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Geant4/examples/extended/medical/dna/chem5/src/PrimaryKiller.cc

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Differences between /examples/extended/medical/dna/chem5/src/PrimaryKiller.cc (Version 11.3.0) and /examples/extended/medical/dna/chem5/src/PrimaryKiller.cc (Version 11.1.2)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 // This example is provided by the Geant4-DNA      26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained us     27 // Any report or published results obtained using the Geant4-DNA software
 28 // shall cite the following Geant4-DNA collabo     28 // shall cite the following Geant4-DNA collaboration publication:
 29 // Med. Phys. 37 (2010) 4692-4708                  29 // Med. Phys. 37 (2010) 4692-4708
 30 // J. Comput. Phys. 274 (2014) 841-882             30 // J. Comput. Phys. 274 (2014) 841-882
 31 // Phys. Med. Biol. 63(10) (2018) 105014-12pp      31 // Phys. Med. Biol. 63(10) (2018) 105014-12pp
 32 // The Geant4-DNA web site is available at htt     32 // The Geant4-DNA web site is available at http://geant4-dna.org
 33 //                                                 33 //
 34 //                                                 34 //
 35 #include "PrimaryKiller.hh"                        35 #include "PrimaryKiller.hh"
 36                                                    36 
                                                   >>  37 #include <G4UnitsTable.hh>
 37 #include <G4Event.hh>                              38 #include <G4Event.hh>
 38 #include <G4EventManager.hh>                   << 
 39 #include <G4RunManager.hh>                     << 
 40 #include <G4SystemOfUnits.hh>                      39 #include <G4SystemOfUnits.hh>
 41 #include <G4UIcmdWithADoubleAndUnit.hh>        << 
 42 #include <G4UnitsTable.hh>                     << 
 43 #include <globals.hh>                              40 #include <globals.hh>
                                                   >>  41 #include <G4UIcmdWithADoubleAndUnit.hh>
                                                   >>  42 #include <G4RunManager.hh>
                                                   >>  43 #include <G4EventManager.hh>
 44                                                    44 
 45 /** \file PrimaryKiller.cc                         45 /** \file PrimaryKiller.cc
 46     \class PrimaryKiller                           46     \class PrimaryKiller
 47                                                    47 
 48     Kill the primary particle:                     48     Kill the primary particle:
 49     - either after a given energy loss             49     - either after a given energy loss
 50     - or after the primary particle has reache     50     - or after the primary particle has reached a given energy
 51  */                                                51  */
 52                                                    52 
 53 //....oooOO0OOooo........oooOO0OOooo........oo     53 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 54                                                    54 
 55 PrimaryKiller::PrimaryKiller(G4String name, G4     55 PrimaryKiller::PrimaryKiller(G4String name, G4int depth)
 56   : G4VPrimitiveScorer(name, depth), G4UImesse <<  56 : G4VPrimitiveScorer(name,depth),
                                                   >>  57   G4UImessenger()
 57 {                                                  58 {
 58   fELoss = 0.;  // cumulated energy for curren <<  59   fELoss = 0.; // cumulated energy for current event
 59                                                <<  60   
 60   fELossRange_Min = DBL_MAX;  // fELoss from w <<  61   fELossRange_Min = DBL_MAX; // fELoss from which the primary is killed
 61   fELossRange_Max = DBL_MAX;  // fELoss from w <<  62   fELossRange_Max = DBL_MAX; // fELoss from which the event is aborted
 62   fKineticE_Min = 0;  // kinetic energy below  <<  63   fKineticE_Min = 0; // kinetic energy below which the primary is killed
 63                                                <<  64   
 64   fpELossUI = new G4UIcmdWithADoubleAndUnit("/ <<  65   fpELossUI = new G4UIcmdWithADoubleAndUnit("/primaryKiller/eLossMin",this);
 65   fpAbortEventIfELossUpperThan = new G4UIcmdWi <<  66   fpAbortEventIfELossUpperThan =
 66   fpMinKineticE = new G4UIcmdWithADoubleAndUni <<  67     new G4UIcmdWithADoubleAndUnit("/primaryKiller/eLossMax", this);
                                                   >>  68   fpMinKineticE =
                                                   >>  69    new G4UIcmdWithADoubleAndUnit("/primaryKiller/minKineticE", this);
 67 }                                                  70 }
 68                                                    71 
 69 //....oooOO0OOooo........oooOO0OOooo........oo     72 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 70                                                    73 
 71 PrimaryKiller::~PrimaryKiller()                    74 PrimaryKiller::~PrimaryKiller()
 72 {                                              <<  75 {;}
 73   ;                                            << 
 74 }                                              << 
 75                                                    76 
 76 //....oooOO0OOooo........oooOO0OOooo........oo     77 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 77                                                    78 
 78 void PrimaryKiller::SetNewValue(G4UIcommand* c <<  79 void PrimaryKiller::SetNewValue(G4UIcommand * command,
                                                   >>  80                                 G4String newValue)
 79 {                                                  81 {
 80   if (command == fpELossUI) {                  <<  82   if(command == fpELossUI){
 81     fELossRange_Min = fpELossUI->GetNewDoubleV     83     fELossRange_Min = fpELossUI->GetNewDoubleValue(newValue);
 82   }                                                84   }
 83   else if (command == fpAbortEventIfELossUpper <<  85   else if(command == fpAbortEventIfELossUpperThan){
 84     fELossRange_Max = fpAbortEventIfELossUpper <<  86     fELossRange_Max =
                                                   >>  87       fpAbortEventIfELossUpperThan->GetNewDoubleValue(newValue);
 85   }                                                88   }
 86 }                                                  89 }
 87                                                    90 
 88 //....oooOO0OOooo........oooOO0OOooo........oo     91 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 89                                                    92 
 90 G4bool PrimaryKiller::ProcessHits(G4Step* aSte <<  93 G4bool PrimaryKiller::ProcessHits(G4Step* aStep,G4TouchableHistory*)
 91 {                                                  94 {
