Geant4 Cross Reference

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Geant4/examples/extended/medical/DICOM/History

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Diff markup

Differences between /examples/extended/medical/DICOM/History (Version 11.3.0) and /examples/extended/medical/DICOM/History (Version 10.6.p3)


  1 # Example DICOM History                        <<   1 -------------------------------------------------------------------
  2                                                     2 
  3 See `CONTRIBUTING.rst` for details of **requir <<   3      =========================================================
  4 which **must** added in reverse chronological  <<   4           Geant4 - DICOM example
  5 It must **not** be used as a substitute for wr <<   5      =========================================================
  6                                                     6 
  7 ---------------------------------------------- <<   7                       Category History file
  8                                                << 
  9 ## 2024-06-05 L. T. Anh (DICOM-V11-02-00)      << 
 10 - Correct symbols for Chlorine and Potassium e << 
 11   InitialisationOfMaterials().                 << 
 12                                                << 
 13 ## 2023-12-03 A. Howard (DICOM-V11-01-02)      << 
 14 - Modified DicomDetectorConstruction: added co << 
 15   of G4PSDoseDeposit3D for nested parameterisa << 
 16   according to the fixed formula within G4PSDo << 
 17   variable to switch to standard G4PSDoseDepos << 
 18   navigation (default).                        << 
 19 - Updated README and .README to be more correc << 
 20   G4PSDoseDeposit3D and its usage for nested p << 
 21                                                << 
 22 ## 2023-11-25 C. Mancini (DICOM-V11-01-01)     << 
 23 - Modified DicomNestedPhantomParameterisation: << 
 24   from the  "G4Material* mate" instantiation.  << 
 25                                                << 
 26 ## 2023-09-02 Gabriele Cosmo (DICOM-V11-01-00) << 
 27 - Removed forward declaration for G4VTouchable << 
 28                                                << 
 29 ## 2022-10-04 John Allison (DICOM-V11-00-04)   << 
 30 - Introduce special mesh rendering of DICOM im << 
 31                                                << 
 32 ## 2022-10-24 I. Hrivnacova  (DICOM-V11-00-03) << 
 33 - Coding guidelines: start data member with 'f << 
 34   (skipped dicomReader classes).               << 
 35                                                << 
 36 ## 2022-10-04 Ben Morgan (DICOM-V11-00-02)     << 
 37 - Replace sprintf with direct G4String use to  << 
 38   macOS-13.                                    << 
 39                                                << 
 40 ## 2022-10-04 Gabriele Cosmo (DICOM-V11-00-01) << 
 41 - Fixed compilation warning on Intel-icx compi << 
 42   in DicomHandler::ReadData().                 << 
 43                                                << 
 44 ## 2021-12-10 Ben Morgan (DICOM-V11-00-00)     << 
 45 - Change to new Markdown History format.       << 
 46                                                << 
 47 ---                                            << 
 48                                                << 
 49 # History entries prior to 11.0                << 
 50                                                << 
 51 27.09.2021  Pedro Arce (DICOM-V10-07-01)       << 
 52 - Use updated interface from geomnav to use G4 << 
 53                                                << 
 54 31.12.2020 - John Allison (DICOM-V10-07-00)    << 
 55              vis.mac: "Change /vis/ogl/set/eve << 
 56              "/vis/ogl/flushAt NthPrimitive".  << 
 57                                                << 
 58 10.11.2020 - Ben Morgan (DICOM-V10-06-01)      << 
 59              Migration to G4RunManagerFactory. << 
 60                                                << 
 61 21.10.2020 - Ben Morgan (DICOM-V10-06-00)      << 
 62              Distinguish output names of archi << 
 63              fix Windows LNK1149 errors for st << 
 64              Modernize cmake version detection << 
 65              Geant4 usage.                     << 
 66                                                     8 
 67 19.11.2019 - Gabriele Cosmo (DICOM-V10-05-03)       9 19.11.2019 - Gabriele Cosmo (DICOM-V10-05-03)
 68              Fixed more cases of implicit type     10              Fixed more cases of implicit type conversions.
 69              Some minor code cleanup.              11              Some minor code cleanup.
 70                                                    12 
 71 15.11.2019 - Gabriele Cosmo (DICOM-V10-05-02)      13 15.11.2019 - Gabriele Cosmo (DICOM-V10-05-02)
 72              Fixed cases of implicit type conv     14              Fixed cases of implicit type conversions from size_t to G4int.
