreateNtupleSColumn(2,"RadName");
 95   analysisManager->FinishNtuple(2);            <<  96     analysisManager->CreateNtupleIColumn(2,"EventID");
                                                   >>  97     analysisManager->FinishNtuple(2);
 96                                                    98 
 97   G4cout << "\n----> Histogram file is opened  <<  99     G4cout << "\n----> Histogram file is opened in " << name << G4endl;
 98 }                                                 100 }
 99                                                   101 
100 //....oooOO0OOooo........oooOO0OOooo........oo    102 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
101 void RunAction::WriteNtuple()                     103 void RunAction::WriteNtuple()
102 {                                                 104 {
103   G4AnalysisManager* analysisManager = G4Analy << 105     G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
104   analysisManager->Write();                    << 106     analysisManager->Write();
105   analysisManager->CloseFile();                << 107     analysisManager->CloseFile();
106   analysisManager->Clear();                    << 108     analysisManager->Clear();
107   G4cout << "\n----> Histograms are saved" <<  << 109     G4cout << "\n----> Histograms are saved" << G4endl;
108 }                                                 110 }
109                                                   111