Geant4 Cross Reference |
1 // 1 // 2 // ******************************************* 2 // ******************************************************************** 3 // * License and Disclaimer 3 // * License and Disclaimer * 4 // * 4 // * * 5 // * The Geant4 software is copyright of th 5 // * The Geant4 software is copyright of the Copyright Holders of * 6 // * the Geant4 Collaboration. It is provided 6 // * the Geant4 Collaboration. It is provided under the terms and * 7 // * conditions of the Geant4 Software License 7 // * conditions of the Geant4 Software License, included in the file * 8 // * LICENSE and available at http://cern.ch/ 8 // * LICENSE and available at http://cern.ch/geant4/license . These * 9 // * include a list of copyright holders. 9 // * include a list of copyright holders. * 10 // * 10 // * * 11 // * Neither the authors of this software syst 11 // * Neither the authors of this software system, nor their employing * 12 // * institutes,nor the agencies providing fin 12 // * institutes,nor the agencies providing financial support for this * 13 // * work make any representation or warran 13 // * work make any representation or warranty, express or implied, * 14 // * regarding this software system or assum 14 // * regarding this software system or assume any liability for its * 15 // * use. Please see the license in the file 15 // * use. Please see the license in the file LICENSE and URL above * 16 // * for the full disclaimer and the limitatio 16 // * for the full disclaimer and the limitation of liability. * 17 // * 17 // * * 18 // * This code implementation is the result 18 // * This code implementation is the result of the scientific and * 19 // * technical work of the GEANT4 collaboratio 19 // * technical work of the GEANT4 collaboration. * 20 // * By using, copying, modifying or distri 20 // * By using, copying, modifying or distributing the software (or * 21 // * any work based on the software) you ag 21 // * any work based on the software) you agree to acknowledge its * 22 // * use in resulting scientific publicati 22 // * use in resulting scientific publications, and indicate your * 23 // * acceptance of all terms of the Geant4 Sof 23 // * acceptance of all terms of the Geant4 Software license. * 24 // ******************************************* 24 // ******************************************************************** 25 // 25 // 26 // This example is provided by the Geant4-DNA 26 // This example is provided by the Geant4-DNA collaboration 27 // Any report or published results obtained us 27 // Any report or published results obtained using the Geant4-DNA software 28 // shall cite the following Geant4-DNA collabo 28 // shall cite the following Geant4-DNA collaboration publication: 29 // Med. Phys. 37 (2010) 4692-4708 29 // Med. Phys. 37 (2010) 4692-4708 30 // The Geant4-DNA web site is available at htt 30 // The Geant4-DNA web site is available at http://geant4-dna.org 31 // 31 // 32 // If you use this example, please cite the fo 32 // If you use this example, please cite the following publication: 33 // Rad. Prot. Dos. 133 (2009) 2-11 33 // Rad. Prot. Dos. 133 (2009) 2-11 34 // << 35 #include "RunAction.hh" << 36 34 37 #include "G4UImanager.hh" 35 #include "G4UImanager.hh" 38 #include "G4AnalysisManager.hh" << 39 #include "Randomize.hh" 36 #include "Randomize.hh" 40 37 41 RunAction::RunAction(const DetectorConstructio << 38 #include "RunAction.hh" >> 39 #include "Analysis.hh" >> 40 >> 41 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.... >> 42 >> 43 RunAction::RunAction(DetectorConstruction* det) 42 :fDetector(det) 44 :fDetector(det) 43 { 45 { 44 fSaveRndm = 0; 46 fSaveRndm = 