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Phys. 37 (2010) 4692-4708 29 // Med. Phys. 37 (2010) 4692-4708 30 // The Geant4-DNA web site is available at htt 30 // The Geant4-DNA web site is available at http://geant4-dna.org 31 // 31 // 32 // If you use this example, please cite the fo 32 // If you use this example, please cite the following publication: 33 // Rad. Prot. Dos. 133 (2009) 2-11 33 // Rad. Prot. Dos. 133 (2009) 2-11 34 34 35 #ifndef CellParameterisation_H 35 #ifndef CellParameterisation_H 36 #define CellParameterisation_H 1 36 #define CellParameterisation_H 1 37 37 38 #include "G4VPVParameterisation.hh" 38 #include "G4VPVParameterisation.hh" 39 #include "G4VisAttributes.hh" 39 #include "G4VisAttributes.hh" 40 40 41 //....oooOO0OOooo........oooOO0OOooo........oo 41 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 42 42 43 class CellParameterisation : public G4VPVParam 43 class CellParameterisation : public G4VPVParameterisation 44 { 44 { 45 public: 45 public: 46 46 47 explicit CellParameterisation << 47 CellParameterisation 48 (G4Material* nucleus1, G4Material* cytopla 48 (G4Material* nucleus1, G4Material* cytoplasm1, 49 G4Material* nucleus2, G4Material* cytopla 49 G4Material* nucleus2, G4Material* cytoplasm2, 50 G4Material* nucleus3, G4Material* cytopla 50 G4Material* nucleus3, G4Material* cytoplasm3 51 ); 51 ); 52 52 53 ~CellParameterisation() override; << 53 virtual ~CellParameterisation(); 54 54 55 void ComputeTransformation (const G4int co << 55 void ComputeTransformation (const G4int copyNo,G4VPhysicalVolume* physVol) const; 56 56 57 void ComputeDimensions(G4Box&, 57 void ComputeDimensions(G4Box&, 58 const G4int, 58 const G4int, 59 const G4VPhysicalVolume* ) const ove << 59 const G4VPhysicalVolume* ) const; 60 60 61 void ComputeDimensions(G4Tubs &, 61 void ComputeDimensions(G4Tubs &, 62 const G4int 62 const G4int, 63 const G4VPh << 63 const G4VPhysicalVolume *) const {} 64 64 65 void ComputeDimensions(G4Trd &, 65 void ComputeDimensions(G4Trd &, 66 const G4int 66 const G4int, 67 const G4VPh << 67 const G4VPhysicalVolume *) const {} 68 68 69 void ComputeDimensions(G4Trap &, 69 void ComputeDimensions(G4Trap &, 70 const G4int 70 const G4int, 71 const G4VPh << 71 const G4VPhysicalVolume *) const {} 72 72 73 void ComputeDimensions(G4Cons &, 73 void ComputeDimensions(G4Cons &, 74 const G4int 74 const G4int, 75 const G4VPh << 75 const G4VPhysicalVolume *) const {} 76 76 77 void ComputeDimensions(G4Sphere &, 77 void ComputeDimensions(G4Sphere &, 78 const G4int 78 const G4int, 79 const G4VPh << 79 const G4VPhysicalVolume *) const {} 80 80 81 void ComputeDimensions(G4Ellipsoid &, 81 void ComputeDimensions(G4Ellipsoid &, 82 const G4int 82 const G4int, 83 const G4VPh << 83 const G4VPhysicalVolume *) const {} 84 84 85 void ComputeDimensions(G4Orb &, 85 void ComputeDimensions(G4Orb &, 86 const G4int 86 const G4int, 87 const G4VPh << 87 const G4VPhysicalVolume *) const {} 88 88 89 void ComputeDimensions(G4Torus &, 89 void ComputeDimensions(G4Torus &, 90 const G4int 90 const G4int, 91 const G4VPh << 91 const G4VPhysicalVolume *) const {} 92 92 93 void ComputeDimensions(G4Para &, 93 void ComputeDimensions(G4Para &, 94 const G4int 94 const G4int, 95 const G4VPh << 95 const G4VPhysicalVolume *) const {} 96 96 97 void ComputeDimensions(G4Polycone &, 97 void ComputeDimensions(G4Polycone &, 98 const G4int 98 const G4int, 99 const G4VPh << 99 const G4VPhysicalVolume *) const {} 100 100 101 void ComputeDimensions(G4Polyhedra &, 101 void ComputeDimensions(G4Polyhedra &, 102 const G4int 102 const G4int, 103 const G4VPh << 103 const G4VPhysicalVolume *) const {} 104 104 105 void ComputeDimensions(G4Hype &, 105 void ComputeDimensions(G4Hype &, 106 const G4int 106 const G4int, 107 const G4VPh << 107 const G4VPhysicalVolume *) const {} 108 108 109 G4int