| Geant4 Cross Reference |
1 // 1 //
2 // ******************************************* 2 // ********************************************************************
3 // * License and Disclaimer 3 // * License and Disclaimer *
4 // * 4 // * *
5 // * The Geant4 software is copyright of th 5 // * The Geant4 software is copyright of the Copyright Holders of *
6 // * the Geant4 Collaboration. It is provided 6 // * the Geant4 Collaboration. It is provided under the terms and *
7 // * conditions of the Geant4 Software License 7 // * conditions of the Geant4 Software License, included in the file *
8 // * LICENSE and available at http://cern.ch/ 8 // * LICENSE and available at http://cern.ch/geant4/license . These *
9 // * include a list of copyright holders. 9 // * include a list of copyright holders. *
10 // * 10 // * *
11 // * Neither the authors of this software syst 11 // * Neither the authors of this software system, nor their employing *
12 // * institutes,nor the agencies providing fin 12 // * institutes,nor the agencies providing financial support for this *
13 // * work make any representation or warran 13 // * work make any representation or warranty, express or implied, *
14 // * regarding this software system or assum 14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file 15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitatio 16 // * for the full disclaimer and the limitation of liability. *
17 // * 17 // * *
18 // * This code implementation is the result 18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboratio 19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distri 20 // * By using, copying, modifying or distributing the software (or *
21 // * any work based on the software) you ag 21 // * any work based on the software) you agree to acknowledge its *
22 // * use in resulting scientific publicati 22 // * use in resulting scientific publications, and indicate your *
23 // * acceptance of all terms of the Geant4 Sof 23 // * acceptance of all terms of the Geant4 Software license. *
24 // ******************************************* 24 // ********************************************************************
25 // 25 //
26 // 26 //
>> 27 // $Id: XrayFluoDAtaSet.cc
>> 28 // GEANT4 tag $Name: xray_fluo-V03-02-00
27 // 29 //
28 // Author: Elena Guardincerri (Elena.Guardince 30 // Author: Elena Guardincerri (Elena.Guardincerri@ge.infn.it)
29 // 31 //
30 // History: 32 // History:
31 // ----------- 33 // -----------
32 // 28 Nov 2001 Elena Guardincerri Created 34 // 28 Nov 2001 Elena Guardincerri Created
33 // 35 //
34 // ------------------------------------------- 36 // -------------------------------------------------------------------
35 37
36 #include "XrayFluoDataSet.hh" 38 #include "XrayFluoDataSet.hh"
37 #include <fstream> 39 #include <fstream>
38 #include "G4VDataSetAlgorithm.hh" 40 #include "G4VDataSetAlgorithm.hh"
39 41
40 XrayFluoDataSet::XrayFluoDataSet(G4int /*Z*/, 42 XrayFluoDataSet::XrayFluoDataSet(G4int /*Z*/,
41 G4DataVector* points, 43 G4DataVector* points,
42 G4DataVector* values, 44 G4DataVector* values,
43 const G4VDataSetAlgorithm* interpolatio 45 const G4VDataSetAlgorithm* interpolation,
44 G4double unitE, G4double unitData) 46 G4double unitE, G4double unitData)
45 :energies(points), data(values), algorithm(i 47 :energies(points), data(values), algorithm(interpolation)
46 { 48 {
47 numberOfBins = energies->size(); 49 numberOfBins = energies->size();