 73                                                    15 
 74 12.11.2019 - Gunter Folger (DICOM-V10-05-01)       16 12.11.2019 - Gunter Folger (DICOM-V10-05-01)
 75              Correct DicomHandler singleton fo     17              Correct DicomHandler singleton for use on Windows.
 76        DICOM2 was crashing                     <<  18        DICOM2 was crashing 
 77                                                <<  19        
 78 08.06.2019 - Gabriele Cosmo (DICOM-V10-05-00)      20 08.06.2019 - Gabriele Cosmo (DICOM-V10-05-00)
 79              Defaulted copy-ctr in DicomPhanto     21              Defaulted copy-ctr in DicomPhantomZSliceHeader, to fix deprecation
 80              compilation warnings on gcc-9.1.      22              compilation warnings on gcc-9.1.
 81                                                    23 
 82 13.11.2018 - Jonathan Madsen (DICOM-V10-04-11)     24 13.11.2018 - Jonathan Madsen (DICOM-V10-04-11)
 83              Bugfix (2102) to DicomHandler rea     25              Bugfix (2102) to DicomHandler reading fPixelSpacingY
 84                                                    26 
 85 13.11.2018 - Jonathan Madsen (DICOM-V10-04-10)     27 13.11.2018 - Jonathan Madsen (DICOM-V10-04-10)
 86              Bugfix (2101) to DicomHandler ski     28              Bugfix (2101) to DicomHandler skipping 2 bytes in implicit VR
 87                                                    29 
 88 12.11.2018 - Jonathan Madsen (DICOM-V10-04-09)     30 12.11.2018 - Jonathan Madsen (DICOM-V10-04-09)
 89              Updated DICOMUtilities.cmake to h     31              Updated DICOMUtilities.cmake to handle Windows builds
 90              Using modern CMake DICOM::target      32              Using modern CMake DICOM::target library alias
 91                                                    33 
 92 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-08)      34 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-08)
 93              DicomDetectorConstruction: remove     35              DicomDetectorConstruction: removed useless static Instance()
 94              method.                               36              method.
 95                                                    37 
 96 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-07)      38 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-07)
 97              DicomPartialDetectorConstruction:     39              DicomPartialDetectorConstruction: fixed shadowing of base class
 98              data for 'fMateIDs'. Fixed type c     40              data for 'fMateIDs'. Fixed type conversion unsigned_int -> int.
 99                                                    41 
100 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-06)      42 12.11.2018 - Gabriele Cosmo (DICOM-V10-04-06)
101              DicomNestedPhantomParameterisatio     43              DicomNestedPhantomParameterisation: removed useless statement
102              causing compilation error on Linu     44              causing compilation error on Linux.
103                                                    45 
104 10.11.2018 - Jonathan Madsen (DICOM-V10-04-05)     46 10.11.2018 - Jonathan Madsen (DICOM-V10-04-05)
105              DICOMConfig.cmake.in handles DICO     47              DICOMConfig.cmake.in handles DICOM_USE_HEAD being set
106              DownloadDICOMData.cmake does inst     48              DownloadDICOMData.cmake does installation
107              CMakeLists.txt creates build-tree     49              CMakeLists.txt creates build-tree export
108              DicomDetectorConstruction is glob     50              DicomDetectorConstruction is globally accessible
109              DicomHandler implements GetDicomD     51              DicomHandler implements GetDicomData{Path,File}
110                which provides a fallback path      52                which provides a fallback path to data libraries
111                directory for DICOM2 and handle     53                directory for DICOM2 and handles DICOM_USE_HEAD situation
112              Phantom parameterization classes      54              Phantom parameterization classes take an argument
113                specifying color file               55                specifying color file
114              fDcmrun is protected instead of p     56              fDcmrun is protected instead of private (for DICOM2)
115              DicomEventAction doesn't print ev     57              DicomEventAction doesn't print every event
116              Removed DicomRun::RecordEvent inc     58              Removed DicomRun::RecordEvent incrementing numberOfEvent
117                (done by G4Run::RecordEvent)        59                (done by G4Run::RecordEvent)
118              Cleaned up output (when provided      60              Cleaned up output (when provided along with DICOM2 output
119                it was too excessive) now just      61                it was too excessive) now just a summary is provided
120                and per-voxel is output to file     62                and per-voxel is output to file only
121              Moved Data.dat to Data.dat.old an     63              Moved Data.dat to Data.dat.old and CMake copies correct
122                Data.dat.{old,new} to Data.dat      64                Data.dat.{old,new} to Data.dat in binary directory based
123                on DICOM_USE_DCMTK setting          65                on DICOM_USE_DCMTK setting
124              Updated README                        66              Updated README
125                                                    67 
126 09.11.2018 - Gabriele Cosmo (DICOM-V10-04-04)      68 09.11.2018 - Gabriele Cosmo (DICOM-V10-04-04)
127              Use canonical definition for DICO     69              Use canonical definition for DICOMRunAction; removed wrong
128              singleton specification (in any c     70              singleton specification (in any case not necessary).
