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Geant4/examples/extended/medical/DICOM/History

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Diff markup

Differences between /examples/extended/medical/DICOM/History (Version 11.3.0) and /examples/extended/medical/DICOM/History (Version 10.7.p1)


  1 # Example DICOM History                        <<   1 -------------------------------------------------------------------
  2                                                     2 
  3 See `CONTRIBUTING.rst` for details of **requir <<   3      =========================================================
  4 which **must** added in reverse chronological  <<   4           Geant4 - DICOM example
  5 It must **not** be used as a substitute for wr <<   5      =========================================================
  6                                                << 
  7 ---------------------------------------------- << 
  8                                                << 
  9 ## 2024-06-05 L. T. Anh (DICOM-V11-02-00)      << 
 10 - Correct symbols for Chlorine and Potassium e << 
 11   InitialisationOfMaterials().                 << 
 12                                                << 
 13 ## 2023-12-03 A. Howard (DICOM-V11-01-02)      << 
 14 - Modified DicomDetectorConstruction: added co << 
 15   of G4PSDoseDeposit3D for nested parameterisa << 
 16   according to the fixed formula within G4PSDo << 
 17   variable to switch to standard G4PSDoseDepos << 
 18   navigation (default).                        << 
 19 - Updated README and .README to be more correc << 
 20   G4PSDoseDeposit3D and its usage for nested p << 
 21                                                << 
 22 ## 2023-11-25 C. Mancini (DICOM-V11-01-01)     << 
 23 - Modified DicomNestedPhantomParameterisation: << 
 24   from the  "G4Material* mate" instantiation.  << 
 25                                                << 
 26 ## 2023-09-02 Gabriele Cosmo (DICOM-V11-01-00) << 
 27 - Removed forward declaration for G4VTouchable << 
 28                                                << 
 29 ## 2022-10-04 John Allison (DICOM-V11-00-04)   << 
 30 - Introduce special mesh rendering of DICOM im << 
 31                                                << 
 32 ## 2022-10-24 I. Hrivnacova  (DICOM-V11-00-03) << 
 33 - Coding guidelines: start data member with 'f << 
 34   (skipped dicomReader classes).               << 
 35                                                << 
 36 ## 2022-10-04 Ben Morgan (DICOM-V11-00-02)     << 
 37 - Replace sprintf with direct G4String use to  << 
 38   macOS-13.                                    << 
 39                                                << 
 40 ## 2022-10-04 Gabriele Cosmo (DICOM-V11-00-01) << 
 41 - Fixed compilation warning on Intel-icx compi << 
 42   in DicomHandler::ReadData().                 << 
 43                                                << 
 44 ## 2021-12-10 Ben Morgan (DICOM-V11-00-00)     << 
 45 - Change to new Markdown History format.       << 
 46                                                << 
 47 ---                                            << 
 48                                                << 
 49 # History entries prior to 11.0                << 
 50                                                << 
 51 27.09.2021  Pedro Arce (DICOM-V10-07-01)       << 
 52 - Use updated interface from geomnav to use G4 << 
 53                                                << 
 54 31.12.2020 - John Allison (DICOM-V10-07-00)    << 
 55              vis.mac: "Change /vis/ogl/set/eve << 
 56              "/vis/ogl/flushAt NthPrimitive".  << 
 57                                                     6 
                                                   >>   7                       Category History file
 58 10.11.2020 - Ben Morgan (DICOM-V10-06-01)           8 10.11.2020 - Ben Morgan (DICOM-V10-06-01)
 59              Migration to G4RunManagerFactory.      9              Migration to G4RunManagerFactory.
 60                                                    10 
 61 21.10.2020 - Ben Morgan (DICOM-V10-06-00)          11 21.10.2020 - Ben Morgan (DICOM-V10-06-00)
 62              Distinguish output names of archi     12              Distinguish output names of archive lib from DLL and application to
 63              fix Windows LNK1149 errors for st     13              fix Windows LNK1149 errors for static libs.
 64              Modernize cmake version detection     14              Modernize cmake version detection and policy setting to follow main
 65              Geant4 usage.                         15              Geant4 usage.
 66                                                    16 
 67 19.11.2019 - Gabriele Cosmo (DICOM-V10-05-03)      17 19.11.2019 - Gabriele Cosmo (DICOM-V10-05-03)
 68              Fixed more cases of implicit type     18              Fixed more cases of implicit type conversions.
 69              Some minor code cleanup.              19              Some minor code cleanup.
 70                                                    20 
 71 15.11.2019 - Gabriele Cosmo (DICOM-V10-05-02)      21 15.11.2019 - Gabriele Cosmo (DICOM-V10-05-02)
 72              Fixed cases of implicit type conv     22              Fixed cases of implicit type conversions from size_t to G4int.