48 unit1 = unitE; 50 unit1 = unitE;
49 unit2 = unitData; 51 unit2 = unitData;
50 } <<
51 52
52 //....oooOO0OOooo........oooOO0OOooo........oo << 53 G4cout << "XrayFluo FluoDataSet created" << G4endl;
>> 54 }
53 55
54 XrayFluoDataSet:: XrayFluoDataSet(G4int /*Z*/, 56 XrayFluoDataSet:: XrayFluoDataSet(G4int /*Z*/,
55 const G4String& dataFile, 57 const G4String& dataFile,
56 const G4VDataSetAlgorithm* interpolati 58 const G4VDataSetAlgorithm* interpolation,
57 G4double unitE, G4double unitData) 59 G4double unitE, G4double unitData)
58 : algorithm(interpolation) 60 : algorithm(interpolation)
59 { 61 {
60 energies = new G4DataVector; 62 energies = new G4DataVector;
61 data = new G4DataVector; 63 data = new G4DataVector;
62 unit1 = unitE; 64 unit1 = unitE;
63 unit2 = unitData; 65 unit2 = unitData;
64 LoadData(dataFile); 66 LoadData(dataFile);
65 numberOfBins = energies->size(); 67 numberOfBins = energies->size();
>> 68
>> 69 G4cout << "XrayFluo FluoDataSet created" << G4endl;
>> 70
66 } 71 }
67 72
68 //....oooOO0OOooo........oooOO0OOooo........oo <<
69 73
70 // Destructor 74 // Destructor
>> 75
71 XrayFluoDataSet::~XrayFluoDataSet() 76 XrayFluoDataSet::~XrayFluoDataSet()
72 { 77 {
73 delete energies; 78 delete energies;
74 delete data; 79 delete data;
>> 80 G4cout << "XrayFluo FluoDataSet deleted" << G4endl;
75 } 81 }
76 82
77 //....oooOO0OOooo........oooOO0OOooo........oo <<
78 83
79 G4double XrayFluoDataSet::FindValue(G4double e 84 G4double XrayFluoDataSet::FindValue(G4double e, G4int) const
80 { 85 {
81 G4double value; 86 G4double value;
82 G4double e0 = (*energies)[0]; 87 G4double e0 = (*energies)[0];
83 // Protections 88 // Protections
84 size_t bin = FindBinLocation(e); 89 size_t bin = FindBinLocation(e);
85 if (bin == numberOfBins) 90 if (bin == numberOfBins)
86 { 91 {
87 92
88 value = (*data)[bin]; 93 value = (*data)[bin];
89 } 94 }
90 else if (e <= e0) 95 else if (e <= e0)
91 { 96 {
92 97
93 value = (*data)[0]; 98 value = (*data)[0];
94 } 99 }
95 else 100 else
96 { 101 {
97 value = algorithm->Calculate(e,bin,*ener 102 value = algorithm->Calculate(e,bin,*energies,*data);
98 } 103 }
99 104
100 return value; 105 return value;
101 } 106 }
102 107
103 //....oooOO0OOooo........oooOO0OOooo........oo <<
104 <<
105 G4int XrayFluoDataSet::FindBinLocation(G4doubl 108 G4int XrayFluoDataSet::FindBinLocation(G4double energy) const
106 { 109 {
107 // Protection against call outside allowed r 110 // Protection against call outside allowed range
108 G4double e0 = (*energies)[0]; 111 G4double e0 = (*energies)[0];
109 if (energy < e0) 112 if (energy < e0)
110 { 113 {
111 114
112 energy = e0; 115 energy = e0;
113 } 116 }
114 117
115 size_t lowerBound = 0; 118 size_t lowerBound = 0;
116 size_t upperBound = numberOfBins - 1; 119 size_t upperBound = numberOfBins - 1;
117 120
118 // Binary search 121 // Binary search
119 while (lowerBound <= upperBound) 122 while (lowerBound <= upperBound)
120 { 123 {
121 size_t midBin = (lowerBound + upperBound 124 size_t midBin = (lowerBound + upperBound)/2;
122 if ( energy < (*energies)[midBin] ) uppe 125 if ( energy < (*energies)[midBin] ) upperBound = midBin-1;
123 else lowerBound = midBin+1; 126 else lowerBound = midBin+1;
124 } 127 }
125 128
126 return upperBound; 129 return upperBound;
127 } 130 }
128 131
129 //....oooOO0OOooo........oooOO0OOooo........oo <<
130 132
131 G4bool XrayFluoDataSet::LoadData(const G4Strin 133 G4bool XrayFluoDataSet::LoadData(const G4String& fileName)