129                                                    71 
130 22.06.2018 - Jonathan Madsen (DICOM-V10-04-03)     72 22.06.2018 - Jonathan Madsen (DICOM-V10-04-03)
131              Added dicomReader/cmake/DICOMUtil     73              Added dicomReader/cmake/DICOMUtilities.cmake that defines
132              a DICOM_BUILD_LIBRARY macro which     74              a DICOM_BUILD_LIBRARY macro which handles how to build
133              DICOM-library (and dicomReader li     75              DICOM-library (and dicomReader library if USE_DICOM_DCMTK=ON)
134              based on the Geant4 installation      76              based on the Geant4 installation (e.g. build shared, static, or
135              both) + updates to DICOMConfig.cm     77              both) + updates to DICOMConfig.cmake.in and
136              dicomReaderConfig.cmake.in to han     78              dicomReaderConfig.cmake.in to handle which library type to
137              use link to                           79              use link to
138                                                    80 
139 20.05.2018 - John Allison (DICOM-V10-04-02)        81 20.05.2018 - John Allison (DICOM-V10-04-02)
140              Remove G4UI_USE and G4VIS_USE.        82              Remove G4UI_USE and G4VIS_USE.
141              Move instantiation of G4UIExecuti     83              Move instantiation of G4UIExecutive to start of main.
142                                                    84 
143 09.05.2018 - Ben Morgan (DICOM-V10-04-01)          85 09.05.2018 - Ben Morgan (DICOM-V10-04-01)
144              Include G4Types before use of G4M     86              Include G4Types before use of G4MULTITHREADED. For forward
145              compatibility with move to #defin     87              compatibility with move to #defines over -D for G4 preprocessor
146              symbols.                              88              symbols.
147                                                    89 
148 20.03.2018 - Jonathan Madsen (DICOM-V10-04-00)     90 20.03.2018 - Jonathan Madsen (DICOM-V10-04-00)
149              Enabled CMake package configurati     91              Enabled CMake package configuration
150              Added DICOM_USE_DCMTK and DICOM_U     92              Added DICOM_USE_DCMTK and DICOM_USE_HEAD CMake
151               options back-compat with environ     93               options back-compat with environment variables
152              Updated README and .README.txt        94              Updated README and .README.txt
153                                                    95 
154 11.11.2017 - Marc Verderi (DICOM-V10-03-12)        96 11.11.2017 - Marc Verderi (DICOM-V10-03-12)
155              Retag as DICOM-V10-03-11 too quic     97              Retag as DICOM-V10-03-11 too quickly rejected
156                                                    98 
157 09.11.2017 - Ivana Hrivnacova (DICOM-V10-03-11     99 09.11.2017 - Ivana Hrivnacova (DICOM-V10-03-11)
158              Updated DICOM data version to 1.1    100              Updated DICOM data version to 1.1
159                                                   101 
160 09.11.2017 - S. Guatelli (DICOM-V10-03-10)        102 09.11.2017 - S. Guatelli (DICOM-V10-03-10)
161              Updated README and .README.txt       103              Updated README and .README.txt
162                                                   104 
163 09.11.2017 - S. Guatelli (DICOM-V10-03-09)        105 09.11.2017 - S. Guatelli (DICOM-V10-03-09)
164              .g4dmc created in the user direct    106              .g4dmc created in the user directory and not in the DICOM library,
165              together with the .g4dcmb files.     107              together with the .g4dcmb files.
166                                                   108 
167 09.11.2017 - S. Guatelli (DICOM-V10-03-08)        109 09.11.2017 - S. Guatelli (DICOM-V10-03-08)
168              DICOM_PATH changed                   110              DICOM_PATH changed
169              no writing .g4dcmb in the library    111              no writing .g4dcmb in the library DICOM
170                                                   112 
171 08.11.2017 - Ivana Hrivnacova (DICOM-V10-03-07    113 08.11.2017 - Ivana Hrivnacova (DICOM-V10-03-07)
172              Added downloading DICOM data in C    114              Added downloading DICOM data in CMake build
173              (used only with DICOM_USE_HEAD op    115              (used only with DICOM_USE_HEAD option)
174                                                   116 
175 07.11.2017 - S. Guatelli (DICOM-V10-03-06).       117 07.11.2017 - S. Guatelli (DICOM-V10-03-06).
176              Warning deleted, updated README a    118              Warning deleted, updated README and .README.txt
177                                                   119 
178 01.11.2017 - S. Guatelli (DICOM-V10-03-05).       120 01.11.2017 - S. Guatelli (DICOM-V10-03-05).
