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Geant4/examples/extended/medical/DICOM/History

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Diff markup

Differences between /examples/extended/medical/DICOM/History (Version 11.3.0) and /examples/extended/medical/DICOM/History (Version 11.0.p2)


  1 # Example DICOM History                        <<   1 -------------------------------------------------------------------
  2                                                     2 
  3 See `CONTRIBUTING.rst` for details of **requir <<   3      =========================================================
  4 which **must** added in reverse chronological  <<   4           Geant4 - DICOM example
  5 It must **not** be used as a substitute for wr <<   5      =========================================================
  6                                                << 
  7 ---------------------------------------------- << 
  8                                                << 
  9 ## 2024-06-05 L. T. Anh (DICOM-V11-02-00)      << 
 10 - Correct symbols for Chlorine and Potassium e << 
 11   InitialisationOfMaterials().                 << 
 12                                                << 
 13 ## 2023-12-03 A. Howard (DICOM-V11-01-02)      << 
 14 - Modified DicomDetectorConstruction: added co << 
 15   of G4PSDoseDeposit3D for nested parameterisa << 
 16   according to the fixed formula within G4PSDo << 
 17   variable to switch to standard G4PSDoseDepos << 
 18   navigation (default).                        << 
 19 - Updated README and .README to be more correc << 
 20   G4PSDoseDeposit3D and its usage for nested p << 
 21                                                << 
 22 ## 2023-11-25 C. Mancini (DICOM-V11-01-01)     << 
 23 - Modified DicomNestedPhantomParameterisation: << 
 24   from the  "G4Material* mate" instantiation.  << 
 25                                                << 
 26 ## 2023-09-02 Gabriele Cosmo (DICOM-V11-01-00) << 
 27 - Removed forward declaration for G4VTouchable << 
 28                                                << 
 29 ## 2022-10-04 John Allison (DICOM-V11-00-04)   << 
 30 - Introduce special mesh rendering of DICOM im << 
 31                                                << 
 32 ## 2022-10-24 I. Hrivnacova  (DICOM-V11-00-03) << 
 33 - Coding guidelines: start data member with 'f << 
 34   (skipped dicomReader classes).               << 
 35                                                << 
 36 ## 2022-10-04 Ben Morgan (DICOM-V11-00-02)     << 
 37 - Replace sprintf with direct G4String use to  << 
 38   macOS-13.                                    << 
 39                                                << 
 40 ## 2022-10-04 Gabriele Cosmo (DICOM-V11-00-01) << 
 41 - Fixed compilation warning on Intel-icx compi << 
 42   in DicomHandler::ReadData().                 << 
 43                                                << 
 44 ## 2021-12-10 Ben Morgan (DICOM-V11-00-00)     << 
 45 - Change to new Markdown History format.       << 
 46                                                << 
 47 ---                                            << 
 48                                                << 
 49 # History entries prior to 11.0                << 
 50                                                     6 
                                                   >>   7                       Category History file
 51 27.09.2021  Pedro Arce (DICOM-V10-07-01)            8 27.09.2021  Pedro Arce (DICOM-V10-07-01)
 52 - Use updated interface from geomnav to use G4      9 - Use updated interface from geomnav to use G4PhantomParameterisation::GetNoVoxels instead of GetNoVoxel
 53                                                    10 
 54 31.12.2020 - John Allison (DICOM-V10-07-00)        11 31.12.2020 - John Allison (DICOM-V10-07-00)
 55              vis.mac: "Change /vis/ogl/set/eve     12              vis.mac: "Change /vis/ogl/set/eventsDrawInterval" to
 56              "/vis/ogl/flushAt NthPrimitive".      13              "/vis/ogl/flushAt NthPrimitive".
 57                                                    14 
 58 10.11.2020 - Ben Morgan (DICOM-V10-06-01)          15 10.11.2020 - Ben Morgan (DICOM-V10-06-01)
 59              Migration to G4RunManagerFactory.     16              Migration to G4RunManagerFactory.
 60                                                    17 
 61 21.10.2020 - Ben Morgan (DICOM-V10-06-00)          18 21.10.2020 - Ben Morgan (DICOM-V10-06-00)
 62              Distinguish output names of archi     19              Distinguish output names of archive lib from DLL and application to
 63              fix Windows LNK1149 errors for st     20              fix Windows LNK1149 errors for static libs.
 64              Modernize cmake version detection     21              Modernize cmake version detection and policy setting to follow main
 65              Geant4 usage.                         22              Geant4 usage.
 66                                                    23 
 67 19.11.2019 - Gabriele Cosmo (DICOM-V10-05-03)      24 19.11.2019 - Gabriele Cosmo (DICOM-V10-05-03)
 68              Fixed more cases of implicit type     25              Fixed more cases of implicit type conversions.
 69              Some minor code cleanup.              26              Some minor code cleanup.
 70                                                    27 
 71 15.11.2019 - Gabriele Cosmo (DICOM-V10-05-02)      28 15.11.2019 - Gabriele Cosmo (DICOM-V10-05-02)
 72              Fixed cases of implicit type conv     29              Fixed cases of implicit type conversions from size_t to G4int.
