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Geant4/examples/extended/medical/DICOM/History

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Diff markup

Differences between /examples/extended/medical/DICOM/History (Version 11.3.0) and /examples/extended/medical/DICOM/History (Version 7.1.p1)


  1 # Example DICOM History                        << 
  2                                                     1 
  3 See `CONTRIBUTING.rst` for details of **requir <<   2      =========================================================
  4 which **must** added in reverse chronological  <<   3           Geant4 - DICOM example
  5 It must **not** be used as a substitute for wr <<   4      =========================================================
  6                                                     5 
  7 ---------------------------------------------- <<   6                       Category History file
  8                                                <<   7                       ---------------------
  9 ## 2024-06-05 L. T. Anh (DICOM-V11-02-00)      << 
 10 - Correct symbols for Chlorine and Potassium e << 
 11   InitialisationOfMaterials().                 << 
 12                                                << 
 13 ## 2023-12-03 A. Howard (DICOM-V11-01-02)      << 
 14 - Modified DicomDetectorConstruction: added co << 
 15   of G4PSDoseDeposit3D for nested parameterisa << 
 16   according to the fixed formula within G4PSDo << 
 17   variable to switch to standard G4PSDoseDepos << 
 18   navigation (default).                        << 
 19 - Updated README and .README to be more correc << 
 20   G4PSDoseDeposit3D and its usage for nested p << 
 21                                                << 
 22 ## 2023-11-25 C. Mancini (DICOM-V11-01-01)     << 
 23 - Modified DicomNestedPhantomParameterisation: << 
 24   from the  "G4Material* mate" instantiation.  << 
 25                                                << 
 26 ## 2023-09-02 Gabriele Cosmo (DICOM-V11-01-00) << 
 27 - Removed forward declaration for G4VTouchable << 
 28                                                << 
 29 ## 2022-10-04 John Allison (DICOM-V11-00-04)   << 
 30 - Introduce special mesh rendering of DICOM im << 
 31                                                << 
 32 ## 2022-10-24 I. Hrivnacova  (DICOM-V11-00-03) << 
 33 - Coding guidelines: start data member with 'f << 
 34   (skipped dicomReader classes).               << 
 35                                                << 
 36 ## 2022-10-04 Ben Morgan (DICOM-V11-00-02)     << 
 37 - Replace sprintf with direct G4String use to  << 
 38   macOS-13.                                    << 
 39                                                << 
 40 ## 2022-10-04 Gabriele Cosmo (DICOM-V11-00-01) << 
 41 - Fixed compilation warning on Intel-icx compi << 
 42   in DicomHandler::ReadData().                 << 
 43                                                << 
 44 ## 2021-12-10 Ben Morgan (DICOM-V11-00-00)     << 
 45 - Change to new Markdown History format.       << 
 46                                                << 
 47 ---                                            << 
 48                                                << 
 49 # History entries prior to 11.0                << 
 50                                                << 
 51 27.09.2021  Pedro Arce (DICOM-V10-07-01)       << 
 52 - Use updated interface from geomnav to use G4 << 
 53                                                << 
 54 31.12.2020 - John Allison (DICOM-V10-07-00)    << 
 55              vis.mac: "Change /vis/ogl/set/eve << 
 56              "/vis/ogl/flushAt NthPrimitive".  << 
 57                                                << 
 58 10.11.2020 - Ben Morgan (DICOM-V10-06-01)      << 
 59              Migration to G4RunManagerFactory. << 
 60                                                << 
 61 21.10.2020 - Ben Morgan (DICOM-V10-06-00)      << 
 62              Distinguish output names of archi << 
 63              fix Windows LNK1149 errors for st << 
 64              Modernize cmake version detection << 
 65              Geant4 usage.                     << 
 66                                                << 
 67 19.11.2019 - Gabriele Cosmo (DICOM-V10-05-03)  << 
 68              Fixed more cases of implicit type << 
 69              Some minor code cleanup.          << 
 70                                                << 