0; 45 fDose3DDose = nullptr; << 46 fMapVoxels = nullptr; << 47 } 47 } 48 48 >> 49 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.... >> 50 49 RunAction::~RunAction() 51 RunAction::~RunAction() 50 { 52 { 51 if (fDose3DDose) delete[] fDose3DDose; << 53 delete[] fDose3DDose; 52 if (fMapVoxels) delete[] fMapVoxels; << 54 delete[] fMapVoxels; 53 } 55 } 54 56 >> 57 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.... >> 58 55 void RunAction::BeginOfRunAction(const G4Run*) 59 void RunAction::BeginOfRunAction(const G4Run*) 56 { 60 { 57 // Read phantom - Singleton 61 // Read phantom - Singleton 58 CellParameterisation* fMyCellParameterisatio << 62 fMyCellParameterisation = CellParameterisation::Instance(); 59 63 60 // Histograms 64 // Histograms 61 // Get/create analysis manager 65 // Get/create analysis manager 62 G4cout << "##### Create analysis manager " < 66 G4cout << "##### Create analysis manager " << " " << this << G4endl; 63 67 64 G4AnalysisManager* man = G4AnalysisManager:: 68 G4AnalysisManager* man = G4AnalysisManager::Instance(); 65 man->SetDefaultFileType("root"); << 66 69 67 G4cout << "Using " << man->GetType() << " an 70 G4cout << "Using " << man->GetType() << " analysis manager" << G4endl; 68 71 69 // Open an output file 72 // Open an output file 70 man->OpenFile("microbeam"); 73 man->OpenFile("microbeam"); 71 man->SetFirstNtupleId(1); 74 man->SetFirstNtupleId(1); 72 75 73 //Declare ntuples 76 //Declare ntuples 74 // 77 // 75 // Create 1st ntuple (id = 1) 78 // Create 1st ntuple (id = 1) 76 // 79 // 77 man->CreateNtuple("ntuple0", "Stopping power 80 man->CreateNtuple("ntuple0", "Stopping power"); 78 man->CreateNtupleDColumn("e"); 81 man->CreateNtupleDColumn("e"); 79 man->CreateNtupleDColumn("sp"); 82 man->CreateNtupleDColumn("sp"); 80 man->FinishNtuple(); 83 man->FinishNtuple(); 81 //G4cout << "Ntuple-1 created" << G4endl; 84 //G4cout << "Ntuple-1 created" << G4endl; 82 85 83 // 86 // 84 // Create 2nd ntuple (id = 2) 87 // Create 2nd ntuple (id = 2) 85 // 88 // 86 man->CreateNtuple("ntuple1", "Beam position" 89 man->CreateNtuple("ntuple1", "Beam position"); 87 man->CreateNtupleDColumn("x"); 90 man->CreateNtupleDColumn("x"); 88 man->CreateNtupleDColumn("y"); 91 man->CreateNtupleDColumn("y"); 89 man->FinishNtuple(); 92 man->FinishNtuple(); 90 //G4cout << "Ntuple-2 created" << G4endl; 93 //G4cout << "Ntuple-2 created" << G4endl; 91 94 92 // 95 // 93 // Create 3rd ntuple (id = 3) 96 // Create 3rd ntuple (id = 3) 94 // 97 // 95 man->CreateNtuple("ntuple2", "Range"); 98 man->CreateNtuple("ntuple2", "Range"); 96 man->CreateNtupleDColumn("x"); 99 man->CreateNtupleDColumn("x"); 97 man->CreateNtupleDColumn("y"); 100 man->CreateNtupleDColumn("y"); 98 man->CreateNtupleDColumn("z"); 101 man->CreateNtupleDColumn("z"); 99 man->FinishNtuple(); 102 man->FinishNtuple(); 100 //G4cout << "Ntuple-3 created" << G4endl; 103 //G4cout << "Ntuple-3 created" << G4endl; 101 104 102 // 105 // 103 // Create 4th ntuple (id = 4) 106 // Create 4th ntuple (id = 4) 104 // 107 // 105 man->CreateNtuple("ntuple3", "Doses"); 108 man->CreateNtuple("ntuple3", "Doses"); 106 man->CreateNtupleDColumn("doseN"); 109 man->CreateNtupleDColumn("doseN"); 107 man->CreateNtupleDColumn("doseC"); 110 man->CreateNtupleDColumn("doseC"); 108 man->FinishNtuple(); 111 man->FinishNtuple(); 109 //G4cout << "Ntuple-4 created" << G4endl; 112 //G4cout << "Ntuple-4 created" << G4endl; 110 113 111 // 114 // 112 // Create 5th ntuple (id = 5) 115 // Create 5th ntuple (id = 5) 113 // 116 // 114 man->CreateNtuple("ntuple4", "3D"); 117 man->CreateNtuple("ntuple4", "3D"); 115 man->CreateNtupleDColumn("x"); 118 man->CreateNtupleDColumn("x"); 116 