 73                                                    30 
 74 12.11.2019 - Gunter Folger (DICOM-V10-05-01)       31 12.11.2019 - Gunter Folger (DICOM-V10-05-01)
 75              Correct DicomHandler singleton fo     32              Correct DicomHandler singleton for use on Windows.
 76        DICOM2 was crashing                         33        DICOM2 was crashing
 77                                                    34 
 78 08.06.2019 - Gabriele Cosmo (DICOM-V10-05-00)      35 08.06.2019 - Gabriele Cosmo (DICOM-V10-05-00)
 79              Defaulted copy-ctr in DicomPhanto     36              Defaulted copy-ctr in DicomPhantomZSliceHeader, to fix deprecation
 80              compilation warnings on gcc-9.1.      37              compilation warnings on gcc-9.1.
 81                                                    38 
 82 13.11.2018 - Jonathan Madsen (DICOM-V10-04-11)     39 13.11.2018 - Jonathan Madsen (DICOM-V10-04-11)
 83              Bugfix (2102) to DicomHandler rea     40              Bugfix (2102) to DicomHandler reading fPixelSpacingY
 84                                                    41 
 85 13.11.2018 - Jonathan Madsen (DICOM-V10-04-10)     42 13.11.2018 - Jonathan Madsen (DICOM-V10-04-10)
 86              Bugfix (2101) to DicomHandler ski     43              Bugfix (2101) to DicomHandler skipping 2 bytes in implicit VR
 87                                                    44 
 88 12.11.2018 - Jonathan Madsen (DICOM-V10-04-09)     45 12.11.2018 - Jonathan Madsen (DICOM-V10-04-09)
 89              Updated DICOMUtilities.cmake to h     46              Updated DICOMUtilities.cmake to handle Windows builds
 90              Using modern CMake DICOM::target      47              Using modern CMake DICOM::target library alias
 91                                                    48 
 92 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-08)      49 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-08)
 93              DicomDetectorConstruction: remove     50              DicomDetectorConstruction: removed useless static Instance()
 94              method.                               51              method.
 95                                                    52 
 96 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-07)      53 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-07)
 97              DicomPartialDetectorConstruction:     54              DicomPartialDetectorConstruction: fixed shadowing of base class
 98              data for 'fMateIDs'. Fixed type c     55              data for 'fMateIDs'. Fixed type conversion unsigned_int -> int.
 99                                                    56 
100 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-06)      57 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-06)
101              DicomNestedPhantomParameterisatio     58              DicomNestedPhantomParameterisation: removed useless statement
102              causing compilation error on Linu     59              causing compilation error on Linux.
103                                                    60 
104 10.11.2018 - Jonathan Madsen (DICOM-V10-04-05)     61 10.11.2018 - Jonathan Madsen (DICOM-V10-04-05)
105              DICOMConfig.cmake.in handles DICO     62              DICOMConfig.cmake.in handles DICOM_USE_HEAD being set
106              DownloadDICOMData.cmake does inst     63              DownloadDICOMData.cmake does installation
107              CMakeLists.txt creates build-tree     64              CMakeLists.txt creates build-tree export
108              DicomDetectorConstruction is glob     65              DicomDetectorConstruction is globally accessible
109              DicomHandler implements GetDicomD     66              DicomHandler implements GetDicomData{Path,File}
110                which provides a fallback path      67                which provides a fallback path to data libraries
111                directory for DICOM2 and handle     68                directory for DICOM2 and handles DICOM_USE_HEAD situation
112              Phantom parameterization classes      69              Phantom parameterization classes take an argument
113                specifying color file               70                specifying color file
114              fDcmrun is protected instead of p     71              fDcmrun is protected instead of private (for DICOM2)
115              DicomEventAction doesn't print ev     72              DicomEventAction doesn't print every event
116              Removed DicomRun::RecordEvent inc     73              Removed DicomRun::RecordEvent incrementing numberOfEvent
117                (done by G4Run::RecordEvent)        74                (done by G4Run::RecordEvent)
118              Cleaned up output (when provided      75              Cleaned up output (when provided along with DICOM2 output
119                it was too excessive) now just      76                it was too excessive) now just a summary is provided
120                and per-voxel is output to file     77                and per-voxel is output to file only
121              Moved Data.dat to Data.dat.old an     78              Moved Data.dat to Data.dat.old and CMake copies correct
122                Data.dat.{old,new} to Data.dat      79                Data.dat.{old,new} to Data.dat in binary directory based
123                on DICOM_USE_DCMTK setting          80                on DICOM_USE_DCMTK setting
124              Updated README                        81              Updated README
125                                                    82 
126 09.11.2018 - Gabriele Cosmo (DICOM-V10-04-04)      83 09.11.2018 - Gabriele Cosmo (DICOM-V10-04-04)
127              Use canonical definition for DICO     84              Use canonical definition for DICOMRunAction; removed wrong
128              singleton specification (in any c     85              singleton specification (in any case not necessary).