 71 15.11.2019 - Gabriele Cosmo (DICOM-V10-05-02)  << 
 72              Fixed cases of implicit type conv << 
 73                                                << 
 74 12.11.2019 - Gunter Folger (DICOM-V10-05-01)   << 
 75              Correct DicomHandler singleton fo << 
 76        DICOM2 was crashing                     << 
 77                                                << 
 78 08.06.2019 - Gabriele Cosmo (DICOM-V10-05-00)  << 
 79              Defaulted copy-ctr in DicomPhanto << 
 80              compilation warnings on gcc-9.1.  << 
 81                                                << 
 82 13.11.2018 - Jonathan Madsen (DICOM-V10-04-11) << 
 83              Bugfix (2102) to DicomHandler rea << 
 84                                                << 
 85 13.11.2018 - Jonathan Madsen (DICOM-V10-04-10) << 
 86              Bugfix (2101) to DicomHandler ski << 
 87                                                << 
 88 12.11.2018 - Jonathan Madsen (DICOM-V10-04-09) << 
 89              Updated DICOMUtilities.cmake to h << 
 90              Using modern CMake DICOM::target  << 
 91                                                << 
 92 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-08)  << 
 93              DicomDetectorConstruction: remove << 
 94              method.                           << 
 95                                                << 
 96 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-07)  << 
 97              DicomPartialDetectorConstruction: << 
 98              data for 'fMateIDs'. Fixed type c << 
 99                                                << 
100 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-06)  << 
101              DicomNestedPhantomParameterisatio << 
102              causing compilation error on Linu << 
103                                                << 
104 10.11.2018 - Jonathan Madsen (DICOM-V10-04-05) << 
105              DICOMConfig.cmake.in handles DICO << 
106              DownloadDICOMData.cmake does inst << 
107              CMakeLists.txt creates build-tree << 
108              DicomDetectorConstruction is glob << 
109              DicomHandler implements GetDicomD << 
110                which provides a fallback path  << 
111                directory for DICOM2 and handle << 
112              Phantom parameterization classes  << 
113                specifying color file           << 
114              fDcmrun is protected instead of p << 
115              DicomEventAction doesn't print ev << 
116              Removed DicomRun::RecordEvent inc << 
117                (done by G4Run::RecordEvent)    << 
118              Cleaned up output (when provided  << 
119                it was too excessive) now just  << 
120                and per-voxel is output to file << 
121              Moved Data.dat to Data.dat.old an << 
122                Data.dat.{old,new} to Data.dat  << 
123                on DICOM_USE_DCMTK setting      << 
124              Updated README                    << 
125                                                << 
126 09.11.2018 - Gabriele Cosmo (DICOM-V10-04-04)  << 
127              Use canonical definition for DICO << 
128              singleton specification (in any c << 
129                                                << 
130 22.06.2018 - Jonathan Madsen (DICOM-V10-04-03) << 
131              Added dicomReader/cmake/DICOMUtil << 
132              a DICOM_BUILD_LIBRARY macro which << 
133              DICOM-library (and dicomReader li << 
134              based on the Geant4 installation  << 
135              both) + updates to DICOMConfig.cm << 
136              dicomReaderConfig.cmake.in to han << 
137              use link to                       << 
138                                                << 
139 20.05.2018 - John Allison (DICOM-V10-04-02)    << 
140              Remove G4UI_USE and G4VIS_USE.    << 
141              Move instantiation of G4UIExecuti << 
142                                                << 
143 09.05.2018 - Ben Morgan (DICOM-V10-04-01)      << 
144              Include G4Types before use of G4M << 
145              compatibility with move to #defin << 
146              symbols.                          << 
147                                                << 
148 20.03.2018 - Jonathan Madsen (DICOM-V10-04-00) << 
149              Enabled CMake package configurati << 
150              Added DICOM_USE_DCMTK and DICOM_U << 
151               options back-compat with environ << 