 73                                                    23 
 74 12.11.2019 - Gunter Folger (DICOM-V10-05-01)       24 12.11.2019 - Gunter Folger (DICOM-V10-05-01)
 75              Correct DicomHandler singleton fo     25              Correct DicomHandler singleton for use on Windows.
 76        DICOM2 was crashing                         26        DICOM2 was crashing
 77                                                    27 
 78 08.06.2019 - Gabriele Cosmo (DICOM-V10-05-00)      28 08.06.2019 - Gabriele Cosmo (DICOM-V10-05-00)
 79              Defaulted copy-ctr in DicomPhanto     29              Defaulted copy-ctr in DicomPhantomZSliceHeader, to fix deprecation
 80              compilation warnings on gcc-9.1.      30              compilation warnings on gcc-9.1.
 81                                                    31 
 82 13.11.2018 - Jonathan Madsen (DICOM-V10-04-11)     32 13.11.2018 - Jonathan Madsen (DICOM-V10-04-11)
 83              Bugfix (2102) to DicomHandler rea     33              Bugfix (2102) to DicomHandler reading fPixelSpacingY
 84                                                    34 
 85 13.11.2018 - Jonathan Madsen (DICOM-V10-04-10)     35 13.11.2018 - Jonathan Madsen (DICOM-V10-04-10)
 86              Bugfix (2101) to DicomHandler ski     36              Bugfix (2101) to DicomHandler skipping 2 bytes in implicit VR
 87                                                    37 
 88 12.11.2018 - Jonathan Madsen (DICOM-V10-04-09)     38 12.11.2018 - Jonathan Madsen (DICOM-V10-04-09)
 89              Updated DICOMUtilities.cmake to h     39              Updated DICOMUtilities.cmake to handle Windows builds
 90              Using modern CMake DICOM::target      40              Using modern CMake DICOM::target library alias
 91                                                    41 
 92 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-08)      42 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-08)
 93              DicomDetectorConstruction: remove     43              DicomDetectorConstruction: removed useless static Instance()
 94              method.                               44              method.
 95                                                    45 
 96 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-07)      46 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-07)
 97              DicomPartialDetectorConstruction:     47              DicomPartialDetectorConstruction: fixed shadowing of base class
 98              data for 'fMateIDs'. Fixed type c     48              data for 'fMateIDs'. Fixed type conversion unsigned_int -> int.
 99                                                    49 
100 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-06)      50 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-06)
101              DicomNestedPhantomParameterisatio     51              DicomNestedPhantomParameterisation: removed useless statement
102              causing compilation error on Linu     52              causing compilation error on Linux.
103                                                    53 
104 10.11.2018 - Jonathan Madsen (DICOM-V10-04-05)     54 10.11.2018 - Jonathan Madsen (DICOM-V10-04-05)
105              DICOMConfig.cmake.in handles DICO     55              DICOMConfig.cmake.in handles DICOM_USE_HEAD being set
106              DownloadDICOMData.cmake does inst     56              DownloadDICOMData.cmake does installation
107              CMakeLists.txt creates build-tree     57              CMakeLists.txt creates build-tree export
108              DicomDetectorConstruction is glob     58              DicomDetectorConstruction is globally accessible
109              DicomHandler implements GetDicomD     59              DicomHandler implements GetDicomData{Path,File}
110                which provides a fallback path      60                which provides a fallback path to data libraries
111                directory for DICOM2 and handle     61                directory for DICOM2 and handles DICOM_USE_HEAD situation
112              Phantom parameterization classes      62              Phantom parameterization classes take an argument
113                specifying color file               63                specifying color file
114              fDcmrun is protected instead of p     64              fDcmrun is protected instead of private (for DICOM2)
115              DicomEventAction doesn't print ev     65              DicomEventAction doesn't print every event
116              Removed DicomRun::RecordEvent inc     66              Removed DicomRun::RecordEvent incrementing numberOfEvent
117                (done by G4Run::RecordEvent)        67                (done by G4Run::RecordEvent)
118              Cleaned up output (when provided      68              Cleaned up output (when provided along with DICOM2 output
119                it was too excessive) now just      69                it was too excessive) now just a summary is provided
120                and per-voxel is output to file     70                and per-voxel is output to file only
121              Moved Data.dat to Data.dat.old an     71              Moved Data.dat to Data.dat.old and CMake copies correct
122                Data.dat.{old,new} to Data.dat      72                Data.dat.{old,new} to Data.dat in binary directory based
123                on DICOM_USE_DCMTK setting          73                on DICOM_USE_DCMTK setting
124              Updated README                        74              Updated README
125                                                    75 
126 09.11.2018 - Gabriele Cosmo (DICOM-V10-04-04)      76 09.11.2018 - Gabriele Cosmo (DICOM-V10-04-04)
127              Use canonical definition for DICO     77              Use canonical definition for DICOMRunAction; removed wrong
128              singleton specification (in any c     78              singleton specification (in any case not necessary).