 92   const G4Track* track = aStep->GetTrack();        95   const G4Track* track = aStep->GetTrack();
 93                                                <<  96   
 94   if (track->GetTrackID() != 1) return FALSE;  <<  97   if(track->GetTrackID() != 1) return FALSE;
 95                                                <<  98   
 96   //-------------------                            99   //-------------------
 97                                                << 100   
 98   double kineticE = aStep->GetPostStepPoint()-    101   double kineticE = aStep->GetPostStepPoint()->GetKineticEnergy();
                                                   >> 102   
                                                   >> 103   G4double eLoss = aStep->GetPreStepPoint()->GetKineticEnergy()
                                                   >> 104                   - kineticE;
 99                                                   105 
100   G4double eLoss = aStep->GetPreStepPoint()->G << 106   if ( eLoss == 0. ) return FALSE;
101                                                << 107   
102   if (eLoss == 0.) return FALSE;               << 
103                                                << 
104   //-------------------                           108   //-------------------
105                                                   109 
106   fELoss += eLoss;                             << 110   fELoss+=eLoss;
107                                                << 111   
108   if (fELoss > fELossRange_Max) {              << 112   if(fELoss > fELossRange_Max){
109     G4RunManager::GetRunManager()->AbortEvent(    113     G4RunManager::GetRunManager()->AbortEvent();
110     int eventID = G4EventManager::GetEventMana << 114     int eventID =
111     G4cout << "Aborts event " << eventID       << 115      G4EventManager::GetEventManager()->GetConstCurrentEvent()->GetEventID();
112            << ", energy loss "                 << 116     G4cout << "Aborts event " << eventID <<", energy loss "
113               "is too large. \n"                  117               "is too large. \n"
114            << " * Energy loss by primary is: " << 118            << " * Energy loss by primary is: "
115            << ". Event is aborted if the Eloss << 119            << G4BestUnit(fELoss, "Energy")
                                                   >> 120            << ". Event is aborted if the Eloss is > "
                                                   >> 121            << G4BestUnit(fELossRange_Max, "Energy")
116            << G4endl;                             122            << G4endl;
                                                   >> 123     
117   }                                               124   }
118                                                << 125   
119   if (fELoss >= fELossRange_Min) {  //|| kinet << 126   if(fELoss >= fELossRange_Min ) { //|| kineticE <= fKineticE_Min){
120     ((G4Track*)track)->SetTrackStatus(fStopAnd    127     ((G4Track*)track)->SetTrackStatus(fStopAndKill);
121     G4cout << "Kill track at : " << G4BestUnit << 128      G4cout << "Kill track at : "
122            << ", Energy loss by primary is: "  << 129            << G4BestUnit(kineticE, "Energy")
123            << ", primary is terminated as Elos << 130            << ", Energy loss by primary is: "
124            << G4endl;  //", EThreshold is: "   << 131            << G4BestUnit(fELoss, "Energy")
125     //           << G4BestUnit(fEThreshold, "E << 132            << ", primary is terminated as Eloss is >: "
126     //          << G4endl;                     << 133            << G4BestUnit(fELossRange_Min, "Energy")
                                                   >> 134            << G4endl; //", EThreshold is: "
                                                   >> 135 //           << G4BestUnit(fEThreshold, "Energy")
                                                   >> 136  //          << G4endl;
127   }                                               137   }
128                                                   138 
129   return true;                                    139   return true;
130 }                                                 140 }
131                                                   141 
132 //....oooOO0OOooo........oooOO0OOooo........oo    142 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
133                                                   143 
134 void PrimaryKiller::Initialize(G4HCofThisEvent    144 void PrimaryKiller::Initialize(G4HCofThisEvent* /*HCE*/)
135 {                                                 145 {
136   Clear();                                        146   Clear();
137 }                                                 147 }
138                                                   148 
139 //....oooOO0OOooo........oooOO0OOooo........oo    149 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
140                                                   150 
141 void PrimaryKiller::EndOfEvent(G4HCofThisEvent << 151 void PrimaryKiller::EndOfEvent(G4HCofThisEvent*)
                                                   >> 152 {
                                                   >> 153 }
142                                                   154 
143 //....oooOO0OOooo........oooOO0OOooo........oo    155 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
144                                                   156 
145 void PrimaryKiller::Clear()                       157 void PrimaryKiller::Clear()
146 {                                                 158 {
147   fELoss = 0.;                                    159   fELoss = 0.;
148 }                                                 160 }
149                                                   161 
150 //....oooOO0OOooo........oooOO0OOooo........oo    162 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
151                                                   163 
152 void PrimaryKiller::DrawAll()                     164 void PrimaryKiller::DrawAll()
153 {                                              << 165 {;}
154   ;                                            << 
155 }                                              << 
156                                                   166 
157 //....oooOO0OOooo........oooOO0OOooo........oo    167 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
158                                                   168 
159 void PrimaryKiller::PrintAll() {}              << 169 void PrimaryKiller::PrintAll()
                                                   >> 170 {}
160                                                   171 
161 //....oooOO0OOooo........oooOO0OOooo........oo    172 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
162                                                   173