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25 // 25 //
26 // 26 //
27 // 27 //
28 // Authors: Elena Guardincerri (Elena.Guardinc 28 // Authors: Elena Guardincerri (Elena.Guardincerri@ge.infn.it)
29 // Alfonso Mantero (Alfonso.Mantero@g 29 // Alfonso Mantero (Alfonso.Mantero@ge.infn.it)
30 // 30 //
31 // History: 31 // History:
32 // ----------- 32 // -----------
33 // 16 Sep 2001 E. Guardincerri First Committe 33 // 16 Sep 2001 E. Guardincerri First Committed to cvs
34 // 34 //
35 // ------------------------------------------- 35 // -------------------------------------------------------------------
36 36
37 #include "G4RDAtomicTransitionManager.hh" 37 #include "G4RDAtomicTransitionManager.hh"
38 38
39 G4RDAtomicTransitionManager::G4RDAtomicTransit 39 G4RDAtomicTransitionManager::G4RDAtomicTransitionManager(G4int minZ, G4int maxZ,
40 G4int limitInfTable,G4int limitSupTable) 40 G4int limitInfTable,G4int limitSupTable)
41 :zMin(minZ), 41 :zMin(minZ),
42 zMax(maxZ), 42 zMax(maxZ),
43 infTableLimit(limitInfTable), 43 infTableLimit(limitInfTable),
44 supTableLimit(limitSupTable) 44 supTableLimit(limitSupTable)
45 { 45 {
46 // infTableLimit is initialized to 6 because 46 // infTableLimit is initialized to 6 because EADL lacks data for Z<=5
47 G4RDShellData* shellManager = new G4RDShellD 47 G4RDShellData* shellManager = new G4RDShellData;
48 48
49 // initialization of the data for auger effe 49 // initialization of the data for auger effect
50 50
51 augerData = new G4RDAugerData; 51 augerData = new G4RDAugerData;
52 52
53 shellManager->LoadData("/fluor/binding"); 53 shellManager->LoadData("/fluor/binding");
54 54
55 // Fills shellTable with the data from EADL, 55 // Fills shellTable with the data from EADL, identities and binding
56 // energies of shells 56 // energies of shells
57 for (G4int Z = zMin; Z<= zMax; Z++) 57 for (G4int Z = zMin; Z<= zMax; Z++)
58 { 58 {
59 std::vector<G4RDAtomicShell*> vectorOfSh 59 std::vector<G4RDAtomicShell*> vectorOfShells;
60 size_t shellIndex = 0; 60 size_t shellIndex = 0;
61 61
62 size_t numberOfShells=shellManager->Numb 62 size_t numberOfShells=shellManager->NumberOfShells(Z);
63 for (shellIndex = 0; shellIndex<numberOf 63 for (shellIndex = 0; shellIndex<numberOfShells; shellIndex++)
64 { 64 {
65 G4int shellId = shellManager->ShellId(Z,sh 65 G4int shellId = shellManager->ShellId(Z,shellIndex);
66 G4double bindingEnergy = shellManager->Bin 66 G4double bindingEnergy = shellManager->BindingEnergy(Z,shellIndex);
67 67
68 G4RDAtomicShell * shell = new G4RDAtomicSh 68 G4RDAtomicShell * shell = new G4RDAtomicShell(shellId,bindingEnergy);
69 69
70 vectorOfShells.push_back(shell); 70 vectorOfShells.push_back(shell);
71 } 71 }
72 72
73 // shellTable.insert(std::make_pair( 73 // shellTable.insert(std::make_pair(Z, vectorOfShells));
74 shellTable[Z] = vectorOfShells; 74 shellTable[Z] = vectorOfShells;
75 } 75 }
76 76
77 // Fills transitionTable with the data from 77 // Fills transitionTable with the data from EADL, identities, transition
78 // energies and transition probabilities 78 // energies and transition probabilities
79 for (G4int Znum= infTableLimit; Znum<=supTab 79 for (G4int Znum= infTableLimit; Znum<=supTableLimit; Znum++)