129                                                    79 
130 22.06.2018 - Jonathan Madsen (DICOM-V10-04-03)     80 22.06.2018 - Jonathan Madsen (DICOM-V10-04-03)
131              Added dicomReader/cmake/DICOMUtil     81              Added dicomReader/cmake/DICOMUtilities.cmake that defines
132              a DICOM_BUILD_LIBRARY macro which     82              a DICOM_BUILD_LIBRARY macro which handles how to build
133              DICOM-library (and dicomReader li     83              DICOM-library (and dicomReader library if USE_DICOM_DCMTK=ON)
134              based on the Geant4 installation      84              based on the Geant4 installation (e.g. build shared, static, or
135              both) + updates to DICOMConfig.cm     85              both) + updates to DICOMConfig.cmake.in and
136              dicomReaderConfig.cmake.in to han     86              dicomReaderConfig.cmake.in to handle which library type to
137              use link to                           87              use link to
138                                                    88 
139 20.05.2018 - John Allison (DICOM-V10-04-02)        89 20.05.2018 - John Allison (DICOM-V10-04-02)
140              Remove G4UI_USE and G4VIS_USE.        90              Remove G4UI_USE and G4VIS_USE.
141              Move instantiation of G4UIExecuti     91              Move instantiation of G4UIExecutive to start of main.
142                                                    92 
143 09.05.2018 - Ben Morgan (DICOM-V10-04-01)          93 09.05.2018 - Ben Morgan (DICOM-V10-04-01)
144              Include G4Types before use of G4M     94              Include G4Types before use of G4MULTITHREADED. For forward
145              compatibility with move to #defin     95              compatibility with move to #defines over -D for G4 preprocessor
146              symbols.                              96              symbols.
147                                                    97 
148 20.03.2018 - Jonathan Madsen (DICOM-V10-04-00)     98 20.03.2018 - Jonathan Madsen (DICOM-V10-04-00)
149              Enabled CMake package configurati     99              Enabled CMake package configuration
150              Added DICOM_USE_DCMTK and DICOM_U    100              Added DICOM_USE_DCMTK and DICOM_USE_HEAD CMake
151               options back-compat with environ    101               options back-compat with environment variables
152              Updated README and .README.txt       102              Updated README and .README.txt
153                                                   103 
154 11.11.2017 - Marc Verderi (DICOM-V10-03-12)       104 11.11.2017 - Marc Verderi (DICOM-V10-03-12)
155              Retag as DICOM-V10-03-11 too quic    105              Retag as DICOM-V10-03-11 too quickly rejected
156                                                   106 
157 09.11.2017 - Ivana Hrivnacova (DICOM-V10-03-11    107 09.11.2017 - Ivana Hrivnacova (DICOM-V10-03-11)
158              Updated DICOM data version to 1.1    108              Updated DICOM data version to 1.1
159                                                   109 
160 09.11.2017 - S. Guatelli (DICOM-V10-03-10)        110 09.11.2017 - S. Guatelli (DICOM-V10-03-10)
161              Updated README and .README.txt       111              Updated README and .README.txt
162                                                   112 
163 09.11.2017 - S. Guatelli (DICOM-V10-03-09)        113 09.11.2017 - S. Guatelli (DICOM-V10-03-09)
164              .g4dmc created in the user direct    114              .g4dmc created in the user directory and not in the DICOM library,
165              together with the .g4dcmb files.     115              together with the .g4dcmb files.
166                                                   116 
167 09.11.2017 - S. Guatelli (DICOM-V10-03-08)        117 09.11.2017 - S. Guatelli (DICOM-V10-03-08)
168              DICOM_PATH changed                   118              DICOM_PATH changed
169              no writing .g4dcmb in the library    119              no writing .g4dcmb in the library DICOM
170                                                   120 
171 08.11.2017 - Ivana Hrivnacova (DICOM-V10-03-07    121 08.11.2017 - Ivana Hrivnacova (DICOM-V10-03-07)
172              Added downloading DICOM data in C    122              Added downloading DICOM data in CMake build
173              (used only with DICOM_USE_HEAD op    123              (used only with DICOM_USE_HEAD option)
174                                                   124 
175 07.11.2017 - S. Guatelli (DICOM-V10-03-06).       125 07.11.2017 - S. Guatelli (DICOM-V10-03-06).
176              Warning deleted, updated README a    126              Warning deleted, updated README and .README.txt
177                                                   127 
178 01.11.2017 - S. Guatelli (DICOM-V10-03-05).       128 01.11.2017 - S. Guatelli (DICOM-V10-03-05).