129                                                    86 
130 22.06.2018 - Jonathan Madsen (DICOM-V10-04-03)     87 22.06.2018 - Jonathan Madsen (DICOM-V10-04-03)
131              Added dicomReader/cmake/DICOMUtil     88              Added dicomReader/cmake/DICOMUtilities.cmake that defines
132              a DICOM_BUILD_LIBRARY macro which     89              a DICOM_BUILD_LIBRARY macro which handles how to build
133              DICOM-library (and dicomReader li     90              DICOM-library (and dicomReader library if USE_DICOM_DCMTK=ON)
134              based on the Geant4 installation      91              based on the Geant4 installation (e.g. build shared, static, or
135              both) + updates to DICOMConfig.cm     92              both) + updates to DICOMConfig.cmake.in and
136              dicomReaderConfig.cmake.in to han     93              dicomReaderConfig.cmake.in to handle which library type to
137              use link to                           94              use link to
138                                                    95 
139 20.05.2018 - John Allison (DICOM-V10-04-02)        96 20.05.2018 - John Allison (DICOM-V10-04-02)
140              Remove G4UI_USE and G4VIS_USE.        97              Remove G4UI_USE and G4VIS_USE.
141              Move instantiation of G4UIExecuti     98              Move instantiation of G4UIExecutive to start of main.
142                                                    99 
143 09.05.2018 - Ben Morgan (DICOM-V10-04-01)         100 09.05.2018 - Ben Morgan (DICOM-V10-04-01)
144              Include G4Types before use of G4M    101              Include G4Types before use of G4MULTITHREADED. For forward
145              compatibility with move to #defin    102              compatibility with move to #defines over -D for G4 preprocessor
146              symbols.                             103              symbols.
147                                                   104 
148 20.03.2018 - Jonathan Madsen (DICOM-V10-04-00)    105 20.03.2018 - Jonathan Madsen (DICOM-V10-04-00)
149              Enabled CMake package configurati    106              Enabled CMake package configuration
150              Added DICOM_USE_DCMTK and DICOM_U    107              Added DICOM_USE_DCMTK and DICOM_USE_HEAD CMake
151               options back-compat with environ    108               options back-compat with environment variables
152              Updated README and .README.txt       109              Updated README and .README.txt
153                                                   110 
154 11.11.2017 - Marc Verderi (DICOM-V10-03-12)       111 11.11.2017 - Marc Verderi (DICOM-V10-03-12)
155              Retag as DICOM-V10-03-11 too quic    112              Retag as DICOM-V10-03-11 too quickly rejected
156                                                   113 
157 09.11.2017 - Ivana Hrivnacova (DICOM-V10-03-11    114 09.11.2017 - Ivana Hrivnacova (DICOM-V10-03-11)
158              Updated DICOM data version to 1.1    115              Updated DICOM data version to 1.1
159                                                   116 
160 09.11.2017 - S. Guatelli (DICOM-V10-03-10)        117 09.11.2017 - S. Guatelli (DICOM-V10-03-10)
161              Updated README and .README.txt       118              Updated README and .README.txt
162                                                   119 
163 09.11.2017 - S. Guatelli (DICOM-V10-03-09)        120 09.11.2017 - S. Guatelli (DICOM-V10-03-09)
164              .g4dmc created in the user direct    121              .g4dmc created in the user directory and not in the DICOM library,
165              together with the .g4dcmb files.     122              together with the .g4dcmb files.
166                                                   123 
167 09.11.2017 - S. Guatelli (DICOM-V10-03-08)        124 09.11.2017 - S. Guatelli (DICOM-V10-03-08)
168              DICOM_PATH changed                   125              DICOM_PATH changed
169              no writing .g4dcmb in the library    126              no writing .g4dcmb in the library DICOM
170                                                   127 
171 08.11.2017 - Ivana Hrivnacova (DICOM-V10-03-07    128 08.11.2017 - Ivana Hrivnacova (DICOM-V10-03-07)
172              Added downloading DICOM data in C    129              Added downloading DICOM data in CMake build
173              (used only with DICOM_USE_HEAD op    130              (used only with DICOM_USE_HEAD option)
174                                                   131 
175 07.11.2017 - S. Guatelli (DICOM-V10-03-06).       132 07.11.2017 - S. Guatelli (DICOM-V10-03-06).
176              Warning deleted, updated README a    133              Warning deleted, updated README and .README.txt
177                                                   134 
178 01.11.2017 - S. Guatelli (DICOM-V10-03-05).       135 01.11.2017 - S. Guatelli (DICOM-V10-03-05).