80 { G4RDFluoData* fluoManager = new G4RDFlu 80 { G4RDFluoData* fluoManager = new G4RDFluoData;
81 std::vector<G4RDFluoTransition*> vectorOfT 81 std::vector<G4RDFluoTransition*> vectorOfTransitions;
82 fluoManager->LoadData(Znum); 82 fluoManager->LoadData(Znum);
83 83
84 size_t numberOfVacancies = fluoManager-> N 84 size_t numberOfVacancies = fluoManager-> NumberOfVacancies();
85 85
86 for (size_t vacancyIndex = 0; vacancyIndex 86 for (size_t vacancyIndex = 0; vacancyIndex<numberOfVacancies; vacancyIndex++)
87 87
88 { 88 {
89 std::vector<G4int> vectorOfIds; 89 std::vector<G4int> vectorOfIds;
90 G4DataVector vectorOfEnergies; 90 G4DataVector vectorOfEnergies;
91 G4DataVector vectorOfProbabilities; 91 G4DataVector vectorOfProbabilities;
92 92
93 G4int finalShell = fluoManager->VacancyId(va 93 G4int finalShell = fluoManager->VacancyId(vacancyIndex);
94 size_t numberOfTransitions = fluoManager->Nu 94 size_t numberOfTransitions = fluoManager->NumberOfTransitions(vacancyIndex);
95 for (size_t origShellIndex = 0; origShellInd 95 for (size_t origShellIndex = 0; origShellIndex < numberOfTransitions;
96 origShellIndex++) 96 origShellIndex++)
97 97
98 { 98 {
99 99
100 G4int originatingShellId = fluoManager-> 100 G4int originatingShellId = fluoManager->StartShellId(origShellIndex,vacancyIndex);
101 101
102 vectorOfIds.push_back(originatingShellId 102 vectorOfIds.push_back(originatingShellId);
103 103
104 G4double transitionEnergy = fluoManager- 104 G4double transitionEnergy = fluoManager->StartShellEnergy(origShellIndex,vacancyIndex);
105 vectorOfEnergies.push_back(transitionEne 105 vectorOfEnergies.push_back(transitionEnergy);
106 G4double transitionProbability = fluoMan 106 G4double transitionProbability = fluoManager->StartShellProb(origShellIndex,vacancyIndex);
107 vectorOfProbabilities.push_back(transiti 107 vectorOfProbabilities.push_back(transitionProbability);
108 } 108 }
109 G4RDFluoTransition * transition = new G4RD 109 G4RDFluoTransition * transition = new G4RDFluoTransition (finalShell,vectorOfIds,
110 vectorOfEnergies,vectorOfP 110 vectorOfEnergies,vectorOfProbabilities);
111 vectorOfTransitions.push_back(transition); 111 vectorOfTransitions.push_back(transition);
112 } 112 }
113 // transitionTable.insert(std::make_p 113 // transitionTable.insert(std::make_pair(Znum, vectorOfTransitions));
114 transitionTable[Znum] = vectorOfTransition 114 transitionTable[Znum] = vectorOfTransitions;
115 115
116 delete fluoManager; 116 delete fluoManager;
117 } 117 }
118 delete shellManager; 118 delete shellManager;
119 } 119 }
120 120
121 G4RDAtomicTransitionManager::~G4RDAtomicTransi 121 G4RDAtomicTransitionManager::~G4RDAtomicTransitionManager()
122 122
123 { 123 {
124 124
125 delete augerData; 125 delete augerData;
126 126
127 std::map<G4int,std::vector<G4RDAtomicShell*>,s 127 std::map<G4int,std::vector<G4RDAtomicShell*>,std::less<G4int> >::iterator pos;
128 128
129 for (pos = shellTable.begin(); pos != shellTa 129 for (pos = shellTable.begin(); pos != shellTable.end(); pos++){
130 130
131 std::vector< G4RDAtomicShell*>vec = (*pos). 131 std::vector< G4RDAtomicShell*>vec = (*pos).second;
132 132
