Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/dna/chem4/beam.in

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

Diff markup

Differences between /examples/extended/medical/dna/chem4/beam.in (Version 11.3.0) and /examples/extended/medical/dna/chem4/beam.in (Version 10.3.p1)

  1 #/control/verbose 2                            <<   1 # $Id $
  2 #                                                   2 #
                                                   >>   3 #/control/verbose 2
  3 #/run/numberOfThreads 10                            4 #/run/numberOfThreads 10
  4 #                                              << 
  5 /process/dna/e-SolvationSubType Ritchie1994    << 
  6 #/process/dna/e-SolvationSubType Meesungnoen20 << 
  7 #/process/dna/e-SolvationSubType Terrisol1990  << 
  8 #                                              << 
  9 /run/initialize                                << 
 10                                                << 
 11 # species definition                           << 
 12 # username [ molecule | charge | D(m2/s) | Rad << 
 13 /chem/species O2 [ O2 | 0 | 2.4e-9 | 0.17 ]    << 
 14 /chem/species H3Op [ H3O | 1 | 9e-9 | 0.25 ] # << 
 15 /chem/species °OH [ °OH | 0 | 2.8e-9 | 0.22  << 
 16 /chem/species e_aq [ e_aq | -1 | 4.9e-9 | 0.5  << 
 17 /chem/species OHm [ OH | -1 | 5.0e-9 | 0.33 ]  << 
 18 /chem/species H [ H | 0 | 7e-09 | 0.19 ]       << 
 19 /chem/species H2 [ H2 | 0 | 5e-09 | 0.14 ]     << 
 20                                                << 
 21 /chem/PrintSpeciesTable                        << 
 22                                                << 
 23 # reset and activate User interfact            << 
 24 /chem/reaction/UI                              << 
 25 # totally diffusion-controlled (TDC)           << 
 26 # | Fix |  reactionRate[dm3/(mol*s)] | TDC (0) << 
 27 /chem/reaction/add H + H -> H2                 << 
 28 /chem/reaction/add e_aq + H -> H2 + OHm        << 
 29 /chem/reaction/add e_aq + e_aq -> H2 + OHm + O << 
 30 /chem/reaction/add H3Op + OHm -> H2O           << 
 31                                                     5 
 32 # partially diffusion-controlled (PDC)         <<   6 #/run/initialize
 33 # | Fix |  reactionRate[dm3/(mol*s)] | PDC (1) << 
 34 /chem/reaction/add e_aq + °OH -> OHm          << 
 35 /chem/reaction/add °OH + °OH -> H2O2         << 
 36 /chem/reaction/add e_aq + H2O2 -> OHm + °OH   << 
 37 /chem/reaction/add e_aq + H3Op -> H + H2O      << 
 38 /chem/reaction/add °OH + H -> H2O             << 
 39                                                << 
 40 /chem/reaction/print                           << 
 41                                                     7 
 42 /primaryKiller/eLossMin 1 keV # primary is kil      8 /primaryKiller/eLossMin 1 keV # primary is killed if deposited E is greater than this value
 43 /primaryKiller/eLossMax 2 keV # event is abort      9 /primaryKiller/eLossMax 2 keV # event is aborted if deposited E is greated than this value
 44 #                                              << 
 45 /gun/position  0 0 0                               10 /gun/position  0 0 0
 46 /gun/direction 0 0 1                               11 /gun/direction 0 0 1
 47 /gun/particle e-                                   12 /gun/particle e-
 48 /gun/energy 100 keV                                13 /gun/energy 100 keV
 49 #                                              <<  14 
 50 #=============================================     15 #==============================================
 51 # NB: comment lines related to scheduler when      16 # NB: comment lines related to scheduler when the flag chemOFF is used
 52 #/scheduler/verbose 2                              17 #/scheduler/verbose 2
 53 #/scheduler/whyDoYouStop                           18 #/scheduler/whyDoYouStop
 54 #/scheduler/endTime 1 microsecond              <<  19 # /scheduler/endTime 1 microsecond
 55 #=============================================     20 #==============================================
 56 #                                              <<  21 
 57 /run/beamOn 10                                     22 /run/beamOn 10