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Geant4/examples/advanced/dna/moleculardna/src/EventAction.cc

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Diff markup

Differences between /examples/advanced/dna/moleculardna/src/EventAction.cc (Version 11.3.0) and /examples/advanced/dna/moleculardna/src/EventAction.cc (Version 9.2.p1)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 //                                                
 27 /// file:                                         
 28 /// brief:                                        
 29 #include "EventAction.hh"                         
 30                                                   
 31 #include "AnalysisManager.hh"                     
 32 #include "ChromosomeHit.hh"                       
 33 #include "ChromosomeMapper.hh"                    
 34 #include "DNAGeometry.hh"                         
 35 #include "DNAHit.hh"                              
 36 #include "DetectorConstruction.hh"                
 37                                                   
 38 #include "G4RunManager.hh"                        
 39                                                   
 40 //....oooOO0OOooo........oooOO0OOooo........oo    
 41                                                   
 42 EventAction::EventAction(AnalysisManager* man)    
 43                                                   
 44 //....oooOO0OOooo........oooOO0OOooo........oo    
 45                                                   
 46 void EventAction::Initialize()                    
 47 {                                                 
 48   // Get DNA Geometry                             
 49   const auto* det = dynamic_cast<const Detecto    
 50     G4RunManager::GetRunManager()->GetUserDete    
 51   fDNAGeometry = det->GetDNAGeometry();           
 52                                                   
 53   // Prepare Chromo Hits Map                      
 54   std::vector<G4String> keys = fDNAGeometry->G    
 55   for (const auto& key : keys) {                  
 56     uint32_t key_i = G4::hashing::crc32::Hash(    
 57     fChromoHitMap[key_i] = nullptr;               
 58   }                                               
 59   fInitialized = true;                            
 60 }                                                 
 61                                                   
 62 //....oooOO0OOooo........oooOO0OOooo........oo    
 63                                                   
 64 void EventAction::BeginOfEventAction(const G4E    
 65 {                                                 
 66   if (!fInitialized) {                            
 67     Initialize();                                 
 68   }                                               
 69                                                   
 70   fEdepCell = 0;                                  
 71   fTraLenCell = 0;                                
 72   fTraLenChro = 0;                                
 73                                                   
 74   // Prepare DNA Hits vector                      
 75   fDNAHits.reserve(10000);                        
 76                                                   
 77   std::vector<G4String> keys = fDNAGeometry->G    
 78   // ChromosomeHit* theHit;                       
 79   for (const auto& it : keys) {                   
 80     uint32_t key_i = G4::hashing::crc32::Hash(    
 81     fChromoHitMap[key_i] = new ChromosomeHit(i    
 82   }                                               
 83 }                                                 
 84                                                   
 85 //....oooOO0OOooo........oooOO0OOooo........oo    
 86                                                   
 87 void EventAction::EndOfEventAction(const G4Eve    
 88 {                                                 
 89   // post-analysis                                
 90   fAnalysisManager->ProcessPrimary(fprimstoppo    
 91   fAnalysisManager->ProcessDNAHitsVector(fDNAH    
 92   fAnalysisManager->ProcessChromosomeHitMap(fC    
 93   fAnalysisManager->ProcessCellEdep(fEdepCell)    
 94                                                   
 95   // destruction /////////////////////////////    
 96   for (auto& it : fChromoHitMap) {                
 97     delete it.second;                             
 98   }                                               
 99                                                   
100   for (auto& fDNAHit : fDNAHits) {                
101     delete fDNAHit;                               
102   }                                               
103   fDNAHits.clear();                               
104 }                                                 
105                                                   
106 //....oooOO0OOooo........oooOO0OOooo........oo    
107                                                   
108 void EventAction::AddChromosomeEdep(const G4St    
109 {                                                 
110   uint32_t key_i = G4::hashing::crc32::Hash(ke    
111   auto it = fChromoHitMap.find(key_i);            
112   if (it != fChromoHitMap.end()) {                
113     if (isDNA) {                                  
114       it->second->AddDNAEdep(e);                  
115     }                                             
116     else {                                        
117       it->second->AddChromosomeEdep(e);           
118     }                                             
119   }                                               
120   else {                                          
121     G4ExceptionDescription errmsg;                
122     errmsg << "Energy deposit in unknown chrom    
123     G4Exception("EventAction::AddChromosomeEde    
124   }                                               
125 }                                                 
126 // 2600754154                                     
127 //....oooOO0OOooo........oooOO0OOooo........oo    
128                                                   
129 void EventAction::AddCellEdep(const G4double&     
130 {                                                 
131   fEdepCell += edep;                              
132 }                                                 
133                                                   
134 //....oooOO0OOooo........oooOO0OOooo........oo    
135                                                   
136 void EventAction::AddTrackLengthCell(const G4d    
137 {                                                 
138   fTraLenCell += tl;                              
139 }                                                 
140                                                   
141 //....oooOO0OOooo........oooOO0OOooo........oo    
142                                                   
143 void EventAction::AddTrackLengthChro(const G4d    
144 {                                                 
145   fTraLenChro += tl;                              
146 }                                                 
147                                                   
148 //....oooOO0OOooo........oooOO0OOooo........oo    
149