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25 // 25 //
26 // This example is provided by the Geant4-DNA 26 // This example is provided by the Geant4-DNA collaboration
27 // Any report or published results obtained us 27 // Any report or published results obtained using the Geant4-DNA software
28 // shall cite the following Geant4-DNA collabo 28 // shall cite the following Geant4-DNA collaboration publication:
29 // Med. Phys. 37 (2010) 4692-4708 29 // Med. Phys. 37 (2010) 4692-4708
30 // The Geant4-DNA web site is available at htt 30 // The Geant4-DNA web site is available at http://geant4-dna.org
31 // 31 //
32 // If you use this example, please cite the fo 32 // If you use this example, please cite the following publication:
33 // Rad. Prot. Dos. 133 (2009) 2-11 33 // Rad. Prot. Dos. 133 (2009) 2-11
34 34
35 #ifndef CellParameterisation_H 35 #ifndef CellParameterisation_H
36 #define CellParameterisation_H 1 36 #define CellParameterisation_H 1
37 37
38 #include "G4VPVParameterisation.hh" 38 #include "G4VPVParameterisation.hh"
39 #include "G4VisAttributes.hh" 39 #include "G4VisAttributes.hh"
40 40
41 //....oooOO0OOooo........oooOO0OOooo........oo 41 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
42 42
43 class CellParameterisation : public G4VPVParam 43 class CellParameterisation : public G4VPVParameterisation
44 { 44 {
45 public: 45 public:
46 46
47 explicit CellParameterisation << 47 CellParameterisation
48 (G4Material* nucleus1, G4Material* cytopla << 48 (G4int NoBoxes, G4float DimBoxX, G4float DimBoxY, G4float DimBoxZ,
>> 49 G4Material* nucleus1, G4Material* cytoplasm1,
49 G4Material* nucleus2, G4Material* cytopla 50 G4Material* nucleus2, G4Material* cytoplasm2,
50 G4Material* nucleus3, G4Material* cytopla 51 G4Material* nucleus3, G4Material* cytoplasm3
51 ); 52 );
52 53
53 ~CellParameterisation() override; << 54 virtual ~CellParameterisation();
54 55
55 void ComputeTransformation (const G4int co << 56 void ComputeTransformation (const G4int copyNo,G4VPhysicalVolume* physVol) const;
56 57
57 void ComputeDimensions(G4Box&, 58 void ComputeDimensions(G4Box&,
58 const G4int, 59 const G4int,
59 const G4VPhysicalVolume* ) const ove << 60 const G4VPhysicalVolume* ) const;
60 61
61 void ComputeDimensions(G4Tubs &, 62 void ComputeDimensions(G4Tubs &,
62 const G4int 63 const G4int,
63 const G4VPh << 64 const G4VPhysicalVolume *) const {}
64 65
65 void ComputeDimensions(G4Trd &, 66 void ComputeDimensions(G4Trd &,
66 const G4int 67 const G4int,
67 const G4VPh << 68 const G4VPhysicalVolume *) const {}
68 69
69 void ComputeDimensions(G4Trap &, 70 void ComputeDimensions(G4Trap &,
70 const G4int 71 const G4int,
71 const G4VPh << 72 const G4VPhysicalVolume *) const {}
72 73
73 void ComputeDimensions(G4Cons &, 74 void ComputeDimensions(G4Cons &,
74 const G4int 75 const G4int,
75 const G4VPh << 76 const G4VPhysicalVolume *) const {}
76 77
77 void ComputeDimensions(G4Sphere &, 78 void ComputeDimensions(G4Sphere &,
78 const G4int 79 const G4int,
79 const G4VPh << 80 const G4VPhysicalVolume *) const {}
80 81
81 void ComputeDimensions(G4Ellipsoid &, 82 void ComputeDimensions(G4Ellipsoid &,
82 const G4int 83 const G4int,
83 const G4VPh << 84 const G4VPhysicalVolume *) const {}
84 85
85 void ComputeDimensions(G4Orb &, 86 void ComputeDimensions(G4Orb &,
86 const G4int 87 const G4int,
87 const G4VPh << 88 const G4VPhysicalVolume *) const {}
88 89
89 void ComputeDimensions(G4Torus &, 90 void ComputeDimensions(G4Torus &,
90 const G4int 91 const G4int,
91 const G4VPh << 92 const G4VPhysicalVolume *) const {}