179              DICOM_HEAD library can be used as    136              DICOM_HEAD library can be used as input to the DICOM
180              DICOM_v1 does not need to be copi    137              DICOM_v1 does not need to be copied in the directory where the simulation is executed
181                                                   138 
182 01.11.2017 - S. Guatelli (DICOM-V10-03-04). DI    139 01.11.2017 - S. Guatelli (DICOM-V10-03-04). DICOM_HEAD library can be used as input to the DICOM
183                                                   140 
184 28.09.2017 - S. Guatelli (DICOM-V10-03-03). DI    141 28.09.2017 - S. Guatelli (DICOM-V10-03-03). DICOM_HEAD Directory deleted
185                                                   142 
186 16.09.2017 - S. Guatelli (DICOM-V10-03-02)        143 16.09.2017 - S. Guatelli (DICOM-V10-03-02)
187            - New DICOM Digital Head included b    144            - New DICOM Digital Head included by S. Guatelli
188            - Updated README, .README.txt          145            - Updated README, .README.txt
189                                                   146 
190 19.11.2016 - Andrea Dotti     (DICOM-V10-02-04    147 19.11.2016 - Andrea Dotti     (DICOM-V10-02-04)
191            - explicit set of SD to manager        148            - explicit set of SD to manager
192                                                   149 
193 11.11.2016 - Ivana Hrivnacova (DICOM-V10-02-03    150 11.11.2016 - Ivana Hrivnacova (DICOM-V10-02-03)
194            - Removed extra compiler flags in G    151            - Removed extra compiler flags in GNUmakefile, CMakeLists.txt
195              (not needed)                         152              (not needed)
196            - Renamed G4_USE_DCMTK in DICOM_USE    153            - Renamed G4_USE_DCMTK in DICOM_USE_DCMTK
197            - Updated README, .README.txt          154            - Updated README, .README.txt
198                                                   155 
199 11.11.2016 - Pedro Arce (DICOM-V10-02-02)         156 11.11.2016 - Pedro Arce (DICOM-V10-02-02)
200            - Complying with Geant4 guidelines     157            - Complying with Geant4 guidelines in data variables
201                                                   158 
202 04.11.2016 - Pedro Arce (DICOM-V10-02-01)         159 04.11.2016 - Pedro Arce (DICOM-V10-02-01)
203            - New DICOM reader based on DCMTK      160            - New DICOM reader based on DCMTK
204                                                   161 
205 20.07.2016 - Ivana Hrivnacova (DICOM-V10-02-00    162 20.07.2016 - Ivana Hrivnacova (DICOM-V10-02-00)
206            - Fixed coding guidelines              163            - Fixed coding guidelines
207              (redundant empty lines, class dat    164              (redundant empty lines, class data member names)
208                                                   165 
209 17.09.2015 - Pedro Arce (DICOM-V10-01-01)         166 17.09.2015 - Pedro Arce (DICOM-V10-01-01)
210            - Fixed coding guidelines (long lin    167            - Fixed coding guidelines (long lines)
211                                                   168 
212 21.10.2014 - Pedro Arce (DICOM-V10-00-04)         169 21.10.2014 - Pedro Arce (DICOM-V10-00-04)
213            - Fixed coding guidelines (long lin    170            - Fixed coding guidelines (long lines)
214                                                   171 
215 16.10.2014 - Ivana Hrivnacova (DICOM-V10-00-03    172 16.10.2014 - Ivana Hrivnacova (DICOM-V10-00-03)
216            - Fixed coding guidelines (long lin    173            - Fixed coding guidelines (long lines) in
217              DicomPartialDetectorConstruction.    174              DicomPartialDetectorConstruction.hh, DicomPhantomZSliceHeader.hh
218                                                   175 
219 29.07.2014 - Pedro Arce (DICOM-V10-00-02)         176 29.07.2014 - Pedro Arce (DICOM-V10-00-02)
220            - Remove DicomPhysicsList              177            - Remove DicomPhysicsList
221                                                   178 
222 25.07.2014 - Pedro Arce (DICOM-V10-00-01)         179 25.07.2014 - Pedro Arce (DICOM-V10-00-01)
223            - Using G4GenericPhysicsList           180            - Using G4GenericPhysicsList
224          - no std::cout                           181          - no std::cout
225      - no exit()                                  182      - no exit()
226                                                   183 
227 03.12.2013 - Gabriele Cosmo (DICOM-V10-00-00)     184 03.12.2013 - Gabriele Cosmo (DICOM-V10-00-00)
228            - Attempt to fix Valgrind run-time     185            - Attempt to fix Valgrind run-time error from printout in