132 { 134 {
133 // Build the complete string identifying the 135 // Build the complete string identifying the file with the data set
134 G4String dirFile = ""; <<
135 136
>> 137
>> 138 G4String dirFile = "";
>> 139
136 char* path; 140 char* path;
137 141
138 path = std::getenv("XRAYDATA"); << 142 #ifndef XRAYDATA
139 if (!path) << 143 #define XRAYDATA PWD
140 path = std::getenv("PWD"); << 144 #endif
>> 145
>> 146 path = getenv("XRAYDATA");
141 147
142 //G4cout << path << G4endl; << 148 G4cout << path << G4endl;
143 //G4cout << fileName << G4endl; << 149 G4cout << fileName << G4endl;
144 150
145 151
146 G4String pathString(path); << 152 G4String pathString(path);
147 pathString += "\0"; << 153 dirFile = pathString + "/" + fileName + ".dat";
148 dirFile = pathString + "/" + fileName + ".da << 154
149 <<
150 std::ifstream file(dirFile); 155 std::ifstream file(dirFile);
151 std::filebuf* lsdp = file.rdbuf(); 156 std::filebuf* lsdp = file.rdbuf();
152 157
153 if (! (lsdp->is_open()) ) 158 if (! (lsdp->is_open()) )
154 { 159 {
155 G4ExceptionDescription execp; 160 G4ExceptionDescription execp;
156 execp << "XrayFluoDataSet - data file: " + 161 execp << "XrayFluoDataSet - data file: " + dirFile + " not found"<<G4endl;
157 G4Exception("XrayFluoDataSet::LoadData()", 162 G4Exception("XrayFluoDataSet::LoadData()","example-xray_fluorescence01",
158 FatalException, execp); 163 FatalException, execp);
159 } 164 }
160 G4double a = 0; 165 G4double a = 0;
161 G4int k = 1; 166 G4int k = 1;
162 167
163 do 168 do
164 { 169 {
165 file >> a; 170 file >> a;
166 G4int nColumns = 2; 171 G4int nColumns = 2;
167 // The file is organized into two column 172 // The file is organized into two columns:
168 // 1st column is the energy 173 // 1st column is the energy
169 // 2nd column is the corresponding value 174 // 2nd column is the corresponding value
170 // The file terminates with the pattern: 175 // The file terminates with the pattern: -1 -1
171 // 176 // -2 -2
172 if (a == -1 || a == -2) 177 if (a == -1 || a == -2)
173 { 178 {
174 179
175 } 180 }
176 else 181 else
177 { 182 {
178 if (k%nColumns != 0) 183 if (k%nColumns != 0)
179 { 184 {
180 G4double e = a * unit1; 185 G4double e = a * unit1;
181 energies->push_back(e); 186 energies->push_back(e);
182 187
183 k++; 188 k++;
184 189
185 } 190 }
186 else if (k%nColumns == 0) 191 else if (k%nColumns == 0)
187 { 192 {
188 G4double value = a * unit2; 193 G4double value = a * unit2;
189 data->push_back(value); 194 data->push_back(value);
190 195
191 k = 1; 196 k = 1;
192 } 197 }
193 } 198 }
194 199
195 } while (a != -2); // end of file 200 } while (a != -2); // end of file
196 201
197 file.close(); 202 file.close();
198 return true; 203 return true;
199 204
200 } 205 }
201 <<
202 //....oooOO0OOooo........oooOO0OOooo........oo <<
203 <<
204 void XrayFluoDataSet::PrintData() const 206 void XrayFluoDataSet::PrintData() const
205 { 207 {
206 size_t size = numberOfBins; 208 size_t size = numberOfBins;
207 for (size_t i=0; i<size; i++) 209 for (size_t i=0; i<size; i++)
208 { 210 {
209 G4double e = (*energies)[i] / unit1; 211 G4double e = (*energies)[i] / unit1;
210 G4double sigma = (*data)[i] / unit2 ; 212 G4double sigma = (*data)[i] / unit2 ;
211 G4cout << "Point: " 213 G4cout << "Point: "
212 << e 214 << e
213 << " - Data value : " 215 << " - Data value : "
214 << sigma 216 << sigma
215 << G4endl; 217 << G4endl;
216 } 218 }
217 } 219 }
218 220
219 221
220 222
221 223