133 G4int vecSize=vec.size(); 133 G4int vecSize=vec.size();
134 134
135 for (G4int i=0; i< vecSize; i++){ 135 for (G4int i=0; i< vecSize; i++){
136 G4RDAtomicShell* shell = vec[i]; 136 G4RDAtomicShell* shell = vec[i];
137 delete shell; 137 delete shell;
138 } 138 }
139 139
140 } 140 }
141 141
142 std::map<G4int,std::vector<G4RDFluoTransition 142 std::map<G4int,std::vector<G4RDFluoTransition*>,std::less<G4int> >::iterator ppos;
143 143
144 for (ppos = transitionTable.begin(); ppos != 144 for (ppos = transitionTable.begin(); ppos != transitionTable.end(); ppos++){
145 145
146 std::vector<G4RDFluoTransition*>vec = (*ppo 146 std::vector<G4RDFluoTransition*>vec = (*ppos).second;
147 147
148 G4int vecSize=vec.size(); 148 G4int vecSize=vec.size();
149 149
150 for (G4int i=0; i< vecSize; i++){ 150 for (G4int i=0; i< vecSize; i++){
151 G4RDFluoTransition* transition = vec[i]; 151 G4RDFluoTransition* transition = vec[i];
152 delete transition; 152 delete transition;
153 } 153 }
154 154
155 } 155 }
156 156
157 } 157 }
158 158
159 G4RDAtomicTransitionManager* G4RDAtomicTransit 159 G4RDAtomicTransitionManager* G4RDAtomicTransitionManager::instance = 0;
160 160
161 G4RDAtomicTransitionManager* G4RDAtomicTransit 161 G4RDAtomicTransitionManager* G4RDAtomicTransitionManager::Instance()
162 { 162 {
163 if (instance == 0) 163 if (instance == 0)
164 { 164 {
165 instance = new G4RDAtomicTransitionManag 165 instance = new G4RDAtomicTransitionManager;
166 166
167 } 167 }
168 return instance; 168 return instance;
169 } 169 }
170 170
171 171
172 G4RDAtomicShell* G4RDAtomicTransitionManager:: 172 G4RDAtomicShell* G4RDAtomicTransitionManager::Shell(G4int Z, size_t shellIndex) const
173 { 173 {
174 std::map<G4int,std::vector<G4RDAtomicShell*> 174 std::map<G4int,std::vector<G4RDAtomicShell*>,std::less<G4int> >::const_iterator pos;
175 175
176 pos = shellTable.find(Z); 176 pos = shellTable.find(Z);
177 177
178 if (pos!= shellTable.end()) 178 if (pos!= shellTable.end())
179 { 179 {
180 std::vector<G4RDAtomicShell*> v = (*pos) 180 std::vector<G4RDAtomicShell*> v = (*pos).second;
181 if (shellIndex<v.size()) 181 if (shellIndex<v.size())
182 { 182 {
183 return(v[shellIndex]); 183 return(v[shellIndex]);
184 } 184 }
185 else 185 else
186 { 186 {
187 size_t lastShell = v.size(); 187 size_t lastShell = v.size();
188 G4cout << "G4RDAtomicTransitionManager::Sh 188 G4cout << "G4RDAtomicTransitionManager::Shell - Z = "
189 << Z << ", shellIndex = " << shellIndex 189 << Z << ", shellIndex = " << shellIndex
190 << " not found; number of shells = " << l 190 << " not found; number of shells = " << lastShell << G4endl;
191 // G4Exception("G4RDAtomicTransitionManag 191 // G4Exception("G4RDAtomicTransitionManager:shell not found");
192 if (lastShell > 0) 192 if (lastShell > 0)
193 { 193 {
194 return v[lastShell - 1]; 194 return v[lastShell - 1];
195 } 195 }
196 else 196 else
197 { 197 {
198 return 0; 198 return 0;
199 } 199 }
200 } 200 }
201 } 201 }
202 else 202 else
203 { 203 {
204 G4Exception("G4RDAtomicTransitionManager 204 G4Exception("G4RDAtomicTransitionManager::Shell()",
205 "InvalidSetup", FatalExcepti 205 "InvalidSetup", FatalException, "Z not found!");
206 return 0; 206 return 0;