229              DicomHandler::CheckFileFormat().     186              DicomHandler::CheckFileFormat().
230                                                   187 
231 03.12.2013 - Ivana Hrivnacova (DICOM-V09-06-09    188 03.12.2013 - Ivana Hrivnacova (DICOM-V09-06-09)
232            - Updated README and .README to mat    189            - Updated README and .README to match (Pedro Arce)
233                                                   190 
234 18.11.2014 - Ivana Hrivnacova (DICOM-V09-06-08    191 18.11.2014 - Ivana Hrivnacova (DICOM-V09-06-08)
235            - Fixed DicomPhantomZSliceMerged.hh    192            - Fixed DicomPhantomZSliceMerged.hh file description
236              (for Doxygen)                        193              (for Doxygen)
237                                                   194 
238 13.11.2014 - Jonathan Mdsen (DICOM-V09-06-07)     195 13.11.2014 - Jonathan Mdsen (DICOM-V09-06-07)
239            - Updated README and .README           196            - Updated README and .README
240            - Fixed some comments                  197            - Fixed some comments
241                                                   198 
242 04.11.2013 - Dennis Wright  (DICOM-V09-06-06)     199 04.11.2013 - Dennis Wright  (DICOM-V09-06-06)
243            - replaced LEP model for alphas by     200            - replaced LEP model for alphas by extending Binary cascade to
244              zero energy                          201              zero energy
245            - updated sample output files to re    202            - updated sample output files to reflect this
246                                                   203 
247 23.10.2013 - Gabriele Cosmo (DICOM-V09-06-05)     204 23.10.2013 - Gabriele Cosmo (DICOM-V09-06-05)
248      - Fixed compilation warnings.                205      - Fixed compilation warnings.
249                                                   206 
250 15.10.2013 - Jonathan Madsen (DICOM-V09-06-04)    207 15.10.2013 - Jonathan Madsen (DICOM-V09-06-04)
251      - Modified DICOM to enable multithreading    208      - Modified DICOM to enable multithreading
252        - Adapted scorers                          209        - Adapted scorers
253        - Added ActionInitialization class         210        - Added ActionInitialization class
254        - Modified RunAction to handle master a    211        - Modified RunAction to handle master and daughter threads
255                                                   212 
256 09.10.2013 - Ivana Hrivnacova (DICOM-V09-06-03    213 09.10.2013 - Ivana Hrivnacova (DICOM-V09-06-03)
257            Fixed file description (DicomPhanto    214            Fixed file description (DicomPhantomZSliceMerged.hh)
258                                                   215 
259 28.08.2013 - Gabriele Cosmo (DICOM-V09-06-02)     216 28.08.2013 - Gabriele Cosmo (DICOM-V09-06-02)
260            Added G4Ellipsoid to solids enabled    217            Added G4Ellipsoid to solids enabled for parameterisation in
261            DicomNestedPhantomParameterisation.    218            DicomNestedPhantomParameterisation.
262                                                   219 
263 29.07.2013 - Peter Gumplinger (DICOM-V09-06-01    220 29.07.2013 - Peter Gumplinger (DICOM-V09-06-01)
264            Fixed MAC/clang32 compilation warni    221            Fixed MAC/clang32 compilation warnings in DicomRunAction and
265            DiconIntersectVolume classes           222            DiconIntersectVolume classes
266                                                   223 
267 18.07.2013 - Jonathan Madsen                      224 18.07.2013 - Jonathan Madsen
268            Missing documentation update from 1    225            Missing documentation update from 18.12.2012:
269              Improvements and bug-fixes ->        226              Improvements and bug-fixes ->
270              DicomHandler had some bugs when u    227              DicomHandler had some bugs when using DCM files
271                other than examples provided       228                other than examples provided
272              Added DicomPhantomZSliceMerged cl    229              Added DicomPhantomZSliceMerged class to handle
273                inconsistencies in DCM file met    230                inconsistencies in DCM file meta-data
274              DicomPhantomZSliceHeader class is    231              DicomPhantomZSliceHeader class is extended to hold density
275                and material ID data and the pr    232                and material ID data and the printing of data
276                to files instead of DicomHandle    233                to files instead of DicomHandler
277            Removed additions on 16.07.2013 pen    234            Removed additions on 16.07.2013 pending further discussion
278            Reverted DICOM example to 18.12.201    235            Reverted DICOM example to 18.12.2012 update with some very
279              minor tweaks                         236              minor tweaks
280            Kept share folder with additional a    237            Kept share folder with additional anonymous DCM files
281              and additional data files (SixSli    238              and additional data files (SixSlice.dat, AltData.dat). Rename
282              these files with Data.dat to use     239              these files with Data.dat to use
283            Kept CMakeLists.txt to copy over ex    240            Kept CMakeLists.txt to copy over extra data file and anonymous
284              DCM files                            241              DCM files
285                                                   242 
286 16.07.2013 - Jonathan Madsen                      243 16.07.2013 - Jonathan Madsen
287            Many modifications to the DICOM exa    244            Many modifications to the DICOM example.
288            Added more anonymous DICOM files.      245            Added more anonymous DICOM files.
289            Added more script configurations.      246            Added more script configurations.
290            Added DicomCommandLineOptions, Dico    247            Added DicomCommandLineOptions, DicomHelpers, DicomTypeConversion,
291              DicomOption as part of a command     248              DicomOption as part of a command line processing package.