152              Updated README and .README.txt    << 
153                                                << 
154 11.11.2017 - Marc Verderi (DICOM-V10-03-12)    << 
155              Retag as DICOM-V10-03-11 too quic << 
156                                                << 
157 09.11.2017 - Ivana Hrivnacova (DICOM-V10-03-11 << 
158              Updated DICOM data version to 1.1 << 
159                                                << 
160 09.11.2017 - S. Guatelli (DICOM-V10-03-10)     << 
161              Updated README and .README.txt    << 
162                                                << 
163 09.11.2017 - S. Guatelli (DICOM-V10-03-09)     << 
164              .g4dmc created in the user direct << 
165              together with the .g4dcmb files.  << 
166                                                << 
167 09.11.2017 - S. Guatelli (DICOM-V10-03-08)     << 
168              DICOM_PATH changed                << 
169              no writing .g4dcmb in the library << 
170                                                << 
171 08.11.2017 - Ivana Hrivnacova (DICOM-V10-03-07 << 
172              Added downloading DICOM data in C << 
173              (used only with DICOM_USE_HEAD op << 
174                                                << 
175 07.11.2017 - S. Guatelli (DICOM-V10-03-06).    << 
176              Warning deleted, updated README a << 
177                                                << 
178 01.11.2017 - S. Guatelli (DICOM-V10-03-05).    << 
179              DICOM_HEAD library can be used as << 
180              DICOM_v1 does not need to be copi << 
181                                                << 
182 01.11.2017 - S. Guatelli (DICOM-V10-03-04). DI << 
183                                                << 
184 28.09.2017 - S. Guatelli (DICOM-V10-03-03). DI << 
185                                                << 
186 16.09.2017 - S. Guatelli (DICOM-V10-03-02)     << 
187            - New DICOM Digital Head included b << 
188            - Updated README, .README.txt       << 
189                                                << 
190 19.11.2016 - Andrea Dotti     (DICOM-V10-02-04 << 
191            - explicit set of SD to manager     << 
192                                                << 
193 11.11.2016 - Ivana Hrivnacova (DICOM-V10-02-03 << 
194            - Removed extra compiler flags in G << 
195              (not needed)                      << 
196            - Renamed G4_USE_DCMTK in DICOM_USE << 
197            - Updated README, .README.txt       << 
198                                                << 
199 11.11.2016 - Pedro Arce (DICOM-V10-02-02)      << 
200            - Complying with Geant4 guidelines  << 
201                                                << 
202 04.11.2016 - Pedro Arce (DICOM-V10-02-01)      << 
203            - New DICOM reader based on DCMTK   << 
204                                                << 
205 20.07.2016 - Ivana Hrivnacova (DICOM-V10-02-00 << 
206            - Fixed coding guidelines           << 
207              (redundant empty lines, class dat << 
208                                                << 
209 17.09.2015 - Pedro Arce (DICOM-V10-01-01)      << 
210            - Fixed coding guidelines (long lin << 
211                                                << 
212 21.10.2014 - Pedro Arce (DICOM-V10-00-04)      << 
213            - Fixed coding guidelines (long lin << 
214                                                << 
215 16.10.2014 - Ivana Hrivnacova (DICOM-V10-00-03 << 
216            - Fixed coding guidelines (long lin << 
217              DicomPartialDetectorConstruction. << 
218                                                << 
219 29.07.2014 - Pedro Arce (DICOM-V10-00-02)      << 
220            - Remove DicomPhysicsList           << 
221                                                << 
222 25.07.2014 - Pedro Arce (DICOM-V10-00-01)      << 
223            - Using G4GenericPhysicsList        << 
224          - no std::cout                        << 
225      - no exit()                               << 
226                                                << 
227 03.12.2013 - Gabriele Cosmo (DICOM-V10-00-00)  << 
228            - Attempt to fix Valgrind run-time  << 
229              DicomHandler::CheckFileFormat().  << 
230                                                << 
231 03.12.2013 - Ivana Hrivnacova (DICOM-V09-06-09 << 
232            - Updated README and .README to mat << 