179              DICOM_HEAD library can be used as    121              DICOM_HEAD library can be used as input to the DICOM
180              DICOM_v1 does not need to be copi    122              DICOM_v1 does not need to be copied in the directory where the simulation is executed
181                                                   123 
182 01.11.2017 - S. Guatelli (DICOM-V10-03-04). DI    124 01.11.2017 - S. Guatelli (DICOM-V10-03-04). DICOM_HEAD library can be used as input to the DICOM
183                                                   125 
184 28.09.2017 - S. Guatelli (DICOM-V10-03-03). DI    126 28.09.2017 - S. Guatelli (DICOM-V10-03-03). DICOM_HEAD Directory deleted
185                                                   127 
186 16.09.2017 - S. Guatelli (DICOM-V10-03-02)        128 16.09.2017 - S. Guatelli (DICOM-V10-03-02)
187            - New DICOM Digital Head included b    129            - New DICOM Digital Head included by S. Guatelli
188            - Updated README, .README.txt          130            - Updated README, .README.txt
189                                                   131 
190 19.11.2016 - Andrea Dotti     (DICOM-V10-02-04    132 19.11.2016 - Andrea Dotti     (DICOM-V10-02-04)
191            - explicit set of SD to manager        133            - explicit set of SD to manager
192                                                   134 
193 11.11.2016 - Ivana Hrivnacova (DICOM-V10-02-03    135 11.11.2016 - Ivana Hrivnacova (DICOM-V10-02-03)
194            - Removed extra compiler flags in G    136            - Removed extra compiler flags in GNUmakefile, CMakeLists.txt
195              (not needed)                         137              (not needed)
196            - Renamed G4_USE_DCMTK in DICOM_USE    138            - Renamed G4_USE_DCMTK in DICOM_USE_DCMTK
197            - Updated README, .README.txt          139            - Updated README, .README.txt
198                                                   140 
199 11.11.2016 - Pedro Arce (DICOM-V10-02-02)         141 11.11.2016 - Pedro Arce (DICOM-V10-02-02)
200            - Complying with Geant4 guidelines     142            - Complying with Geant4 guidelines in data variables
201                                                   143 
202 04.11.2016 - Pedro Arce (DICOM-V10-02-01)         144 04.11.2016 - Pedro Arce (DICOM-V10-02-01)
203            - New DICOM reader based on DCMTK      145            - New DICOM reader based on DCMTK
204                                                   146 
205 20.07.2016 - Ivana Hrivnacova (DICOM-V10-02-00    147 20.07.2016 - Ivana Hrivnacova (DICOM-V10-02-00)
206            - Fixed coding guidelines              148            - Fixed coding guidelines
207              (redundant empty lines, class dat    149              (redundant empty lines, class data member names)
208                                                   150 
209 17.09.2015 - Pedro Arce (DICOM-V10-01-01)         151 17.09.2015 - Pedro Arce (DICOM-V10-01-01)
210            - Fixed coding guidelines (long lin    152            - Fixed coding guidelines (long lines)
211                                                   153 
212 21.10.2014 - Pedro Arce (DICOM-V10-00-04)         154 21.10.2014 - Pedro Arce (DICOM-V10-00-04)
213            - Fixed coding guidelines (long lin    155            - Fixed coding guidelines (long lines)
214                                                   156 
215 16.10.2014 - Ivana Hrivnacova (DICOM-V10-00-03    157 16.10.2014 - Ivana Hrivnacova (DICOM-V10-00-03)
216            - Fixed coding guidelines (long lin    158            - Fixed coding guidelines (long lines) in
217              DicomPartialDetectorConstruction.    159              DicomPartialDetectorConstruction.hh, DicomPhantomZSliceHeader.hh
218                                                   160 
219 29.07.2014 - Pedro Arce (DICOM-V10-00-02)         161 29.07.2014 - Pedro Arce (DICOM-V10-00-02)
220            - Remove DicomPhysicsList              162            - Remove DicomPhysicsList
221                                                   163 
222 25.07.2014 - Pedro Arce (DICOM-V10-00-01)         164 25.07.2014 - Pedro Arce (DICOM-V10-00-01)
223            - Using G4GenericPhysicsList           165            - Using G4GenericPhysicsList
224          - no std::cout                           166          - no std::cout
225      - no exit()                                  167      - no exit()
226                                                   168 
227 03.12.2013 - Gabriele Cosmo (DICOM-V10-00-00)     169 03.12.2013 - Gabriele Cosmo (DICOM-V10-00-00)
228            - Attempt to fix Valgrind run-time     170            - Attempt to fix Valgrind run-time error from printout in