179              DICOM_HEAD library can be used as    129              DICOM_HEAD library can be used as input to the DICOM
180              DICOM_v1 does not need to be copi    130              DICOM_v1 does not need to be copied in the directory where the simulation is executed
181                                                   131 
182 01.11.2017 - S. Guatelli (DICOM-V10-03-04). DI    132 01.11.2017 - S. Guatelli (DICOM-V10-03-04). DICOM_HEAD library can be used as input to the DICOM
183                                                   133 
184 28.09.2017 - S. Guatelli (DICOM-V10-03-03). DI    134 28.09.2017 - S. Guatelli (DICOM-V10-03-03). DICOM_HEAD Directory deleted
185                                                   135 
186 16.09.2017 - S. Guatelli (DICOM-V10-03-02)        136 16.09.2017 - S. Guatelli (DICOM-V10-03-02)
187            - New DICOM Digital Head included b    137            - New DICOM Digital Head included by S. Guatelli
188            - Updated README, .README.txt          138            - Updated README, .README.txt
189                                                   139 
190 19.11.2016 - Andrea Dotti     (DICOM-V10-02-04    140 19.11.2016 - Andrea Dotti     (DICOM-V10-02-04)
191            - explicit set of SD to manager        141            - explicit set of SD to manager
192                                                   142 
193 11.11.2016 - Ivana Hrivnacova (DICOM-V10-02-03    143 11.11.2016 - Ivana Hrivnacova (DICOM-V10-02-03)
194            - Removed extra compiler flags in G    144            - Removed extra compiler flags in GNUmakefile, CMakeLists.txt
195              (not needed)                         145              (not needed)
196            - Renamed G4_USE_DCMTK in DICOM_USE    146            - Renamed G4_USE_DCMTK in DICOM_USE_DCMTK
197            - Updated README, .README.txt          147            - Updated README, .README.txt
198                                                   148 
199 11.11.2016 - Pedro Arce (DICOM-V10-02-02)         149 11.11.2016 - Pedro Arce (DICOM-V10-02-02)
200            - Complying with Geant4 guidelines     150            - Complying with Geant4 guidelines in data variables
201                                                   151 
202 04.11.2016 - Pedro Arce (DICOM-V10-02-01)         152 04.11.2016 - Pedro Arce (DICOM-V10-02-01)
203            - New DICOM reader based on DCMTK      153            - New DICOM reader based on DCMTK
204                                                   154 
205 20.07.2016 - Ivana Hrivnacova (DICOM-V10-02-00    155 20.07.2016 - Ivana Hrivnacova (DICOM-V10-02-00)
206            - Fixed coding guidelines              156            - Fixed coding guidelines
207              (redundant empty lines, class dat    157              (redundant empty lines, class data member names)
208                                                   158 
209 17.09.2015 - Pedro Arce (DICOM-V10-01-01)         159 17.09.2015 - Pedro Arce (DICOM-V10-01-01)
210            - Fixed coding guidelines (long lin    160            - Fixed coding guidelines (long lines)
211                                                   161 
212 21.10.2014 - Pedro Arce (DICOM-V10-00-04)         162 21.10.2014 - Pedro Arce (DICOM-V10-00-04)
213            - Fixed coding guidelines (long lin    163            - Fixed coding guidelines (long lines)
214                                                   164 
215 16.10.2014 - Ivana Hrivnacova (DICOM-V10-00-03    165 16.10.2014 - Ivana Hrivnacova (DICOM-V10-00-03)
216            - Fixed coding guidelines (long lin    166            - Fixed coding guidelines (long lines) in
217              DicomPartialDetectorConstruction.    167              DicomPartialDetectorConstruction.hh, DicomPhantomZSliceHeader.hh
218                                                   168 
219 29.07.2014 - Pedro Arce (DICOM-V10-00-02)         169 29.07.2014 - Pedro Arce (DICOM-V10-00-02)
220            - Remove DicomPhysicsList              170            - Remove DicomPhysicsList
221                                                   171 
222 25.07.2014 - Pedro Arce (DICOM-V10-00-01)         172 25.07.2014 - Pedro Arce (DICOM-V10-00-01)
223            - Using G4GenericPhysicsList           173            - Using G4GenericPhysicsList
224          - no std::cout                           174          - no std::cout
225      - no exit()                                  175      - no exit()
226                                                   176 
227 03.12.2013 - Gabriele Cosmo (DICOM-V10-00-00)     177 03.12.2013 - Gabriele Cosmo (DICOM-V10-00-00)
228            - Attempt to fix Valgrind run-time     178            - Attempt to fix Valgrind run-time error from printout in