233                                                << 
234 18.11.2014 - Ivana Hrivnacova (DICOM-V09-06-08 << 
235            - Fixed DicomPhantomZSliceMerged.hh << 
236              (for Doxygen)                     << 
237                                                << 
238 13.11.2014 - Jonathan Mdsen (DICOM-V09-06-07)  << 
239            - Updated README and .README        << 
240            - Fixed some comments               << 
241                                                << 
242 04.11.2013 - Dennis Wright  (DICOM-V09-06-06)  << 
243            - replaced LEP model for alphas by  << 
244              zero energy                       << 
245            - updated sample output files to re << 
246                                                << 
247 23.10.2013 - Gabriele Cosmo (DICOM-V09-06-05)  << 
248      - Fixed compilation warnings.             << 
249                                                << 
250 15.10.2013 - Jonathan Madsen (DICOM-V09-06-04) << 
251      - Modified DICOM to enable multithreading << 
252        - Adapted scorers                       << 
253        - Added ActionInitialization class      << 
254        - Modified RunAction to handle master a << 
255                                                << 
256 09.10.2013 - Ivana Hrivnacova (DICOM-V09-06-03 << 
257            Fixed file description (DicomPhanto << 
258                                                << 
259 28.08.2013 - Gabriele Cosmo (DICOM-V09-06-02)  << 
260            Added G4Ellipsoid to solids enabled << 
261            DicomNestedPhantomParameterisation. << 
262                                                << 
263 29.07.2013 - Peter Gumplinger (DICOM-V09-06-01 << 
264            Fixed MAC/clang32 compilation warni << 
265            DiconIntersectVolume classes        << 
266                                                << 
267 18.07.2013 - Jonathan Madsen                   << 
268            Missing documentation update from 1 << 
269              Improvements and bug-fixes ->     << 
270              DicomHandler had some bugs when u << 
271                other than examples provided    << 
272              Added DicomPhantomZSliceMerged cl << 
273                inconsistencies in DCM file met << 
274              DicomPhantomZSliceHeader class is << 
275                and material ID data and the pr << 
276                to files instead of DicomHandle << 
277            Removed additions on 16.07.2013 pen << 
278            Reverted DICOM example to 18.12.201 << 
279              minor tweaks                      << 
280            Kept share folder with additional a << 
281              and additional data files (SixSli << 
282              these files with Data.dat to use  << 
283            Kept CMakeLists.txt to copy over ex << 
284              DCM files                         << 
285                                                << 
286 16.07.2013 - Jonathan Madsen                   << 
287            Many modifications to the DICOM exa << 
288            Added more anonymous DICOM files.   << 
289            Added more script configurations.   << 
290            Added DicomCommandLineOptions, Dico << 
291              DicomOption as part of a command  << 
292            Modified CMakeLists.txt to configur << 
293            Added capability to use different d << 
294              CT2Density file, ColourMap file.  << 
295            Added Statistical Analysis and Stat << 
296            Miscellaneous improvements.         << 
297            DICOM.cc now has a large list of ru << 
298              via command line.                 << 
299            Options set at command line are set << 
300              variables.                        << 
301                                                << 
302 15.02.2013 - Ivana Hrivnacova (DICOM-V09-06-00 << 
303            Applied coding guidelines (virtual  << 
304            names and initialization)           << 
305                                                << 
306 07.11.2012 - Gabriele Cosmo (DICOM-V09-05-10)  << 
307            Fixed compilation warnings for shad << 
308            return flag from system calls.      << 
309                                                << 
310 18.10.2012 - Ivana Hrivnacova (DICOM-V09-05-09 << 
311      Updated CMakeLists.txt: added copying dat << 
312            area as they are needed to run the  << 
313                                                << 