229              DicomHandler::CheckFileFormat().     171              DicomHandler::CheckFileFormat().
230                                                   172 
231 03.12.2013 - Ivana Hrivnacova (DICOM-V09-06-09    173 03.12.2013 - Ivana Hrivnacova (DICOM-V09-06-09)
232            - Updated README and .README to mat    174            - Updated README and .README to match (Pedro Arce)
233                                                   175 
234 18.11.2014 - Ivana Hrivnacova (DICOM-V09-06-08    176 18.11.2014 - Ivana Hrivnacova (DICOM-V09-06-08)
235            - Fixed DicomPhantomZSliceMerged.hh    177            - Fixed DicomPhantomZSliceMerged.hh file description
236              (for Doxygen)                        178              (for Doxygen)
237                                                   179 
238 13.11.2014 - Jonathan Mdsen (DICOM-V09-06-07)     180 13.11.2014 - Jonathan Mdsen (DICOM-V09-06-07)
239            - Updated README and .README           181            - Updated README and .README
240            - Fixed some comments                  182            - Fixed some comments
241                                                   183 
242 04.11.2013 - Dennis Wright  (DICOM-V09-06-06)     184 04.11.2013 - Dennis Wright  (DICOM-V09-06-06)
243            - replaced LEP model for alphas by     185            - replaced LEP model for alphas by extending Binary cascade to
244              zero energy                          186              zero energy
245            - updated sample output files to re    187            - updated sample output files to reflect this
246                                                   188 
247 23.10.2013 - Gabriele Cosmo (DICOM-V09-06-05)     189 23.10.2013 - Gabriele Cosmo (DICOM-V09-06-05)
248      - Fixed compilation warnings.                190      - Fixed compilation warnings.
249                                                   191 
250 15.10.2013 - Jonathan Madsen (DICOM-V09-06-04)    192 15.10.2013 - Jonathan Madsen (DICOM-V09-06-04)
251      - Modified DICOM to enable multithreading    193      - Modified DICOM to enable multithreading
252        - Adapted scorers                          194        - Adapted scorers
253        - Added ActionInitialization class         195        - Added ActionInitialization class
254        - Modified RunAction to handle master a    196        - Modified RunAction to handle master and daughter threads
255                                                   197 
256 09.10.2013 - Ivana Hrivnacova (DICOM-V09-06-03    198 09.10.2013 - Ivana Hrivnacova (DICOM-V09-06-03)
257            Fixed file description (DicomPhanto    199            Fixed file description (DicomPhantomZSliceMerged.hh)
258                                                   200 
259 28.08.2013 - Gabriele Cosmo (DICOM-V09-06-02)     201 28.08.2013 - Gabriele Cosmo (DICOM-V09-06-02)
260            Added G4Ellipsoid to solids enabled    202            Added G4Ellipsoid to solids enabled for parameterisation in
261            DicomNestedPhantomParameterisation.    203            DicomNestedPhantomParameterisation.
262                                                   204 
263 29.07.2013 - Peter Gumplinger (DICOM-V09-06-01    205 29.07.2013 - Peter Gumplinger (DICOM-V09-06-01)
264            Fixed MAC/clang32 compilation warni    206            Fixed MAC/clang32 compilation warnings in DicomRunAction and
265            DiconIntersectVolume classes           207            DiconIntersectVolume classes
266                                                   208 
267 18.07.2013 - Jonathan Madsen                      209 18.07.2013 - Jonathan Madsen
268            Missing documentation update from 1    210            Missing documentation update from 18.12.2012:
269              Improvements and bug-fixes ->        211              Improvements and bug-fixes ->
270              DicomHandler had some bugs when u    212              DicomHandler had some bugs when using DCM files
271                other than examples provided       213                other than examples provided
272              Added DicomPhantomZSliceMerged cl    214              Added DicomPhantomZSliceMerged class to handle
273                inconsistencies in DCM file met    215                inconsistencies in DCM file meta-data
274              DicomPhantomZSliceHeader class is    216              DicomPhantomZSliceHeader class is extended to hold density
275                and material ID data and the pr    217                and material ID data and the printing of data
276                to files instead of DicomHandle    218                to files instead of DicomHandler
277            Removed additions on 16.07.2013 pen    219            Removed additions on 16.07.2013 pending further discussion
278            Reverted DICOM example to 18.12.201    220            Reverted DICOM example to 18.12.2012 update with some very
279              minor tweaks                         221              minor tweaks
280            Kept share folder with additional a    222            Kept share folder with additional anonymous DCM files
281              and additional data files (SixSli    223              and additional data files (SixSlice.dat, AltData.dat). Rename
282              these files with Data.dat to use     224              these files with Data.dat to use
283            Kept CMakeLists.txt to copy over ex    225            Kept CMakeLists.txt to copy over extra data file and anonymous
284              DCM files                            226              DCM files
285                                                   227 
286 16.07.2013 - Jonathan Madsen                      228 16.07.2013 - Jonathan Madsen
287            Many modifications to the DICOM exa    229            Many modifications to the DICOM example.
288            Added more anonymous DICOM files.      230            Added more anonymous DICOM files.
289            Added more script configurations.      231            Added more script configurations.
290            Added DicomCommandLineOptions, Dico    232            Added DicomCommandLineOptions, DicomHelpers, DicomTypeConversion,
291              DicomOption as part of a command     233              DicomOption as part of a command line processing package.