229              DicomHandler::CheckFileFormat().     179              DicomHandler::CheckFileFormat().
230                                                   180 
231 03.12.2013 - Ivana Hrivnacova (DICOM-V09-06-09    181 03.12.2013 - Ivana Hrivnacova (DICOM-V09-06-09)
232            - Updated README and .README to mat    182            - Updated README and .README to match (Pedro Arce)
233                                                   183 
234 18.11.2014 - Ivana Hrivnacova (DICOM-V09-06-08    184 18.11.2014 - Ivana Hrivnacova (DICOM-V09-06-08)
235            - Fixed DicomPhantomZSliceMerged.hh    185            - Fixed DicomPhantomZSliceMerged.hh file description
236              (for Doxygen)                        186              (for Doxygen)
237                                                   187 
238 13.11.2014 - Jonathan Mdsen (DICOM-V09-06-07)     188 13.11.2014 - Jonathan Mdsen (DICOM-V09-06-07)
239            - Updated README and .README           189            - Updated README and .README
240            - Fixed some comments                  190            - Fixed some comments
241                                                   191 
242 04.11.2013 - Dennis Wright  (DICOM-V09-06-06)     192 04.11.2013 - Dennis Wright  (DICOM-V09-06-06)
243            - replaced LEP model for alphas by     193            - replaced LEP model for alphas by extending Binary cascade to
244              zero energy                          194              zero energy
245            - updated sample output files to re    195            - updated sample output files to reflect this
246                                                   196 
247 23.10.2013 - Gabriele Cosmo (DICOM-V09-06-05)     197 23.10.2013 - Gabriele Cosmo (DICOM-V09-06-05)
248      - Fixed compilation warnings.                198      - Fixed compilation warnings.
249                                                   199 
250 15.10.2013 - Jonathan Madsen (DICOM-V09-06-04)    200 15.10.2013 - Jonathan Madsen (DICOM-V09-06-04)
251      - Modified DICOM to enable multithreading    201      - Modified DICOM to enable multithreading
252        - Adapted scorers                          202        - Adapted scorers
253        - Added ActionInitialization class         203        - Added ActionInitialization class
254        - Modified RunAction to handle master a    204        - Modified RunAction to handle master and daughter threads
255                                                   205 
256 09.10.2013 - Ivana Hrivnacova (DICOM-V09-06-03    206 09.10.2013 - Ivana Hrivnacova (DICOM-V09-06-03)
257            Fixed file description (DicomPhanto    207            Fixed file description (DicomPhantomZSliceMerged.hh)
258                                                   208 
259 28.08.2013 - Gabriele Cosmo (DICOM-V09-06-02)     209 28.08.2013 - Gabriele Cosmo (DICOM-V09-06-02)
260            Added G4Ellipsoid to solids enabled    210            Added G4Ellipsoid to solids enabled for parameterisation in
261            DicomNestedPhantomParameterisation.    211            DicomNestedPhantomParameterisation.
262                                                   212 
263 29.07.2013 - Peter Gumplinger (DICOM-V09-06-01    213 29.07.2013 - Peter Gumplinger (DICOM-V09-06-01)
264            Fixed MAC/clang32 compilation warni    214            Fixed MAC/clang32 compilation warnings in DicomRunAction and
265            DiconIntersectVolume classes           215            DiconIntersectVolume classes
266                                                   216 
267 18.07.2013 - Jonathan Madsen                      217 18.07.2013 - Jonathan Madsen
268            Missing documentation update from 1    218            Missing documentation update from 18.12.2012:
269              Improvements and bug-fixes ->        219              Improvements and bug-fixes ->
270              DicomHandler had some bugs when u    220              DicomHandler had some bugs when using DCM files
271                other than examples provided       221                other than examples provided
272              Added DicomPhantomZSliceMerged cl    222              Added DicomPhantomZSliceMerged class to handle
273                inconsistencies in DCM file met    223                inconsistencies in DCM file meta-data
274              DicomPhantomZSliceHeader class is    224              DicomPhantomZSliceHeader class is extended to hold density
275                and material ID data and the pr    225                and material ID data and the printing of data
276                to files instead of DicomHandle    226                to files instead of DicomHandler
277            Removed additions on 16.07.2013 pen    227            Removed additions on 16.07.2013 pending further discussion
278            Reverted DICOM example to 18.12.201    228            Reverted DICOM example to 18.12.2012 update with some very
279              minor tweaks                         229              minor tweaks
280            Kept share folder with additional a    230            Kept share folder with additional anonymous DCM files
281              and additional data files (SixSli    231              and additional data files (SixSlice.dat, AltData.dat). Rename
282              these files with Data.dat to use     232              these files with Data.dat to use
283            Kept CMakeLists.txt to copy over ex    233            Kept CMakeLists.txt to copy over extra data file and anonymous
284              DCM files                            234              DCM files
285                                                   235 
286 16.07.2013 - Jonathan Madsen                      236 16.07.2013 - Jonathan Madsen
287            Many modifications to the DICOM exa    237            Many modifications to the DICOM example.
288            Added more anonymous DICOM files.      238            Added more anonymous DICOM files.
289            Added more script configurations.      239            Added more script configurations.
290            Added DicomCommandLineOptions, Dico    240            Added DicomCommandLineOptions, DicomHelpers, DicomTypeConversion,
291              DicomOption as part of a command     241              DicomOption as part of a command line processing package.
