| Geant4 Cross Reference |
1 #---------------------------------------# 1 #---------------------------------------#
2 #-------------Select Phantom------------# 2 #-------------Select Phantom------------#
3 #---------------------------------------# 3 #---------------------------------------#
4 # Choose phantom sex (male or female) 4 # Choose phantom sex (male or female)
5 /phantom/setPhantomSex female 5 /phantom/setPhantomSex female
6 /phantom/setScoreWriterSex female 6 /phantom/setScoreWriterSex female
7 7
8 # Choose phantom section (head, trunk or full) 8 # Choose phantom section (head, trunk or full)
9 /phantom/setPhantomSection full 9 /phantom/setPhantomSection full
10 /phantom/setScoreWriterSection full 10 /phantom/setScoreWriterSection full
11 11
12 #---------------------------------------# 12 #---------------------------------------#
13 #------------Initialization-------------# 13 #------------Initialization-------------#
14 #---------------------------------------# 14 #---------------------------------------#
15 /run/initialize 15 /run/initialize
16 16
17 /control/verbose 1 17 /control/verbose 1
18 /tracking/verbose 0 18 /tracking/verbose 0
19 /run/verbose 0 19 /run/verbose 0
20 /event/verbose 0 20 /event/verbose 0
21 21
22 #---------------------------------------# 22 #---------------------------------------#
23 #-------------Visualisation-------------# 23 #-------------Visualisation-------------#
24 #---------------------------------------# 24 #---------------------------------------#
25 # Visualize Phantom with OPENGL 25 # Visualize Phantom with OPENGL
26 # /control/execute openGLVis.mac 26 # /control/execute openGLVis.mac
27 # 27 #
28 #---------------------------------------# 28 #---------------------------------------#
29 #---------Radiation Environment---------# 29 #---------Radiation Environment---------#
30 #---------------------------------------# 30 #---------------------------------------#
31 # Call upon definition of primary beam 31 # Call upon definition of primary beam
32 /control/execute primary.mac 32 /control/execute primary.mac
33 # 33 #
34 #---------------------------------------# 34 #---------------------------------------#
35 #------Create Phantom Scoring Mesh------# 35 #------Create Phantom Scoring Mesh------#
36 #---------------------------------------# 36 #---------------------------------------#
37 37
38 /score/create/boxMesh PhantomMesh 38 /score/create/boxMesh PhantomMesh
39 39
40 ############################################## 40 #################################################################################
41 # 41 # #
42 # The phantom voxels have dimensions (x,y,z) = 42 # The phantom voxels have dimensions (x,y,z) = (1.775, 1.775, 4.84)mm #
43 # and there are 299 voxels along x, 137 along 43 # and there are 299 voxels along x, 137 along y and 348 along z in #
44 # the full phantom. Mesh dimensions, however, 44 # the full phantom. Mesh dimensions, however, are to be specified as #
45 # half-lengths. 45 # half-lengths. #
46 # 46 # #
47 # If the user is not building all 348 z-slices 47 # If the user is not building all 348 z-slices of the phantom, has to change #
48 # the boxSize in z and the nBins in z to match 48 # the boxSize in z and the nBins in z to match the geometry of #
49 # the phantom in which they have simulated. Be 49 # the phantom in which they have simulated. Below, the mesh is defined for #
50 # the fully constructed female phantom with 34 50 # the fully constructed female phantom with 348 single slices in z. #
51 # 51 # #
52 ############################################## 52 #################################################################################
53 53
54 /score/mesh/boxSize 265.3625 121.5875 842.16 m 54 /score/mesh/boxSize 265.3625 121.5875 842.16 mm
55 /score/mesh/nBin 299 137 348 55 /score/mesh/nBin 299 137 348
56 /score/mesh/translate/xyz 0. 0. 0. mm 56 /score/mesh/translate/xyz 0. 0. 0. mm
57 57
58 # Choose the quantity to score via mesh 58 # Choose the quantity to score via mesh
59 /score/quantity/energyDeposit energyDeposit 59 /score/quantity/energyDeposit energyDeposit
60 60
61 # Close Scorer 61 # Close Scorer
62 /score/close 62 /score/close
63 /score/list 63 /score/list
64 # 64 #
65 #---------------------------------------# 65 #---------------------------------------#
66 #----------Run Beam-On Command----------# 66 #----------Run Beam-On Command----------#
67 #---------------------------------------# 67 #---------------------------------------#
68 # Chooose number of events 68 # Chooose number of events
69 /run/beamOn 1000 69 /run/beamOn 1000
70 # 70 #
71 #---------------------------------------# 71 #---------------------------------------#
72 #-------Visualising Scoring Mesh--------# 72 #-------Visualising Scoring Mesh--------#
73 #---------------------------------------# 73 #---------------------------------------#
74 # You can also enter the below commands in the 74 # You can also enter the below commands in the GUI
75 # when running the simulation in interactive m 75 # when running the simulation in interactive mode
76 # 76 #
77 #/score/drawProjection PhantomMesh energyDepos 77 #/score/drawProjection PhantomMesh energyDeposit
78 #/score/drawProjection PhantomMesh doseDeposit 78 #/score/drawProjection PhantomMesh doseDeposit
79 79
80 #---------------------------------------# 80 #---------------------------------------#
81 #----Dump Scoring Mesh Data to File-----# 81 #----Dump Scoring Mesh Data to File-----#
82 #---------------------------------------# 82 #---------------------------------------#
83 /score/dumpQuantityToFile PhantomMesh energyDe 83 /score/dumpQuantityToFile PhantomMesh energyDeposit PhantomMesh_Edep.txt
84 84