292            Modified CMakeLists.txt to configur    234            Modified CMakeLists.txt to configure extra files.
293            Added capability to use different d    235            Added capability to use different data files for DICOM set,
294              CT2Density file, ColourMap file.     236              CT2Density file, ColourMap file.
295            Added Statistical Analysis and Stat    237            Added Statistical Analysis and Statistical Manager classes
296            Miscellaneous improvements.            238            Miscellaneous improvements.
297            DICOM.cc now has a large list of ru    239            DICOM.cc now has a large list of runtime configuration options
298              via command line.                    240              via command line.
299            Options set at command line are set    241            Options set at command line are set to override environment
300              variables.                           242              variables.
301                                                   243 
302 15.02.2013 - Ivana Hrivnacova (DICOM-V09-06-00    244 15.02.2013 - Ivana Hrivnacova (DICOM-V09-06-00)
303            Applied coding guidelines (virtual     245            Applied coding guidelines (virtual keyword, data members
304            names and initialization)              246            names and initialization)
305                                                   247 
306 07.11.2012 - Gabriele Cosmo (DICOM-V09-05-10)     248 07.11.2012 - Gabriele Cosmo (DICOM-V09-05-10)
307            Fixed compilation warnings for shad    249            Fixed compilation warnings for shadowing of variables and unused
308            return flag from system calls.         250            return flag from system calls.
309                                                   251 
310 18.10.2012 - Ivana Hrivnacova (DICOM-V09-05-09    252 18.10.2012 - Ivana Hrivnacova (DICOM-V09-05-09)
311      Updated CMakeLists.txt: added copying dat    253      Updated CMakeLists.txt: added copying data files to the build
312            area as they are needed to run the     254            area as they are needed to run the tests.
313                                                   255 
314 13.10.2012 - Andrea Dotti (DICOM-V09-05-08)       256 13.10.2012 - Andrea Dotti (DICOM-V09-05-08)
315      Removing previous tag modification (not n    257      Removing previous tag modification (not needed)
316                                                   258 
317 13.10.2012 - Andrea Dotti (DICOM-V09-05-07)       259 13.10.2012 - Andrea Dotti (DICOM-V09-05-07)
318        Adding explicit use of system of units     260        Adding explicit use of system of units
319                                                   261 
320 05.09.2012 - Ivana Hrivnacova (DICOM-V09-05-06    262 05.09.2012 - Ivana Hrivnacova (DICOM-V09-05-06)
321              Fixed compiler warning               263              Fixed compiler warning
322                                                   264 
323 04.09.2012 - Pedro Arce    (DICOM-V09-05-05)      265 04.09.2012 - Pedro Arce    (DICOM-V09-05-05)
324              Remove old renamed files             266              Remove old renamed files
325              Updated CMakeLists.txt (By I.Hriv    267              Updated CMakeLists.txt (By I.Hrivnacova)
326              Adding visualization, copying mac    268              Adding visualization, copying macros, install target and
327              comment lines                        269              comment lines
328                                                   270 
329 17.07.2012 - Ivana Hrivnacova (DICOM-V09-05-04    271 17.07.2012 - Ivana Hrivnacova (DICOM-V09-05-04)
330              Improved README files                272              Improved README files
331                                                   273 
332 06.07.2012 - Pedro Arce    (DICOM-V09-05-03)      274 06.07.2012 - Pedro Arce    (DICOM-V09-05-03)
333              Reviewed examples according to co    275              Reviewed examples according to coding guidelines
334                                                   276 
335 13.06.2012 - Gabriele Cosmo   (DICOM-V09-05-02    277 13.06.2012 - Gabriele Cosmo   (DICOM-V09-05-02)
336              Assign return value for fread() a    278              Assign return value for fread() and fscanf() calls in
337              DicomHandler. Fixes compilation w    279              DicomHandler. Fixes compilation warnings on Ubuntu.
338                                                   280 
339 28.03.2012 - Pedro Arce   (DICOM-V09-05-01)       281 28.03.2012 - Pedro Arce   (DICOM-V09-05-01)
340              Corrections in materials Z/A. Add    282              Corrections in materials Z/A. Addressing problem report #1287.
341                                                   283 
342 13.11.2011 - Pedro Arce   (DICOM-V09-04-03)       284 13.11.2011 - Pedro Arce   (DICOM-V09-04-03)
343              Migration to new G4Exception sche    285              Migration to new G4Exception scheme.
344                                                   286 
345 03.10.2011 - G.Folger   (DICOM-V09-04-02)         287 03.10.2011 - G.Folger   (DICOM-V09-04-02)
346              Fix gcc46 compilation warning in     288              Fix gcc46 compilation warning in DicomHandler.cc
347              and DicomPhantomParameterisationC    289              and DicomPhantomParameterisationColour.cc
348                                                   290 
349 05.06.2011 - Pedro Arce (DICOM-V09-04-01)         291 05.06.2011 - Pedro Arce (DICOM-V09-04-01)
350              Corrected name for sensitive dete    292              Corrected name for sensitive detector to be consistently
351              named as "phantomSD" in DicomRunA    293              named as "phantomSD" in DicomRunAction. Addressing problem
352              report #1210.                        294              report #1210.