314 13.10.2012 - Andrea Dotti (DICOM-V09-05-08)    << 
315      Removing previous tag modification (not n << 
316                                                << 
317 13.10.2012 - Andrea Dotti (DICOM-V09-05-07)    << 
318        Adding explicit use of system of units  << 
319                                                << 
320 05.09.2012 - Ivana Hrivnacova (DICOM-V09-05-06 << 
321              Fixed compiler warning            << 
322                                                << 
323 04.09.2012 - Pedro Arce    (DICOM-V09-05-05)   << 
324              Remove old renamed files          << 
325              Updated CMakeLists.txt (By I.Hriv << 
326              Adding visualization, copying mac << 
327              comment lines                     << 
328                                                << 
329 17.07.2012 - Ivana Hrivnacova (DICOM-V09-05-04 << 
330              Improved README files             << 
331                                                << 
332 06.07.2012 - Pedro Arce    (DICOM-V09-05-03)   << 
333              Reviewed examples according to co << 
334                                                << 
335 13.06.2012 - Gabriele Cosmo   (DICOM-V09-05-02 << 
336              Assign return value for fread() a << 
337              DicomHandler. Fixes compilation w << 
338                                                << 
339 28.03.2012 - Pedro Arce   (DICOM-V09-05-01)    << 
340              Corrections in materials Z/A. Add << 
341                                                << 
342 13.11.2011 - Pedro Arce   (DICOM-V09-04-03)    << 
343              Migration to new G4Exception sche << 
344                                                << 
345 03.10.2011 - G.Folger   (DICOM-V09-04-02)      << 
346              Fix gcc46 compilation warning in  << 
347              and DicomPhantomParameterisationC << 
348                                                << 
349 05.06.2011 - Pedro Arce (DICOM-V09-04-01)      << 
350              Corrected name for sensitive dete << 
351              named as "phantomSD" in DicomRunA << 
352              report #1210.                     << 
353              Corrected axis slicing hint in ne << 
354                                                << 
355 23.12.2010 - Stephane Chauvie                  << 
356              Corrected 2 bugs in DicomHandler  << 
357                                                << 
358 30.11.2010 - John Allison                      << 
359              dicom.cc: Removed redundant heade << 
360              "G4UIterminal.hh" and "G4UItcsh.h << 
361                                                << 
362 30.11.2010 - Ivana Hrivnacova (DICOM-V09-03-09 << 
363              Moved inclusion of vis headers as << 
364                                                << 
365 26.11.2010 - Pedro Arce (DICOM-V09-03-08)      << 
366        Correction of warnings                  << 
367                                                << 
368 24.11.2010 - Pedro Arce (DICOM-V09-03-07)      << 
369        Introduced partial phantom example      << 
370        Delete G4PSDoseDeposit_RegNav and use G << 
371                                                << 
372 11.11.2010 - Gabriele Cosmo (DICOM-V09-03-06)  << 
373              Corrected vis.mac macro and set O << 
374              Corrected some printouts in code. << 
375                                                << 
376 09.11.2010 - Gabriele Cosmo (DICOM-V09-03-05)  << 
377              Fixed compilation warning on virt << 
378              Fixed compilation warnings in Dic << 
379              and DicomHandler.                 << 
380                                                << 
381 02.11.2010 - John Allison (DICOM-V09-03-04)    << 
382              Introduced G4UIExecutive.         << 
383                                                << 
384 06.06.2010 - Joseph Perl (DICOM-V09-03-03)     << 
385        Remove unused variable in EventAction   << 
386                                                << 
387 03.06.2010 - Joseph Perl (DICOM-V09-03-02)     << 
388        Updated vis usage                       << 
389                                                << 
390 19.11.2009 - StÈphane Chauvie (DICOM-V09-03-0 << 
391 01.06.2010 - Stephane Chauvie - Andrea Armando << 
392        Added function to read nested items (de << 
393        Removed dependencies on CONQUEST        << 
394        DICOM handler could now read whichever  << 