207 } 207 }
208 } 208 }
209 209
210 // This function gives, upon Z and the Index o 210 // This function gives, upon Z and the Index of the initial shell where te vacancy is,
211 // the radiative transition that can happen (o 211 // the radiative transition that can happen (originating shell, energy, probability)
212 212
213 const G4RDFluoTransition* G4RDAtomicTransition 213 const G4RDFluoTransition* G4RDAtomicTransitionManager::ReachableShell(G4int Z,size_t shellIndex) const
214 { 214 {
215 std::map<G4int,std::vector<G4RDFluoTransitio 215 std::map<G4int,std::vector<G4RDFluoTransition*>,std::less<G4int> >::const_iterator pos;
216 pos = transitionTable.find(Z); 216 pos = transitionTable.find(Z);
217 if (pos!= transitionTable.end()) 217 if (pos!= transitionTable.end())
218 { 218 {
219 std::vector<G4RDFluoTransition*> v = (*p 219 std::vector<G4RDFluoTransition*> v = (*pos).second;
220 if (shellIndex < v.size()) return(v[shel 220 if (shellIndex < v.size()) return(v[shellIndex]);
221 else { 221 else {
222 G4Exception("G4RDAtomicTransitionManager::Re 222 G4Exception("G4RDAtomicTransitionManager::ReachableShell()",
223 "InvalidCondition", FatalE 223 "InvalidCondition", FatalException,
224 "Reachable shell not found 224 "Reachable shell not found!");
225 return 0; 225 return 0;
226 } 226 }
227 } 227 }
228 else{ 228 else{
229 G4cout << "G4AtomicTransitionMagare warnin 229 G4cout << "G4AtomicTransitionMagare warning: No fluorescence or Auger for Z=" << Z << G4endl;
230 G4cout << "Absorbed enrgy deposited locall 230 G4cout << "Absorbed enrgy deposited locally" << G4endl;
231 231
232 // G4Exception("G4RDAtomicTransitionMan 232 // G4Exception("G4RDAtomicTransitionManager:Z not found");
233 return 0; 233 return 0;
234 } 234 }
235 } 235 }
236 236
237 const G4RDAugerTransition* G4RDAtomicTransitio 237 const G4RDAugerTransition* G4RDAtomicTransitionManager::ReachableAugerShell(G4int Z, G4int vacancyShellIndex) const
238 { 238 {
239 239
240 G4RDAugerTransition* augerTransition = auger 240 G4RDAugerTransition* augerTransition = augerData->GetAugerTransition(Z,vacancyShellIndex);
241 return augerTransition; 241 return augerTransition;
242 } 242 }
243 243
244 244
245 245
246 G4int G4RDAtomicTransitionManager::NumberOfShe 246 G4int G4RDAtomicTransitionManager::NumberOfShells (G4int Z) const
247 { 247 {
248 248
249 std::map<G4int,std::vector<G4RDAtomicShell*>,s 249 std::map<G4int,std::vector<G4RDAtomicShell*>,std::less<G4int> >::const_iterator pos;
250 250
251 pos = shellTable.find(Z); 251 pos = shellTable.find(Z);
252 252
253 if (pos!= shellTable.end()){ 253 if (pos!= shellTable.end()){
254 254
255 std::vector<G4RDAtomicShell*> v = (*pos).s 255 std::vector<G4RDAtomicShell*> v = (*pos).second;
256 256
257 return v.size(); 257 return v.size();
258 } 258 }
259 259
260 else{ 260 else{
261 G4cout << "G4AtomicTransitionMagare warnin 261 G4cout << "G4AtomicTransitionMagare warning: No fluorescence or Auger for Z=" << Z << G4endl;
262 G4cout << "Absorbed enrgy deposited locall 262 G4cout << "Absorbed enrgy deposited locally" << G4endl;
263 263
264 // G4Exception("G4RDAtomicTransitionMan 264 // G4Exception("G4RDAtomicTransitionManager:Z not found");