353              Corrected axis slicing hint in ne    295              Corrected axis slicing hint in nested-parameterisation.
354                                                   296 
355 23.12.2010 - Stephane Chauvie                     297 23.12.2010 - Stephane Chauvie
356              Corrected 2 bugs in DicomHandler     298              Corrected 2 bugs in DicomHandler
357                                                   299 
358 30.11.2010 - John Allison                         300 30.11.2010 - John Allison
359              dicom.cc: Removed redundant heade    301              dicom.cc: Removed redundant headers:
360              "G4UIterminal.hh" and "G4UItcsh.h    302              "G4UIterminal.hh" and "G4UItcsh.hh".
361                                                   303 
362 30.11.2010 - Ivana Hrivnacova (DICOM-V09-03-09    304 30.11.2010 - Ivana Hrivnacova (DICOM-V09-03-09)
363              Moved inclusion of vis headers as    305              Moved inclusion of vis headers as last in main().
364                                                   306 
365 26.11.2010 - Pedro Arce (DICOM-V09-03-08)         307 26.11.2010 - Pedro Arce (DICOM-V09-03-08)
366        Correction of warnings                     308        Correction of warnings
367                                                   309 
368 24.11.2010 - Pedro Arce (DICOM-V09-03-07)         310 24.11.2010 - Pedro Arce (DICOM-V09-03-07)
369        Introduced partial phantom example         311        Introduced partial phantom example
370        Delete G4PSDoseDeposit_RegNav and use G    312        Delete G4PSDoseDeposit_RegNav and use G4ScoreSplittingProcess instead
371                                                   313 
372 11.11.2010 - Gabriele Cosmo (DICOM-V09-03-06)     314 11.11.2010 - Gabriele Cosmo (DICOM-V09-03-06)
373              Corrected vis.mac macro and set O    315              Corrected vis.mac macro and set OGL as default viewer.
374              Corrected some printouts in code.    316              Corrected some printouts in code...
375                                                   317 
376 09.11.2010 - Gabriele Cosmo (DICOM-V09-03-05)     318 09.11.2010 - Gabriele Cosmo (DICOM-V09-03-05)
377              Fixed compilation warning on virt    319              Fixed compilation warning on virtual methods hiding
378              Fixed compilation warnings in Dic    320              Fixed compilation warnings in DicomPhantomParameterisationColour
379              and DicomHandler.                    321              and DicomHandler.
380                                                   322 
381 02.11.2010 - John Allison (DICOM-V09-03-04)       323 02.11.2010 - John Allison (DICOM-V09-03-04)
382              Introduced G4UIExecutive.            324              Introduced G4UIExecutive.
383                                                   325 
384 06.06.2010 - Joseph Perl (DICOM-V09-03-03)        326 06.06.2010 - Joseph Perl (DICOM-V09-03-03)
385        Remove unused variable in EventAction      327        Remove unused variable in EventAction
386                                                   328 
387 03.06.2010 - Joseph Perl (DICOM-V09-03-02)        329 03.06.2010 - Joseph Perl (DICOM-V09-03-02)
388        Updated vis usage                          330        Updated vis usage
389                                                   331 
390 19.11.2009 - StÈphane Chauvie (DICOM-V09-03-0    332 19.11.2009 - StÈphane Chauvie (DICOM-V09-03-00)
391 01.06.2010 - Stephane Chauvie - Andrea Armando    333 01.06.2010 - Stephane Chauvie - Andrea Armando
392        Added function to read nested items (de    334        Added function to read nested items (defined and undefined)
393        Removed dependencies on CONQUEST           335        Removed dependencies on CONQUEST
394        DICOM handler could now read whichever     336        DICOM handler could now read whichever DICOM file
395              (PT,CT,DR,CR,US,MR... )              337              (PT,CT,DR,CR,US,MR... )
396                                                   338 
397 19.11.2009 - Stephanee Chauvie (DICOM-V09-02-0    339 19.11.2009 - Stephanee Chauvie (DICOM-V09-02-03)
398        Changed DICOM Handler to read CT files     340        Changed DICOM Handler to read CT files coming from CONQUEST
399              DICOM server                         341              DICOM server
400                                                   342 
401 05.02.2009 - Pedro Arce (DICOM-V09-02-01)         343 05.02.2009 - Pedro Arce (DICOM-V09-02-01)
402              Added report on dose per voxel.      344              Added report on dose per voxel.
403              Added warning for erroneous inclu    345              Added warning for erroneous inclusion of development code in
404              release 9.2 (to be removed when f    346              release 9.2 (to be removed when fix will be included in patch).