292            Modified CMakeLists.txt to configur    242            Modified CMakeLists.txt to configure extra files.
293            Added capability to use different d    243            Added capability to use different data files for DICOM set,
294              CT2Density file, ColourMap file.     244              CT2Density file, ColourMap file.
295            Added Statistical Analysis and Stat    245            Added Statistical Analysis and Statistical Manager classes
296            Miscellaneous improvements.            246            Miscellaneous improvements.
297            DICOM.cc now has a large list of ru    247            DICOM.cc now has a large list of runtime configuration options
298              via command line.                    248              via command line.
299            Options set at command line are set    249            Options set at command line are set to override environment
300              variables.                           250              variables.
301                                                   251 
302 15.02.2013 - Ivana Hrivnacova (DICOM-V09-06-00    252 15.02.2013 - Ivana Hrivnacova (DICOM-V09-06-00)
303            Applied coding guidelines (virtual     253            Applied coding guidelines (virtual keyword, data members
304            names and initialization)              254            names and initialization)
305                                                   255 
306 07.11.2012 - Gabriele Cosmo (DICOM-V09-05-10)     256 07.11.2012 - Gabriele Cosmo (DICOM-V09-05-10)
307            Fixed compilation warnings for shad    257            Fixed compilation warnings for shadowing of variables and unused
308            return flag from system calls.         258            return flag from system calls.
309                                                   259 
310 18.10.2012 - Ivana Hrivnacova (DICOM-V09-05-09    260 18.10.2012 - Ivana Hrivnacova (DICOM-V09-05-09)
311      Updated CMakeLists.txt: added copying dat    261      Updated CMakeLists.txt: added copying data files to the build
312            area as they are needed to run the     262            area as they are needed to run the tests.
313                                                   263 
314 13.10.2012 - Andrea Dotti (DICOM-V09-05-08)       264 13.10.2012 - Andrea Dotti (DICOM-V09-05-08)
315      Removing previous tag modification (not n    265      Removing previous tag modification (not needed)
316                                                   266 
317 13.10.2012 - Andrea Dotti (DICOM-V09-05-07)       267 13.10.2012 - Andrea Dotti (DICOM-V09-05-07)
318        Adding explicit use of system of units     268        Adding explicit use of system of units
319                                                   269 
320 05.09.2012 - Ivana Hrivnacova (DICOM-V09-05-06    270 05.09.2012 - Ivana Hrivnacova (DICOM-V09-05-06)
321              Fixed compiler warning               271              Fixed compiler warning
322                                                   272 
323 04.09.2012 - Pedro Arce    (DICOM-V09-05-05)      273 04.09.2012 - Pedro Arce    (DICOM-V09-05-05)
324              Remove old renamed files             274              Remove old renamed files
325              Updated CMakeLists.txt (By I.Hriv    275              Updated CMakeLists.txt (By I.Hrivnacova)
326              Adding visualization, copying mac    276              Adding visualization, copying macros, install target and
327              comment lines                        277              comment lines
328                                                   278 
329 17.07.2012 - Ivana Hrivnacova (DICOM-V09-05-04    279 17.07.2012 - Ivana Hrivnacova (DICOM-V09-05-04)
330              Improved README files                280              Improved README files
331                                                   281 
332 06.07.2012 - Pedro Arce    (DICOM-V09-05-03)      282 06.07.2012 - Pedro Arce    (DICOM-V09-05-03)
333              Reviewed examples according to co    283              Reviewed examples according to coding guidelines
334                                                   284 
335 13.06.2012 - Gabriele Cosmo   (DICOM-V09-05-02    285 13.06.2012 - Gabriele Cosmo   (DICOM-V09-05-02)
336              Assign return value for fread() a    286              Assign return value for fread() and fscanf() calls in
337              DicomHandler. Fixes compilation w    287              DicomHandler. Fixes compilation warnings on Ubuntu.
338                                                   288 
339 28.03.2012 - Pedro Arce   (DICOM-V09-05-01)       289 28.03.2012 - Pedro Arce   (DICOM-V09-05-01)
340              Corrections in materials Z/A. Add    290              Corrections in materials Z/A. Addressing problem report #1287.
341                                                   291 
342 13.11.2011 - Pedro Arce   (DICOM-V09-04-03)       292 13.11.2011 - Pedro Arce   (DICOM-V09-04-03)
343              Migration to new G4Exception sche    293              Migration to new G4Exception scheme.
344                                                   294 
345 03.10.2011 - G.Folger   (DICOM-V09-04-02)         295 03.10.2011 - G.Folger   (DICOM-V09-04-02)
346              Fix gcc46 compilation warning in     296              Fix gcc46 compilation warning in DicomHandler.cc
347              and DicomPhantomParameterisationC    297              and DicomPhantomParameterisationColour.cc
348                                                   298 
349 05.06.2011 - Pedro Arce (DICOM-V09-04-01)         299 05.06.2011 - Pedro Arce (DICOM-V09-04-01)
350              Corrected name for sensitive dete    300              Corrected name for sensitive detector to be consistently
351              named as "phantomSD" in DicomRunA    301              named as "phantomSD" in DicomRunAction. Addressing problem
352              report #1210.                        302              report #1210.
