Geant4 Cross Reference

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Geant4/examples/extended/medical/dna/clustering/src/RunAction.cc

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

Diff markup

Differences between /examples/extended/medical/dna/clustering/src/RunAction.cc (Version 11.3.0) and /examples/extended/medical/dna/clustering/src/RunAction.cc (Version 10.5)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 // This example is provided by the Geant4-DNA      26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained us     27 // Any report or published results obtained using the Geant4-DNA software
 28 // shall cite the following Geant4-DNA collabo     28 // shall cite the following Geant4-DNA collaboration publication:
 29 // Med. Phys. 37 (2010) 4692-4708                  29 // Med. Phys. 37 (2010) 4692-4708
 30 // The Geant4-DNA web site is available at htt     30 // The Geant4-DNA web site is available at http://geant4-dna.org
 31 //                                                 31 //
 32 //                                                 32 //
 33 /// \file RunAction.cc                             33 /// \file RunAction.cc
 34 /// \brief Implementation of the RunAction cla     34 /// \brief Implementation of the RunAction class
 35                                                    35 
                                                   >>  36 #include "Analysis.hh"
 36 #include "RunAction.hh"                            37 #include "RunAction.hh"
 37                                                << 
 38 #include "RunActionMessenger.hh"               << 
 39 #include "RunInitObserver.hh"                      38 #include "RunInitObserver.hh"
                                                   >>  39 #include "RunActionMessenger.hh"
 40                                                    40 
 41 #include "G4AnalysisManager.hh"                << 
 42 #include "G4Run.hh"                                41 #include "G4Run.hh"
 43 #include "G4RunManager.hh"                         42 #include "G4RunManager.hh"
 44                                                    43 
 45 //....oooOO0OOooo........oooOO0OOooo........oo     44 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 46                                                    45 
 47 RunAction::RunAction() : G4UserRunAction()     <<  46 RunAction::RunAction()
                                                   >>  47 : G4UserRunAction()
 48 {                                                  48 {
 49   fFileName = "clusters_output";               <<  49   fFileName="clusters_output";
 50   fpRunMessenger = new RunActionMessenger(this     50   fpRunMessenger = new RunActionMessenger(this);
 51   CreateHistogram();                               51   CreateHistogram();
 52 }                                                  52 }
 53                                                    53 
 54 //....oooOO0OOooo........oooOO0OOooo........oo     54 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 55                                                    55 
 56 RunAction::~RunAction()                            56 RunAction::~RunAction()
 57 {                                                  57 {
 58   delete fpRunMessenger;                           58   delete fpRunMessenger;
                                                   >>  59   delete G4AnalysisManager::Instance();
 59 }                                                  60 }
 60                                                    61 
 61 //....oooOO0OOooo........oooOO0OOooo........oo     62 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 62                                                    63 
 63 void RunAction::BeginOfRunAction(const G4Run*)     64 void RunAction::BeginOfRunAction(const G4Run*)
 64 {                                              <<  65 { 
 65   //                                               66   //
 66   RunInitManager::Instance()->Initialize();        67   RunInitManager::Instance()->Initialize();
 67                                                    68 
 68   // Get analysis manager                          69   // Get analysis manager
 69   G4AnalysisManager* analysisManager = G4Analy     70   G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
 70   analysisManager->SetDefaultFileType("root"); << 
 71                                                    71 
 72   // Open an output file                           72   // Open an output file
 73   analysisManager->OpenFile(fFileName);            73   analysisManager->OpenFile(fFileName);
 74   G4cout << "\n----> Histogram file is opened  <<  74   G4cout << "\n----> Histogram file is opened in " <<
 75          << analysisManager->GetFileType() <<  <<  75       fFileName << "." << analysisManager->GetFileType() << G4endl;
 76 }                                                  76 }
 77                                                    77 
 78 //....oooOO0OOooo........oooOO0OOooo........oo     78 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 79                                                    79 
 80 void RunAction::EndOfRunAction(const G4Run*)       80 void RunAction::EndOfRunAction(const G4Run*)
 81 {                                                  81 {
 82   G4AnalysisManager* analysisManager = G4Analy     82   G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
 83   analysisManager->Write();                        83   analysisManager->Write();
 84   analysisManager->CloseFile();                    84   analysisManager->CloseFile();
 85 }                                                  85 }
 86                                                    86 
 87 //....oooOO0OOooo........oooOO0OOooo........oo     87 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 88                                                    88 
 89 void RunAction::CreateHistogram()                  89 void RunAction::CreateHistogram()
 90 {                                                  90 {
 91   G4AnalysisManager* analysisManager = G4Analy     91   G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
 92   analysisManager->SetFirstHistoId(1);             92   analysisManager->SetFirstHistoId(1);
 93   analysisManager->CreateH1("1", "simpleSSB",  <<  93   analysisManager->CreateH1("1","simpleSSB",75,0.,75);
 94   analysisManager->CreateH1("2", "complexSSB", <<  94   analysisManager->CreateH1("2","complexSSB",75,0.,75);
 95   analysisManager->CreateH1("3", "DSB", 75, 0. <<  95   analysisManager->CreateH1("3","DSB",75,0.,75);
 96   analysisManager->CreateH1("4", "cluster size <<  96   analysisManager->CreateH1("4","cluster size",20,1,20);
 97   analysisManager->CreateH1("5", "edep", 1, 0. <<  97   analysisManager->CreateH1("5","edep",1,0.,1E6);
 98 }                                                  98 }
 99                                                    99 
100 //....oooOO0OOooo........oooOO0OOooo........oo    100 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
101                                                   101 
102 void RunAction::WriteHistogram()                  102 void RunAction::WriteHistogram()
103 {                                                 103 {
104   G4AnalysisManager* analysisManager = G4Analy    104   G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
105   analysisManager->Write();                       105   analysisManager->Write();
106   analysisManager->CloseFile();                   106   analysisManager->CloseFile();
107 }                                                 107 }
                                                   >> 108 
108                                                   109