265 return 0; 265 return 0;
266 } 266 }
267 } 267 }
268 268
269 // This function returns the number of possibl 269 // This function returns the number of possible radiative transitions for the atom with atomic number Z
270 // i.e. the number of shell in wich a vacancy 270 // i.e. the number of shell in wich a vacancy can be filled with a radiative transition
271 271
272 G4int G4RDAtomicTransitionManager::NumberOfRea 272 G4int G4RDAtomicTransitionManager::NumberOfReachableShells(G4int Z) const
273 { 273 {
274 std::map<G4int,std::vector<G4RDFluoTransition* 274 std::map<G4int,std::vector<G4RDFluoTransition*>,std::less<G4int> >::const_iterator pos;
275 275
276 pos = transitionTable.find(Z); 276 pos = transitionTable.find(Z);
277 277
278 if (pos!= transitionTable.end()) 278 if (pos!= transitionTable.end())
279 { 279 {
280 std::vector<G4RDFluoTransition*> v = (*p 280 std::vector<G4RDFluoTransition*> v = (*pos).second;
281 return v.size(); 281 return v.size();
282 } 282 }
283 else 283 else
284 { 284 {
285 G4cout << "G4AtomicTransitionMagare warn 285 G4cout << "G4AtomicTransitionMagare warning: No fluorescence or Auger for Z=" << Z << G4endl;
286 G4cout << "Absorbed enrgy deposited loca 286 G4cout << "Absorbed enrgy deposited locally" << G4endl;
287 287
288 // G4Exception("G4RDAtomicTransitionM 288 // G4Exception("G4RDAtomicTransitionManager:Z not found");
289 return 0; 289 return 0;
290 } 290 }
291 } 291 }
292 292
293 // This function returns the number of possibl 293 // This function returns the number of possible NON-radiative transitions for the atom with atomic number Z
294 // i.e. the number of shell in wich a vacancy 294 // i.e. the number of shell in wich a vacancy can be filled with a NON-radiative transition
295 295
296 G4int G4RDAtomicTransitionManager::NumberOfRea 296 G4int G4RDAtomicTransitionManager::NumberOfReachableAugerShells(G4int Z)const
297 { 297 {
298 G4int n = augerData->NumberOfVacancies(Z); 298 G4int n = augerData->NumberOfVacancies(Z);
299 return n; 299 return n;
300 } 300 }
301 301
302 302
303 303
304 G4double G4RDAtomicTransitionManager::TotalRad 304 G4double G4RDAtomicTransitionManager::TotalRadiativeTransitionProbability(G4int Z,
305 size_t shellIndex) 305 size_t shellIndex)
306 306
307 { 307 {
308 std::map<G4int,std::vector<G4RDFluoTransition* 308 std::map<G4int,std::vector<G4RDFluoTransition*>,std::less<G4int> >::iterator pos;
309 309
310 pos = transitionTable.find(Z); 310 pos = transitionTable.find(Z);
311 311
312 if (pos!= transitionTable.end()) 312 if (pos!= transitionTable.end())
313 { 313 {
314 std::vector<G4RDFluoTransition*> v = (*p 314 std::vector<G4RDFluoTransition*> v = (*pos).second;
315 315
316 if (shellIndex < v.size()) 316 if (shellIndex < v.size())
317 { 317 {
318 G4RDFluoTransition* transition = v[shellInde 318 G4RDFluoTransition* transition = v[shellIndex];
319 G4DataVector transProb = transition->Transit 319 G4DataVector transProb = transition->TransitionProbabilities();
320 G4double totalRadTransProb = 0; 320 G4double totalRadTransProb = 0;
321 321
322 for (size_t j = 0; j<transProb.size(); j++) 322 for (size_t j = 0; j<transProb.size(); j++) // AM -- corrected, it was 1