353              Corrected axis slicing hint in ne    303              Corrected axis slicing hint in nested-parameterisation.
354                                                   304 
355 23.12.2010 - Stephane Chauvie                     305 23.12.2010 - Stephane Chauvie
356              Corrected 2 bugs in DicomHandler     306              Corrected 2 bugs in DicomHandler
357                                                   307 
358 30.11.2010 - John Allison                         308 30.11.2010 - John Allison
359              dicom.cc: Removed redundant heade    309              dicom.cc: Removed redundant headers:
360              "G4UIterminal.hh" and "G4UItcsh.h    310              "G4UIterminal.hh" and "G4UItcsh.hh".
361                                                   311 
362 30.11.2010 - Ivana Hrivnacova (DICOM-V09-03-09    312 30.11.2010 - Ivana Hrivnacova (DICOM-V09-03-09)
363              Moved inclusion of vis headers as    313              Moved inclusion of vis headers as last in main().
364                                                   314 
365 26.11.2010 - Pedro Arce (DICOM-V09-03-08)         315 26.11.2010 - Pedro Arce (DICOM-V09-03-08)
366        Correction of warnings                     316        Correction of warnings
367                                                   317 
368 24.11.2010 - Pedro Arce (DICOM-V09-03-07)         318 24.11.2010 - Pedro Arce (DICOM-V09-03-07)
369        Introduced partial phantom example         319        Introduced partial phantom example
370        Delete G4PSDoseDeposit_RegNav and use G    320        Delete G4PSDoseDeposit_RegNav and use G4ScoreSplittingProcess instead
371                                                   321 
372 11.11.2010 - Gabriele Cosmo (DICOM-V09-03-06)     322 11.11.2010 - Gabriele Cosmo (DICOM-V09-03-06)
373              Corrected vis.mac macro and set O    323              Corrected vis.mac macro and set OGL as default viewer.
374              Corrected some printouts in code.    324              Corrected some printouts in code...
375                                                   325 
376 09.11.2010 - Gabriele Cosmo (DICOM-V09-03-05)     326 09.11.2010 - Gabriele Cosmo (DICOM-V09-03-05)
377              Fixed compilation warning on virt    327              Fixed compilation warning on virtual methods hiding
378              Fixed compilation warnings in Dic    328              Fixed compilation warnings in DicomPhantomParameterisationColour
379              and DicomHandler.                    329              and DicomHandler.
380                                                   330 
381 02.11.2010 - John Allison (DICOM-V09-03-04)       331 02.11.2010 - John Allison (DICOM-V09-03-04)
382              Introduced G4UIExecutive.            332              Introduced G4UIExecutive.
383                                                   333 
384 06.06.2010 - Joseph Perl (DICOM-V09-03-03)        334 06.06.2010 - Joseph Perl (DICOM-V09-03-03)
385        Remove unused variable in EventAction      335        Remove unused variable in EventAction
386                                                   336 
387 03.06.2010 - Joseph Perl (DICOM-V09-03-02)        337 03.06.2010 - Joseph Perl (DICOM-V09-03-02)
388        Updated vis usage                          338        Updated vis usage
389                                                   339 
390 19.11.2009 - StÈphane Chauvie (DICOM-V09-03-0    340 19.11.2009 - StÈphane Chauvie (DICOM-V09-03-00)
391 01.06.2010 - Stephane Chauvie - Andrea Armando    341 01.06.2010 - Stephane Chauvie - Andrea Armando
392        Added function to read nested items (de    342        Added function to read nested items (defined and undefined)
393        Removed dependencies on CONQUEST           343        Removed dependencies on CONQUEST
394        DICOM handler could now read whichever     344        DICOM handler could now read whichever DICOM file
395              (PT,CT,DR,CR,US,MR... )              345              (PT,CT,DR,CR,US,MR... )
396                                                   346 
397 19.11.2009 - Stephanee Chauvie (DICOM-V09-02-0    347 19.11.2009 - Stephanee Chauvie (DICOM-V09-02-03)
398        Changed DICOM Handler to read CT files     348        Changed DICOM Handler to read CT files coming from CONQUEST
399              DICOM server                         349              DICOM server
400                                                   350 
401 05.02.2009 - Pedro Arce (DICOM-V09-02-01)         351 05.02.2009 - Pedro Arce (DICOM-V09-02-01)
402              Added report on dose per voxel.      352              Added report on dose per voxel.
403              Added warning for erroneous inclu    353              Added warning for erroneous inclusion of development code in
404              release 9.2 (to be removed when f    354              release 9.2 (to be removed when fix will be included in patch).