292            Modified CMakeLists.txt to configur    249            Modified CMakeLists.txt to configure extra files.
293            Added capability to use different d    250            Added capability to use different data files for DICOM set,
294              CT2Density file, ColourMap file.     251              CT2Density file, ColourMap file.
295            Added Statistical Analysis and Stat    252            Added Statistical Analysis and Statistical Manager classes
296            Miscellaneous improvements.            253            Miscellaneous improvements.
297            DICOM.cc now has a large list of ru    254            DICOM.cc now has a large list of runtime configuration options
298              via command line.                    255              via command line.
299            Options set at command line are set    256            Options set at command line are set to override environment
300              variables.                           257              variables.
301                                                   258 
302 15.02.2013 - Ivana Hrivnacova (DICOM-V09-06-00    259 15.02.2013 - Ivana Hrivnacova (DICOM-V09-06-00)
303            Applied coding guidelines (virtual     260            Applied coding guidelines (virtual keyword, data members
304            names and initialization)              261            names and initialization)
305                                                   262 
306 07.11.2012 - Gabriele Cosmo (DICOM-V09-05-10)     263 07.11.2012 - Gabriele Cosmo (DICOM-V09-05-10)
307            Fixed compilation warnings for shad    264            Fixed compilation warnings for shadowing of variables and unused
308            return flag from system calls.         265            return flag from system calls.
309                                                   266 
310 18.10.2012 - Ivana Hrivnacova (DICOM-V09-05-09    267 18.10.2012 - Ivana Hrivnacova (DICOM-V09-05-09)
311      Updated CMakeLists.txt: added copying dat    268      Updated CMakeLists.txt: added copying data files to the build
312            area as they are needed to run the     269            area as they are needed to run the tests.
313                                                   270 
314 13.10.2012 - Andrea Dotti (DICOM-V09-05-08)       271 13.10.2012 - Andrea Dotti (DICOM-V09-05-08)
315      Removing previous tag modification (not n    272      Removing previous tag modification (not needed)
316                                                   273 
317 13.10.2012 - Andrea Dotti (DICOM-V09-05-07)       274 13.10.2012 - Andrea Dotti (DICOM-V09-05-07)
318        Adding explicit use of system of units     275        Adding explicit use of system of units
319                                                   276 
320 05.09.2012 - Ivana Hrivnacova (DICOM-V09-05-06    277 05.09.2012 - Ivana Hrivnacova (DICOM-V09-05-06)
321              Fixed compiler warning               278              Fixed compiler warning
322                                                   279 
323 04.09.2012 - Pedro Arce    (DICOM-V09-05-05)      280 04.09.2012 - Pedro Arce    (DICOM-V09-05-05)
324              Remove old renamed files             281              Remove old renamed files
325              Updated CMakeLists.txt (By I.Hriv    282              Updated CMakeLists.txt (By I.Hrivnacova)
326              Adding visualization, copying mac    283              Adding visualization, copying macros, install target and
327              comment lines                        284              comment lines
328                                                   285 
329 17.07.2012 - Ivana Hrivnacova (DICOM-V09-05-04    286 17.07.2012 - Ivana Hrivnacova (DICOM-V09-05-04)
330              Improved README files                287              Improved README files
331                                                   288 
332 06.07.2012 - Pedro Arce    (DICOM-V09-05-03)      289 06.07.2012 - Pedro Arce    (DICOM-V09-05-03)
333              Reviewed examples according to co    290              Reviewed examples according to coding guidelines
334                                                   291 
335 13.06.2012 - Gabriele Cosmo   (DICOM-V09-05-02    292 13.06.2012 - Gabriele Cosmo   (DICOM-V09-05-02)
336              Assign return value for fread() a    293              Assign return value for fread() and fscanf() calls in
337              DicomHandler. Fixes compilation w    294              DicomHandler. Fixes compilation warnings on Ubuntu.
338                                                   295 
339 28.03.2012 - Pedro Arce   (DICOM-V09-05-01)       296 28.03.2012 - Pedro Arce   (DICOM-V09-05-01)
340              Corrections in materials Z/A. Add    297              Corrections in materials Z/A. Addressing problem report #1287.