323 { 323 {
324 totalRadTransProb = totalRadTransProb + tr 324 totalRadTransProb = totalRadTransProb + transProb[j];
325 } 325 }
326 return totalRadTransProb; 326 return totalRadTransProb;
327 327
328 } 328 }
329 else { 329 else {
330 G4Exception("G4RDAtomicTransitionManager 330 G4Exception("G4RDAtomicTransitionManager::TotalRadiativeTransitionProbability()",
331 "InvalidCondition", FatalExc 331 "InvalidCondition", FatalException, "Shell not found!" );
332 return 0; 332 return 0;
333 333
334 } 334 }
335 } 335 }
336 else{ 336 else{
337 G4cout << "G4AtomicTransitionMagare warnin 337 G4cout << "G4AtomicTransitionMagare warning: No fluorescence or Auger for Z=" << Z << G4endl;
338 G4cout << "Absorbed enrgy deposited locall 338 G4cout << "Absorbed enrgy deposited locally" << G4endl;
339 339
340 // G4Exception("G4RDAtomicTransitionMan 340 // G4Exception("G4RDAtomicTransitionManager:Z not found");
341 341
342 return 0; 342 return 0;
343 } 343 }
344 } 344 }
345 345
346 G4double G4RDAtomicTransitionManager::TotalNon 346 G4double G4RDAtomicTransitionManager::TotalNonRadiativeTransitionProbability(G4int Z, size_t shellIndex)
347 347
348 { 348 {
349 349
350 std::map<G4int,std::vector<G4RDFluoTransitio 350 std::map<G4int,std::vector<G4RDFluoTransition*>,std::less<G4int> >::iterator pos;
351 351
352 pos = transitionTable.find(Z); 352 pos = transitionTable.find(Z);
353 353
354 if (pos!= transitionTable.end()){ 354 if (pos!= transitionTable.end()){
355 355
356 std::vector<G4RDFluoTransition*> v = (*pos 356 std::vector<G4RDFluoTransition*> v = (*pos).second;
357 357
358 358
359 if (shellIndex<v.size()){ 359 if (shellIndex<v.size()){
360 360
361 G4RDFluoTransition* transition=v[shellIn 361 G4RDFluoTransition* transition=v[shellIndex];
362 G4DataVector transProb = transition->Tra 362 G4DataVector transProb = transition->TransitionProbabilities();
363 G4double totalRadTransProb = 0; 363 G4double totalRadTransProb = 0;
364 364
365 for(size_t j = 0; j<transProb.size(); j+ 365 for(size_t j = 0; j<transProb.size(); j++) // AM -- Corrected, was 1
366 { 366 {
367 totalRadTransProb = totalRadTransProb + tr 367 totalRadTransProb = totalRadTransProb + transProb[j];
368 } 368 }
369 369
370 G4double totalNonRadTransProb= (1 - tota 370 G4double totalNonRadTransProb= (1 - totalRadTransProb);
371 371
372 return totalNonRadTransProb; } 372 return totalNonRadTransProb; }
373 373
374 else { 374 else {
375 G4Exception("G4RDAtomicTransitionManager 375 G4Exception("G4RDAtomicTransitionManager::TotalNonRadiativeTransitionProbability()",
376 "InvalidCondition", FatalExc 376 "InvalidCondition", FatalException, "Shell not found!");
377 return 0; 377 return 0;
378 } 378 }
379 } 379 }
380 else{ 380 else{
381 G4cout << "G4AtomicTransitionMagare warnin 381 G4cout << "G4AtomicTransitionMagare warning: No fluorescence or Auger for Z=" << Z << G4endl;
382 G4cout << "Absorbed enrgy deposited locall 382 G4cout << "Absorbed enrgy deposited locally" << G4endl;
383 383
384 // G4Exception("G4RDAtomicTransitionMan 384 // G4Exception("G4RDAtomicTransitionManager:Z not found");
385 return 0; 385 return 0;
386 } 386 }
387 } 387 }
388 388
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