405                                                   355 
406 27.01.2009 - Gabriele Cosmo (DICOM-V09-02-00)     356 27.01.2009 - Gabriele Cosmo (DICOM-V09-02-00)
407              Use new class G4RegularNavigation    357              Use new class G4RegularNavigationHistory for counting of step
408              lengths in voxels of the regular     358              lengths in voxels of the regular structure.
409                                                   359 
410 27.11.2008 - Pedro Arce (DICOM-V09-01-02)         360 27.11.2008 - Pedro Arce (DICOM-V09-01-02)
411              Included G4PSDoseDeposit_RegNav t    361              Included G4PSDoseDeposit_RegNav to distribute dose along voxels,
412        including msc and energy loss correctio    362        including msc and energy loss corrections, for the case of
413        skipping voxel with equal materials whe    363        skipping voxel with equal materials when using regular
414        navigation                                 364        navigation
415                                                   365 
416 21.07.2008 - Pedro Arce (DICOM-V09-01-01)         366 21.07.2008 - Pedro Arce (DICOM-V09-01-01)
417              Bug fix in DicomNestedPhantomPara    367              Bug fix in DicomNestedPhantomParameterisation in calculating the
418              'copyNo', so that material assign    368              'copyNo', so that material assignment was wrong
419              Set default cut to 1 mm (with pre    369              Set default cut to 1 mm (with previous 1.E-3 mm too much time is
420              spent on physics and no improveme    370              spent on physics and no improvement is seen with different
421              navigation options).                 371              navigation options).
422              Corrected direction and position     372              Corrected direction and position of primary particles so that
423              they traverse the DICOM voxels.      373              they traverse the DICOM voxels.
424                                                   374 
425 22.01.2008 - Pedro Arce (DICOM-V09-01-00)         375 22.01.2008 - Pedro Arce (DICOM-V09-01-00)
426              Do not use 'rindex' in DicomHandl    376              Do not use 'rindex' in DicomHandler class to avoid problems
427              on Windows.                          377              on Windows.
428                                                   378 
429 06.12.2007 - Pedro Arce                           379 06.12.2007 - Pedro Arce
430              Added voxel colouring by material    380              Added voxel colouring by material. Added possibility to use nested parameterisation
431                                                   381 
432 05.12.2007 - Pedro Arce                           382 05.12.2007 - Pedro Arce
433              Deep review on the input files an    383              Deep review on the input files and the way how the geometry is built.
434              Use of G4PhantomParameterisation     384              Use of G4PhantomParameterisation and G4RegularNavigation.
435                                                   385 
436 06.12.2005 - Gabriele Cosmo                       386 06.12.2005 - Gabriele Cosmo
437              Trivial changes for support of CL    387              Trivial changes for support of CLHEP-2.0.X series.
438                                                   388 
439 29.11.2005 - Susanna Guatelli (DICOM-V07-01-00    389 29.11.2005 - Susanna Guatelli (DICOM-V07-01-00)
440              Documentation update                 390              Documentation update
441                                                   391 
442 12.06.2005 - Stephane Chauvie (DICOM-V07-00-01    392 12.06.2005 - Stephane Chauvie (DICOM-V07-00-01)
443              Added improvement by Akinori Kimu    393              Added improvement by Akinori Kimura.
444                                                   394 
445 03.05.2005 - John Allison                         395 03.05.2005 - John Allison
446              Replaced vis manager with G4VisEx    396              Replaced vis manager with G4VisExecutive.
447                                                   397 
448 10.12.2004 - Maria Grazia Pia (DICOM-V06-02-02    398 10.12.2004 - Maria Grazia Pia (DICOM-V06-02-02)
449              Update README to announce further    399              Update README to announce further improvements and fixes
450              by Akinori Kimura.                   400              by Akinori Kimura.
451                                                   401 
452 3.12.2004 - Gabriele Cosmo (DICOM-V06-02-01)      402 3.12.2004 - Gabriele Cosmo (DICOM-V06-02-01)
453             Implemented migration to <cmath>.     403             Implemented migration to <cmath>.
454                                                   404 
455 13.5.2004 - Susanna Guatelli                      405 13.5.2004 - Susanna Guatelli
456             updated compiler: gcc3.2.3            406             updated compiler: gcc3.2.3
457                                                   407 
458 11.3.2003 - Susanna Guatelli                      408 11.3.2003 - Susanna Guatelli
459             README changed                        409             README changed
460                                                   410 
461 6.2003 - Susanna Guatelli                         411 6.2003 - Susanna Guatelli
462          First public release of the example      412          First public release of the example