92 93
93 void ComputeDimensions(G4Para &, 94 void ComputeDimensions(G4Para &,
94 const G4int 95 const G4int,
95 const G4VPh << 96 const G4VPhysicalVolume *) const {}
96 97
97 void ComputeDimensions(G4Polycone &, 98 void ComputeDimensions(G4Polycone &,
98 const G4int 99 const G4int,
99 const G4VPh << 100 const G4VPhysicalVolume *) const {}
100 101
101 void ComputeDimensions(G4Polyhedra &, 102 void ComputeDimensions(G4Polyhedra &,
102 const G4int 103 const G4int,
103 const G4VPh << 104 const G4VPhysicalVolume *) const {}
104 105
105 void ComputeDimensions(G4Hype &, 106 void ComputeDimensions(G4Hype &,
106 const G4int 107 const G4int,
107 const G4VPh << 108 const G4VPhysicalVolume *) const {}
108 109
109 G4int GetNoBoxes() const {return fPhantomT << 110 G4int GetNoBoxes() {return fNoCellBoxes;}
110 111
111 G4Material* ComputeMaterial(const G4int co 112 G4Material* ComputeMaterial(const G4int copyNo,
112 G4VPhysi 113 G4VPhysicalVolume* physVol,
113 const G4VTouch << 114 const G4VTouchable*);
114 115
115 // NEW <<
116 <<
117 G4int GetPhantomTotalPixels() const {r <<
118 G4int GetNucleusTotalPixels() const {r <<
119 G4int GetCytoplasmTotalPixels() const {r <<
120 G4double GetPixelSizeX() const {r <<
121 G4double GetPixelSizeY() const {r <<
122 G4double GetPixelSizeZ() const {r <<
123 G4double GetCytoplasmMass() const {r <<
124 G4double GetNucleusMass() const {r <<
125 <<
126 G4ThreeVector GetVoxelThreeVector(G4int i) <<
127 G4double GetMaterialVector(G4int i) <<
128 G4double GetMassVector(G4int i) <<
129 G4int GetTissueType(G4int i) <<
130 <<
131 // SINGLETON <<
132 <<
133 static CellParameterisation * Instance() <<
134 { <<
135 return gInstance; <<
136 } <<
137 <<
138 private: 116 private:
139 static CellParameterisation* gInstance; << 117
140 << 118 G4int fNoCellBoxes;
>> 119 G4float fDimCellBoxX;
>> 120 G4float fDimCellBoxY;
>> 121 G4float fDimCellBoxZ;
>> 122
141 G4Material * fNucleusMaterial1; 123 G4Material * fNucleusMaterial1;
142 G4Material * fCytoplasmMaterial1; 124 G4Material * fCytoplasmMaterial1;
143 G4Material * fNucleusMaterial2; 125 G4Material * fNucleusMaterial2;
144 G4Material * fCytoplasmMaterial2; 126 G4Material * fCytoplasmMaterial2;
145 G4Material * fNucleusMaterial3; 127 G4Material * fNucleusMaterial3;
146 G4Material * fCytoplasmMaterial3; 128 G4Material * fCytoplasmMaterial3;
147 129
148 G4VisAttributes * fNucleusAttributes1; 130 G4VisAttributes * fNucleusAttributes1;
149 G4VisAttributes * fCytoplasmAttributes1; 131 G4VisAttributes * fCytoplasmAttributes1;
150 G4VisAttributes * fNucleusAttributes2; 132 G4VisAttributes * fNucleusAttributes2;
151 G4VisAttributes * fCytoplasmAttributes2; 133 G4VisAttributes * fCytoplasmAttributes2;
152 G4VisAttributes * fNucleusAttributes3; 134 G4VisAttributes * fNucleusAttributes3;
153 G4VisAttributes * fCytoplasmAttributes3; 135 G4VisAttributes * fCytoplasmAttributes3;
154 136
155 G4ThreeVector * fMapCell; // VOXEL COOR << 137 G4ThreeVector * fMapCell ; // VOXEL COORDINATES
156 << 138 G4float * fMaterial ; // MATERIAL
157 G4double * fMaterial; // MATERIAL << 139 G4float * fMass ; // DENSITY REGION
158 G4double * fMass; // DENSITY RE << 140
159 G4double fDimCellBoxX; <<
160 G4double fDimCellBoxY; <<
161 G4double fDimCellBoxZ; <<
162 G4double fNucleusMass; <<
163 G4double fCytoplasmMass; <<
164 <<
165 G4int * fTissueType; // DENSITY RE <<
166 G4int fPhantomTotalPixels; <<
167 G4int fNucleusTotalPixels; <<
168 G4int fCytoplasmTotalPixels; <<
169 }; 141 };
>> 142
170 #endif 143 #endif
171 144
172 145
173 146