395              (PT,CT,DR,CR,US,MR... )           << 
396                                                << 
397 19.11.2009 - Stephanee Chauvie (DICOM-V09-02-0 << 
398        Changed DICOM Handler to read CT files  << 
399              DICOM server                      << 
400                                                << 
401 05.02.2009 - Pedro Arce (DICOM-V09-02-01)      << 
402              Added report on dose per voxel.   << 
403              Added warning for erroneous inclu << 
404              release 9.2 (to be removed when f << 
405                                                << 
406 27.01.2009 - Gabriele Cosmo (DICOM-V09-02-00)  << 
407              Use new class G4RegularNavigation << 
408              lengths in voxels of the regular  << 
409                                                << 
410 27.11.2008 - Pedro Arce (DICOM-V09-01-02)      << 
411              Included G4PSDoseDeposit_RegNav t << 
412        including msc and energy loss correctio << 
413        skipping voxel with equal materials whe << 
414        navigation                              << 
415                                                << 
416 21.07.2008 - Pedro Arce (DICOM-V09-01-01)      << 
417              Bug fix in DicomNestedPhantomPara << 
418              'copyNo', so that material assign << 
419              Set default cut to 1 mm (with pre << 
420              spent on physics and no improveme << 
421              navigation options).              << 
422              Corrected direction and position  << 
423              they traverse the DICOM voxels.   << 
424                                                << 
425 22.01.2008 - Pedro Arce (DICOM-V09-01-00)      << 
426              Do not use 'rindex' in DicomHandl << 
427              on Windows.                       << 
428                                                << 
429 06.12.2007 - Pedro Arce                        << 
430              Added voxel colouring by material << 
431                                                << 
432 05.12.2007 - Pedro Arce                        << 
433              Deep review on the input files an << 
434              Use of G4PhantomParameterisation  << 
435                                                << 
436 06.12.2005 - Gabriele Cosmo                    << 
437              Trivial changes for support of CL << 
438                                                << 
439 29.11.2005 - Susanna Guatelli (DICOM-V07-01-00 << 
440              Documentation update              << 
441                                                     8 
442 12.06.2005 - Stephane Chauvie (DICOM-V07-00-01      9 12.06.2005 - Stephane Chauvie (DICOM-V07-00-01)
443              Added improvement by Akinori Kimu     10              Added improvement by Akinori Kimura.
444                                                    11 
445 03.05.2005 - John Allison                          12 03.05.2005 - John Allison
446              Replaced vis manager with G4VisEx     13              Replaced vis manager with G4VisExecutive.
447                                                    14 
448 10.12.2004 - Maria Grazia Pia (DICOM-V06-02-02     15 10.12.2004 - Maria Grazia Pia (DICOM-V06-02-02)
449              Update README to announce further     16              Update README to announce further improvements and fixes
450              by Akinori Kimura.                    17              by Akinori Kimura.
451                                                    18 
452 3.12.2004 - Gabriele Cosmo (DICOM-V06-02-01)       19 3.12.2004 - Gabriele Cosmo (DICOM-V06-02-01)
453             Implemented migration to <cmath>.      20             Implemented migration to <cmath>.
454                                                    21 
455 13.5.2004 - Susanna Guatelli                       22 13.5.2004 - Susanna Guatelli
456             updated compiler: gcc3.2.3             23             updated compiler: gcc3.2.3
457                                                    24 
458 11.3.2003 - Susanna Guatelli                       25 11.3.2003 - Susanna Guatelli
459             README changed                         26             README changed
460                                                    27 
461 6.2003 - Susanna Guatelli                          28 6.2003 - Susanna Guatelli
462          First public release of the example       29          First public release of the example