341                                                   298 
342 13.11.2011 - Pedro Arce   (DICOM-V09-04-03)       299 13.11.2011 - Pedro Arce   (DICOM-V09-04-03)
343              Migration to new G4Exception sche    300              Migration to new G4Exception scheme.
344                                                   301 
345 03.10.2011 - G.Folger   (DICOM-V09-04-02)         302 03.10.2011 - G.Folger   (DICOM-V09-04-02)
346              Fix gcc46 compilation warning in     303              Fix gcc46 compilation warning in DicomHandler.cc
347              and DicomPhantomParameterisationC    304              and DicomPhantomParameterisationColour.cc
348                                                   305 
349 05.06.2011 - Pedro Arce (DICOM-V09-04-01)         306 05.06.2011 - Pedro Arce (DICOM-V09-04-01)
350              Corrected name for sensitive dete    307              Corrected name for sensitive detector to be consistently
351              named as "phantomSD" in DicomRunA    308              named as "phantomSD" in DicomRunAction. Addressing problem
352              report #1210.                        309              report #1210.
353              Corrected axis slicing hint in ne    310              Corrected axis slicing hint in nested-parameterisation.
354                                                   311 
355 23.12.2010 - Stephane Chauvie                     312 23.12.2010 - Stephane Chauvie
356              Corrected 2 bugs in DicomHandler     313              Corrected 2 bugs in DicomHandler
357                                                   314 
358 30.11.2010 - John Allison                         315 30.11.2010 - John Allison
359              dicom.cc: Removed redundant heade    316              dicom.cc: Removed redundant headers:
360              "G4UIterminal.hh" and "G4UItcsh.h    317              "G4UIterminal.hh" and "G4UItcsh.hh".
361                                                   318 
362 30.11.2010 - Ivana Hrivnacova (DICOM-V09-03-09    319 30.11.2010 - Ivana Hrivnacova (DICOM-V09-03-09)
363              Moved inclusion of vis headers as    320              Moved inclusion of vis headers as last in main().
364                                                   321 
365 26.11.2010 - Pedro Arce (DICOM-V09-03-08)         322 26.11.2010 - Pedro Arce (DICOM-V09-03-08)
366        Correction of warnings                     323        Correction of warnings
367                                                   324 
368 24.11.2010 - Pedro Arce (DICOM-V09-03-07)         325 24.11.2010 - Pedro Arce (DICOM-V09-03-07)
369        Introduced partial phantom example         326        Introduced partial phantom example
370        Delete G4PSDoseDeposit_RegNav and use G    327        Delete G4PSDoseDeposit_RegNav and use G4ScoreSplittingProcess instead
371                                                   328 
372 11.11.2010 - Gabriele Cosmo (DICOM-V09-03-06)     329 11.11.2010 - Gabriele Cosmo (DICOM-V09-03-06)
373              Corrected vis.mac macro and set O    330              Corrected vis.mac macro and set OGL as default viewer.
374              Corrected some printouts in code.    331              Corrected some printouts in code...
375                                                   332 
376 09.11.2010 - Gabriele Cosmo (DICOM-V09-03-05)     333 09.11.2010 - Gabriele Cosmo (DICOM-V09-03-05)
377              Fixed compilation warning on virt    334              Fixed compilation warning on virtual methods hiding
378              Fixed compilation warnings in Dic    335              Fixed compilation warnings in DicomPhantomParameterisationColour
379              and DicomHandler.                    336              and DicomHandler.
380                                                   337 
381 02.11.2010 - John Allison (DICOM-V09-03-04)       338 02.11.2010 - John Allison (DICOM-V09-03-04)
382              Introduced G4UIExecutive.            339              Introduced G4UIExecutive.
383                                                   340 
384 06.06.2010 - Joseph Perl (DICOM-V09-03-03)        341 06.06.2010 - Joseph Perl (DICOM-V09-03-03)
385        Remove unused variable in EventAction      342        Remove unused variable in EventAction
386                                                   343 
387 03.06.2010 - Joseph Perl (DICOM-V09-03-02)        344 03.06.2010 - Joseph Perl (DICOM-V09-03-02)
388        Updated vis usage                          345        Updated vis usage
389                                                   346 
390 19.11.2009 - StÈphane Chauvie (DICOM-V09-03-0    347 19.11.2009 - StÈphane Chauvie (DICOM-V09-03-00)
391 01.06.2010 - Stephane Chauvie - Andrea Armando    348 01.06.2010 - Stephane Chauvie - Andrea Armando
392        Added function to read nested items (de    349        Added function to read nested items (defined and undefined)
393        Removed dependencies on CONQUEST           350        Removed dependencies on CONQUEST
394        DICOM handler could now read whichever     351        DICOM handler could now read whichever DICOM file
395              (PT,CT,DR,CR,US,MR... )              352              (PT,CT,DR,CR,US,MR... )
396                                                   353 
397 19.11.2009 - Stephanee Chauvie (DICOM-V09-02-0    354 19.11.2009 - Stephanee Chauvie (DICOM-V09-02-03)
398        Changed DICOM Handler to read CT files     355        Changed DICOM Handler to read CT files coming from CONQUEST
399              DICOM server                         356              DICOM server
400                                                   357 
401 05.02.2009 - Pedro Arce (DICOM-V09-02-01)         358 05.02.2009 - Pedro Arce (DICOM-V09-02-01)
402              Added report on dose per voxel.      359              Added report on dose per voxel.
403              Added warning for erroneous inclu    360              Added warning for erroneous inclusion of development code in
404              release 9.2 (to be removed when f    361              release 9.2 (to be removed when fix will be included in patch).