405                                                   347 
406 27.01.2009 - Gabriele Cosmo (DICOM-V09-02-00)     348 27.01.2009 - Gabriele Cosmo (DICOM-V09-02-00)
407              Use new class G4RegularNavigation    349              Use new class G4RegularNavigationHistory for counting of step
408              lengths in voxels of the regular     350              lengths in voxels of the regular structure.
409                                                   351 
410 27.11.2008 - Pedro Arce (DICOM-V09-01-02)         352 27.11.2008 - Pedro Arce (DICOM-V09-01-02)
411              Included G4PSDoseDeposit_RegNav t    353              Included G4PSDoseDeposit_RegNav to distribute dose along voxels,
412        including msc and energy loss correctio    354        including msc and energy loss corrections, for the case of
413        skipping voxel with equal materials whe    355        skipping voxel with equal materials when using regular
414        navigation                                 356        navigation
415                                                   357 
416 21.07.2008 - Pedro Arce (DICOM-V09-01-01)         358 21.07.2008 - Pedro Arce (DICOM-V09-01-01)
417              Bug fix in DicomNestedPhantomPara    359              Bug fix in DicomNestedPhantomParameterisation in calculating the
418              'copyNo', so that material assign    360              'copyNo', so that material assignment was wrong
419              Set default cut to 1 mm (with pre    361              Set default cut to 1 mm (with previous 1.E-3 mm too much time is
420              spent on physics and no improveme    362              spent on physics and no improvement is seen with different
421              navigation options).                 363              navigation options).
422              Corrected direction and position     364              Corrected direction and position of primary particles so that
423              they traverse the DICOM voxels.      365              they traverse the DICOM voxels.
424                                                   366 
425 22.01.2008 - Pedro Arce (DICOM-V09-01-00)         367 22.01.2008 - Pedro Arce (DICOM-V09-01-00)
426              Do not use 'rindex' in DicomHandl    368              Do not use 'rindex' in DicomHandler class to avoid problems
427              on Windows.                          369              on Windows.
428                                                   370 
429 06.12.2007 - Pedro Arce                           371 06.12.2007 - Pedro Arce
430              Added voxel colouring by material    372              Added voxel colouring by material. Added possibility to use nested parameterisation
431                                                   373 
432 05.12.2007 - Pedro Arce                           374 05.12.2007 - Pedro Arce
433              Deep review on the input files an    375              Deep review on the input files and the way how the geometry is built.
434              Use of G4PhantomParameterisation     376              Use of G4PhantomParameterisation and G4RegularNavigation.
435                                                   377 
436 06.12.2005 - Gabriele Cosmo                       378 06.12.2005 - Gabriele Cosmo
437              Trivial changes for support of CL    379              Trivial changes for support of CLHEP-2.0.X series.
438                                                   380 
439 29.11.2005 - Susanna Guatelli (DICOM-V07-01-00    381 29.11.2005 - Susanna Guatelli (DICOM-V07-01-00)
440              Documentation update                 382              Documentation update
441                                                   383 
442 12.06.2005 - Stephane Chauvie (DICOM-V07-00-01    384 12.06.2005 - Stephane Chauvie (DICOM-V07-00-01)
443              Added improvement by Akinori Kimu    385              Added improvement by Akinori Kimura.
444                                                   386 
445 03.05.2005 - John Allison                         387 03.05.2005 - John Allison
446              Replaced vis manager with G4VisEx    388              Replaced vis manager with G4VisExecutive.
447                                                   389 
448 10.12.2004 - Maria Grazia Pia (DICOM-V06-02-02    390 10.12.2004 - Maria Grazia Pia (DICOM-V06-02-02)
449              Update README to announce further    391              Update README to announce further improvements and fixes
450              by Akinori Kimura.                   392              by Akinori Kimura.
451                                                   393 
452 3.12.2004 - Gabriele Cosmo (DICOM-V06-02-01)      394 3.12.2004 - Gabriele Cosmo (DICOM-V06-02-01)
453             Implemented migration to <cmath>.     395             Implemented migration to <cmath>.
454                                                   396 
455 13.5.2004 - Susanna Guatelli                      397 13.5.2004 - Susanna Guatelli
456             updated compiler: gcc3.2.3            398             updated compiler: gcc3.2.3
457                                                   399 
458 11.3.2003 - Susanna Guatelli                      400 11.3.2003 - Susanna Guatelli
459             README changed                        401             README changed
460                                                   402 
461 6.2003 - Susanna Guatelli                         403 6.2003 - Susanna Guatelli
462          First public release of the example      404          First public release of the example