man->CreateNtupleDColumn("y"); 119 man->CreateNtupleDColumn("y"); 117 man->CreateNtupleDColumn("z"); 120 man->CreateNtupleDColumn("z"); 118 man->CreateNtupleDColumn("doseV"); 121 man->CreateNtupleDColumn("doseV"); 119 man->FinishNtuple(); 122 man->FinishNtuple(); 120 //G4cout << "Ntuple-3 created" << G4endl; 123 //G4cout << "Ntuple-3 created" << G4endl; 121 124 122 G4cout << "All Ntuples have been created " < 125 G4cout << "All Ntuples have been created " << G4endl; 123 126 124 // save Rndm status 127 // save Rndm status 125 if (fSaveRndm > 0) 128 if (fSaveRndm > 0) 126 { << 129 { 127 CLHEP::HepRandom::showEngineStatus(); << 130 CLHEP::HepRandom::showEngineStatus(); 128 CLHEP::HepRandom::saveEngineStatus("beginO << 131 CLHEP::HepRandom::saveEngineStatus("beginOfRun.rndm"); 129 } << 132 } 130 133 131 fNumEvent = 0; 134 fNumEvent = 0; 132 fNbOfHitsGas = 0; 135 fNbOfHitsGas = 0; 133 136 134 // ABSORBED DOSES INITIALIZATION 137 // ABSORBED DOSES INITIALIZATION 135 fDoseN = 0; 138 fDoseN = 0; 136 fDoseC = 0; 139 fDoseC = 0; 137 140 138 fMassCytoplasm = fDetector->GetMassCytoplasm 141 fMassCytoplasm = fDetector->GetMassCytoplasm(); 139 fMassNucleus = fDetector->GetMassNucleus() 142 fMassNucleus = fDetector->GetMassNucleus(); 140 fNbOfPixels = fDetector->GetNbOfPixelsInPhan 143 fNbOfPixels = fDetector->GetNbOfPixelsInPhantom(); 141 144 142 fMapVoxels = new G4ThreeVector[fNbOfPixels]; 145 fMapVoxels = new G4ThreeVector[fNbOfPixels]; 143 fDose3DDose = new G4double[fNbOfPixels]; 146 fDose3DDose = new G4double[fNbOfPixels]; 144 147 145 for (G4int i=0; i<fNbOfPixels; i++) 148 for (G4int i=0; i<fNbOfPixels; i++) 146 { 149 { 147 fMapVoxels [i]=fMyCellParameterisation->Ge << 150 fMapVoxels [i]=fMyCellParameterisation->GetVoxelThreeVector(i); 148 fDose3DDose[i]=0; << 151 fDose3DDose[i]=0; 149 } 152 } >> 153 150 } 154 } 151 155 >> 156 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.... >> 157 152 void RunAction::EndOfRunAction(const G4Run* /* 158 void RunAction::EndOfRunAction(const G4Run* /*aRun*/) 153 { 159 { 154 G4AnalysisManager* man = G4AnalysisManager:: 160 G4AnalysisManager* man = G4AnalysisManager::Instance(); 155 161 156 // save Rndm status 162 // save Rndm status 157 if (fSaveRndm == 1) 163 if (fSaveRndm == 1) 158 { 164 { 159 CLHEP::HepRandom::showEngineStatus(); 165 CLHEP::HepRandom::showEngineStatus(); 160 CLHEP::HepRandom::saveEngineStatus("endOfR 166 CLHEP::HepRandom::saveEngineStatus("endOfRun.rndm"); 161 } 167 } 162 168 163 for (G4int i=0; i<fNbOfPixels; i++) 169 for (G4int i=0; i<fNbOfPixels; i++) 164 { 170 { 165 if (fDose3DDose[i]>0) << 171 G4ThreeVector v; 166 { << 172 v = fMapVoxels[i]; 167 G4ThreeVector v; << 173 if ( (GetNumEvent()+1) !=0) 168 v = fMapVoxels[i]; << 174 { 169 man->FillNtupleDColumn(5,0,v.x()); << 175 //Fill ntuple #5 170 man->FillNtupleDColumn(5,1,v.y()); << 176 man->FillNtupleDColumn(5,0,v.x()); 171 man->FillNtupleDColumn(5,2,v.z()); << 177 man->FillNtupleDColumn(5,1,v.y()); 172 man->FillNtupleDColumn(5,3,fDose3DDose[i << 178 man->FillNtupleDColumn(5,2,v.z()); 173 man->AddNtupleRow(5); << 179 man->FillNtupleDColumn(5,3,fDose3DDose[i]/(GetNumEvent()+1)); 174 } << 180 man->AddNtupleRow(5); >> 181 } 175 } 182 } 176 183 177 G4cout << "-> Total number of particles dete 184 G4cout << "-> Total number of particles detected by the gas detector : " << GetNbOfHitsGas() << G4endl; 178 G4cout << G4endl; 185 G4cout << G4endl; 179 186 180 //save histograms 187 //save histograms 181 man->Write(); 188 man->Write(); 182 man->CloseFile(); 189 man->CloseFile(); 183 << 190 184 // Complete clean-up 191 // Complete clean-up 185 man->Clear(); << 192 delete G4AnalysisManager::Instance(); >> 193 186 } 194 } 187 195