405                                                   362 
406 27.01.2009 - Gabriele Cosmo (DICOM-V09-02-00)     363 27.01.2009 - Gabriele Cosmo (DICOM-V09-02-00)
407              Use new class G4RegularNavigation    364              Use new class G4RegularNavigationHistory for counting of step
408              lengths in voxels of the regular     365              lengths in voxels of the regular structure.
409                                                   366 
410 27.11.2008 - Pedro Arce (DICOM-V09-01-02)         367 27.11.2008 - Pedro Arce (DICOM-V09-01-02)
411              Included G4PSDoseDeposit_RegNav t    368              Included G4PSDoseDeposit_RegNav to distribute dose along voxels,
412        including msc and energy loss correctio    369        including msc and energy loss corrections, for the case of
413        skipping voxel with equal materials whe    370        skipping voxel with equal materials when using regular
414        navigation                                 371        navigation
415                                                   372 
416 21.07.2008 - Pedro Arce (DICOM-V09-01-01)         373 21.07.2008 - Pedro Arce (DICOM-V09-01-01)
417              Bug fix in DicomNestedPhantomPara    374              Bug fix in DicomNestedPhantomParameterisation in calculating the
418              'copyNo', so that material assign    375              'copyNo', so that material assignment was wrong
419              Set default cut to 1 mm (with pre    376              Set default cut to 1 mm (with previous 1.E-3 mm too much time is
420              spent on physics and no improveme    377              spent on physics and no improvement is seen with different
421              navigation options).                 378              navigation options).
422              Corrected direction and position     379              Corrected direction and position of primary particles so that
423              they traverse the DICOM voxels.      380              they traverse the DICOM voxels.
424                                                   381 
425 22.01.2008 - Pedro Arce (DICOM-V09-01-00)         382 22.01.2008 - Pedro Arce (DICOM-V09-01-00)
426              Do not use 'rindex' in DicomHandl    383              Do not use 'rindex' in DicomHandler class to avoid problems
427              on Windows.                          384              on Windows.
428                                                   385 
429 06.12.2007 - Pedro Arce                           386 06.12.2007 - Pedro Arce
430              Added voxel colouring by material    387              Added voxel colouring by material. Added possibility to use nested parameterisation
431                                                   388 
432 05.12.2007 - Pedro Arce                           389 05.12.2007 - Pedro Arce
433              Deep review on the input files an    390              Deep review on the input files and the way how the geometry is built.
434              Use of G4PhantomParameterisation     391              Use of G4PhantomParameterisation and G4RegularNavigation.
435                                                   392 
436 06.12.2005 - Gabriele Cosmo                       393 06.12.2005 - Gabriele Cosmo
437              Trivial changes for support of CL    394              Trivial changes for support of CLHEP-2.0.X series.
438                                                   395 
439 29.11.2005 - Susanna Guatelli (DICOM-V07-01-00    396 29.11.2005 - Susanna Guatelli (DICOM-V07-01-00)
440              Documentation update                 397              Documentation update
441                                                   398 
442 12.06.2005 - Stephane Chauvie (DICOM-V07-00-01    399 12.06.2005 - Stephane Chauvie (DICOM-V07-00-01)
443              Added improvement by Akinori Kimu    400              Added improvement by Akinori Kimura.
444                                                   401 
445 03.05.2005 - John Allison                         402 03.05.2005 - John Allison
446              Replaced vis manager with G4VisEx    403              Replaced vis manager with G4VisExecutive.
447                                                   404 
448 10.12.2004 - Maria Grazia Pia (DICOM-V06-02-02    405 10.12.2004 - Maria Grazia Pia (DICOM-V06-02-02)
449              Update README to announce further    406              Update README to announce further improvements and fixes
450              by Akinori Kimura.                   407              by Akinori Kimura.
451                                                   408 
452 3.12.2004 - Gabriele Cosmo (DICOM-V06-02-01)      409 3.12.2004 - Gabriele Cosmo (DICOM-V06-02-01)
453             Implemented migration to <cmath>.     410             Implemented migration to <cmath>.
454                                                   411 
455 13.5.2004 - Susanna Guatelli                      412 13.5.2004 - Susanna Guatelli
456             updated compiler: gcc3.2.3            413             updated compiler: gcc3.2.3
457                                                   414 
458 11.3.2003 - Susanna Guatelli                      415 11.3.2003 - Susanna Guatelli
459             README changed                        416             README changed
460                                                   417 
461 6.2003 - Susanna Guatelli                         418 6.2003 - Susanna Guatelli
462          First public release of the example      419          First public release of the example