GetNoBoxes() const {return fPhantomT << 109 G4int GetNoBoxes() {return fPhantomTotalPixels;} 110 110 111 G4Material* ComputeMaterial(const G4int co 111 G4Material* ComputeMaterial(const G4int copyNo, 112 G4VPhysi 112 G4VPhysicalVolume* physVol, 113 const G4VTouch << 113 const G4VTouchable*); 114 114 115 // NEW 115 // NEW 116 116 117 G4int GetPhantomTotalPixels() const {r << 117 G4int GetPhantomTotalPixels() {return fPhantomTotalPixels;} 118 G4int GetNucleusTotalPixels() const {r << 118 G4int GetNucleusTotalPixels() {return fNucleusTotalPixels;} 119 G4int GetCytoplasmTotalPixels() const {r << 119 G4int GetCytoplasmTotalPixels() {return fCytoplasmTotalPixels;} 120 G4double GetPixelSizeX() const {r << 120 G4double GetPixelSizeX() {return fDimCellBoxX;} 121 G4double GetPixelSizeY() const {r << 121 G4double GetPixelSizeY() {return fDimCellBoxY;} 122 G4double GetPixelSizeZ() const {r << 122 G4double GetPixelSizeZ() {return fDimCellBoxZ;} 123 G4double GetCytoplasmMass() const {r << 123 G4double GetCytoplasmMass() {return fCytoplasmMass;} 124 G4double GetNucleusMass() const {r << 124 G4double GetNucleusMass() {return fNucleusMass;} 125 << 125 126 G4ThreeVector GetVoxelThreeVector(G4int i) << 126 G4ThreeVector GetVoxelThreeVector(G4int i) {return fMapCell[i];} 127 G4double GetMaterialVector(G4int i) << 127 G4double GetMaterialVector(G4int i) {return fMaterial[i];} 128 G4double GetMassVector(G4int i) << 128 G4double GetMassVector(G4int i) {return fMass[i];} 129 G4int GetTissueType(G4int i) << 129 G4int GetTissueType(G4int i) {return fTissueType[i];} 130 130 131 // SINGLETON << 131 //SINGLETON 132 132 133 static CellParameterisation * Instance() 133 static CellParameterisation * Instance() 134 { 134 { 135 return gInstance; 135 return gInstance; 136 } 136 } >> 137 // 137 138 138 private: 139 private: 139 static CellParameterisation* gInstance; << 140 140 << 141 G4Material * fNucleusMaterial1; 141 G4Material * fNucleusMaterial1; 142 G4Material * fCytoplasmMaterial1; 142 G4Material * fCytoplasmMaterial1; 143 G4Material * fNucleusMaterial2; 143 G4Material * fNucleusMaterial2; 144 G4Material * fCytoplasmMaterial2; 144 G4Material * fCytoplasmMaterial2; 145 G4Material * fNucleusMaterial3; 145 G4Material * fNucleusMaterial3; 146 G4Material * fCytoplasmMaterial3; 146 G4Material * fCytoplasmMaterial3; 147 147 148 G4VisAttributes * fNucleusAttributes1; 148 G4VisAttributes * fNucleusAttributes1; 149 G4VisAttributes * fCytoplasmAttributes1; 149 G4VisAttributes * fCytoplasmAttributes1; 150 G4VisAttributes * fNucleusAttributes2; 150 G4VisAttributes * fNucleusAttributes2; 151 G4VisAttributes * fCytoplasmAttributes2; 151 G4VisAttributes * fCytoplasmAttributes2; 152 G4VisAttributes * fNucleusAttributes3; 152 G4VisAttributes * fNucleusAttributes3; 153 G4VisAttributes * fCytoplasmAttributes3; 153 G4VisAttributes * fCytoplasmAttributes3; 154 154 155 G4ThreeVector * fMapCell; // VOXEL COOR << 155 G4ThreeVector * fMapCell ; // VOXEL COORDINATES >> 156 G4double * fMaterial ; // MATERIAL >> 157 G4double * fMass ; // DENSITY REGION >> 158 G4int * fTissueType ; // DENSITY REGION >> 159 >> 160 G4int fPhantomTotalPixels; >> 161 G4int fNucleusTotalPixels; >> 162 G4int fCytoplasmTotalPixels; 156 163 157 G4double * fMaterial; // MATERIAL << 158 G4double * fMass; // DENSITY RE << 159 G4double fDimCellBoxX; 164 G4double fDimCellBoxX; 160 G4double fDimCellBoxY; 165 G4double fDimCellBoxY; 161 G4double fDimCellBoxZ; 166 G4double fDimCellBoxZ; 162 G4double fNucleusMass; 167 G4double fNucleusMass; 163 G4double fCytoplasmMass; 168 G4double fCytoplasmMass; 164 169 165 G4int * fTissueType; // DENSITY RE << 170 static CellParameterisation* gInstance; 166 G4int fPhantomTotalPixels; << 171 167 G4int fNucleusTotalPixels; << 168 G4int fCytoplasmTotalPixels; << 169 }; 172 }; >> 173 170 #endif 174 #endif 171 175 172 176 173 177